CmoCh07G002210 (gene) Cucurbita moschata (Rifu)

NameCmoCh07G002210
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTransmembrane protein, putative
LocationCmo_Chr07 : 1118057 .. 1119246 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGAGAGAGAGAGAGAGAGAGAGGCATACCCATTGGCATATACGAAGATTATGTGAACTTTGGTACCGAAATCAAGCCTGATTGTGATGTGTGACCGAGAATAAACTAACCCATTTTTCTTCACCAAATGGCTAATCCCTTCTTGAATCTGCAGAAGCCCCTCGTAATTATCACCTCTTCCTTCAGATTCGAATCCCCCAATTCATATAAAACCCTAAACCCCTCTGCAAATCCCCCAATTCATTTCCTACATCTTCCTTTTGCGTTCCGATTTCCAGAGCCGAAACCCATGGTTTCAGAGGTTAACCGACTGAACCACTAACATTGCTTCTTTAGCTTGGCTTTGTGGCTTTGATTTTGATGCTAATTTTGTAGGATCGAGACATGATCAATGGTTGGCCACTGGGACTCGAGGTTATGAACACCAGAGTTCGAATGGCAGACTCACAGAGGTTACCGCCCACGGATCCCTTCCCTACTTCGCACATTCCTTCAAGGAGTTTCTCCTCTTTGTCTTCCTCTGAACTCGACACCATGGTTCGTAAACTTATGATCTGCATTTCTTTTTTCAAATTAGAGTCGATGAACTTTCCATGATTGCAGCCAAACAGACCTCGTAATTAATTTATCTTTGACATTTACCTCTGTTTTGGCTTCTTCTCTTCCTGGTGTTGACAGTCCACGGCTTCGTTCTTCCAAGACCACAGCGTATCTCTCGGCCGGCTCATCGGAATAAGGCCGGGCGACAAGACGTGGTTGTACCTCCCGACGGACGAGAATGCGTGTGTATCGGTAAATTCCGCAAGCTTAGATACGAGGAAAACGAAGAGCGCTGAAATATCAGGCCGAATCTGCATTCCGATTCTGATCGGTATCATGTTGAAGATGATCAGAAGTCGAAGAAATTCGAGAAGTTGAAGAAGGAAACGAGATGAAGTGAAATTGGGCGAACGTAATTACAAATTGCGTCAGTTGTTTTTCTTTGCGAGTTTTGGAACATTGTTGATGGAAGACGTGGTTATAGGAAATCTGGAACTTCGTTGCTTGCTTCTGAATTCAATTTATCTGAAGAATCTGAATCAAAATTGAAAAGCGTTTAAGCTTTCCTTTTCCCGATCACTTTCCTGAGAAACAAACAGAAACGAGATACCCAGATTTAATCCAAAAGAATCTGGATTTAGTGTCAAG

mRNA sequence

GAGAGAGAGAGAGAGAGAGAGAGAGGCATACCCATTGGCATATACGAAGATTATGTGAACTTTGGTACCGAAATCAAGCCTGATTGTGATGTGTGACCGAGAATAAACTAACCCATTTTTCTTCACCAAATGGCTAATCCCTTCTTGAATCTGCAGAAGCCCCTCGTAATTATCACCTCTTCCTTCAGATTCGAATCCCCCAATTCATATAAAACCCTAAACCCCTCTGCAAATCCCCCAATTCATTTCCTACATCTTCCTTTTGCGTTCCGATTTCCAGAGCCGAAACCCATGGTTTCAGAGGATCGAGACATGATCAATGGTTGGCCACTGGGACTCGAGGTTATGAACACCAGAGTTCGAATGGCAGACTCACAGAGGTTACCGCCCACGGATCCCTTCCCTACTTCGCACATTCCTTCAAGGAGTTTCTCCTCTTTGTCTTCCTCTGAACTCGACACCATGTCCACGGCTTCGTTCTTCCAAGACCACAGCGTATCTCTCGGCCGGCTCATCGGAATAAGGCCGGGCGACAAGACGTGGTTGTACCTCCCGACGGACGAGAATGCGTGTGTATCGGTAAATTCCGCAAGCTTAGATACGAGGAAAACGAAGAGCGCTGAAATATCAGGCCGAATCTGCATTCCGATTCTGATCGGTATCATGTTGAAGATGATCAGAAGTCGAAGAAATTCGAGAAGTTGAAGAAGGAAACGAGATGAAGTGAAATTGGGCGAACGTAATTACAAATTGCGTCAGTTGTTTTTCTTTGCGAGTTTTGGAACATTGTTGATGGAAGACGTGGTTATAGGAAATCTGGAACTTCGTTGCTTGCTTCTGAATTCAATTTATCTGAAGAATCTGAATCAAAATTGAAAAGCGTTTAAGCTTTCCTTTTCCCGATCACTTTCCTGAGAAACAAACAGAAACGAGATACCCAGATTTAATCCAAAAGAATCTGGATTTAGTGTCAAG

