Carg00907 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00907
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	MALE GAMETOPHYTE DEFECTIVE 1
Location	Cucurbita_argyrosperma_scaffold_014 : 2070149 .. 2073212 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCTCTTCTCGTCTCTTGTCCAAATCCAAGCAGGTTTGTCCTTTTCCGCCATGGATCGGCTCACTTTACCCAACTTTTCATTCTCCCTCATTGTTCATGTTCAAATCAACTTTTAAGGATTGATATATGTGAGCGATTTCAATATCATTTCATATTCGTGTTTTGATTTTCGTTCTTCCGTTTTCTACTCCTGTGGATCCTGAAAATGGTGAAGTCTTTATCAGTTTTCCCCTCCCCTAATTCGATTTTCAATTCTTGGCTTTTGTAATTTGATACTCCCTGAAGGTTTCGGATTTTTTAACCGTTTATTTAGGATCTGGGATTTTAGGGTTTCTTTGGACGATGTGAAGTATGTAGGTTTCTGTGAATTTTGTTAACATTATCGGGACTTAGCTAAAGATAAAAACTTTAGACTCATTGTCTAGAAATGGTAATCTATAGATTTTTTTTATAAAAAAAGTGCTGAGAGACGTGATGATCATTGAATCATCTGCTTTACGTGGGTTTTATTTTTGTGCCCCTTCTTTGTTACAGGTGCTTGGCAGTCGGAGTATTTTACACCAGGGGCATGCTATTCCTGTTCGTCACTTCGCCGAAGAGGCTGCCCGACCGGCTCTGAAGGGAGATGGTGAGGCAAAAAACGCTCATTTAGTGAGAAAAAGGAAGAGAGAGAGAGGGCTATGAAGTTTGGTTTATGTCTATCACACAGTTGTAGTTATGTCATATATAAGTTAAATTGCATCAGAAATGTTTATATGAAGGCTATTAAGCTCCATGAATGGTGCATCAACTTCTCTATGTGCACATTGATCTTAAATATTCTGTGATTTGATTGATTTTTTCTTCTTTTTTTTTGTGGGTGCCAAAGGAATGCTGAAGAATATATTTTTGGAAGTGAAAAATAAGTTTGAGGCAGCAATTGATGTTTTACGGAAAGAGAAGATCACAATTGATCCAGATGATCCTGCTGCAGTAGCTCAATACGCAAAGGTCATGAAAATGGCAAGAGAGAAGTGAGTGTTTTTGCCGGATCACCACGTGTACATACTAGTACATGCTATTACGAACATATGTTCTTATGAATTCTGTGAGTTACAATTTAACCCTTTTTTCCTTCTTTGCAGGGCAGATTTATTCTCAGAAGCACAGGGAATCAAATACACTATTCAGACAAGAACCCAAGATATCCCTGATGCTAGAACATACTTACTGACACTGAAGGATATCCGGATCAAGTATGTTCCTGTTTTATGAACATGGATTCGTTGTCAACCTGACCAATAGGGTCTGCATTTCTCTCCTTGGCATGTTACTTTTTTTGGTATCATGAATATTTGATTTTCAAGGGTTCCAAGATCGTCAAGACTTGGAGACTTGGACCAGTATCAATCAATAAACCGATGAAAACCCCACGGAAAGGGGGAAAAATATCTCTCAAATCTTCAATACATCTACATGTTGTATAAAAGCTAAAATTTACTAACCACAATCCCGAACTCATCAGATATTAAATAAAGTTGATAAAAGAATGAATTAGTTGACTTGGTTAATCTTTTACTGCATATGAACACATATTAGCATCTGACTCAAGCAACAGTTTAGACCTTAGCTTTTTTTTCTCAATTCTCATTGCAACTTGTTCAGACTTCTTAGCCTTCTTTCCTCCATAATTTTTAGTCTGATCTCAAATGTTTTCGTTAACCAAAAAAATATGCGCTGTTTGGTTCTGGTATGGATTTGTTTATTCCCAACAGTAGGGAATTATATTTTAGGGGTATTTATTGCTCATGCATCCATTCTTGTGCTCGAAATCTGTGGCATTGATCTGATGTCTATTGCCAAGTACACAAGTTCATTGTTTTACTGTACTCTTTCGTTTCTTGACCTTATTCCCATGTATTTTTTCAGGAGAGGTCTCAGTGATGAGCTTGGTGCAGAAGCTATGATGTATGATGCTCTGGAAAAGGTTGAGAAAGAATTGAAGAAACCTCTCTTGAGGAATGATAAGAAAGGAATGTCTATTCTTATGGCTGAGTTCGACAAAATCAATCAAAAGTAAAATTCTAACTTTTCATATTTTCCGTTTATTTTGGCTCCATTCAAAAAAGTTGAGTGATTTATTAACAGACGGTTATGTTTGCCTGGACAATATACACATCTAAGATTGCCATCAAGAACAAAATGTCTTGTCAGAAAATAGAAGCCGTTGTGAACCCATTTTGGATATATGACGTGTTGTTCATCCTGAAGTTTTAGTGAAGAATGATATTCATTCTTATTATTTCTGCGCTTGCATGCCTATTTGGCAAGATACCCACCATTAGATTTCTTTTCTAATTTGACTTGTACACTAGTTTTTACCAGTCTAAATTTCTGAGGAAGGCCCAGTATAGTTGGTAGCCGTCCTACACGACAGTTGAACAATATTTGTAGGGATATACACAGTATTTTGATTATGTTTTAATTTCTTTAAATCAGGCTTGGAATTAAGAGGAAAGATCTACCCAAGTACGAGGAGCAGTTGGACATTTGTAGGGATATACACAGTATTTTGATTATGTTTTAATTTCTTTAAATCAGGCTTGGAATTAAGAGGAAAGATCTACCCAAGTACGAGGAGCAGTTGGAACTTAAAATGTCCAAGGCGCAATTGGAAGAGCTGAAGAAAGACGCTCTCGAGGCAATGGAAACTCAAAAGAAGCGGTACGTAGATTGTGGTTTATGATGATTATTATACTGCAAAGAACATAGCCTTAGTTGATAGTTTTAGTTATTAGCAGACGATTCTGTGTGCAGAGTACCGTCTGTTATCAAGTAGTTATTAGCAGACGATTCGAATGAATGTCTGTCGCTTTGATCAGCCAGATAGACATATACATATTTCTCCAACATGTATAATCTGGCACCCGTATTTGGTTGGCATTACTGTAGATTTGTAGGCTCTTATAGAATCTTTATTAAAACTTATACAACTTTTCCACTCTTTGTTTTCAGTGAGGAGTTTAAAGACGAGGCAATGATCGATCCAAAGTCGTTAGACGTGAGAAAGTTCCTGTAG

mRNA sequence

ATGGCTTTCTCTTCTCGTCTCTTGTCCAAATCCAAGCAGGTGCTTGGCAGTCGGAGTATTTTACACCAGGGGCATGCTATTCCTGTTCGTCACTTCGCCGAAGAGGCTGCCCGACCGGCTCTGAAGGGAGATGGAATGCTGAAGAATATATTTTTGGAAGTGAAAAATAAGTTTGAGGCAGCAATTGATGTTTTACGGAAAGAGAAGATCACAATTGATCCAGATGATCCTGCTGCAGTAGCTCAATACGCAAAGGTCATGAAAATGGCAAGAGAGAAGGCAGATTTATTCTCAGAAGCACAGGGAATCAAATACACTATTCAGACAAGAACCCAAGATATCCCTGATGCTAGAACATACTTACTGACACTGAAGGATATCCGGATCAAGAGAGGTCTCAGTGATGAGCTTGGTGCAGAAGCTATGATGTATGATGCTCTGGAAAAGGTTGAGAAAGAATTGAAGAAACCTCTCTTGAGGAATGATAAGAAAGGAATGTCTATTCTTATGGCTGAGTTCGACAAAATCAATCAAAAGCTTGGAATTAAGAGGAAAGATCTACCCAAGCTTGGAATTAAGAGGAAAGATCTACCCAAGTACGAGGAGCAGTTGGAACTTAAAATGTCCAAGGCGCAATTGGAAGAGCTGAAGAAAGACGCTCTCGAGGCAATGGAAACTCAAAAGAAGCGTGAGGAGTTTAAAGACGAGGCAATGATCGATCCAAAGTCGTTAGACGTGAGAAAGTTCCTGTAG

Coding sequence (CDS)

ATGGCTTTCTCTTCTCGTCTCTTGTCCAAATCCAAGCAGGTGCTTGGCAGTCGGAGTATTTTACACCAGGGGCATGCTATTCCTGTTCGTCACTTCGCCGAAGAGGCTGCCCGACCGGCTCTGAAGGGAGATGGAATGCTGAAGAATATATTTTTGGAAGTGAAAAATAAGTTTGAGGCAGCAATTGATGTTTTACGGAAAGAGAAGATCACAATTGATCCAGATGATCCTGCTGCAGTAGCTCAATACGCAAAGGTCATGAAAATGGCAAGAGAGAAGGCAGATTTATTCTCAGAAGCACAGGGAATCAAATACACTATTCAGACAAGAACCCAAGATATCCCTGATGCTAGAACATACTTACTGACACTGAAGGATATCCGGATCAAGAGAGGTCTCAGTGATGAGCTTGGTGCAGAAGCTATGATGTATGATGCTCTGGAAAAGGTTGAGAAAGAATTGAAGAAACCTCTCTTGAGGAATGATAAGAAAGGAATGTCTATTCTTATGGCTGAGTTCGACAAAATCAATCAAAAGCTTGGAATTAAGAGGAAAGATCTACCCAAGCTTGGAATTAAGAGGAAAGATCTACCCAAGTACGAGGAGCAGTTGGAACTTAAAATGTCCAAGGCGCAATTGGAAGAGCTGAAGAAAGACGCTCTCGAGGCAATGGAAACTCAAAAGAAGCGTGAGGAGTTTAAAGACGAGGCAATGATCGATCCAAAGTCGTTAGACGTGAGAAAGTTCCTGTAG

Protein sequence

MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEAAIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTYLLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKLGIKRKDLPKLGIKRKDLPKYEEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMIDPKSLDVRKFL

Homology

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BLAST of Carg00907 vs. NCBI nr
Match: XP_022950285.1 (probable ATP synthase 24 kDa subunit, mitochondrial [Cucurbita moschata])

HSP 1 Score: 424.5 bits (1090), Expect = 2.5e-115
Identity = 230/250 (92.00%), Postives = 234/250 (93.60%), Query Frame = 0


Query: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60
           MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA
Sbjct: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60

Query: 61  AIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTY 120
           AIDV RKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEA+GIKYTIQTRTQDIPDARTY
Sbjct: 61  AIDVFRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAEGIKYTIQTRTQDIPDARTY 120

Query: 121 LLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180
           LLTLKDIRIKRGLSDELGAEAMM+DALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL
Sbjct: 121 LLTLKDIRIKRGLSDELGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180

Query: 181 GIKRKDLXXXXXXXXXXXXXXEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240
           GIKRKDL              EQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAM+D
Sbjct: 181 GIKRKDL----------PKYEEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMMD 240

Query: 241 PKSLDVRKFL 251
           PKSLD+R FL
Sbjct: 241 PKSLDLRNFL 240

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BLAST of Carg00907 vs. NCBI nr
Match: XP_022977838.1 (probable ATP synthase 24 kDa subunit, mitochondrial [Cucurbita maxima])

HSP 1 Score: 407.5 bits (1046), Expect = 3.2e-110
Identity = 224/250 (89.60%), Postives = 228/250 (91.20%), Query Frame = 0


Query: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60
           MAFSSRLLSKSKQVLGS+SILHQGHAIPVRHFA+EAARPALKGD MLKNIFLEVK KFE 
Sbjct: 1   MAFSSRLLSKSKQVLGSQSILHQGHAIPVRHFAKEAARPALKGDDMLKNIFLEVKKKFET 60

Query: 61  AIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTY 120
           AIDV RKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQ IKYTIQTRTQDIPDARTY
Sbjct: 61  AIDVFRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQRIKYTIQTRTQDIPDARTY 120

Query: 121 LLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180
           LLTLKDIRIKR LSDELGAEAMM+DALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL
Sbjct: 121 LLTLKDIRIKRHLSDELGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180

Query: 181 GIKRKDLXXXXXXXXXXXXXXEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240
           GIKR+DL              EQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID
Sbjct: 181 GIKREDL----------PKYEEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240

Query: 241 PKSLDVRKFL 251
            KSLDVR FL
Sbjct: 241 TKSLDVRNFL 240

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BLAST of Carg00907 vs. NCBI nr
Match: XP_023544831.1 (probable ATP synthase 24 kDa subunit, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.0 bits (1042), Expect = 9.4e-110
Identity = 224/250 (89.60%), Postives = 226/250 (90.40%), Query Frame = 0


Query: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60
           MAFSSRLLSKSKQVLG  SILHQGHAIPVRHFAEEAARPALKGD MLKNIFLEVK KFE 
Sbjct: 1   MAFSSRLLSKSKQVLGIPSILHQGHAIPVRHFAEEAARPALKGDEMLKNIFLEVKKKFET 60

Query: 61  AIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTY 120
           AIDV RKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQ IKYTIQTRTQDIPDARTY
Sbjct: 61  AIDVFRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQRIKYTIQTRTQDIPDARTY 120

Query: 121 LLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180
           LLTLKDIRIKR LSDELGAEAMM+DALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL
Sbjct: 121 LLTLKDIRIKRSLSDELGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180

Query: 181 GIKRKDLXXXXXXXXXXXXXXEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240
           GIKR+DL              EQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID
Sbjct: 181 GIKREDL----------PKYEEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240

Query: 241 PKSLDVRKFL 251
            KSLDVR FL
Sbjct: 241 TKSLDVRNFL 240

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BLAST of Carg00907 vs. NCBI nr
Match: XP_022132532.1 (probable ATP synthase 24 kDa subunit, mitochondrial [Momordica charantia])

HSP 1 Score: 396.0 bits (1016), Expect = 9.7e-107
Identity = 213/250 (85.20%), Postives = 227/250 (90.80%), Query Frame = 0


Query: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60
           MA SSRLLSKSKQVLGS+SILHQGHAIPVRHFA+EAARPALKGD MLKNIFLEVK KFE 
Sbjct: 1   MALSSRLLSKSKQVLGSQSILHQGHAIPVRHFAKEAARPALKGDEMLKNIFLEVKKKFET 60

Query: 61  AIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTY 120
           A+DV RKEKITIDPDDPAAVAQYAKVMK+AREKADLFSE+Q IKYTIQTRTQDIPDARTY
Sbjct: 61  ALDVFRKEKITIDPDDPAAVAQYAKVMKLAREKADLFSESQRIKYTIQTRTQDIPDARTY 120

Query: 121 LLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180
           LLTLKDIRIKRGL+DELGAEA+M+DALEKVEKELKKPLLRNDKKGMS+LMAEFDKINQKL
Sbjct: 121 LLTLKDIRIKRGLTDELGAEALMFDALEKVEKELKKPLLRNDKKGMSVLMAEFDKINQKL 180

Query: 181 GIKRKDLXXXXXXXXXXXXXXEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240
           GI+R+DL              EQLELK+SKAQL+ELKKDALEAMETQKKREEFKDE M+D
Sbjct: 181 GIRREDL----------PKYEEQLELKISKAQLDELKKDALEAMETQKKREEFKDEEMVD 240

Query: 241 PKSLDVRKFL 251
            KSLDVR FL
Sbjct: 241 TKSLDVRNFL 240

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BLAST of Carg00907 vs. NCBI nr
Match: XP_023518577.1 (probable ATP synthase 24 kDa subunit, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-105
Identity = 210/250 (84.00%), Postives = 226/250 (90.40%), Query Frame = 0


Query: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60
           MAFSSRLLSKSKQVLG RSILHQG+AIPVRHFAEEAARPALKGD MLKNIFLEVK KFE 
Sbjct: 1   MAFSSRLLSKSKQVLGGRSILHQGYAIPVRHFAEEAARPALKGDEMLKNIFLEVKKKFET 60

Query: 61  AIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTY 120
           AIDV RKEKITIDP+DPAAVAQYAKVMK AREKADL SE++ IKYTIQ+RTQDIPDARTY
Sbjct: 61  AIDVFRKEKITIDPEDPAAVAQYAKVMKQAREKADLLSESERIKYTIQSRTQDIPDARTY 120

