CmoCh03G011090 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G011090
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ribosome biogenesis NSA2
Location	Cmo_Chr03 : 8941553 .. 8944288 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTGCTTCTCGACTCGTAAACTTAAAACTTTATATGTTTCCAGTTATTTGCATTTGAAATATTGTTTCTGTATCTTTTGTTGCTTAACAGCCGCAGGGAGATTACATTGAGCTTCACAGGAAGCGACATGGCTACCGCCATGATCACTTTGAGCGTAAACGCAAGAAGGAGGCTCGTGAAGTGCACAAACGATCTGCTATGGCTCAGAAGGTTGGTTTCAGTTCCTTATTTCAATTTCCGCTTATTTGTAATTTTCAATTTGGTTATGATATTGACGTTCTCTTTCTGATTGAACTCGAATGTTGCAGGCTTTGGGTATCAAGGGCAAGATGTTCGCGAAGAAACGTTATGCGGAGAAGGCTCTGATGAAAAAAACGTGAGTATCTTTTGTGGATTTCTTCTCCGGTTGTTAATATCTTTGATTTTGTATTTCAACAGTCCTTTAGGGGTTTAATTCTATCATTTTTCCAATTCTTTACTGTGCATCTCGTATTTTCTATAGTAGACTGGAGTTGTAATAGTTTGATAAGCGTTCATTATTTTATTGTGCATTTGGTATTTTCTATAATTGATTAGAGTAGTAGTAGTTTCGATAAAGTGGCACTCTCTTGATTAGGGCGTTTGACAAATTTCATTTCATTAATGCATTTTGAATGAAATAAATAGTGTTAGATTGGTAATTACTGTATGCTTGTTTCAACAGATTGGCTATGCATGAGGAGTCTTCAAGTAGACGCAAGGTTGATGACGATGTTCAAGAAGGTGCTCTTCCTGCCTATCTATTGGATCGTGAAAATACAGCTCGGGCAAAAGTATGCAATATTGGAACTTTCTTTTAACTTAGTCATGTAGTTTTTCTAAATAAATCTGGGAATCTGACTGTGTACTTTAAAATAGGTTCTCAGCAACACCATTAAGCAAAAGAGGAAAGAAAAAGCTGGAAAGTGGGAAGTTCCCCTGCCCAAGGTAAGGGCTGTTTGTGGTTGCCTTAATGATCGCTTGTTTAAGAGTAACGTTTTTATCGTGGTTTACACTCTTTAGGTCAGGCCTGTTGCGGAGGATGAAATGTTTAAAGTGATAAGAACTGGTAAAAGGAAAAGTAAGTATCAATGTCTGATTTATTCGTTTATTTGCAAATGTTTGTCTTGAATTGTAGTTTTTTTTGCAATACAATCTGTGTAGCTATTGTTGAGAATCTTCAGTTATTGTCTATAAACTATGAAAGTGCAATCATTAATCCATGCATTCTTACAGCAAAACAATGGAAGAGGATGGTCACAAAAGCTACATTTGTCGGGGCTAGTTTTACAAGAAAACCTCCCAAGTACGAGCGGTTTATCCGCCCATCTGGGCTTCGATTTACAAAAGCACATGTAACACATCCCGAACTTAAATGCACTTTCAATCTCGAGATCATCGGAGTGAAGAAAAATCCAAATGGTCCTATGTATACTTCTCTTGGTGTCATGACCAAGGGAGCTATTATTGAGGTACATTGCTCATACGCTCAACCTCTTCACTGTGCGTGAAGTCTTCAATCAATTCTGTTTCTTATTAGTCACATATTCCCTTCTTTTCCGTTCCATTAGGTGAATGTCAGTGAACTTGGATTGGTCACACCAGCTGGGAAAGTAGTATGGGGTAAAGATTTTCGTTCCTTTCTTTTGGACGTTTCTTCATTTGGGATGAAAGTTAATTGACATTATATTTTGTTTGTGTGGTCTCTTCAGGGAAGTATGCTCAGGTGACCAATAATCCGGAGAATGATGGCTGCATAAATGCTGTTCTGCTTGTCTGAAGAAACTTAATTAGACTTGGGGGAGGAGCACAGGTAGGCATTATTTTTGAAGTGGTAGCAAGAATCTTCCTTTTTTTCTTGTCAATTTTTTTGTGGCCATTAGCTCTCTTCCTTGACATGTAACCACAAATGTATTCTTATTTAAATATATATACTTTTCATGCAGATTTTTTCTCCACACGCTAATATTCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCCCCCCCCCCCCCCGTATCATTTAATTGCATGTGTTTTCAGGAACAGTGA

mRNA sequence

ATGGTTTGCTTCTCGACTCGTAAACTTAAAACTTTATATCCGCAGGGAGATTACATTGAGCTTCACAGGAAGCGACATGGCTACCGCCATGATCACTTTGAGCGTAAACGCAAGAAGGAGGCTCGTGAAGTGCACAAACGATCTGCTATGGCTCAGAAGGCTTTGGGTATCAAGGGCAAGATGTTCGCGAAGAAACGTTATGCGGAGAAGGCTCTGATGAAAAAAACATTGGCTATGCATGAGGAGTCTTCAAGTAGACGCAAGGTTGATGACGATGTTCAAGAAGGTGCTCTTCCTGCCTATCTATTGGATCGTGAAAATACAGCTCGGGCAAAAGTTCTCAGCAACACCATTAAGCAAAAGAGGAAAGAAAAAGCTGGAAAGTGGGAAGTTCCCCTGCCCAAGGTAAGGGCTGTTTGTGGTTGCCTTAATGATCGCTTGTTTAAGAGTAACGTCAGGCCTGTTGCGGAGGATGAAATGTTTAAAGTGATAAGAACTGGTAAAAGGAAAACAAAACAATGGAAGAGGATGGTCACAAAAGCTACATTTGTCGGGGCTAGTTTTACAAGAAAACCTCCCAAGTACGAGCGGTTTATCCGCCCATCTGGGCTTCGATTTACAAAAGCACATGTAACACATCCCGAACTTAAATGCACTTTCAATCTCGAGATCATCGGAGTGAAGAAAAATCCAAATGGTCCTATGTATACTTCTCTTGGTGTCATGACCAAGGGAGCTATTATTGAGGTGAATGTCAGTGAACTTGGATTGGTCACACCAGCTGGGAAAGTAGTATGGGGGAAGTATGCTCAGGTGACCAATAATCCGGAGAATGATGGCTGCATAAATGCTGTTCTGCTTGAACAGTGA

Coding sequence (CDS)

ATGGTTTGCTTCTCGACTCGTAAACTTAAAACTTTATATCCGCAGGGAGATTACATTGAGCTTCACAGGAAGCGACATGGCTACCGCCATGATCACTTTGAGCGTAAACGCAAGAAGGAGGCTCGTGAAGTGCACAAACGATCTGCTATGGCTCAGAAGGCTTTGGGTATCAAGGGCAAGATGTTCGCGAAGAAACGTTATGCGGAGAAGGCTCTGATGAAAAAAACATTGGCTATGCATGAGGAGTCTTCAAGTAGACGCAAGGTTGATGACGATGTTCAAGAAGGTGCTCTTCCTGCCTATCTATTGGATCGTGAAAATACAGCTCGGGCAAAAGTTCTCAGCAACACCATTAAGCAAAAGAGGAAAGAAAAAGCTGGAAAGTGGGAAGTTCCCCTGCCCAAGGTAAGGGCTGTTTGTGGTTGCCTTAATGATCGCTTGTTTAAGAGTAACGTCAGGCCTGTTGCGGAGGATGAAATGTTTAAAGTGATAAGAACTGGTAAAAGGAAAACAAAACAATGGAAGAGGATGGTCACAAAAGCTACATTTGTCGGGGCTAGTTTTACAAGAAAACCTCCCAAGTACGAGCGGTTTATCCGCCCATCTGGGCTTCGATTTACAAAAGCACATGTAACACATCCCGAACTTAAATGCACTTTCAATCTCGAGATCATCGGAGTGAAGAAAAATCCAAATGGTCCTATGTATACTTCTCTTGGTGTCATGACCAAGGGAGCTATTATTGAGGTGAATGTCAGTGAACTTGGATTGGTCACACCAGCTGGGAAAGTAGTATGGGGGAAGTATGCTCAGGTGACCAATAATCCGGAGAATGATGGCTGCATAAATGCTGTTCTGCTTGAACAGTGA

Homology

[Close]

