CmoCh07G009670 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGAGAGTGAACAGGAAGGAAATCATAGGGCGAAGAGAAAGAAGAAGATATTCCTTTCTTTACGGGAGAGTCAATTCGTCATAGAAAGAAGGAACCTGCTTTCTACTATAGATGATCGAGAAAGAATCAATCTCTTCCGAACGACCGATGGCTTGGTAAGCAAGCAACCTGTTATGTAGGCCCCAACTCCAAGTTCTTTCTCTTCTTTCTTTTTGAGTTTAGTGAGAGTGAATCAAAACAATTGTCCAAGATTGCGTCATCGAGCACGCGACGCGCATAGTCTGAAGGGTTGTCTCCTCTTCAACATTTCGACTACTACTTACTTGCCTTCCCTTTTCAGAGATCTCCTTGTTCTCTTCCCAGATTTGACTCGATTTCATTAGTTCATAAGAATCAGTACCAAAGGAATGAATCAAAGATAGAAAGAAAAAGGCTATCCATCCTCAGCCGTATAGGGAAGAGAGGGAAAACTGTCTTTCTTTGTCGGAAATGATGATGCGTATGTAACTCCACAGTAAGAAAAGTGGATTCTTTGATATTTGCTTTCTGTATTATTTCGAAATTCAAGGATTAATTAATGAACAGGGAATGGATGAATAATAGTATCCATATAACTTTACATAGAACTTATGTTTGATATAAATATTAGTAGTGTAGATGTAGAGAGGTAACGAATGAAGTGAGTTACCACCGGAGGCAAGGGTAGGCGGAAGACAGGGGGTTTGTAGGGAACTACTAAGGGAACTACTATTTGGAGGGAACTGCTAAGAGAACTACTAAGGGAACTACTAAGGGAACTACTATTTGGAGGGAACTGCTAAGAGAACTACTAAGGGAACTACTAAGGGAACTACTAAAGGGATGTGCATAAAAAGGTCTGTATTTGCCCGCGAAAACGACGACCGGGAAAAGCAAAACGAAATTAGGATTTGGCCGAAAAAGAAGCAAGACTATGGATACCATGACCGATCACCATCGAGAAAGAAGAATCTTTCTAAATCACTTCGCGTCAGCGGGGCCTTCAAGCATCCGAAATATGCCGGAGTT ATGAATGAGAGTGAACAGGAAGGAAATCATAGGGCGAAGAGAAAGAAGAAGATATTCCTTTCTTTACGGGAGAGTCAATTCGTCATAGAAAGAAGGAACCTGCTTTCTACTATAGATGATCGAGAAAGAATCAATCTCTTCCGAACGACCGATGGCTTGGTAAGCAAGCAACCTGTTATGTCTGTATTTGCCCGCGAAAACGACGACCGGGAAAAGCAAAACGAAATTAGGATTTGGCCGAAAAAGAAGCAAGACTATGGATACCATGACCGATCACCATCGAGAAAGAAGAATCTTTCTAAATCACTTCGCGTCAGCGGGGCCTTCAAGCATCCGAAATATGCCGGAGTT ATGAATGAGAGTGAACAGGAAGGAAATCATAGGGCGAAGAGAAAGAAGAAGATATTCCTTTCTTTACGGGAGAGTCAATTCGTCATAGAAAGAAGGAACCTGCTTTCTACTATAGATGATCGAGAAAGAATCAATCTCTTCCGAACGACCGATGGCTTGGTAAGCAAGCAACCTGTTATGTCTGTATTTGCCCGCGAAAACGACGACCGGGAAAAGCAAAACGAAATTAGGATTTGGCCGAAAAAGAAGCAAGACTATGGATACCATGACCGATCACCATCGAGAAAGAAGAATCTTTCTAAATCACTTCGCGTCAGCGGGGCCTTCAAGCATCCGAAATATGCCGGAGTT
BLAST of CmoCh07G009670 vs. Swiss-Prot
Match: RT03_OENBE (Ribosomal protein S3, mitochondrial OS=Oenothera berteroana GN=RPS3 PE=3 SV=2) HSP 1 Score: 99.8 bits (247), Expect = 2.2e-20 Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. Swiss-Prot
Match: RT03_PETHY (Ribosomal protein S3, mitochondrial OS=Petunia hybrida GN=YRPS3 PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 2.8e-20 Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. Swiss-Prot
Match: RT03_ORYSJ (Ribosomal protein S3, mitochondrial OS=Oryza sativa subsp. japonica GN=RPS3 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.1e-19 Identity = 47/52 (90.38%), Postives = 48/52 (92.31%), Query Frame = 1
BLAST of CmoCh07G009670 vs. Swiss-Prot
Match: RT03_MAIZE (Ribosomal protein S3, mitochondrial OS=Zea mays GN=RPS3 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.4e-19 Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 1
BLAST of CmoCh07G009670 vs. Swiss-Prot
Match: RT03_BRANA (Ribosomal protein S3, mitochondrial OS=Brassica napus GN=RPS3 PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 5.9e-18 Identity = 43/50 (86.00%), Postives = 46/50 (92.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. TrEMBL
Match: E5DM03_CUCPE (Ribosomal protein S3 (Fragment) OS=Cucurbita pepo GN=rps3 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.4e-20 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. TrEMBL
Match: D5I3F1_CUCPE (Ribosomal protein S3 OS=Cucurbita pepo GN=rps3 PE=3 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.2e-19 Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. TrEMBL
Match: M9WG71_LIRTU (Ribosomal protein S3 OS=Liriodendron tulipifera GN=rps3 PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 3.7e-19 Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. TrEMBL
Match: E5DM98_9MAGN (Ribosomal protein S3 (Fragment) OS=Meliosma squamulata GN=rps3 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 3.7e-19 Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. TrEMBL
Match: E5DM19_DRIWI (Ribosomal protein S3 (Fragment) OS=Drimys winteri GN=rps3 PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 3.7e-19 Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. TAIR10
Match: ATMG00090.1 (ATMG00090.1 structural constituent of ribosome;protein binding) HSP 1 Score: 92.0 bits (227), Expect = 2.5e-19 Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. NCBI nr
Match: gi|302748681|gb|ADL63821.1| (ribosomal protein S3, partial (mitochondrion) [Cucurbita pepo]) HSP 1 Score: 105.5 bits (262), Expect = 6.3e-20 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. NCBI nr
Match: gi|295311706|ref|YP_003587365.1| (ribosomal protein S3 [Cucurbita pepo]) HSP 1 Score: 103.2 bits (256), Expect = 3.1e-19 Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. NCBI nr
Match: gi|25987150|gb|AAN75747.1|AF319171_2 (ribosomal protein S3 [Magnolia x soulangeana]) HSP 1 Score: 102.4 bits (254), Expect = 5.3e-19 Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. NCBI nr
Match: gi|302748796|gb|ADL63878.1| (ribosomal protein S3, partial (mitochondrion) [Hydrangea arborescens]) HSP 1 Score: 102.4 bits (254), Expect = 5.3e-19 Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 1
BLAST of CmoCh07G009670 vs. NCBI nr
Match: gi|484759966|ref|YP_007905727.1| (ribosomal protein S3 (mitochondrion) [Liriodendron tulipifera]) HSP 1 Score: 102.4 bits (254), Expect = 5.3e-19 Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |