CmoCh08G000900 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G000900
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Histone superfamily protein
Location	Cmo_Chr08 : 468629 .. 469039 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGTACTAAGCAAACTGCTCGTAAATCCACCGGCGGTAAGGCTCCGAGGAAGCAGTTAGCGACGAAGGCCGCTCGGAAATCAGCTCCTGCAACGGGAGGAGTGAAGAAGCCGCATAGATTTAGGCCGGGAACGGTGGCGCTGAGAGAAATTAGAAAGTACCAGAAGAGCACCGAGCTTCTAATCCGCAAGCTTCCGTTCCAGCGGCTCGTTAGAGAGATCGCTCAGGACTTCAAGACCGATCTCCGGTTCCAAAGCAGCGCCGTAGCAGCGTTGCAGGAGGCGGCAGAAGCCTATCTCGTCGGATTGTTCGAGGATACTAACCTCTGCGCAATTCATGCTAAGAGAGTTACGATTATGCCGAAGGATATTCAATTGGCGAGGAGAATTAGAGGCGAGAGAGCTTAG

mRNA sequence

ATGGCTCGTACTAAGCAAACTGCTCGTAAATCCACCGGCGGTAAGGCTCCGAGGAAGCAGTTAGCGACGAAGGCCGCTCGGAAATCAGCTCCTGCAACGGGAGGAGTGAAGAAGCCGCATAGATTTAGGCCGGGAACGGTGGCGCTGAGAGAAATTAGAAAGTACCAGAAGAGCACCGAGCTTCTAATCCGCAAGCTTCCGTTCCAGCGGCTCGTTAGAGAGATCGCTCAGGACTTCAAGACCGATCTCCGGTTCCAAAGCAGCGCCGTAGCAGCGTTGCAGGAGGCGGCAGAAGCCTATCTCGTCGGATTGTTCGAGGATACTAACCTCTGCGCAATTCATGCTAAGAGAGTTACGATTATGCCGAAGGATATTCAATTGGCGAGGAGAATTAGAGGCGAGAGAGCTTAG

Coding sequence (CDS)

ATGGCTCGTACTAAGCAAACTGCTCGTAAATCCACCGGCGGTAAGGCTCCGAGGAAGCAGTTAGCGACGAAGGCCGCTCGGAAATCAGCTCCTGCAACGGGAGGAGTGAAGAAGCCGCATAGATTTAGGCCGGGAACGGTGGCGCTGAGAGAAATTAGAAAGTACCAGAAGAGCACCGAGCTTCTAATCCGCAAGCTTCCGTTCCAGCGGCTCGTTAGAGAGATCGCTCAGGACTTCAAGACCGATCTCCGGTTCCAAAGCAGCGCCGTAGCAGCGTTGCAGGAGGCGGCAGAAGCCTATCTCGTCGGATTGTTCGAGGATACTAACCTCTGCGCAATTCATGCTAAGAGAGTTACGATTATGCCGAAGGATATTCAATTGGCGAGGAGAATTAGAGGCGAGAGAGCTTAG

Homology

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BLAST of CmoCh08G000900 vs. Swiss-Prot
Match: H32_ARATH (Histone H3.2 OS=Arabidopsis thaliana GN=HTR2 PE=1 SV=2)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. Swiss-Prot
Match: H32_ASPOF (Histone H3.2 OS=Asparagus officinalis PE=2 SV=3)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. Swiss-Prot
Match: H32_BRANA (Histone H3.2 OS=Brassica napus PE=2 SV=3)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. Swiss-Prot
Match: H32_EUPES (Histone H3.2 OS=Euphorbia esula GN=H3 PE=2 SV=3)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. Swiss-Prot
Match: H32_PETCR (Histone H3.2 OS=Petroselinum crispum GN=H3-7 PE=3 SV=2)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. TrEMBL
Match: Q71CZ4_OROCE (Histone H3 OS=Orobanche cernua var. cumana PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. TrEMBL
Match: K3YE80_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_012541mg PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 52  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 111

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 112 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 171

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 172 MPKDIQLARRIRGERA 187

[Close]

BLAST of CmoCh08G000900 vs. TrEMBL
Match: A0A096TZU4_MAIZE (Histone H3.2 OS=Zea mays GN=H3C4 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 110 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 169

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 170 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 229

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 230 MPKDIQLARRIRGERA 245

[Close]

BLAST of CmoCh08G000900 vs. TrEMBL
Match: K3ZAN5_SETIT (Histone H3 OS=Setaria italica GN=SETIT_007481mg PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. TrEMBL
Match: M5WKJ0_PRUPE (Histone H3 OS=Prunus persica GN=PRUPE_ppa013165mg PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. TAIR10
Match: AT1G09200.1 (AT1G09200.1 Histone superfamily protein)

HSP 1 Score: 253.4 bits (646), Expect = 7.7e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. TAIR10
Match: AT3G27360.1 (AT3G27360.1 Histone superfamily protein)

HSP 1 Score: 253.4 bits (646), Expect = 7.7e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. TAIR10
Match: AT5G10390.1 (AT5G10390.1 Histone superfamily protein)

HSP 1 Score: 253.4 bits (646), Expect = 7.7e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. TAIR10
Match: AT5G10400.1 (AT5G10400.1 Histone superfamily protein)

HSP 1 Score: 253.4 bits (646), Expect = 7.7e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. TAIR10
Match: AT5G65360.1 (AT5G65360.1 Histone superfamily protein)

HSP 1 Score: 253.4 bits (646), Expect = 7.7e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh08G000900 vs. NCBI nr
Match: gi|992271660|gb|KXG31833.1| (hypothetical protein SORBI_003G065000, partial [Sorghum bicolor])

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 87  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 146

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 147 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 206

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 207 MPKDIQLARRIRGERA 222

[Close]

BLAST of CmoCh08G000900 vs. NCBI nr
Match: gi|643697049|gb|KDP20192.1| (hypothetical protein JCGZ_07912 [Jatropha curcas])

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 91  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 150

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 151 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 210

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 211 MPKDIQLARRIRGERA 226

[Close]

BLAST of CmoCh08G000900 vs. NCBI nr
Match: gi|414878180|tpg|DAA55311.1| (TPA: histone H3.2 [Zea mays])

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 110 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 169

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 170 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 229

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 230 MPKDIQLARRIRGERA 245

[Close]

BLAST of CmoCh08G000900 vs. NCBI nr
Match: gi|944232983|gb|KQK97345.1| (hypothetical protein SETIT_012204mg, partial [Setaria italica])

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 182

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 183 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 242

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 243 MPKDIQLARRIRGERA 258

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BLAST of CmoCh08G000900 vs. NCBI nr
Match: gi|922560415|ref|XP_013608483.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC106315288 [Brassica oleracea var. oleracea])

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

The following BLAST results are available for this feature:

BLAST of CmoCh08G000900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
H32_ARATH	1.4e-66	100.00	Histone H3.2 OS=Arabidopsis thaliana GN=HTR2 PE=1 SV=2	[more]
H32_ASPOF	1.4e-66	100.00	Histone H3.2 OS=Asparagus officinalis PE=2 SV=3	[more]
H32_BRANA	1.4e-66	100.00	Histone H3.2 OS=Brassica napus PE=2 SV=3	[more]
H32_EUPES	1.4e-66	100.00	Histone H3.2 OS=Euphorbia esula GN=H3 PE=2 SV=3	[more]
H32_PETCR	1.4e-66	100.00	Histone H3.2 OS=Petroselinum crispum GN=H3-7 PE=3 SV=2	[more]

BLAST of CmoCh08G000900 vs. TrEMBL


Match Name	E-value	Identity	Description
Q71CZ4_OROCE	1.5e-64	100.00	Histone H3 OS=Orobanche cernua var. cumana PE=2 SV=1	[more]
K3YE80_SETIT	1.5e-64	100.00	Uncharacterized protein OS=Setaria italica GN=SETIT_012541mg PE=3 SV=1	[more]
A0A096TZU4_MAIZE	1.5e-64	100.00	Histone H3.2 OS=Zea mays GN=H3C4 PE=3 SV=1	[more]
K3ZAN5_SETIT	1.5e-64	100.00	Histone H3 OS=Setaria italica GN=SETIT_007481mg PE=3 SV=1	[more]
M5WKJ0_PRUPE	1.5e-64	100.00	Histone H3 OS=Prunus persica GN=PRUPE_ppa013165mg PE=3 SV=1	[more]

BLAST of CmoCh08G000900 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09200.1	7.7e-68	100.00	Histone superfamily protein	[more]
AT3G27360.1	7.7e-68	100.00	Histone superfamily protein	[more]
AT5G10390.1	7.7e-68	100.00	Histone superfamily protein	[more]
AT5G10400.1	7.7e-68	100.00	Histone superfamily protein	[more]
AT5G65360.1	7.7e-68	100.00	Histone superfamily protein	[more]

BLAST of CmoCh08G000900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|992271660\|gb\|KXG31833.1\|	2.2e-64	100.00	hypothetical protein SORBI_003G065000, partial [Sorghum bicolor]	[more]
gi\|643697049\|gb\|KDP20192.1\|	2.2e-64	100.00	hypothetical protein JCGZ_07912 [Jatropha curcas]	[more]
gi\|414878180\|tpg\|DAA55311.1\|	2.2e-64	100.00	TPA: histone H3.2 [Zea mays]	[more]
gi\|944232983\|gb\|KQK97345.1\|	2.2e-64	100.00	hypothetical protein SETIT_012204mg, partial [Setaria italica]	[more]
gi\|922560415\|ref\|XP_013608483.1\|	2.2e-64	100.00	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC106315288 [Brassica o...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008283	cell proliferation
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009536	plastid
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G000900.1	CmoCh08G000900.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G000900	Lsi08G003440	Bottle gourd (USVL1VR-Ls)	cmolsiB831
CmoCh08G000900	MELO3C011610.2	Melon (DHL92) v3.6.1	cmomedB927
CmoCh08G000900	CsaV3_6G003690	Cucumber (Chinese Long) v3	cmocucB1061
CmoCh08G000900	Cla97C08G147440	Watermelon (97103) v2	cmowmbB908
CmoCh08G000900	Bhi04G001649	Wax gourd	cmowgoB1114
CmoCh08G000900	CsGy6G003390	Cucumber (Gy14) v2	cgybcmoB860
CmoCh08G000900	Carg04914	Silver-seed gourd	carcmoB0119

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G000900	Cucurbita moschata (Rifu)	cmocmoB323
CmoCh08G000900	Cucurbita maxima (Rimu)	cmacmoB378
CmoCh08G000900	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G000900	Watermelon (Charleston Gray)	cmowcgB811
CmoCh08G000900	Watermelon (97103) v1	cmowmB850
CmoCh08G000900	Cucurbita pepo (Zucchini)	cmocpeB842
CmoCh08G000900	Cucurbita pepo (Zucchini)	cmocpeB851
CmoCh08G000900	Silver-seed gourd	carcmoB0309