CmoCh07G008530 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G008530
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ribosome biogenesis NSA2
Location	Cmo_Chr07 : 4031088 .. 4033079 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGACGATTTCCCTCTTTCCTCCAACGCAGGAACGTGCCCCGGTTGGGTTTACATTTTGAGAGAGAGCTTTCGTCTTCGTTAACTCTAGGGTTTATCTTCTGCAAACAATCCGGCGGCGATTGTAACTTTTCGCCATGGTCTGCTGCTCTCCAGCTCATTAACTTAATGTTTATATGGTTCCAGATTTTTGTCGTTTAATCTTGTTGGTTTTTCGTTTGTGGTTTAACAGCCGCAGGGAGATTACATTGAGCTTCATAGGAAGCGACATGGCTACCGCCATGACCACTTTGAGCGGAAGCGCAAGAAGGAGGCTCGTGAAGTTCACAAACGATCTGCCATGGCTCAGAAGGTTGGTTTCAGTTACTTCTGTTAGTTTCCTCTTCTTTTTGAGTGTTCGATTTGGTTGATTATGCCGTTTCCTTTCTGATCGAATTTGAATCTTGCAGGCTCTGGGTATTAAGGGTAAGATGTTCGCGAAGAAACGATATGCGGAGAAGGCTTTGATGAAGAAAACGTGAGTATCTTTTGTTCATTCTTTTGAAATTATGTTACGGCGTTGATGCCTTTGATTGAAACTTGTTCTATCTTTTGTGTTTTAATGGACTTTTTATGGTTTAATGTTTATCCTTCTGTCAATGCTTTATAGTGCATTTGGGATTTGCTATAATAGGCTGGAGTTGTAGTTTCGATAATTGTTCAATATCTTATGGAGCATTTGGTATTTGCTATGGTAGATTAGAGCTGCAATAGTTTAGATAAATGAAGTGGCACACACTTGATTAGAGCTGCAATAATTTCATTAATGCTTGTTTGGTGAAATGAAATGAGGGTTAGATTGACAAATGCCGTATGTTTGTTTCAACAGATTGGCTATGCATGAGGAGTCTTCAAGTAGACGCAAGGTCGATGATGATGTTCAAGAAGGTGCTGTTCCTGCCTATCTTTTGGATCGTGAAAATACAGCTCGAGCGAAAGTATGCAATATTCGAACTCTTTTTTGAACTTCAGGCATGTAGTTTTTTGCATTCATTTGTTTTGATCTGACCGTCTGCTGTAAAATAGGTTCTTAGCAACACAATTAAGCAAAAGAGGAAAGAAAAAGCTGGAAAGTGGGAAGTCCCCCTGCCCAAGGTAAGGGCTGTTTATGGCTTTGTATTATGTATCTTTAGTTTTAGAAAATACCATGCCCATCTAGCTGTTGCTATCTTTTGGGGCTGATGATGCATTATTTGTCCTGGATTTTTATTTAGGTCAGGCCTGTTGCTGAGGATGAGATGTTTAAAGTGATAAGAACTGGTAAAAGGAAAAGTAAGTACTCATATCGGCTTCTATCAGTATTTATTTTCTCGAAATTTATGCCGTTACGATCTACGAACTATCAAATCGAACTCATTAATCCATGTCATGTTTACAGCAAAACAATGGAAGAGGATGGTCACAAAAGCTACATTTGTTGGGGCAAGTTTTACACGAAAACCTCCGAAGTACGAGCGATTCATCCGACCATCAGGGCTTCGATTTACAAAAGCACATGTAACACATCCTGAACTTAAATGCACATTCAATCTTGAGATCATTGGAGTGAAGAAAAATCCAAACGGTCCCATGTATACATCTCTTGGTGTCATGACCAAGGGAGCCATTATTGAGGTATCGTGCTCATAACGCTCAACCTCATCACCGTGCACTTCTGTTTCTGATTAGTCACTCACTTATGTCTTCCCTTTAATTGTTAATTAGGTGAATGTCAGTGAATTGGGTTTGGTCACACCAGCTGGGAAAGTAGTATGGGGTAATGATTTTCTTCCTTGTTTTGTAGTTTTGAACAGTTCCCATTGGGATTCTTCCCTGATTTTCATCTGGGATGAAGCTTATTATGTAATGATGCAAATCATTGACATTATTTTGGTTGTGGTTTCTTCAGGGAAGTATGCTCAGGTGACCAATAATCCTGAGAATGATGGCTGTATAAATGCTGTTCTGCTTGTTTAA

mRNA sequence

AGACGATTTCCCTCTTTCCTCCAACGCAGGAACGTGCCCCGGTTGGGTTTACATTTTGAGAGAGAGCTTTCGTCTTCGTTAACTCTAGGGTTTATCTTCTGCAAACAATCCGGCGGCGATTGTAACTTTTCGCCATGCCGCAGGGAGATTACATTGAGCTTCATAGGAAGCGACATGGCTACCGCCATGACCACTTTGAGCGGAAGCGCAAGAAGGAGGCTCGTGAAGTTCACAAACGATCTGCCATGGCTCAGAAGGCTCTGGGTATTAAGGGTAAGATGTTCGCGAAGAAACGATATGCGGAGAAGGCTTTGATGAAGAAAACATTGGCTATGCATGAGGAGTCTTCAAGTAGACGCAAGGTCGATGATGATGTTCAAGAAGGTGCTGTTCCTGCCTATCTTTTGGATCGTGAAAATACAGCTCGAGCGAAAGTTCTTAGCAACACAATTAAGCAAAAGAGGAAAGAAAAAGCTGGAAAGTGGGAAGTCCCCCTGCCCAAGGTCAGGCCTGTTGCTGAGGATGAGATGTTTAAAGTGATAAGAACTGGTAAAAGGAAAACAAAACAATGGAAGAGGATGGTCACAAAAGCTACATTTGTTGGGGCAAGTTTTACACGAAAACCTCCGAAGTACGAGCGATTCATCCGACCATCAGGGCTTCGATTTACAAAAGCACATGTAACACATCCTGAACTTAAATGCACATTCAATCTTGAGATCATTGGAGTGAAGAAAAATCCAAACGGTCCCATGTATACATCTCTTGGTGTCATGACCAAGGGAGCCATTATTGAGGTGAATGTCAGTGAATTGGGTTTGGTCACACCAGCTGGGAAAGTAGTATGGGGTAATGATTTTCTTCCTTGTTTTGTAGTTTTGAACAGTTCCCATTGGGATTCTTCCCTGATTTTCATCTGGGATGAAGCTTATTATGTAATGATGCAAATCATTGACATTATTTTGGTTGTGGTTTCTTCAGGGAAGTATGCTCAGGTGACCAATAATCCTGAGAATGATGGCTGTATAAATGCTGTTCTGCTTGTTTAA

Coding sequence (CDS)

ATGCCGCAGGGAGATTACATTGAGCTTCATAGGAAGCGACATGGCTACCGCCATGACCACTTTGAGCGGAAGCGCAAGAAGGAGGCTCGTGAAGTTCACAAACGATCTGCCATGGCTCAGAAGGCTCTGGGTATTAAGGGTAAGATGTTCGCGAAGAAACGATATGCGGAGAAGGCTTTGATGAAGAAAACATTGGCTATGCATGAGGAGTCTTCAAGTAGACGCAAGGTCGATGATGATGTTCAAGAAGGTGCTGTTCCTGCCTATCTTTTGGATCGTGAAAATACAGCTCGAGCGAAAGTTCTTAGCAACACAATTAAGCAAAAGAGGAAAGAAAAAGCTGGAAAGTGGGAAGTCCCCCTGCCCAAGGTCAGGCCTGTTGCTGAGGATGAGATGTTTAAAGTGATAAGAACTGGTAAAAGGAAAACAAAACAATGGAAGAGGATGGTCACAAAAGCTACATTTGTTGGGGCAAGTTTTACACGAAAACCTCCGAAGTACGAGCGATTCATCCGACCATCAGGGCTTCGATTTACAAAAGCACATGTAACACATCCTGAACTTAAATGCACATTCAATCTTGAGATCATTGGAGTGAAGAAAAATCCAAACGGTCCCATGTATACATCTCTTGGTGTCATGACCAAGGGAGCCATTATTGAGGTGAATGTCAGTGAATTGGGTTTGGTCACACCAGCTGGGAAAGTAGTATGGGGTAATGATTTTCTTCCTTGTTTTGTAGTTTTGAACAGTTCCCATTGGGATTCTTCCCTGATTTTCATCTGGGATGAAGCTTATTATGTAATGATGCAAATCATTGACATTATTTTGGTTGTGGTTTCTTCAGGGAAGTATGCTCAGGTGACCAATAATCCTGAGAATGATGGCTGTATAAATGCTGTTCTGCTTGTTTAA

Homology

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BLAST of CmoCh07G008530 vs. Swiss-Prot
Match: NSA2_DICDI (Ribosome biogenesis protein NSA2 homolog OS=Dictyostelium discoideum GN=nsa2 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.2e-94
Identity = 171/239 (71.55%), Postives = 202/239 (84.52%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQGD+IELH+KR G R DH+E+ RKK AR  HKRSA+AQK  G+K K++ KKRY+EKA 
Sbjct: 1   MPQGDHIELHQKRFGRRLDHYEKVRKKTARAAHKRSAIAQKVTGLKAKLYNKKRYSEKAE 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKT+AMH+E ++++  DD V+EGAVPAYLLDRE  +RAKVLSN +KQKRKEKAGKW+VP
Sbjct: 61  MKKTIAMHQERTNKKASDDKVKEGAVPAYLLDREGVSRAKVLSNMVKQKRKEKAGKWDVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVR ++EDEMFKV+++GKR+ K WKR VTK TFVG  FTRKPPKYERFIRP+GLRF K
Sbjct: 121 LPKVRAISEDEMFKVVKSGKRQKKAWKRFVTKVTFVGEGFTRKPPKYERFIRPTGLRFKK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELK TF L+I+ VKKNP  P YT LGV+TKG I+EVNVS+LGLVT  GKVVWG
Sbjct: 181 AHVTHPELKSTFYLDILSVKKNPQSPTYTQLGVITKGTILEVNVSDLGLVTQTGKVVWG 239

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BLAST of CmoCh07G008530 vs. Swiss-Prot
Match: NSA2_HUMAN (Ribosome biogenesis protein NSA2 homolog OS=Homo sapiens GN=NSA2 PE=1 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 4.2e-92
Identity = 169/239 (70.71%), Postives = 199/239 (83.26%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQ +YIELHRKR+GYR D+ E+KRKKE+RE H+RS  A+K +G+K K++ K+R+AEK  
Sbjct: 1   MPQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQ 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKT+ MHE+ ++++K D+   +GAVPAYLLDRE  +RAKVLSN IKQKRKEKAGKWEVP
Sbjct: 61  MKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVR   E E+ KVIRTGKRK K WKRMVTK  FVG  FTRKPPKYERFIRP GLRF K
Sbjct: 121 LPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELK TF L I+GVKKNP+ P+YT+LGV+TKG +IEVNVSELGLVT  GKV+WG
Sbjct: 181 AHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWG 239

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BLAST of CmoCh07G008530 vs. Swiss-Prot
Match: NSA2_MOUSE (Ribosome biogenesis protein NSA2 homolog OS=Mus musculus GN=Nsa2 PE=2 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 5.5e-92
Identity = 169/239 (70.71%), Postives = 198/239 (82.85%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQ +YIELHRKR+GYR D+ E+KRKKE RE H+RS  A+K +G+K K++ K+R+AEK  
Sbjct: 1   MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQ 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKT+ MHE+ ++++K D+   +GAVPAYLLDRE  +RAKVLSN IKQKRKEKAGKWEVP
Sbjct: 61  MKKTIKMHEKRNTKQKDDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVR   E E+ KVIRTGKRK K WKRMVTK  FVG  FTRKPPKYERFIRP GLRF K
Sbjct: 121 LPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELK TF L I+GVKKNP+ P+YT+LGV+TKG +IEVNVSELGLVT  GKV+WG
Sbjct: 181 AHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWG 239

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BLAST of CmoCh07G008530 vs. Swiss-Prot
Match: NSA2_BOVIN (Ribosome biogenesis protein NSA2 homolog OS=Bos taurus GN=NSA2 PE=2 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 5.5e-92
Identity = 169/239 (70.71%), Postives = 198/239 (82.85%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQ +YIELHRKR+GYR D+ E+KRKKE RE H+RS  A+K +G+K K++ K+R+AEK  
Sbjct: 1   MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQ 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKT+ MHE+ ++++K D+   +GAVPAYLLDRE  +RAKVLSN IKQKRKEKAGKWEVP
Sbjct: 61  MKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVR   E E+ KVIRTGKRK K WKRMVTK  FVG  FTRKPPKYERFIRP GLRF K
Sbjct: 121 LPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELK TF L I+GVKKNP+ P+YT+LGV+TKG +IEVNVSELGLVT  GKV+WG
Sbjct: 181 AHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWG 239

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BLAST of CmoCh07G008530 vs. Swiss-Prot
Match: NSA2_RAT (Ribosome biogenesis protein NSA2 homolog OS=Rattus norvegicus GN=Nsa2 PE=2 SV=2)

HSP 1 Score: 334.7 bits (857), Expect = 1.0e-90
Identity = 166/239 (69.46%), Postives = 197/239 (82.43%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQ +YIELHRKR+GYR D+ E+KRKKE RE H+RS  A+K +G+K K++ K+R+AEK  
Sbjct: 1   MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQ 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKT+ MHE+ ++++K D+   +GAVPAYLLDRE  +RAKVLSN IKQKRKEKAGKWE P
Sbjct: 61  MKKTIKMHEKRNTKQKDDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWESP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVR   E E+ KVIRTGKRK K W+RMVTK  FVG  FTRKPPKYE+FIRP GLRF K
Sbjct: 121 LPKVRAQGETELLKVIRTGKRKKKAWRRMVTKVCFVGDGFTRKPPKYEKFIRPMGLRFKK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELK TF L I+GVKKNP+ P+YT+LGV+TKG +IEVNVSELGLVT  GKV+WG
Sbjct: 181 AHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWG 239

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BLAST of CmoCh07G008530 vs. TrEMBL
Match: A0A0A0KFK2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476730 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 2.8e-127
Identity = 233/239 (97.49%), Postives = 237/239 (99.16%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSA AQKALGIKGKMFAKKRYAEKAL
Sbjct: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSATAQKALGIKGKMFAKKRYAEKAL 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKTLAMHEESSSRRKVDDDVQEGA+PAYLLDRENTARAK+LSNT+KQKRKEKAGKWEVP
Sbjct: 61  MKKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKILSNTVKQKRKEKAGKWEVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGA FTRKPPKYERFIRPSGLRFTK
Sbjct: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGAGFTRKPPKYERFIRPSGLRFTK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+TKGAIIEVNVSELGLVTPAGKVVWG
Sbjct: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGAIIEVNVSELGLVTPAGKVVWG 239

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BLAST of CmoCh07G008530 vs. TrEMBL
Match: A0A067FTA6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024952mg PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.2e-122
Identity = 227/239 (94.98%), Postives = 233/239 (97.49%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQGDYIELHRKR+GYR DHFERKRKKEAREVHKRS +AQKALGIKGKMFAKKRYAEKAL
Sbjct: 1   MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKAL 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKTLAMHEESSSRRKVDD+VQEGAVPAYLLDRENT RAKVLSNTIKQKRKEKAGKWEVP
Sbjct: 61  MKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVRPVAEDEMFKVIR+GKR+TKQWKRMVTKATFVG  FTRKPPKYERFIRPSGLRFTK
Sbjct: 121 LPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+TKG IIEVNVSELGLVTPAGKVVWG
Sbjct: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWG 239

[Close]

BLAST of CmoCh07G008530 vs. TrEMBL
Match: A0A059A5K8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02620 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.2e-122
Identity = 227/239 (94.98%), Postives = 230/239 (96.23%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQGDYIE HRK HGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGK+FAKKRYAEKAL
Sbjct: 53  MPQGDYIERHRKLHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKLFAKKRYAEKAL 112

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKTLAMHEESSSRRKVDDDV EGAVPAYLLDR+ T RAKVLSNTIKQKRKEKAGKWEVP
Sbjct: 113 MKKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRDTTTRAKVLSNTIKQKRKEKAGKWEVP 172

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVG SFTRKPPKYERFIRPSGLRF K
Sbjct: 173 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGPSFTRKPPKYERFIRPSGLRFNK 232

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELKCTFNLEIIGVKKNPNG MYTSLGV+TKG IIEVNVSELGLVTPAGKVVWG
Sbjct: 233 AHVTHPELKCTFNLEIIGVKKNPNGSMYTSLGVLTKGTIIEVNVSELGLVTPAGKVVWG 291

[Close]

BLAST of CmoCh07G008530 vs. TrEMBL
Match: V4T1D5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012509mg PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.7e-122
Identity = 226/239 (94.56%), Postives = 233/239 (97.49%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQGDYIELHRKR+GYR DHFERKRKKEAREVHKRS +AQKALGIKGKMFAKKRYAEKAL
Sbjct: 1   MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKAL 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKTLAMHEESSSRRKVDD+VQEGAVPAYLLDRENT RAKVLSNTIKQKRKEKAGKWEVP
Sbjct: 61  MKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVRPVAEDEMFKVIR+GKR+TKQWKRMVTKATFVG  FTRKPPKYERFIRPSGLRFTK
Sbjct: 121 LPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+TKG IIEVNVSELG+VTPAGKVVWG
Sbjct: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGVVTPAGKVVWG 239

[Close]

BLAST of CmoCh07G008530 vs. TrEMBL
Match: F6H6T1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0105g00280 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 6.1e-122
Identity = 226/239 (94.56%), Postives = 230/239 (96.23%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQGDYI+LHRKRHGYR DHFERKRKKEAREVHKRS +AQKALGIKGKMFAKKRYAEKA 
Sbjct: 1   MPQGDYIDLHRKRHGYRPDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKAQ 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKTLAMHEESSSRRKVDDDV EGAVPAYLLDRE T RAKVLSNTIKQKRKEKAGKWEVP
Sbjct: 61  MKKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRETTTRAKVLSNTIKQKRKEKAGKWEVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVRPVAEDEMFKV+RTGKRKTKQWKRMVTKATFVG +FTRKPPKYERFIRPSGLRFTK
Sbjct: 121 LPKVRPVAEDEMFKVLRTGKRKTKQWKRMVTKATFVGPAFTRKPPKYERFIRPSGLRFTK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELKCTFNLEIIGVKKNPNG MYTSLGVMTKG IIEVNVSELGLVTPAGKVVWG
Sbjct: 181 AHVTHPELKCTFNLEIIGVKKNPNGQMYTSLGVMTKGTIIEVNVSELGLVTPAGKVVWG 239

[Close]

BLAST of CmoCh07G008530 vs. TAIR10
Match: AT5G06360.1 (AT5G06360.1 Ribosomal protein S8e family protein)

HSP 1 Score: 430.6 bits (1106), Expect = 7.8e-121
Identity = 217/239 (90.79%), Postives = 228/239 (95.40%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQGDYI+LHRKR+GYR DHFERKRKKEAREVHK S MAQK+LGIKGKM AKK YAEKAL
Sbjct: 1   MPQGDYIDLHRKRNGYRLDHFERKRKKEAREVHKHSTMAQKSLGIKGKMIAKKNYAEKAL 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKTL MHEESSSRRK D++VQEGAVPAYLLDRE+T RAKVLSNTIKQKRKEKAGKWEVP
Sbjct: 61  MKKTLKMHEESSSRRKADENVQEGAVPAYLLDREDTTRAKVLSNTIKQKRKEKAGKWEVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVRPVAEDEMF+VIR+GKRKTKQWKRMVTKATFVG +FTRKPPKYERFIRPSGLRFTK
Sbjct: 121 LPKVRPVAEDEMFRVIRSGKRKTKQWKRMVTKATFVGPAFTRKPPKYERFIRPSGLRFTK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELKCTF LEIIG+KKNPNGPMYTSLGVMT+G IIEVNVSELGLVTPAGKVVWG
Sbjct: 181 AHVTHPELKCTFCLEIIGIKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWG 239

[Close]

BLAST of CmoCh07G008530 vs. NCBI nr
Match: gi|449451181|ref|XP_004143340.1| (PREDICTED: ribosome biogenesis protein NSA2 homolog [Cucumis sativus])

HSP 1 Score: 463.0 bits (1190), Expect = 4.0e-127
Identity = 233/239 (97.49%), Postives = 237/239 (99.16%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSA AQKALGIKGKMFAKKRYAEKAL
Sbjct: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSATAQKALGIKGKMFAKKRYAEKAL 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKTLAMHEESSSRRKVDDDVQEGA+PAYLLDRENTARAK+LSNT+KQKRKEKAGKWEVP
Sbjct: 61  MKKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKILSNTVKQKRKEKAGKWEVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGA FTRKPPKYERFIRPSGLRFTK
Sbjct: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGAGFTRKPPKYERFIRPSGLRFTK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+TKGAIIEVNVSELGLVTPAGKVVWG
Sbjct: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGAIIEVNVSELGLVTPAGKVVWG 239

[Close]

BLAST of CmoCh07G008530 vs. NCBI nr
Match: gi|659125313|ref|XP_008462621.1| (PREDICTED: ribosome biogenesis protein NSA2 homolog [Cucumis melo])

HSP 1 Score: 461.1 bits (1185), Expect = 1.5e-126
Identity = 232/239 (97.07%), Postives = 236/239 (98.74%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSA AQKALGIKGKMFAKKRYAEKAL
Sbjct: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSATAQKALGIKGKMFAKKRYAEKAL 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKTLAMHEESSSRRKVDDDV EGAVPAYLLDRENTARAK+LSNT+KQKRKEKAGKWEVP
Sbjct: 61  MKKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRENTARAKILSNTVKQKRKEKAGKWEVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGA FTRKPPKYERFIRPSGLRFTK
Sbjct: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGAGFTRKPPKYERFIRPSGLRFTK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+TKG+IIEVNVSELGLVTPAGKVVWG
Sbjct: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGSIIEVNVSELGLVTPAGKVVWG 239

[Close]

BLAST of CmoCh07G008530 vs. NCBI nr
Match: gi|747053161|ref|XP_011072731.1| (PREDICTED: ribosome biogenesis protein NSA2 homolog [Sesamum indicum])

HSP 1 Score: 452.2 bits (1162), Expect = 7.1e-124
Identity = 227/239 (94.98%), Postives = 233/239 (97.49%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRS +AQKALGIKGKMFAKKRYAEKAL
Sbjct: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSQIAQKALGIKGKMFAKKRYAEKAL 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKTLAMHEESSSRRKVDDDV EGA+PAYLLDR+ T RAKVLSNTIKQKRKEKAGKWEVP
Sbjct: 61  MKKTLAMHEESSSRRKVDDDVHEGALPAYLLDRDETTRAKVLSNTIKQKRKEKAGKWEVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVRPVAEDEMF+VIR+GKRKTKQWKRM+TKATFVG SFTRKPPKYERFIRPSGLRFTK
Sbjct: 121 LPKVRPVAEDEMFRVIRSGKRKTKQWKRMITKATFVGPSFTRKPPKYERFIRPSGLRFTK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKG IIEVNVSELGLVTPAGKVVWG
Sbjct: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNVSELGLVTPAGKVVWG 239

[Close]

BLAST of CmoCh07G008530 vs. NCBI nr
Match: gi|720022320|ref|XP_010263002.1| (PREDICTED: ribosome biogenesis protein NSA2 homolog [Nelumbo nucifera])

HSP 1 Score: 448.0 bits (1151), Expect = 1.3e-122
Identity = 226/239 (94.56%), Postives = 231/239 (96.65%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSA AQKALGIKGKMFAKKRYAEKAL
Sbjct: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAFAQKALGIKGKMFAKKRYAEKAL 60

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKTLAMHEESS+RRKVDD+V EGAVPAYLLDRE T RAKVLSNTIKQKRKEKAGKWEVP
Sbjct: 61  MKKTLAMHEESSTRRKVDDEVHEGAVPAYLLDRETTTRAKVLSNTIKQKRKEKAGKWEVP 120