Coding sequence (CDS)

ATGGCTAATCCCTTCTTGAATCTGCAGAAGCCCCTCGTAATTATCACCTCTTCCTTCAGATTCGAATCCCCCAATTCATATAAAACCCTAAACCCCTCTGCAAATCCCCCAATTCATTTCCTACATCTTCCTTTTGCGTTCCGATTTCCAGAGCCGAAACCCATGGTTTCAGAGGATCGAGACATGATCAATGGTTGGCCACTGGGACTCGAGGTTATGAACACCAGAGTTCGAATGGCAGACTCACAGAGGTTACCGCCCACGGATCCCTTCCCTACTTCGCACATTCCTTCAAGGAGTTTCTCCTCTTTGTCTTCCTCTGAACTCGACACCATGTCCACGGCTTCGTTCTTCCAAGACCACAGCGTATCTCTCGGCCGGCTCATCGGAATAAGGCCGGGCGACAAGACGTGGTTGTACCTCCCGACGGACGAGAATGCGTGTGTATCGGTAAATTCCGCAAGCTTAGATACGAGGAAAACGAAGAGCGCTGAAATATCAGGCCGAATCTGCATTCCGATTCTGATCGGTATCATGTTGAAGATGATCAGAAGTCGAAGAAATTCGAGAAGTTGA
BLAST of CmoCh07G002210 vs. TrEMBL
Match: A0A0A0KNE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518080 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.8e-40
Identity = 95/143 (66.43%), Postives = 111/143 (77.62%), Query Frame = 1

Query: 57  SEDRDMINGWPLGLEVMNTRVR-MADS--QRLPPTDPFPTSHIPSRSFSSLSSSELDTMS 116
           S+ +D++NGWPLGL+VMN+ +R MADS    LP   P P   IPS SFSSLSSSELDT+S
Sbjct: 5   SDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLS 64

Query: 117 TASFFQDHSVSLGRLIGIRPGDKTWLYLPTDENACVSVNSAS--LDTRKTKSAE----IS 176
           TASFFQD SVSLGRLIG++P DKTWLY PT+E   VS NSA   +D  KTK+A     IS
Sbjct: 65  TASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANSAGRRVDDSKTKNAGEHEIIS 124

Query: 177 GRICIPILIGIMLKMIRSRRNSR 191
           GRICIPI+IG++LKMIRSRRNSR
Sbjct: 125 GRICIPIVIGVILKMIRSRRNSR 147

BLAST of CmoCh07G002210 vs. TrEMBL
Match: D7TJD4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00210 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.3e-28
Identity = 77/142 (54.23%), Postives = 98/142 (69.01%), Query Frame = 1

Query: 55  MVSEDRDMINGWPLGLEVMNTRVRMADSQRLPPTDPFPTSHIPSRSFSSLSSSELDTMST 114
           MVSE+++M +GWPLGLE+MNTR+R+A+S +    +P  T H+PS SFSS SSS LDT ST
Sbjct: 1   MVSEEQEMPSGWPLGLEIMNTRLRVAESLQASAVEPH-TLHMPSTSFSSFSSSNLDTEST 60

Query: 115 ASFFQDHSVSLGRLIGIRPGDKT-WLYLPT----DENACVSVNSA-SLDTRKTKSAEISG 174
           ASFFQDHSV LGRLIGIR GD +  LY       +E    S   A   D  +  S E+S 
Sbjct: 61  ASFFQDHSVPLGRLIGIRSGDGSGGLYFTNRMRFNERERASARGAHPPDPSRGHSMELSQ 120

Query: 175 RICIPILIGIMLKMIRSRRNSR 191
            ICIP+L+GI++KM RS+ +SR
Sbjct: 121 GICIPLLLGILVKMNRSKSSSR 141

BLAST of CmoCh07G002210 vs. TrEMBL
Match: M5WVM5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012876mg PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.9e-26
Identity = 68/141 (48.23%), Postives = 91/141 (64.54%), Query Frame = 1

Query: 55  MVSEDRDMINGWPLGLEVMNTRVRMADSQRLPPTDPFPTSHIPSRSFSSLSSSELDTMST 114
           M +ED +M +GWPLGLE+MN R+R+ +S         P  HIPS SF+S SSS LDT ST
Sbjct: 1   MATEDHEMPHGWPLGLEIMNMRLRVVESLPAAVVGHRPL-HIPSASFTSFSSSNLDTEST 60

Query: 115 ASFFQDHSVSLGRLIGIRPGDKTWLYLPT----DENACVSVNSASLDTRKTKSAEISGRI 174
           ASFFQDHS+SLGRLIG R GD+  LY P     +E+   S+  +  D       + S RI
Sbjct: 61  ASFFQDHSMSLGRLIGFRTGDRGRLYYPNSICFEEHDRNSIKGSHSDVSTRHQVDTSRRI 120

Query: 175 CIPILIGIMLKMIRSRRNSRS 192
           CIP+++G ++K+ RS+  S+S
Sbjct: 121 CIPLMLGALVKISRSKSKSKS 140

BLAST of CmoCh07G002210 vs. TrEMBL
Match: A0A061GF57_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_029811 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.5e-25
Identity = 65/142 (45.77%), Postives = 97/142 (68.31%), Query Frame = 1

Query: 55  MVSEDRDMINGWPLGLEVMNTRVRMADSQRL--PPTDPFPTSHIPSRSFSSLSSSELDTM 114
           M +++R+M NGWPLGL++M  R+R+ +  +   P  +P+ + H+PS SFSS SSS LDT 
Sbjct: 1   MATQNREMSNGWPLGLQIMTMRLRLQERLQAAAPTVEPY-SLHMPSSSFSSFSSSNLDTE 60

Query: 115 STASFFQDHSVSLGRLIGIRPGDKTWLY----LPTDENACVSVNSASLDTRKTKSAEISG 174
           S+ASFFQD+SVSLGRLIG RP D+  LY    +  +EN  + V  A  D  +  ++++S 
Sbjct: 61  SSASFFQDNSVSLGRLIGFRPRDRGALYFQNTIHAEENNRLPVTGACKDVSRRHNSDMSQ 120

Query: 175 RICIPILIGIMLKMIRSRRNSR 191
            ICIP+++G ++KM R+R  S+
Sbjct: 121 GICIPLILGALVKMSRNRSKSK 141

BLAST of CmoCh07G002210 vs. TrEMBL
Match: I1M071_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G175400 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.3e-25
Identity = 70/142 (49.30%), Postives = 92/142 (64.79%), Query Frame = 1

Query: 55  MVSEDRDMINGWPLGLEVMNTRVRMADSQRLPPTDPFPTSHIPSRSFSSLSSSELDTMST 114
           MVSE+ +M  GWP GL  +N R R A+S    P +P  + HIPS SFSS SSS LDT ST
Sbjct: 1   MVSENDEMPIGWPFGLGFLNMRFRDAESLPAAPVEPH-SMHIPSTSFSSFSSSNLDTEST 60

Query: 115 ASFFQDHSVSLGRLIGIRPGDKTWLYLP-------TDENACVSVNSASLDTRKTKSAEIS 174
           ASFFQD+SVSLG LIG+RPG+K  LY P       T++   ++  S S D  K K  ++S
Sbjct: 61  ASFFQDNSVSLGHLIGLRPGEKGRLYFPNTLRLEETEKKKTLANCSCSDDASKVKEVDMS 120

Query: 175 GRICIPILIGIMLKMIRSRRNS 190
             ICIPIL+  +LK+ + +++S
Sbjct: 121 RGICIPILLEALLKISKCKKSS 141

BLAST of CmoCh07G002210 vs. NCBI nr
Match: gi|659078608|ref|XP_008439814.1| (PREDICTED: uncharacterized protein LOC103484500 [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 6.2e-41
Identity = 97/139 (69.78%), Postives = 113/139 (81.29%), Query Frame = 1

Query: 60  RDMINGWPLGLEVMNTRVR-MADS--QRLPPTDPFPTSHIPSRSFSSLSSSELDTMSTAS 119
           +D++NGWPLGL+VMNT +R MADS   RLP TDP P   IPS SFSSLSSSELDT+STAS
Sbjct: 11  QDLLNGWPLGLQVMNTTLRLMADSGTHRLPSTDPSPDVLIPSFSFSSLSSSELDTLSTAS 70

Query: 120 FFQDHSVSLGRLIGIRPGDKTWLYLPTDENACVSVNSAS-LDTRKTKSA--EISGR-ICI 179
           FFQDHSVSLGRLIG++P DK WLY+PT+E   V+ NSA  +D  KTK+   EISGR ICI
Sbjct: 71  FFQDHSVSLGRLIGLKPADKKWLYIPTEEKKSVTANSAGRVDDSKTKAGEHEISGRIICI 130

Query: 180 PILIGIMLKMIRSRRNSRS 192
           PI+IG++LKMIRSRRNS S
Sbjct: 131 PIVIGVILKMIRSRRNSSS 149

BLAST of CmoCh07G002210 vs. NCBI nr
Match: gi|778720934|ref|XP_011658225.1| (PREDICTED: uncharacterized protein LOC105435964 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 6.8e-40
Identity = 95/143 (66.43%), Postives = 111/143 (77.62%), Query Frame = 1

Query: 57  SEDRDMINGWPLGLEVMNTRVR-MADS--QRLPPTDPFPTSHIPSRSFSSLSSSELDTMS 116
           S+ +D++NGWPLGL+VMN+ +R MADS    LP   P P   IPS SFSSLSSSELDT+S
Sbjct: 5   SDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLS 64

Query: 117 TASFFQDHSVSLGRLIGIRPGDKTWLYLPTDENACVSVNSAS--LDTRKTKSAE----IS 176
           TASFFQD SVSLGRLIG++P DKTWLY PT+E   VS NSA   +D  KTK+A     IS
Sbjct: 65  TASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANSAGRRVDDSKTKNAGEHEIIS 124

Query: 177 GRICIPILIGIMLKMIRSRRNSR 191
           GRICIPI+IG++LKMIRSRRNSR
Sbjct: 125 GRICIPIVIGVILKMIRSRRNSR 147

BLAST of CmoCh07G002210 vs. NCBI nr
Match: gi|225443610|ref|XP_002279326.1| (PREDICTED: uncharacterized protein LOC100241906 [Vitis vinifera])

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-27
Identity = 77/142 (54.23%), Postives = 98/142 (69.01%), Query Frame = 1

Query: 55  MVSEDRDMINGWPLGLEVMNTRVRMADSQRLPPTDPFPTSHIPSRSFSSLSSSELDTMST 114
           MVSE+++M +GWPLGLE+MNTR+R+A+S +    +P  T H+PS SFSS SSS LDT ST
Sbjct: 1   MVSEEQEMPSGWPLGLEIMNTRLRVAESLQASAVEPH-TLHMPSTSFSSFSSSNLDTEST 60

Query: 115 ASFFQDHSVSLGRLIGIRPGDKT-WLYLPT----DENACVSVNSA-SLDTRKTKSAEISG 174
           ASFFQDHSV LGRLIGIR GD +  LY       +E    S   A   D  +  S E+S 
Sbjct: 61  ASFFQDHSVPLGRLIGIRSGDGSGGLYFTNRMRFNERERASARGAHPPDPSRGHSMELSQ 120

Query: 175 RICIPILIGIMLKMIRSRRNSR 191
            ICIP+L+GI++KM RS+ +SR
Sbjct: 121 GICIPLLLGILVKMNRSKSSSR 141

BLAST of CmoCh07G002210 vs. NCBI nr
Match: gi|694309933|ref|XP_009343779.1| (PREDICTED: uncharacterized protein LOC103935670 [Pyrus x bretschneideri])

HSP 1 Score: 127.5 bits (319), Expect = 2.5e-26
Identity = 66/136 (48.53%), Postives = 95/136 (69.85%), Query Frame = 1