Query: 121 LLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180
           LLTLKDIRIKRGL+DELGAEAMM+DALEK+EKELKKPL+RNDKKGMS+LMAEFDKINQK+
Sbjct: 121 LLTLKDIRIKRGLNDELGAEAMMFDALEKIEKELKKPLMRNDKKGMSLLMAEFDKINQKI 180

Query: 181 GIKRKDLXXXXXXXXXXXXXXEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240
           GI+R+DL              EQLELK+SKAQLE+LKKDALEAMETQKKREEFKDEAM+D
Sbjct: 181 GIRREDL----------PKYEEQLELKISKAQLEDLKKDALEAMETQKKREEFKDEAMVD 240

Query: 241 PKSLDVRKFL 251
            KSLDVR FL
Sbjct: 241 TKSLDVRNFL 240

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BLAST of Carg00907 vs. TAIR10
Match: AT2G21870.1 (copper ion binding;cobalt ion binding;zinc ion binding)

HSP 1 Score: 310.8 bits (795), Expect = 7.4e-85
Identity = 162/250 (64.80%), Postives = 203/250 (81.20%), Query Frame = 0


Query: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60
           MA++SR LS+SKQ+ G   IL Q HAIPVR FA+EAARP  KGD MLK +F ++KNKF+A
Sbjct: 1   MAYASRFLSRSKQLQGGLVILQQQHAIPVRAFAKEAARPTFKGDEMLKGVFFDIKNKFQA 60

Query: 61  AIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTY 120
           A+D+LRKEKIT+DP+DPAAV QYA VMK  R+KAD+FSE+Q IK+ I T TQDIPDAR Y
Sbjct: 61  AVDILRKEKITLDPEDPAAVKQYANVMKTIRQKADMFSESQRIKHDIDTETQDIPDARAY 120

Query: 121 LLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180
           LL L++IR +RGL+DELGAEAMM++ALEKVEK++KKPLLR+DKKGM +L+AEF+K N+KL
Sbjct: 121 LLKLQEIRTRRGLTDELGAEAMMFEALEKVEKDIKKPLLRSDKKGMDLLVAEFEKGNKKL 180

Query: 181 GIKRKDLXXXXXXXXXXXXXXEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240
           GI+++DL              E LEL M+KAQL+ELK DA+EAME+QKK+EEF+DE M D
Sbjct: 181 GIRKEDL----------PKYEENLELSMAKAQLDELKSDAVEAMESQKKKEEFQDEEMPD 240

Query: 241 PKSLDVRKFL 251
            KSLD+R F+
Sbjct: 241 VKSLDIRNFI 240

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BLAST of Carg00907 vs. Swiss-Prot
Match: sp|Q9SJ12|ATP7_ARATH (Probable ATP synthase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g21870 PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-83
Identity = 162/250 (64.80%), Postives = 203/250 (81.20%), Query Frame = 0


Query: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60
           MA++SR LS+SKQ+ G   IL Q HAIPVR FA+EAARP  KGD MLK +F ++KNKF+A
Sbjct: 1   MAYASRFLSRSKQLQGGLVILQQQHAIPVRAFAKEAARPTFKGDEMLKGVFFDIKNKFQA 60

Query: 61  AIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTY 120
           A+D+LRKEKIT+DP+DPAAV QYA VMK  R+KAD+FSE+Q IK+ I T TQDIPDAR Y
Sbjct: 61  AVDILRKEKITLDPEDPAAVKQYANVMKTIRQKADMFSESQRIKHDIDTETQDIPDARAY 120

Query: 121 LLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180
           LL L++IR +RGL+DELGAEAMM++ALEKVEK++KKPLLR+DKKGM +L+AEF+K N+KL
Sbjct: 121 LLKLQEIRTRRGLTDELGAEAMMFEALEKVEKDIKKPLLRSDKKGMDLLVAEFEKGNKKL 180

Query: 181 GIKRKDLXXXXXXXXXXXXXXEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240
           GI+++DL              E LEL M+KAQL+ELK DA+EAME+QKK+EEF+DE M D
Sbjct: 181 GIRKEDL----------PKYEENLELSMAKAQLDELKSDAVEAMESQKKKEEFQDEEMPD 240

Query: 241 PKSLDVRKFL 251
            KSLD+R F+
Sbjct: 241 VKSLDIRNFI 240

[Close]