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVRPVAEDEMF+VIR+GKRKTKQWKRMVTKATFVG  FTRKPPKYERFIRP+GLRFTK
Sbjct: 121 LPKVRPVAEDEMFRVIRSGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTK 180

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELKCTFNLEIIGVKKNPNG MYTSLGVMTKG IIEVNVSELGLVTPAGKVVWG
Sbjct: 181 AHVTHPELKCTFNLEIIGVKKNPNGQMYTSLGVMTKGTIIEVNVSELGLVTPAGKVVWG 239

[Close]

BLAST of CmoCh07G008530 vs. NCBI nr
Match: gi|629082564|gb|KCW49009.1| (hypothetical protein EUGRSUZ_K02620 [Eucalyptus grandis])

HSP 1 Score: 447.6 bits (1150), Expect = 1.8e-122
Identity = 227/239 (94.98%), Postives = 230/239 (96.23%), Query Frame = 1


Query: 1   MPQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKAL 60
           MPQGDYIE HRK HGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGK+FAKKRYAEKAL
Sbjct: 53  MPQGDYIERHRKLHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKLFAKKRYAEKAL 112

Query: 61  MKKTLAMHEESSSRRKVDDDVQEGAVPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVP 120
           MKKTLAMHEESSSRRKVDDDV EGAVPAYLLDR+ T RAKVLSNTIKQKRKEKAGKWEVP
Sbjct: 113 MKKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRDTTTRAKVLSNTIKQKRKEKAGKWEVP 172

Query: 121 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPPKYERFIRPSGLRFTK 180
           LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVG SFTRKPPKYERFIRPSGLRF K
Sbjct: 173 LPKVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGPSFTRKPPKYERFIRPSGLRFNK 232

Query: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVSELGLVTPAGKVVWG 240
           AHVTHPELKCTFNLEIIGVKKNPNG MYTSLGV+TKG IIEVNVSELGLVTPAGKVVWG
Sbjct: 233 AHVTHPELKCTFNLEIIGVKKNPNGSMYTSLGVLTKGTIIEVNVSELGLVTPAGKVVWG 291

The following BLAST results are available for this feature:

BLAST of CmoCh07G008530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NSA2_DICDI	1.2e-94	71.55	Ribosome biogenesis protein NSA2 homolog OS=Dictyostelium discoideum GN=nsa2 PE=...	[more]
NSA2_HUMAN	4.2e-92	70.71	Ribosome biogenesis protein NSA2 homolog OS=Homo sapiens GN=NSA2 PE=1 SV=1	[more]
NSA2_MOUSE	5.5e-92	70.71	Ribosome biogenesis protein NSA2 homolog OS=Mus musculus GN=Nsa2 PE=2 SV=1	[more]
NSA2_BOVIN	5.5e-92	70.71	Ribosome biogenesis protein NSA2 homolog OS=Bos taurus GN=NSA2 PE=2 SV=1	[more]
NSA2_RAT	1.0e-90	69.46	Ribosome biogenesis protein NSA2 homolog OS=Rattus norvegicus GN=Nsa2 PE=2 SV=2	[more]

BLAST of CmoCh07G008530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFK2_CUCSA	2.8e-127	97.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476730 PE=4 SV=1	[more]
A0A067FTA6_CITSI	1.2e-122	94.98	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024952mg PE=4 SV=1	[more]
A0A059A5K8_EUCGR	1.2e-122	94.98	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02620 PE=4 SV=1	[more]
V4T1D5_9ROSI	2.7e-122	94.56	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012509mg PE=4 SV=1	[more]
F6H6T1_VITVI	6.1e-122	94.56	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0105g00280 PE=4 SV=...	[more]

BLAST of CmoCh07G008530 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06360.1	7.8e-121	90.79	Ribosomal protein S8e family protein	[more]