Query: 55  MVSEDRDMINGWPLGLEVMNTRVRMADSQRLPPTDPFPTSHIPSRSFSSLSSSELDTMST 114
           MV+ED +M +GWPLGLE+MN R+R+ +S      +   +SH+ S SF+S SSS LDT S+
Sbjct: 1   MVAEDLEMHHGWPLGLEIMNMRLRVVESLPAAVVE-HRSSHVRSASFTSFSSSNLDTESS 60

Query: 115 ASFFQDHSVSLGRLIGIRPGDKTWLYLPT----DENACVSVNSASLDTRKTKSAEISGRI 174
           ASFFQDHS+SLGRLIGIR GD+  LY P     +E+  +S+  +  +  K +  ++S RI
Sbjct: 61  ASFFQDHSMSLGRLIGIRTGDRGRLYFPNSIRFEEHDRISIKGSQSEVSKRRRVDMSRRI 120

Query: 175 CIPILIGIMLKMIRSR 187
           CIP+L+G ++K+ RS+
Sbjct: 121 CIPLLLGALVKISRSK 135

BLAST of CmoCh07G002210 vs. NCBI nr
Match: gi|595876005|ref|XP_007212199.1| (hypothetical protein PRUPE_ppa012876mg [Prunus persica])

HSP 1 Score: 126.3 bits (316), Expect = 5.6e-26
Identity = 68/141 (48.23%), Postives = 91/141 (64.54%), Query Frame = 1

Query: 55  MVSEDRDMINGWPLGLEVMNTRVRMADSQRLPPTDPFPTSHIPSRSFSSLSSSELDTMST 114
           M +ED +M +GWPLGLE+MN R+R+ +S         P  HIPS SF+S SSS LDT ST
Sbjct: 1   MATEDHEMPHGWPLGLEIMNMRLRVVESLPAAVVGHRPL-HIPSASFTSFSSSNLDTEST 60

Query: 115 ASFFQDHSVSLGRLIGIRPGDKTWLYLPT----DENACVSVNSASLDTRKTKSAEISGRI 174
           ASFFQDHS+SLGRLIG R GD+  LY P     +E+   S+  +  D       + S RI
Sbjct: 61  ASFFQDHSMSLGRLIGFRTGDRGRLYYPNSICFEEHDRNSIKGSHSDVSTRHQVDTSRRI 120

Query: 175 CIPILIGIMLKMIRSRRNSRS 192
           CIP+++G ++K+ RS+  S+S
Sbjct: 121 CIPLMLGALVKISRSKSKSKS 140

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KNE6_CUCSA4.8e-4066.43Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518080 PE=4 SV=1[more]
D7TJD4_VITVI9.3e-2854.23Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00210 PE=4 SV=... [more]
M5WVM5_PRUPE3.9e-2648.23Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012876mg PE=4 SV=1[more]
A0A061GF57_THECC2.5e-2545.77Uncharacterized protein OS=Theobroma cacao GN=TCM_029811 PE=4 SV=1[more]
I1M071_SOYBN3.3e-2549.30Uncharacterized protein OS=Glycine max GN=GLYMA_13G175400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659078608|ref|XP_008439814.1|6.2e-4169.78PREDICTED: uncharacterized protein LOC103484500 [Cucumis melo][more]
gi|778720934|ref|XP_011658225.1|6.8e-4066.43PREDICTED: uncharacterized protein LOC105435964 [Cucumis sativus][more]
gi|225443610|ref|XP_002279326.1|1.3e-2754.23PREDICTED: uncharacterized protein LOC100241906 [Vitis vinifera][more]
gi|694309933|ref|XP_009343779.1|2.5e-2648.53PREDICTED: uncharacterized protein LOC103935670 [Pyrus x bretschneideri][more]
gi|595876005|ref|XP_007212199.1|5.6e-2648.23hypothetical protein PRUPE_ppa012876mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G002210.1CmoCh07G002210.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33544FAMILY NOT NAMEDcoord: 56..190
score: 8.9
NoneNo IPR availablePANTHERPTHR33544:SF2SUBFAMILY NOT NAMEDcoord: 56..190
score: 8.9

The following gene(s) are paralogous to this gene:

None