BLAST of Carg00907 vs. TrEMBL
Match: tr|A0A1S3B0D0|A0A1S3B0D0_CUCME (probable ATP synthase 24 kDa subunit, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484687 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.3e-103
Identity = 207/250 (82.80%), Postives = 224/250 (89.60%), Query Frame = 0


Query: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60
           MA SSRLLSKSKQVLGS+SILHQGHA PVRHFA+EAARPALKGD MLK+IFLEVK KFE 
Sbjct: 1   MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDEMLKDIFLEVKKKFET 60

Query: 61  AIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTY 120
           A+ V +KEKITIDPDDPAAVAQYAKVMKMAREKADLFSE+Q IKYTIQTRTQDIPDAR+Y
Sbjct: 61  ALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSESQRIKYTIQTRTQDIPDARSY 120

Query: 121 LLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180
           LL L++IRIKRGLSD+LGAEAMM+DALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL
Sbjct: 121 LLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180

Query: 181 GIKRKDLXXXXXXXXXXXXXXEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240
           GI+R+DL              EQLELK+SKAQLEE+KKDALEAMETQKKREEFKD+ M+D
Sbjct: 181 GIRREDL----------PKYEEQLELKISKAQLEEIKKDALEAMETQKKREEFKDDEMVD 240

Query: 241 PKSLDVRKFL 251
            KSLDVR FL
Sbjct: 241 TKSLDVRNFL 240

[Close]

BLAST of Carg00907 vs. TrEMBL
Match: tr|A0A0A0KKY9|A0A0A0KKY9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486940 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 5.6e-103
Identity = 206/250 (82.40%), Postives = 223/250 (89.20%), Query Frame = 0


Query: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60
           MA SSRLLSKSKQVLGS+SILHQGHA PVRHFA+EAA PALKGD MLKNIFLEVK KFE 
Sbjct: 1   MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAAPPALKGDEMLKNIFLEVKKKFET 60

Query: 61  AIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTY 120
           A+ V +KEKITIDPDDPAAVAQYAKVMK+AREKADLFSE+Q IKYTIQTRTQDIPDAR+Y
Sbjct: 61  ALAVFKKEKITIDPDDPAAVAQYAKVMKLAREKADLFSESQRIKYTIQTRTQDIPDARSY 120

Query: 121 LLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180
           LL LK+IRIKRGLSD+LGAEAMM+DALEKVEKELKKPLLRNDKKGMS+LMAEFDKINQKL
Sbjct: 121 LLALKEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSVLMAEFDKINQKL 180

Query: 181 GIKRKDLXXXXXXXXXXXXXXEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240
           GI+R+DL              EQLELK+SKAQLEE+KKDALEAMETQKKREEFKD+ M+D
Sbjct: 181 GIRREDL----------PKYEEQLELKISKAQLEEMKKDALEAMETQKKREEFKDDEMVD 240

Query: 241 PKSLDVRKFL 251
            KSLDVR FL
Sbjct: 241 TKSLDVRNFL 240

[Close]

BLAST of Carg00907 vs. TrEMBL
Match: tr|D7SW76|D7SW76_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0031g01740 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 3.0e-96
Identity = 194/250 (77.60%), Postives = 218/250 (87.20%), Query Frame = 0


Query: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60
           MAFSSRLLSKSKQ+ GS+ IL Q HA+PVR FA+EAA PALKGD MLKNIFLEVK KFE 
Sbjct: 1   MAFSSRLLSKSKQLYGSQIILQQQHAVPVRFFAKEAAPPALKGDEMLKNIFLEVKKKFET 60

Query: 61  AIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTY 120
           A+ VLRKEKITIDP+DPAAV QYAKVMK  REKADLFSE+Q I+YTIQTRTQ IPDARTY
Sbjct: 61  AMGVLRKEKITIDPEDPAAVNQYAKVMKTVREKADLFSESQRIQYTIQTRTQGIPDARTY 120

Query: 121 LLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180
           LLTLK+IRIKRGL+DELGAEAMM DALEKVEKELKKPL+RNDKKGM++LMAEFDK+N+KL
Sbjct: 121 LLTLKEIRIKRGLTDELGAEAMMMDALEKVEKELKKPLMRNDKKGMALLMAEFDKVNKKL 180