BLAST of CmoCh03G011090 vs. Swiss-Prot
Match: NSA2_DICDI (Ribosome biogenesis protein NSA2 homolog OS=Dictyostelium discoideum GN=nsa2 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.3e-103
Identity = 189/274 (68.98%), Postives = 221/274 (80.66%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQGD+IELH+KR G R DH+E+ RKK AR  HKRSA+AQK  G+K K++ KKRY+EKA M
Sbjct: 2   PQGDHIELHQKRFGRRLDHYEKVRKKTARAAHKRSAIAQKVTGLKAKLYNKKRYSEKAEM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKT+AMH+E ++++  DD V+EGA+PAYLLDRE  +RAKVLSN +KQKRKEKAGKW+VPL
Sbjct: 62  KKTIAMHQERTNKKASDDKVKEGAVPAYLLDREGVSRAKVLSNMVKQKRKEKAGKWDVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVRA                ++EDEMFKV+++GKR+ K WKR VTK TFVG  FTRKPP
Sbjct: 122 PKVRA----------------ISEDEMFKVVKSGKRQKKAWKRFVTKVTFVGEGFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRP+GLRF KAHVTHPELK TF L+I+ VKKNP  P YT LGV+TKG I+EVNVS
Sbjct: 182 KYERFIRPTGLRFKKAHVTHPELKSTFYLDILSVKKNPQSPTYTQLGVITKGTILEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           +LGLVT  GKVVWGK AQVTNNPENDGCINAVLL
Sbjct: 242 DLGLVTQTGKVVWGKMAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. Swiss-Prot
Match: NSA2_HUMAN (Ribosome biogenesis protein NSA2 homolog OS=Homo sapiens GN=NSA2 PE=1 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 5.6e-102
Identity = 188/274 (68.61%), Postives = 219/274 (79.93%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQ +YIELHRKR+GYR D+ E+KRKKE+RE H+RS  A+K +G+K K++ K+R+AEK  M
Sbjct: 2   PQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKT+ MHE+ ++++K D+   +GA+PAYLLDRE  +RAKVLSN IKQKRKEKAGKWEVPL
Sbjct: 62  KKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVRA                  E E+ KVIRTGKRK K WKRMVTK  FVG  FTRKPP
Sbjct: 122 PKVRAQ----------------GETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRP GLRF KAHVTHPELK TF L I+GVKKNP+ P+YT+LGV+TKG +IEVNVS
Sbjct: 182 KYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVT  GKV+WGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. Swiss-Prot
Match: NSA2_BOVIN (Ribosome biogenesis protein NSA2 homolog OS=Bos taurus GN=NSA2 PE=2 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 7.3e-102
Identity = 188/274 (68.61%), Postives = 218/274 (79.56%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQ +YIELHRKR+GYR D+ E+KRKKE RE H+RS  A+K +G+K K++ K+R+AEK  M
Sbjct: 2   PQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKT+ MHE+ ++++K D+   +GA+PAYLLDRE  +RAKVLSN IKQKRKEKAGKWEVPL
Sbjct: 62  KKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVRA                  E E+ KVIRTGKRK K WKRMVTK  FVG  FTRKPP
Sbjct: 122 PKVRAQ----------------GETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRP GLRF KAHVTHPELK TF L I+GVKKNP+ P+YT+LGV+TKG +IEVNVS
Sbjct: 182 KYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVT  GKV+WGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. Swiss-Prot
Match: NSA2_MOUSE (Ribosome biogenesis protein NSA2 homolog OS=Mus musculus GN=Nsa2 PE=2 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 7.3e-102
Identity = 188/274 (68.61%), Postives = 218/274 (79.56%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQ +YIELHRKR+GYR D+ E+KRKKE RE H+RS  A+K +G+K K++ K+R+AEK  M
Sbjct: 2   PQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKT+ MHE+ ++++K D+   +GA+PAYLLDRE  +RAKVLSN IKQKRKEKAGKWEVPL
Sbjct: 62  KKTIKMHEKRNTKQKDDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVRA                  E E+ KVIRTGKRK K WKRMVTK  FVG  FTRKPP
Sbjct: 122 PKVRAQ----------------GETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRP GLRF KAHVTHPELK TF L I+GVKKNP+ P+YT+LGV+TKG +IEVNVS
Sbjct: 182 KYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVT  GKV+WGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. Swiss-Prot
Match: NSA2_RAT (Ribosome biogenesis protein NSA2 homolog OS=Rattus norvegicus GN=Nsa2 PE=2 SV=2)

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-100
Identity = 185/274 (67.52%), Postives = 217/274 (79.20%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQ +YIELHRKR+GYR D+ E+KRKKE RE H+RS  A+K +G+K K++ K+R+AEK  M
Sbjct: 2   PQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKT+ MHE+ ++++K D+   +GA+PAYLLDRE  +RAKVLSN IKQKRKEKAGKWE PL
Sbjct: 62  KKTIKMHEKRNTKQKDDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWESPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVRA                  E E+ KVIRTGKRK K W+RMVTK  FVG  FTRKPP
Sbjct: 122 PKVRAQ----------------GETELLKVIRTGKRKKKAWRRMVTKVCFVGDGFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYE+FIRP GLRF KAHVTHPELK TF L I+GVKKNP+ P+YT+LGV+TKG +IEVNVS
Sbjct: 182 KYEKFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVT  GKV+WGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. TrEMBL
Match: A0A0A0KFK2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476730 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 2.8e-137
Identity = 253/274 (92.34%), Postives = 256/274 (93.43%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSA AQKALGIKGKMFAKKRYAEKALM
Sbjct: 2   PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSATAQKALGIKGKMFAKKRYAEKALM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAK+LSNT+KQKRKEKAGKWEVPL
Sbjct: 62  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKILSNTVKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVR                PVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGA FTRKPP
Sbjct: 122 PKVR----------------PVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGAGFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+TKGAIIEVNVS
Sbjct: 182 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGAIIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. TrEMBL
Match: A0A067FTA6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024952mg PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 6.1e-132
Identity = 245/274 (89.42%), Postives = 252/274 (91.97%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQGDYIELHRKR+GYR DHFERKRKKEAREVHKRS +AQKALGIKGKMFAKKRYAEKALM
Sbjct: 2   PQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKTLAMHEESSSRRKVDD+VQEGA+PAYLLDRENT RAKVLSNTIKQKRKEKAGKWEVPL
Sbjct: 62  KKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVR                PVAEDEMFKVIR+GKR+TKQWKRMVTKATFVG  FTRKPP
Sbjct: 122 PKVR----------------PVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+TKG IIEVNVS
Sbjct: 182 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. TrEMBL
Match: V4T1D5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012509mg PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 1.4e-131
Identity = 244/274 (89.05%), Postives = 252/274 (91.97%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQGDYIELHRKR+GYR DHFERKRKKEAREVHKRS +AQKALGIKGKMFAKKRYAEKALM
Sbjct: 2   PQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKTLAMHEESSSRRKVDD+VQEGA+PAYLLDRENT RAKVLSNTIKQKRKEKAGKWEVPL
Sbjct: 62  KKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVR                PVAEDEMFKVIR+GKR+TKQWKRMVTKATFVG  FTRKPP
Sbjct: 122 PKVR----------------PVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+TKG IIEVNVS
Sbjct: 182 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELG+VTPAGKVVWGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGVVTPAGKVVWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. TrEMBL
Match: A0A059A5K8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02620 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 2.3e-131
Identity = 243/274 (88.69%), Postives = 248/274 (90.51%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQGDYIE HRK HGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGK+FAKKRYAEKALM
Sbjct: 54  PQGDYIERHRKLHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKLFAKKRYAEKALM 113

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKTLAMHEESSSRRKVDDDV EGA+PAYLLDR+ T RAKVLSNTIKQKRKEKAGKWEVPL
Sbjct: 114 KKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRDTTTRAKVLSNTIKQKRKEKAGKWEVPL 173

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVR                PVAEDEMFKVIRTGKRKTKQWKRMVTKATFVG SFTRKPP
Sbjct: 174 PKVR----------------PVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGPSFTRKPP 233

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRPSGLRF KAHVTHPELKCTFNLEIIGVKKNPNG MYTSLGV+TKG IIEVNVS
Sbjct: 234 KYERFIRPSGLRFNKAHVTHPELKCTFNLEIIGVKKNPNGSMYTSLGVLTKGTIIEVNVS 293

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVTPAGKVVWGKYAQVTNNPENDGC+N VLL
Sbjct: 294 ELGLVTPAGKVVWGKYAQVTNNPENDGCVNGVLL 311

[Close]

BLAST of CmoCh03G011090 vs. TrEMBL
Match: F6H6T1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0105g00280 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 3.0e-131
Identity = 244/274 (89.05%), Postives = 249/274 (90.88%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQGDYI+LHRKRHGYR DHFERKRKKEAREVHKRS +AQKALGIKGKMFAKKRYAEKA M
Sbjct: 2   PQGDYIDLHRKRHGYRPDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKAQM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKTLAMHEESSSRRKVDDDV EGA+PAYLLDRE T RAKVLSNTIKQKRKEKAGKWEVPL
Sbjct: 62  KKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRETTTRAKVLSNTIKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVR                PVAEDEMFKV+RTGKRKTKQWKRMVTKATFVG +FTRKPP
Sbjct: 122 PKVR----------------PVAEDEMFKVLRTGKRKTKQWKRMVTKATFVGPAFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNG MYTSLGVMTKG IIEVNVS
Sbjct: 182 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGQMYTSLGVMTKGTIIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. TAIR10
Match: AT5G06360.1 (AT5G06360.1 Ribosomal protein S8e family protein)

HSP 1 Score: 461.5 bits (1186), Expect = 3.9e-130
Identity = 235/274 (85.77%), Postives = 247/274 (90.15%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQGDYI+LHRKR+GYR DHFERKRKKEAREVHK S MAQK+LGIKGKM AKK YAEKALM
Sbjct: 2   PQGDYIDLHRKRNGYRLDHFERKRKKEAREVHKHSTMAQKSLGIKGKMIAKKNYAEKALM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKTL MHEESSSRRK D++VQEGA+PAYLLDRE+T RAKVLSNTIKQKRKEKAGKWEVPL
Sbjct: 62  KKTLKMHEESSSRRKADENVQEGAVPAYLLDREDTTRAKVLSNTIKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVR                PVAEDEMF+VIR+GKRKTKQWKRMVTKATFVG +FTRKPP
Sbjct: 122 PKVR----------------PVAEDEMFRVIRSGKRKTKQWKRMVTKATFVGPAFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRPSGLRFTKAHVTHPELKCTF LEIIG+KKNPNGPMYTSLGVMT+G IIEVNVS
Sbjct: 182 KYERFIRPSGLRFTKAHVTHPELKCTFCLEIIGIKKNPNGPMYTSLGVMTRGTIIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. NCBI nr
Match: gi|449451181|ref|XP_004143340.1| (PREDICTED: ribosome biogenesis protein NSA2 homolog [Cucumis sativus])

HSP 1 Score: 496.1 bits (1276), Expect = 4.1e-137
Identity = 253/274 (92.34%), Postives = 256/274 (93.43%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSA AQKALGIKGKMFAKKRYAEKALM
Sbjct: 2   PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSATAQKALGIKGKMFAKKRYAEKALM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAK+LSNT+KQKRKEKAGKWEVPL
Sbjct: 62  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKILSNTVKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVR                PVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGA FTRKPP
Sbjct: 122 PKVR----------------PVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGAGFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+TKGAIIEVNVS
Sbjct: 182 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGAIIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. NCBI nr
Match: gi|659125313|ref|XP_008462621.1| (PREDICTED: ribosome biogenesis protein NSA2 homolog [Cucumis melo])

HSP 1 Score: 491.9 bits (1265), Expect = 7.7e-136
Identity = 250/274 (91.24%), Postives = 255/274 (93.07%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSA AQKALGIKGKMFAKKRYAEKALM
Sbjct: 2   PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSATAQKALGIKGKMFAKKRYAEKALM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKTLAMHEESSSRRKVDDDV EGA+PAYLLDRENTARAK+LSNT+KQKRKEKAGKWEVPL
Sbjct: 62  KKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRENTARAKILSNTVKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVR                PVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGA FTRKPP
Sbjct: 122 PKVR----------------PVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGAGFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+TKG+IIEVNVS
Sbjct: 182 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGSIIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. NCBI nr
Match: gi|747053161|ref|XP_011072731.1| (PREDICTED: ribosome biogenesis protein NSA2 homolog [Sesamum indicum])

HSP 1 Score: 485.3 bits (1248), Expect = 7.2e-134
Identity = 247/274 (90.15%), Postives = 252/274 (91.97%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRS +AQKALGIKGKMFAKKRYAEKALM
Sbjct: 2   PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSQIAQKALGIKGKMFAKKRYAEKALM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKTLAMHEESSSRRKVDDDV EGALPAYLLDR+ T RAKVLSNTIKQKRKEKAGKWEVPL
Sbjct: 62  KKTLAMHEESSSRRKVDDDVHEGALPAYLLDRDETTRAKVLSNTIKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVR                PVAEDEMF+VIR+GKRKTKQWKRM+TKATFVG SFTRKPP
Sbjct: 122 PKVR----------------PVAEDEMFRVIRSGKRKTKQWKRMITKATFVGPSFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKG IIEVNVS
Sbjct: 182 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. NCBI nr
Match: gi|720022320|ref|XP_010263002.1| (PREDICTED: ribosome biogenesis protein NSA2 homolog [Nelumbo nucifera])

HSP 1 Score: 478.8 bits (1231), Expect = 6.7e-132
Identity = 244/274 (89.05%), Postives = 250/274 (91.24%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSA AQKALGIKGKMFAKKRYAEKALM
Sbjct: 2   PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAFAQKALGIKGKMFAKKRYAEKALM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKTLAMHEESS+RRKVDD+V EGA+PAYLLDRE T RAKVLSNTIKQKRKEKAGKWEVPL
Sbjct: 62  KKTLAMHEESSTRRKVDDEVHEGAVPAYLLDRETTTRAKVLSNTIKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVR                PVAEDEMF+VIR+GKRKTKQWKRMVTKATFVG  FTRKPP
Sbjct: 122 PKVR----------------PVAEDEMFRVIRSGKRKTKQWKRMVTKATFVGPGFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRP+GLRFTKAHVTHPELKCTFNLEIIGVKKNPNG MYTSLGVMTKG IIEVNVS
Sbjct: 182 KYERFIRPTGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGQMYTSLGVMTKGTIIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 259

[Close]

BLAST of CmoCh03G011090 vs. NCBI nr
Match: gi|568856036|ref|XP_006481596.1| (PREDICTED: ribosome biogenesis protein NSA2 homolog [Citrus sinensis])

HSP 1 Score: 478.4 bits (1230), Expect = 8.8e-132
Identity = 245/274 (89.42%), Postives = 252/274 (91.97%), Query Frame = 1


Query: 14  PQGDYIELHRKRHGYRHDHFERKRKKEAREVHKRSAMAQKALGIKGKMFAKKRYAEKALM 73
           PQGDYIELHRKR+GYR DHFERKRKKEAREVHKRS +AQKALGIKGKMFAKKRYAEKALM
Sbjct: 2   PQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALM 61

Query: 74  KKTLAMHEESSSRRKVDDDVQEGALPAYLLDRENTARAKVLSNTIKQKRKEKAGKWEVPL 133
           KKTLAMHEESSSRRKVDD+VQEGA+PAYLLDRENT RAKVLSNTIKQKRKEKAGKWEVPL
Sbjct: 62  KKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPL 121

Query: 134 PKVRAVCGCLNDRLFKSNVRPVAEDEMFKVIRTGKRKTKQWKRMVTKATFVGASFTRKPP 193
           PKVR                PVAEDEMFKVIR+GKR+TKQWKRMVTKATFVG  FTRKPP
Sbjct: 122 PKVR----------------PVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPP 181

Query: 194 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEVNVS 253
           KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+TKG IIEVNVS
Sbjct: 182 KYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVS 241

Query: 254 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 288
           ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL
Sbjct: 242 ELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 259

The following BLAST results are available for this feature:

BLAST of CmoCh03G011090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NSA2_DICDI	1.3e-103	68.98	Ribosome biogenesis protein NSA2 homolog OS=Dictyostelium discoideum GN=nsa2 PE=...	[more]
NSA2_HUMAN	5.6e-102	68.61	Ribosome biogenesis protein NSA2 homolog OS=Homo sapiens GN=NSA2 PE=1 SV=1	[more]
NSA2_BOVIN	7.3e-102	68.61	Ribosome biogenesis protein NSA2 homolog OS=Bos taurus GN=NSA2 PE=2 SV=1	[more]
NSA2_MOUSE	7.3e-102	68.61	Ribosome biogenesis protein NSA2 homolog OS=Mus musculus GN=Nsa2 PE=2 SV=1	[more]
NSA2_RAT	1.4e-100	67.52	Ribosome biogenesis protein NSA2 homolog OS=Rattus norvegicus GN=Nsa2 PE=2 SV=2	[more]