BLAST of CmoCh07G008530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451181\|ref\|XP_004143340.1\|	4.0e-127	97.49	PREDICTED: ribosome biogenesis protein NSA2 homolog [Cucumis sativus]	[more]
gi\|659125313\|ref\|XP_008462621.1\|	1.5e-126	97.07	PREDICTED: ribosome biogenesis protein NSA2 homolog [Cucumis melo]	[more]
gi\|747053161\|ref\|XP_011072731.1\|	7.1e-124	94.98	PREDICTED: ribosome biogenesis protein NSA2 homolog [Sesamum indicum]	[more]
gi\|720022320\|ref\|XP_010263002.1\|	1.3e-122	94.56	PREDICTED: ribosome biogenesis protein NSA2 homolog [Nelumbo nucifera]	[more]
gi\|629082564\|gb\|KCW49009.1\|	1.8e-122	94.98	hypothetical protein EUGRSUZ_K02620 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR022309	Ribosomal_S8e/biogenesis_NSA2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0051604	protein maturation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G008530.1	CmoCh07G008530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 32..303 score: 3.6
None	No IPR available	PANTHER	PTHR12642	FAMILY NOT NAMED	coord: 284..304 score: 1.0E-214coord: 2..239 score: 1.0E
None	No IPR available	PANTHER	PTHR12642:SF0	RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG	coord: 284..304 score: 1.0E-214coord: 2..239 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G008530	Cucsa.083800	Cucumber (Gy14) v1	cgycmoB0150
CmoCh07G008530	CmaCh03G011190	Cucurbita maxima (Rimu)	cmacmoB667
CmoCh07G008530	CmaCh07G008250	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G008530	Cla008400	Watermelon (97103) v1	cmowmB814
CmoCh07G008530	Csa6G476730	Cucumber (Chinese Long) v2	cmocuB863
CmoCh07G008530	MELO3C024586	Melon (DHL92) v3.5.1	cmomeB783
CmoCh07G008530	ClCG01G015010	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G008530	CSPI06G26170	Wild cucumber (PI 183967)	cmocpiB871
CmoCh07G008530	Lsi01G011840	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G008530	Cp4.1LG10g03800	Cucurbita pepo (Zucchini)	cmocpeB806
CmoCh07G008530	MELO3C024586.2	Melon (DHL92) v3.6.1	cmomedB889
CmoCh07G008530	CsaV3_6G041100	Cucumber (Chinese Long) v3	cmocucB1020
CmoCh07G008530	Cla97C01G014010	Watermelon (97103) v2	cmowmbB849
CmoCh07G008530	Bhi03G001377	Wax gourd	cmowgoB1055
CmoCh07G008530	Carg05336	Silver-seed gourd	carcmoB1100

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G008530	CmoCh03G011090	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G008530	Cucumber (Chinese Long) v3	cmocucB0997
CmoCh07G008530	Watermelon (97103) v2	cmowmbB851
CmoCh07G008530	Wax gourd	cmowgoB1041
CmoCh07G008530	Cucurbita moschata (Rifu)	cmocmoB228
CmoCh07G008530	Cucurbita moschata (Rifu)	cmocmoB483
CmoCh07G008530	Cucumber (Gy14) v1	cgycmoB0683
CmoCh07G008530	Cucurbita maxima (Rimu)	cmacmoB275
CmoCh07G008530	Cucurbita maxima (Rimu)	cmacmoB836
CmoCh07G008530	Wild cucumber (PI 183967)	cmocpiB854
CmoCh07G008530	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G008530	Wild cucumber (PI 183967)	cmocpiB874
CmoCh07G008530	Cucumber (Chinese Long) v2	cmocuB844
CmoCh07G008530	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G008530	Melon (DHL92) v3.5.1	cmomeB777
CmoCh07G008530	Watermelon (Charleston Gray)	cmowcgB753
CmoCh07G008530	Watermelon (97103) v1	cmowmB804
CmoCh07G008530	Cucurbita pepo (Zucchini)	cmocpeB821
CmoCh07G008530	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G008530	Cucurbita pepo (Zucchini)	cmocpeB831
CmoCh07G008530	Bottle gourd (USVL1VR-Ls)	cmolsiB787
CmoCh07G008530	Cucumber (Gy14) v2	cgybcmoB419
CmoCh07G008530	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G008530	Melon (DHL92) v3.6.1	cmomedB881
CmoCh07G008530	Silver-seed gourd	carcmoB0338
CmoCh07G008530	Silver-seed gourd	carcmoB0352