Query: 181 GIKRKDLXXXXXXXXXXXXXXEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240
           G++++DL              EQLELK++KAQLEELKKDALEAMETQKKREEFKDEAM+D
Sbjct: 181 GVRKEDL----------PKYEEQLELKIAKAQLEELKKDALEAMETQKKREEFKDEAMVD 240

Query: 241 PKSLDVRKFL 251
            KSLD+R F+
Sbjct: 241 VKSLDIRNFI 240

[Close]

BLAST of Carg00907 vs. TrEMBL
Match: tr|A0A2I4DJP9|A0A2I4DJP9_9ROSI (probable ATP synthase 24 kDa subunit, mitochondrial isoform X2 OS=Juglans regia OX=51240 GN=LOC108980809 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 6.6e-96
Identity = 195/250 (78.00%), Postives = 215/250 (86.00%), Query Frame = 0


Query: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60
           MAFSSRLLSKSKQ  GS+  L Q HAIPVR FA++A  PALKGD MLK IF EVKNKFE 
Sbjct: 3   MAFSSRLLSKSKQFCGSQITLQQTHAIPVRFFAKQADPPALKGDNMLKGIFFEVKNKFET 62

Query: 61  AIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTY 120
           A+ VLRKEKITIDP+DPAAVAQYAKVMK  REKADLFSE+Q I+YTIQTRTQDIPDARTY
Sbjct: 63  ALGVLRKEKITIDPEDPAAVAQYAKVMKTIREKADLFSESQRIQYTIQTRTQDIPDARTY 122

Query: 121 LLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180
           LLTLK+IRIKRGL+DELGAEAMM+DALEKVEKELKKPL+RNDKKGM++LMAEFDKIN+KL
Sbjct: 123 LLTLKEIRIKRGLTDELGAEAMMFDALEKVEKELKKPLMRNDKKGMALLMAEFDKINKKL 182

Query: 181 GIKRKDLXXXXXXXXXXXXXXEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240
           GI+R+DL              EQLELK+SKAQLEELKKDALEAMETQKKREEFKDE  +D
Sbjct: 183 GIRREDL----------PKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEETVD 242

Query: 241 PKSLDVRKFL 251
            KSLD+R F+
Sbjct: 243 VKSLDIRNFI 242

[Close]

BLAST of Carg00907 vs. TrEMBL
Match: tr|A5ATU0|A5ATU0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_031883 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 4.3e-95
Identity = 192/250 (76.80%), Postives = 216/250 (86.40%), Query Frame = 0


Query: 1   MAFSSRLLSKSKQVLGSRSILHQGHAIPVRHFAEEAARPALKGDGMLKNIFLEVKNKFEA 60
           MAFSSRLLSKSKQ+ GS+ IL Q HA+PVR FA+EAA PALKGD MLKNIFLEVK KFE 
Sbjct: 1   MAFSSRLLSKSKQLYGSQIILQQQHAVPVRFFAKEAAPPALKGDEMLKNIFLEVKKKFET 60

Query: 61  AIDVLRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQGIKYTIQTRTQDIPDARTY 120
           A+ VLRKEKITIDP+DPAAV QYAKVMK  REKADLFSE+Q I+YTIQTRTQ IPDARTY
Sbjct: 61  AMGVLRKEKITIDPEDPAAVNQYAKVMKTVREKADLFSESQRIQYTIQTRTQGIPDARTY 120

Query: 121 LLTLKDIRIKRGLSDELGAEAMMYDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKL 180
           LLTLK+IRIKRGL+DELGAEAMM DALEKVEKELKKPL+RNDKKGM++LMAEFDK+N+KL
Sbjct: 121 LLTLKEIRIKRGLTDELGAEAMMMDALEKVEKELKKPLMRNDKKGMALLMAEFDKVNKKL 180

Query: 181 GIKRKDLXXXXXXXXXXXXXXEQLELKMSKAQLEELKKDALEAMETQKKREEFKDEAMID 240
           G++++DL              EQLELK++KAQLEELKKDALEAMETQKKR  FKDEAM+D
Sbjct: 181 GVRKEDL----------PKYEEQLELKIAKAQLEELKKDALEAMETQKKRRNFKDEAMVD 240

Query: 241 PKSLDVRKFL 251
            KSLD+R F+
Sbjct: 241 VKSLDIRNFI 240

The following BLAST results are available for this feature:

BLAST of Carg00907 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950285.1	2.5e-115	92.00	probable ATP synthase 24 kDa subunit, mitochondrial [Cucurbita moschata]	[more]
XP_022977838.1	3.2e-110	89.60	probable ATP synthase 24 kDa subunit, mitochondrial [Cucurbita maxima]	[more]
XP_023544831.1	9.4e-110	89.60	probable ATP synthase 24 kDa subunit, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022132532.1	9.7e-107	85.20	probable ATP synthase 24 kDa subunit, mitochondrial [Momordica charantia]	[more]
XP_023518577.1	1.8e-105	84.00	probable ATP synthase 24 kDa subunit, mitochondrial [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg00907 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21870.1	7.4e-85	64.80	copper ion binding;cobalt ion binding;zinc ion binding	[more]

BLAST of Carg00907 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJ12\|ATP7_ARATH	1.3e-83	64.80	Probable ATP synthase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Carg00907 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B0D0\|A0A1S3B0D0_CUCME	3.3e-103	82.80	probable ATP synthase 24 kDa subunit, mitochondrial OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A0A0KKY9\|A0A0A0KKY9_CUCSA	5.6e-103	82.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486940 PE=4 SV=1	[more]
tr\|D7SW76\|D7SW76_VITVI	3.0e-96	77.60	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0031g01740 PE=4 SV=...	[more]
tr\|A0A2I4DJP9\|A0A2I4DJP9_9ROSI	6.6e-96	78.00	probable ATP synthase 24 kDa subunit, mitochondrial isoform X2 OS=Juglans regia ...	[more]
tr\|A5ATU0\|A5ATU0_VITVI	4.3e-95	76.80	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_031883 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009555	pollen development

Vocabulary: **INTERPRO**
Term	Definition
IPR031432	MGP1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009555	pollen development
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00907-RA	Carg00907-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 199..230
IPR031432	MALE GAMETOPHYTE DEFECTIVE 1	PFAM	PF15704	Mt_ATP_synt	coord: 33..229 e-value: 1.2E-72 score: 243.6
IPR031432	MALE GAMETOPHYTE DEFECTIVE 1	PANTHER	PTHR36013	FAMILY NOT NAMED	coord: 189..250 coord: 1..190

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00907	Cla008486	Watermelon (97103) v1	carwmB0405
Carg00907	Csa6G486940	Cucumber (Chinese Long) v2	carcuB0441
Carg00907	MELO3C007468	Melon (DHL92) v3.5.1	carmeB0414
Carg00907	ClCG01G015980	Watermelon (Charleston Gray)	carwcgB0397
Carg00907	CSPI06G27130	Wild cucumber (PI 183967)	carcpiB0446
Carg00907	Cucsa.101520	Cucumber (Gy14) v1	carcgyB0467
Carg00907	CmaCh07G007630	Cucurbita maxima (Rimu)	carcmaB0571
Carg00907	CmaCh03G010500	Cucurbita maxima (Rimu)	carcmaB0567
Carg00907	CmoCh07G007830	Cucurbita moschata (Rifu)	carcmoB0554
Carg00907	CmoCh03G010470	Cucurbita moschata (Rifu)	carcmoB0551
Carg00907	Lsi01G010820	Bottle gourd (USVL1VR-Ls)	carlsiB364
Carg00907	Cp4.1LG10g03100	Cucurbita pepo (Zucchini)	carcpeB0554
Carg00907	Cp4.1LG19g11720	Cucurbita pepo (Zucchini)	carcpeB0563
Carg00907	CsGy6G026470	Cucumber (Gy14) v2	carcgybB0418
Carg00907	MELO3C007468.2	Melon (DHL92) v3.6.1	carmedB0418
Carg00907	CsaV3_6G042260	Cucumber (Chinese Long) v3	carcucB0442
Carg00907	Cla97C01G014970	Watermelon (97103) v2	carwmbB0426
Carg00907	Bhi03G001107	Wax gourd	carwgoB0492

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00907	Silver-seed gourd	carcarB428
Carg00907	Cucurbita maxima (Rimu)	carcmaB0565
Carg00907	Cucurbita pepo (Zucchini)	carcpeB0560
Carg00907	Melon (DHL92) v3.5.1	carmeB0403