CmoCh07G007830 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G007830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Mitochondrial ATP synthase
Location	Cmo_Chr07 : 3549764 .. 3553520 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAGGTGCACTAGTTTTCGATCATGACCATCCATTTGGAAAATTAATGTACGACAATCCAACGGTGGGGATTCGAAGTAGACCGACTAATGAGGAGCAGGCTCCATCGAACCATTTCTAGCAGAGCTCCCCCTCCGCTTCGCGCAGACTGCCTCCTTCACACCCCTAATATATCCGACTTCCAATCCTCAAACGATTCAACGAAGCATCAGAAGAAGGGCGCAATCCGAGCTACCATCATGGCTTTCTCTTCTCGTCTCTTGTCCAAATCCAAGCAGGTCTGTTCTTTTCCTTCCTGGATCGGCCCCGTTTACCCTACGTTCCGTTCTCCATGATTATTCTTCTTTAAATGAACTTTTAAGGATTGATATGCGTGTGTGGCTTTTGTCTTTTTTTATTGATTTGATTTGATTTTTTTTAATTTTTGTTTACGTTCTTTTGTTTTATATTTGGGAATGGAGCTGATTATTAGCAATACTCGTATGGATCCTGGAAATGGTGTAATGTTTATCAATTTCTCCCTCCCTCTAGTTCAAATTTTCTTTATTGGCTCGCGTAATTTTCTACGTTTTGAAGGTGTAGGATTTTTTAACTGTTTATTTAGGATCTGTGATTTTAGGGTTTCTTTGGATGATGTAAAGTATGCAGGTTGCTGGCCGTATAGTTTGGACATTGTAATTCTGTGCTTGTAGGGCAAATGTTTATTTTTTTAATATTGCGTAGAGGCGTAATGATTATTGAATCAGCTGCTCGACGTGTGTTTTTTGTGCCTCTTTGATGTTACAGGTGCTTGGCGGTCGAAGTATCTTACATCAGGGGTATGCCATTCCTGTTCGTCACTTTGCGGAAGAGGCTCCTCGGCCTGCTCTGAAGGGAGATGGTGAGGCAAAATACGCTCAATTAGTGAGAAATGGGGAGAGAAAGAGAGAGAGAGAGAGCTATGAAGTTTGGTTTATGTCAATCACACAGTTGTAGTTAAATCTTTAAGGAATCATACATAAAAATTACGTGAGAATTGCATTAGATATGTGTATATGAAGACTATAAAGCTACATGAGTGGTGCATTAACTTCTCTATATGAACAACGATCATAATTTTCTGTGATTTCGTAGATAATGTTTTTTTTGAATTTTTTTATGTGGGTGCCAAAGAAACGCTGAAGAACATATTTCTGGAAGTGAAAAAGAAATTTGATACAGCAATTGATGTTTTCCGTAAAGAGAAGATCACTATTGATCCAGAGGATCCTGCTGCTGTAGCTCAATACGCAAAGGTCATGAAACAGGCCAGAGAGAAGTGAGTGTTTTTGAATGATTACTACATTTTATAATTGTGAAATTTGAGTGTTTTTGCTGAAGAACATACTCGTGGGTTGACTCCCTATATCTTTTTCTGTGCAATTAACTGGTGCAGAGGGGTAGCCCGGGTCATTTTATCTTTTTAAGCATATTAATCAAATTCCCCTGCCAATATTAGCTTCTTTTATTGTTTGTTTTTAGTTGATTCTTTTGAGGGTCCTTGTACTCCAGTACACTTTGCTTGGTGAAATTCTGCCTCTGCATTCTGAAACAATTTTGTTGTAGTTGAATTAAAGGAAGCATTTGGAGAGTAATGGTGTGATAATCATGAATATTCAAAGACACGTTTTGGTGATCATATTTTTTCTATGTGCTCAATAAACTGGAAATGGAGTTACATTACTCAAGGGGGGATCACTAATGTCAATTTATGTTCCACTTACATTGTACCTTTTTCTAGGAAAATAGCTACAAAAAATTATACACAGAGTAATCATTTATTTTTGTGTTCCATGCTAGCATTTATGAGCCAGCCTTGTTATCGGCCTTCATGGAAGTTTATTTATTTATTTTTATCACGTGACAATGGAACATGTGTTCGTATCAGTACATGCATAATGGTGAATTTATATTATAAAAATATGTGCATATGAATTCTGTATGAGTTACAATTTTAACCCTCTTTTTTTTCCTCACAGGGCAGATTTATTCTCAGAATCAGAGGTAATCAAAAACACCATTCAGTCACGAACCCAAGGCATCCCCGATGCAAGAACATACTTGCTGACATTGAAGGATATCCGGATTGAGTATGCTCCTCTTTCATGGACTTTGATTTCTTGTCAACACGAGAAATGCACTGTCTAAATTTCTCTCCTTAGCTTGTTTGTTAACAGTTGTGGTGTCATGAATATTTGGGTTTCAAGGCATTGCAAGATGGACAAGACTTGGAGACTGGAAAGAAAGCCTGGAAACCTCCTCACCAAAAGGAGGAAATAAAAAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAGAAGCTCCAAGCCTCCAATACATCTGCATTTATAAAAGCTAACTTTTACTAACACGACTTGCAATTCATCAAGTATTAAGCTAAGTTGGCACAGGGATGGATTGGCTGACATGGTTAATGTTTACTGAATAAACTTGTGTCATCTAACTCGAGCTATATTTTGAGCCTTGAACTAGTTTTTCTTTTCTTTTTTGTTTTTTTTCACTTTGCATGTCAACGTTTTCAGATTTTTTGGCATTTTTTCCTCCATATAGTCCAATCTGAATATTTTTCTCCAAACATTTCCAAATATTTGTTGTAAGGTTCTGGTATGGATTTGGGATAGTATGATACTATATTTTAGAGGTATTTAATGCCCATGCATTCATTTTTATCTTTGAAACTTGTGACGTTGATCTTATGTCTATTGCCAAGTGCAGGACTTTGTTGTTTGTTTCTTGATCATATTCCTTCGCATTTTTCAGGAGAGGTCTTAATGATCAGCTTGGTGCAGAAGCTATGATGTTTGATGCACTGGAAAAGATTGAGAAAGAATTGAAGAAACCTCTCATGAGGAATGACAAAAAAGGAATGTCTCTTCTTATGGCTGAGTTTGACAAAATCAATCAAAAGTACAATTCTAACTTCTTATACTTTTTGTTTATTTTGGCCCCATTCCAAAAGATTGAGTGGTTTATACACACACACACACACACACACACACAAAAGATTGCCATCAAGGACAAAATGTCTTGTCAGAAAATAGAAGCTCTCACGCTCCCCTTTTGGATGAAGGACATGTTCACCATCCTTCTATGTCTGTTTTCGTGGAAGATACACTACAGATGTGAACATTATGGAGAACTATCGTATGATAGACCAGTGAAATAAATACTAATTGATGAACTGAAAAAAAAAACGTAGTAAATACAAAATTTAGTGTAGAATAAGATTCATTTTTATTTTTTCTGCATTGTGTGTCTATTTGGTGGCAGAGCCGGTTGCACCTATTAGTGAAGCTAAGGTACCCAACTATTAGATTTATTTTCTTATTTGACTTGGACTCTAGCTTTTACCAATGTAAATTTCTGAAGGAGCTGGGGATAGTTGCTAGCTATCCTACATACATACAGTTGAACAATCTTTCCATAAGGATAAAAGATATACAGTATTGAAGACTTCATCTCAACATTTTTGGATCAGGATTGGGATACGGAGGGAAGATCTGCCCAAGTACGAAGAGCAGTTGGAACTTAAAATTTCCAAGGCACAATTGGAAGACCTGAAGAAAGATGCTCTTGAGGCAATGGAAACTCAAAAGAAGCGGTATGTAGTTTGTGGTTTGTTATAATTATTATGCTGCAAAATAGTCGATTCTAAGTTGATAGCATGGTTTCCAGCAGACGATTCTGTGCTGCCTTCTTTTTTGTAGTTTGA