BLAST of CmoCh03G011090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFK2_CUCSA	2.8e-137	92.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476730 PE=4 SV=1	[more]
A0A067FTA6_CITSI	6.1e-132	89.42	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024952mg PE=4 SV=1	[more]
V4T1D5_9ROSI	1.4e-131	89.05	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012509mg PE=4 SV=1	[more]
A0A059A5K8_EUCGR	2.3e-131	88.69	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02620 PE=4 SV=1	[more]
F6H6T1_VITVI	3.0e-131	89.05	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0105g00280 PE=4 SV=...	[more]

BLAST of CmoCh03G011090 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06360.1	3.9e-130	85.77	Ribosomal protein S8e family protein	[more]

BLAST of CmoCh03G011090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451181\|ref\|XP_004143340.1\|	4.1e-137	92.34	PREDICTED: ribosome biogenesis protein NSA2 homolog [Cucumis sativus]	[more]
gi\|659125313\|ref\|XP_008462621.1\|	7.7e-136	91.24	PREDICTED: ribosome biogenesis protein NSA2 homolog [Cucumis melo]	[more]
gi\|747053161\|ref\|XP_011072731.1\|	7.2e-134	90.15	PREDICTED: ribosome biogenesis protein NSA2 homolog [Sesamum indicum]	[more]
gi\|720022320\|ref\|XP_010263002.1\|	6.7e-132	89.05	PREDICTED: ribosome biogenesis protein NSA2 homolog [Nelumbo nucifera]	[more]
gi\|568856036\|ref\|XP_006481596.1\|	8.8e-132	89.42	PREDICTED: ribosome biogenesis protein NSA2 homolog [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR022309	Ribosomal_S8e/biogenesis_NSA2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0051604	protein maturation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G011090.1	CmoCh03G011090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 44..287 score: 2.3
None	No IPR available	PANTHER	PTHR12642	FAMILY NOT NAMED	coord: 154..288 score: 7.7E-219coord: 14..137 score: 7.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G011090	Cucsa.083800	Cucumber (Gy14) v1	cgycmoB0148
CmoCh03G011090	CmaCh03G011190	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G011090	CmaCh07G008250	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G011090	Cla008400	Watermelon (97103) v1	cmowmB620
CmoCh03G011090	Csa6G476730	Cucumber (Chinese Long) v2	cmocuB668
CmoCh03G011090	MELO3C024586	Melon (DHL92) v3.5.1	cmomeB598
CmoCh03G011090	ClCG01G015010	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G011090	CSPI06G26170	Wild cucumber (PI 183967)	cmocpiB679
CmoCh03G011090	Lsi01G011840	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G011090	Cp4.1LG10g03800	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G011090	MELO3C024586.2	Melon (DHL92) v3.6.1	cmomedB687
CmoCh03G011090	CsaV3_6G041100	Cucumber (Chinese Long) v3	cmocucB0794
CmoCh03G011090	Cla97C01G014010	Watermelon (97103) v2	cmowmbB642
CmoCh03G011090	Bhi03G001377	Wax gourd	cmowgoB0784
CmoCh03G011090	Carg05336	Silver-seed gourd	carcmoB1095

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G011090	CmoCh07G008530	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G011090	Cucumber (Gy14) v2	cgybcmoB384
CmoCh03G011090	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G011090	Melon (DHL92) v3.6.1	cmomedB676
CmoCh03G011090	Silver-seed gourd	carcmoB0336
CmoCh03G011090	Silver-seed gourd	carcmoB0349
CmoCh03G011090	Cucumber (Chinese Long) v3	cmocucB0771
CmoCh03G011090	Watermelon (97103) v2	cmowmbB643
CmoCh03G011090	Cucurbita moschata (Rifu)	cmocmoB217
CmoCh03G011090	Cucumber (Gy14) v1	cgycmoB0680
CmoCh03G011090	Cucurbita maxima (Rimu)	cmacmoB263
CmoCh03G011090	Wild cucumber (PI 183967)	cmocpiB659
CmoCh03G011090	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G011090	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G011090	Melon (DHL92) v3.5.1	cmomeB590
CmoCh03G011090	Watermelon (Charleston Gray)	cmowcgB568
CmoCh03G011090	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G011090	Cucurbita pepo (Zucchini)	cmocpeB635
CmoCh03G011090	Bottle gourd (USVL1VR-Ls)	cmolsiB597