mRNA sequence

GTTGAGGTGCACTAGTTTTCGATCATGACCATCCATTTGGAAAATTAATGTACGACAATCCAACGGTGGGGATTCGAAGTAGACCGACTAATGAGGAGCAGGCTCCATCGAACCATTTCTAGCAGAGCTCCCCCTCCGCTTCGCGCAGACTGCCTCCTTCACACCCCTAATATATCCGACTTCCAATCCTCAAACGATTCAACGAAGCATCAGAAGAAGGGCGCAATCCGAGCTACCATCATGGCTTTCTCTTCTCGTCTCTTGTCCAAATCCAAGCAGGTGCTTGGCGGTCGAAGTATCTTACATCAGGGGTATGCCATTCCTGTTCGTCACTTTGCGGAAGAGGCTCCTCGGCCTGCTCTGAAGGGAGATGAAACGCTGAAGAACATATTTCTGGAAGTGAAAAAGAAATTTGATACAGCAATTGATGTTTTCCGTAAAGAGAAGATCACTATTGATCCAGAGGATCCTGCTGCTGTAGCTCAATACGCAAAGGTCATGAAACAGGCCAGAGAGAAGGCAGATTTATTCTCAGAATCAGAGGTAATCAAAAACACCATTCAGTCACGAACCCAAGGCATCCCCGATGCAAGAACATACTTGCTGACATTGAAGGATATCCGGATTGAGAGAGGTCTTAATGATCAGCTTGGTGCAGAAGCTATGATGTTTGATGCACTGGAAAAGATTGAGAAAGAATTGAAGAAACCTCTCATGAGGAATGACAAAAAAGGAATGTCTCTTCTTATGGCTGAGTTTGACAAAATCAATCAAAAGATTGGGATACGGAGGGAAGATCTGCCCAAGTACGAAGAGCAGTTGGAACTTAAAATTTCCAAGGCACAATTGGAAGACCTGAAGAAAGATGCTCTTGAGGCAATGGAAACTCAAAAGAAGCGACGATTCTGTGCTGCCTTCTTTTTTGTAGTTTGA

Coding sequence (CDS)

ATGAGGAGCAGGCTCCATCGAACCATTTCTAGCAGAGCTCCCCCTCCGCTTCGCGCAGACTGCCTCCTTCACACCCCTAATATATCCGACTTCCAATCCTCAAACGATTCAACGAAGCATCAGAAGAAGGGCGCAATCCGAGCTACCATCATGGCTTTCTCTTCTCGTCTCTTGTCCAAATCCAAGCAGGTGCTTGGCGGTCGAAGTATCTTACATCAGGGGTATGCCATTCCTGTTCGTCACTTTGCGGAAGAGGCTCCTCGGCCTGCTCTGAAGGGAGATGAAACGCTGAAGAACATATTTCTGGAAGTGAAAAAGAAATTTGATACAGCAATTGATGTTTTCCGTAAAGAGAAGATCACTATTGATCCAGAGGATCCTGCTGCTGTAGCTCAATACGCAAAGGTCATGAAACAGGCCAGAGAGAAGGCAGATTTATTCTCAGAATCAGAGGTAATCAAAAACACCATTCAGTCACGAACCCAAGGCATCCCCGATGCAAGAACATACTTGCTGACATTGAAGGATATCCGGATTGAGAGAGGTCTTAATGATCAGCTTGGTGCAGAAGCTATGATGTTTGATGCACTGGAAAAGATTGAGAAAGAATTGAAGAAACCTCTCATGAGGAATGACAAAAAAGGAATGTCTCTTCTTATGGCTGAGTTTGACAAAATCAATCAAAAGATTGGGATACGGAGGGAAGATCTGCCCAAGTACGAAGAGCAGTTGGAACTTAAAATTTCCAAGGCACAATTGGAAGACCTGAAGAAAGATGCTCTTGAGGCAATGGAAACTCAAAAGAAGCGACGATTCTGTGCTGCCTTCTTTTTTGTAGTTTGA

Homology

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BLAST of CmoCh07G007830 vs. Swiss-Prot
Match: ATP7_ARATH (Probable ATP synthase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana GN=At2g21870 PE=1 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.2e-78
Identity = 146/220 (66.36%), Postives = 184/220 (83.64%), Query Frame = 1


Query: 51  MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAPRPALKGDETLKNIFLEVKKKFDT 110
           MA++SR LS+SKQ+ GG  IL Q +AIPVR FA+EA RP  KGDE LK +F ++K KF  
Sbjct: 1   MAYASRFLSRSKQLQGGLVILQQQHAIPVRAFAKEAARPTFKGDEMLKGVFFDIKNKFQA 60

Query: 111 AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLFSESEVIKNTIQSRTQGIPDARTY 170
           A+D+ RKEKIT+DPEDPAAV QYA VMK  R+KAD+FSES+ IK+ I + TQ IPDAR Y
Sbjct: 61  AVDILRKEKITLDPEDPAAVKQYANVMKTIRQKADMFSESQRIKHDIDTETQDIPDARAY 120

Query: 171 LLTLKDIRIERGLNDQLGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 230
           LL L++IR  RGL D+LGAEAMMF+ALEK+EK++KKPL+R+DKKGM LL+AEF+K N+K+
Sbjct: 121 LLKLQEIRTRRGLTDELGAEAMMFEALEKVEKDIKKPLLRSDKKGMDLLVAEFEKGNKKL 180

Query: 231 GIRREDLPKYEEQLELKISKAQLEDLKKDALEAMETQKKR 271
           GIR+EDLPKYEE LEL ++KAQL++LK DA+EAME+QKK+
Sbjct: 181 GIRKEDLPKYEENLELSMAKAQLDELKSDAVEAMESQKKK 220

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BLAST of CmoCh07G007830 vs. TrEMBL
Match: A0A0A0KKY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486940 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.8e-96
Identity = 188/220 (85.45%), Postives = 207/220 (94.09%), Query Frame = 1


Query: 51  MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAPRPALKGDETLKNIFLEVKKKFDT 110
           MA SSRLLSKSKQVLG +SILHQG+A PVRHFA+EA  PALKGDE LKNIFLEVKKKF+T
Sbjct: 1   MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAAPPALKGDEMLKNIFLEVKKKFET 60

Query: 111 AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLFSESEVIKNTIQSRTQGIPDARTY 170
           A+ VF+KEKITIDP+DPAAVAQYAKVMK AREKADLFSES+ IK TIQ+RTQ IPDAR+Y
Sbjct: 61  ALAVFKKEKITIDPDDPAAVAQYAKVMKLAREKADLFSESQRIKYTIQTRTQDIPDARSY 120

Query: 171 LLTLKDIRIERGLNDQLGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 230
           LL LK+IRI+RGL+D LGAEAMMFDALEK+EKELKKPL+RNDKKGMS+LMAEFDKINQK+
Sbjct: 121 LLALKEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSVLMAEFDKINQKL 180

Query: 231 GIRREDLPKYEEQLELKISKAQLEDLKKDALEAMETQKKR 271
           GIRREDLPKYEEQLELKISKAQLE++KKDALEAMETQKKR
Sbjct: 181 GIRREDLPKYEEQLELKISKAQLEEMKKDALEAMETQKKR 220

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BLAST of CmoCh07G007830 vs. TrEMBL
Match: A5ATU0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031883 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.6e-92
Identity = 181/221 (81.90%), Postives = 203/221 (91.86%), Query Frame = 1


Query: 51  MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAPRPALKGDETLKNIFLEVKKKFDT 110
           MAFSSRLLSKSKQ+ G + IL Q +A+PVR FA+EA  PALKGDE LKNIFLEVKKKF+T
Sbjct: 1   MAFSSRLLSKSKQLYGSQIILQQQHAVPVRFFAKEAAPPALKGDEMLKNIFLEVKKKFET 60

Query: 111 AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLFSESEVIKNTIQSRTQGIPDARTY 170
           A+ V RKEKITIDPEDPAAV QYAKVMK  REKADLFSES+ I+ TIQ+RTQGIPDARTY
Sbjct: 61  AMGVLRKEKITIDPEDPAAVNQYAKVMKTVREKADLFSESQRIQYTIQTRTQGIPDARTY 120

Query: 171 LLTLKDIRIERGLNDQLGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 230
           LLTLK+IRI+RGL D+LGAEAMM DALEK+EKELKKPLMRNDKKGM+LLMAEFDK+N+K+
Sbjct: 121 LLTLKEIRIKRGLTDELGAEAMMMDALEKVEKELKKPLMRNDKKGMALLMAEFDKVNKKL 180

Query: 231 GIRREDLPKYEEQLELKISKAQLEDLKKDALEAMETQKKRR 272
           G+R+EDLPKYEEQLELKI+KAQLE+LKKDALEAMETQKKRR
Sbjct: 181 GVRKEDLPKYEEQLELKIAKAQLEELKKDALEAMETQKKRR 221

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BLAST of CmoCh07G007830 vs. TrEMBL
Match: D7SW76_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01740 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 6.0e-92
Identity = 180/220 (81.82%), Postives = 202/220 (91.82%), Query Frame = 1


Query: 51  MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAPRPALKGDETLKNIFLEVKKKFDT 110
           MAFSSRLLSKSKQ+ G + IL Q +A+PVR FA+EA  PALKGDE LKNIFLEVKKKF+T
Sbjct: 1   MAFSSRLLSKSKQLYGSQIILQQQHAVPVRFFAKEAAPPALKGDEMLKNIFLEVKKKFET 60

Query: 111 AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLFSESEVIKNTIQSRTQGIPDARTY 170
           A+ V RKEKITIDPEDPAAV QYAKVMK  REKADLFSES+ I+ TIQ+RTQGIPDARTY
Sbjct: 61  AMGVLRKEKITIDPEDPAAVNQYAKVMKTVREKADLFSESQRIQYTIQTRTQGIPDARTY 120

Query: 171 LLTLKDIRIERGLNDQLGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 230
           LLTLK+IRI+RGL D+LGAEAMM DALEK+EKELKKPLMRNDKKGM+LLMAEFDK+N+K+
Sbjct: 121 LLTLKEIRIKRGLTDELGAEAMMMDALEKVEKELKKPLMRNDKKGMALLMAEFDKVNKKL 180

Query: 231 GIRREDLPKYEEQLELKISKAQLEDLKKDALEAMETQKKR 271
           G+R+EDLPKYEEQLELKI+KAQLE+LKKDALEAMETQKKR
Sbjct: 181 GVRKEDLPKYEEQLELKIAKAQLEELKKDALEAMETQKKR 220

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BLAST of CmoCh07G007830 vs. TrEMBL
Match: A0A059B853_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04880 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.0e-87
Identity = 174/220 (79.09%), Postives = 199/220 (90.45%), Query Frame = 1


Query: 51  MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAPRPALKGDETLKNIFLEVKKKFDT 110
           MA +SRL+SKS+Q+ G ++IL + +A+PVR FA+EA   ALKGDE LKNIFLEVKKKF+T
Sbjct: 1   MALASRLVSKSRQLCGTQTILLREHAVPVRFFAKEAAPAALKGDEMLKNIFLEVKKKFET 60

Query: 111 AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLFSESEVIKNTIQSRTQGIPDARTY 170
           AI V RKEKITI PEDPAAVAQYAKVMK  REKADLFSES+ I+ TIQ+RTQ IPDARTY
Sbjct: 61  AIGVLRKEKITIAPEDPAAVAQYAKVMKTVREKADLFSESQRIQYTIQTRTQDIPDARTY 120

Query: 171 LLTLKDIRIERGLNDQLGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 230
           LLTLK+IRI+RGL D LGAEAMM DALEK+EKE+KKPLMRNDKKGM+LLMAEFDK+N+K+
Sbjct: 121 LLTLKEIRIKRGLTDDLGAEAMMMDALEKVEKEIKKPLMRNDKKGMALLMAEFDKVNKKL 180

Query: 231 GIRREDLPKYEEQLELKISKAQLEDLKKDALEAMETQKKR 271
           GI+REDLPKYEEQLELKI+KAQLE+LKKDALEAMETQKKR
Sbjct: 181 GIQREDLPKYEEQLELKIAKAQLEELKKDALEAMETQKKR 220

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BLAST of CmoCh07G007830 vs. TrEMBL
Match: M5VZV0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010675mg PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.6e-87
Identity = 172/220 (78.18%), Postives = 197/220 (89.55%), Query Frame = 1


Query: 51  MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAPRPALKGDETLKNIFLEVKKKFDT 110
           MAFSSRLLSKS+ + G   IL Q   IPVR+FA+EA RP LKGDE LKNIFL+VKKKF+T
Sbjct: 1   MAFSSRLLSKSRPLCGNGVILQQERVIPVRYFAKEANRPVLKGDEMLKNIFLDVKKKFET 60

Query: 111 AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLFSESEVIKNTIQSRTQGIPDARTY 170
           A+ + RKEKITIDPEDPAAV+QYAKVMK  REKADLFSES+ I++TIQSRTQ IPDARTY
Sbjct: 61  ALGILRKEKITIDPEDPAAVSQYAKVMKTIREKADLFSESQRIQHTIQSRTQDIPDARTY 120

Query: 171 LLTLKDIRIERGLNDQLGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 230
           LLTLK+IRI+RG+ D+LGAEAMM DALEK+E ELKKPL+RNDKKGM+LL AEF+KIN+K+
Sbjct: 121 LLTLKEIRIKRGITDELGAEAMMMDALEKVENELKKPLLRNDKKGMALLQAEFEKINKKL 180

Query: 231 GIRREDLPKYEEQLELKISKAQLEDLKKDALEAMETQKKR 271
           GIR+EDLPKYEEQLELK +KAQLE+LKKDALEAMETQKKR
Sbjct: 181 GIRKEDLPKYEEQLELKKAKAQLEELKKDALEAMETQKKR 220

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BLAST of CmoCh07G007830 vs. TAIR10
Match: AT2G21870.1 (AT2G21870.1 copper ion binding;cobalt ion binding;zinc ion binding)

HSP 1 Score: 292.7 bits (748), Expect = 2.3e-79
Identity = 146/220 (66.36%), Postives = 184/220 (83.64%), Query Frame = 1


Query: 51  MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAPRPALKGDETLKNIFLEVKKKFDT 110
           MA++SR LS+SKQ+ GG  IL Q +AIPVR FA+EA RP  KGDE LK +F ++K KF  
Sbjct: 1   MAYASRFLSRSKQLQGGLVILQQQHAIPVRAFAKEAARPTFKGDEMLKGVFFDIKNKFQA 60

Query: 111 AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLFSESEVIKNTIQSRTQGIPDARTY 170
           A+D+ RKEKIT+DPEDPAAV QYA VMK  R+KAD+FSES+ IK+ I + TQ IPDAR Y
Sbjct: 61  AVDILRKEKITLDPEDPAAVKQYANVMKTIRQKADMFSESQRIKHDIDTETQDIPDARAY 120

Query: 171 LLTLKDIRIERGLNDQLGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 230
           LL L++IR  RGL D+LGAEAMMF+ALEK+EK++KKPL+R+DKKGM LL+AEF+K N+K+
Sbjct: 121 LLKLQEIRTRRGLTDELGAEAMMFEALEKVEKDIKKPLLRSDKKGMDLLVAEFEKGNKKL 180

Query: 231 GIRREDLPKYEEQLELKISKAQLEDLKKDALEAMETQKKR 271
           GIR+EDLPKYEE LEL ++KAQL++LK DA+EAME+QKK+
Sbjct: 181 GIRKEDLPKYEENLELSMAKAQLDELKSDAVEAMESQKKK 220

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BLAST of CmoCh07G007830 vs. NCBI nr
Match: gi|659079200|ref|XP_008440128.1| (PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Cucumis melo])

HSP 1 Score: 360.9 bits (925), Expect = 2.0e-96
Identity = 187/220 (85.00%), Postives = 208/220 (94.55%), Query Frame = 1


Query: 51  MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAPRPALKGDETLKNIFLEVKKKFDT 110
           MA SSRLLSKSKQVLG +SILHQG+A PVRHFA+EA RPALKGDE LK+IFLEVKKKF+T
Sbjct: 1   MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDEMLKDIFLEVKKKFET 60

Query: 111 AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLFSESEVIKNTIQSRTQGIPDARTY 170
           A+ VF+KEKITIDP+DPAAVAQYAKVMK AREKADLFSES+ IK TIQ+RTQ IPDAR+Y
Sbjct: 61  ALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSESQRIKYTIQTRTQDIPDARSY 120

Query: 171 LLTLKDIRIERGLNDQLGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 230
           LL L++IRI+RGL+D LGAEAMMFDALEK+EKELKKPL+RNDKKGMS+LMAEFDKINQK+
Sbjct: 121 LLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180

Query: 231 GIRREDLPKYEEQLELKISKAQLEDLKKDALEAMETQKKR 271
           GIRREDLPKYEEQLELKISKAQLE++KKDALEAMETQKKR
Sbjct: 181 GIRREDLPKYEEQLELKISKAQLEEIKKDALEAMETQKKR 220

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BLAST of CmoCh07G007830 vs. NCBI nr
Match: gi|449448424|ref|XP_004141966.1| (PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Cucumis sativus])

HSP 1 Score: 360.5 bits (924), Expect = 2.6e-96
Identity = 188/220 (85.45%), Postives = 207/220 (94.09%), Query Frame = 1


Query: 51  MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAPRPALKGDETLKNIFLEVKKKFDT 110
           MA SSRLLSKSKQVLG +SILHQG+A PVRHFA+EA  PALKGDE LKNIFLEVKKKF+T
Sbjct: 1   MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAAPPALKGDEMLKNIFLEVKKKFET 60

Query: 111 AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLFSESEVIKNTIQSRTQGIPDARTY 170
           A+ VF+KEKITIDP+DPAAVAQYAKVMK AREKADLFSES+ IK TIQ+RTQ IPDAR+Y
Sbjct: 61  ALAVFKKEKITIDPDDPAAVAQYAKVMKLAREKADLFSESQRIKYTIQTRTQDIPDARSY 120

Query: 171 LLTLKDIRIERGLNDQLGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 230
           LL LK+IRI+RGL+D LGAEAMMFDALEK+EKELKKPL+RNDKKGMS+LMAEFDKINQK+
Sbjct: 121 LLALKEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSVLMAEFDKINQKL 180

Query: 231 GIRREDLPKYEEQLELKISKAQLEDLKKDALEAMETQKKR 271
           GIRREDLPKYEEQLELKISKAQLE++KKDALEAMETQKKR
Sbjct: 181 GIRREDLPKYEEQLELKISKAQLEEMKKDALEAMETQKKR 220

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BLAST of CmoCh07G007830 vs. NCBI nr
Match: gi|147819925|emb|CAN62814.1| (hypothetical protein VITISV_031883 [Vitis vinifera])

HSP 1 Score: 347.4 bits (890), Expect = 2.3e-92
Identity = 181/221 (81.90%), Postives = 203/221 (91.86%), Query Frame = 1


Query: 51  MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAPRPALKGDETLKNIFLEVKKKFDT 110
           MAFSSRLLSKSKQ+ G + IL Q +A+PVR FA+EA  PALKGDE LKNIFLEVKKKF+T
Sbjct: 1   MAFSSRLLSKSKQLYGSQIILQQQHAVPVRFFAKEAAPPALKGDEMLKNIFLEVKKKFET 60

Query: 111 AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLFSESEVIKNTIQSRTQGIPDARTY 170
           A+ V RKEKITIDPEDPAAV QYAKVMK  REKADLFSES+ I+ TIQ+RTQGIPDARTY
Sbjct: 61  AMGVLRKEKITIDPEDPAAVNQYAKVMKTVREKADLFSESQRIQYTIQTRTQGIPDARTY 120

Query: 171 LLTLKDIRIERGLNDQLGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 230
           LLTLK+IRI+RGL D+LGAEAMM DALEK+EKELKKPLMRNDKKGM+LLMAEFDK+N+K+
Sbjct: 121 LLTLKEIRIKRGLTDELGAEAMMMDALEKVEKELKKPLMRNDKKGMALLMAEFDKVNKKL 180

Query: 231 GIRREDLPKYEEQLELKISKAQLEDLKKDALEAMETQKKRR 272
           G+R+EDLPKYEEQLELKI+KAQLE+LKKDALEAMETQKKRR
Sbjct: 181 GVRKEDLPKYEEQLELKIAKAQLEELKKDALEAMETQKKRR 221

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BLAST of CmoCh07G007830 vs. NCBI nr
Match: gi|225438529|ref|XP_002279389.1| (PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Vitis vinifera])

HSP 1 Score: 345.5 bits (885), Expect = 8.6e-92
Identity = 180/220 (81.82%), Postives = 202/220 (91.82%), Query Frame = 1


Query: 51  MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAPRPALKGDETLKNIFLEVKKKFDT 110
           MAFSSRLLSKSKQ+ G + IL Q +A+PVR FA+EA  PALKGDE LKNIFLEVKKKF+T
Sbjct: 1   MAFSSRLLSKSKQLYGSQIILQQQHAVPVRFFAKEAAPPALKGDEMLKNIFLEVKKKFET 60

Query: 111 AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLFSESEVIKNTIQSRTQGIPDARTY 170
           A+ V RKEKITIDPEDPAAV QYAKVMK  REKADLFSES+ I+ TIQ+RTQGIPDARTY
Sbjct: 61  AMGVLRKEKITIDPEDPAAVNQYAKVMKTVREKADLFSESQRIQYTIQTRTQGIPDARTY 120

Query: 171 LLTLKDIRIERGLNDQLGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 230
           LLTLK+IRI+RGL D+LGAEAMM DALEK+EKELKKPLMRNDKKGM+LLMAEFDK+N+K+
Sbjct: 121 LLTLKEIRIKRGLTDELGAEAMMMDALEKVEKELKKPLMRNDKKGMALLMAEFDKVNKKL 180

Query: 231 GIRREDLPKYEEQLELKISKAQLEDLKKDALEAMETQKKR 271
           G+R+EDLPKYEEQLELKI+KAQLE+LKKDALEAMETQKKR
Sbjct: 181 GVRKEDLPKYEEQLELKIAKAQLEELKKDALEAMETQKKR 220

[Close]

BLAST of CmoCh07G007830 vs. NCBI nr
Match: gi|1009146765|ref|XP_015891046.1| (PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 340.9 bits (873), Expect = 2.1e-90
Identity = 179/220 (81.36%), Postives = 200/220 (90.91%), Query Frame = 1


Query: 51  MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAPRPALKGDETLKNIFLEVKKKFDT 110
           MAFSSRLLSKS+Q+ G R IL Q YAIPVR+FA+EA RPALKGDE LKNIFLEVK KF+T
Sbjct: 1   MAFSSRLLSKSRQLCGNRVILQQEYAIPVRYFAKEAGRPALKGDEMLKNIFLEVKNKFET 60

Query: 111 AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLFSESEVIKNTIQSRTQGIPDARTY 170
           A+ V RKEKITIDP+D AAVAQYAKVMK  REKADLFSES+ I+ TIQ+ T+ IPD RTY
Sbjct: 61  ALGVLRKEKITIDPDDDAAVAQYAKVMKTVREKADLFSESQRIQYTIQTLTKNIPDVRTY 120

Query: 171 LLTLKDIRIERGLNDQLGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 230
           LLTLK+IRI+RGL D+LGAEA+MFDALEK+EKELKKPL+RNDKKG +LLMAEFDKIN+K+
Sbjct: 121 LLTLKEIRIKRGLTDELGAEALMFDALEKVEKELKKPLLRNDKKGTALLMAEFDKINKKL 180

Query: 231 GIRREDLPKYEEQLELKISKAQLEDLKKDALEAMETQKKR 271
           GIRREDLPKYEEQLELKISKAQLE+LKKDALEAMETQKKR
Sbjct: 181 GIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKR 220

The following BLAST results are available for this feature:

BLAST of CmoCh07G007830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATP7_ARATH	4.2e-78	66.36	Probable ATP synthase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana GN=A...	[more]

BLAST of CmoCh07G007830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKY9_CUCSA	1.8e-96	85.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486940 PE=4 SV=1	[more]
A5ATU0_VITVI	1.6e-92	81.90	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031883 PE=4 SV=1	[more]
D7SW76_VITVI	6.0e-92	81.82	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01740 PE=4 SV=...	[more]
A0A059B853_EUCGR	2.0e-87	79.09	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04880 PE=4 SV=1	[more]
M5VZV0_PRUPE	2.6e-87	78.18	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010675mg PE=4 SV=1	[more]

BLAST of CmoCh07G007830 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21870.1	2.3e-79	66.36	copper ion binding;cobalt ion binding;zinc ion binding	[more]

BLAST of CmoCh07G007830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079200\|ref\|XP_008440128.1\|	2.0e-96	85.00	PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Cucumis melo]	[more]
gi\|449448424\|ref\|XP_004141966.1\|	2.6e-96	85.45	PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Cucumis sativus]	[more]
gi\|147819925\|emb\|CAN62814.1\|	2.3e-92	81.90	hypothetical protein VITISV_031883 [Vitis vinifera]	[more]
gi\|225438529\|ref\|XP_002279389.1\|	8.6e-92	81.82	PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Vitis vinifera]	[more]
gi\|1009146765\|ref\|XP_015891046.1\|	2.1e-90	81.36	PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

Vocabulary: **Biological Process**
Term	Definition
GO:0009555	pollen development

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009853	photorespiration
biological_process	GO:0009555	pollen development
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005753	mitochondrial proton-transporting ATP synthase complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G007830.1	CmoCh07G007830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 246..270 scor
None	No IPR available	PANTHER	PTHR36013	FAMILY NOT NAMED	coord: 52..271 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G007830	Cucsa.101520	Cucumber (Gy14) v1	cgycmoB0233
CmoCh07G007830	CmaCh03G010500	Cucurbita maxima (Rimu)	cmacmoB667
CmoCh07G007830	CmaCh07G007620	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G007830	Cla008486	Watermelon (97103) v1	cmowmB814
CmoCh07G007830	Csa6G486940	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G007830	MELO3C007468	Melon (DHL92) v3.5.1	cmomeB793
CmoCh07G007830	ClCG01G015980	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G007830	CSPI06G27130	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G007830	Lsi01G010820	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G007830	Cp4.1LG10g03100	Cucurbita pepo (Zucchini)	cmocpeB806
CmoCh07G007830	Cp4.1LG19g11720	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G007830	MELO3C007468.2	Melon (DHL92) v3.6.1	cmomedB896
CmoCh07G007830	CsaV3_6G042260	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G007830	Cla97C01G014970	Watermelon (97103) v2	cmowmbB849
CmoCh07G007830	Bhi03G001107	Wax gourd	cmowgoB1066
CmoCh07G007830	CsGy6G026470	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G007830	Carg00907	Silver-seed gourd	carcmoB0554

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G007830	CmoCh03G010470	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G007830	Silver-seed gourd	carcmoB1100