CmoCh07G002210.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAGAGAGAGAGAGAGAGAGAGAGGCATACCCATTGGCATATACGAAGATTATGTGAACTTTGGTACCGAAATCAAGCCTGATTGTGATGTGTGACCGAGAATAAACTAACCCATTTTTCTTCACCAAATGGCTAATCCCTTCTTGAATCTGCAGAAGCCCCTCGTAATTATCACCTCTTCCTTCAGATTCGAATCCCCCAATTCATATAAAACCCTAAACCCCTCTGCAAATCCCCCAATTCATTTCCTACATCTTCCTTTTGCGTTCCGATTTCCAGAGCCGAAACCCATGGTTTCAGAGGTTAACCGACTGAACCACTAACATTGCTTCTTTAGCTTGGCTTTGTGGCTTTGATTTTGATGCTAATTTTGTAGGATCGAGACATGATCAATGGTTGGCCACTGGGACTCGAGGTTATGAACACCAGAGTTCGAATGGCAGACTCACAGAGGTTACCGCCCACGGATCCCTTCCCTACTTCGCACATTCCTTCAAGGAGTTTCTCCTCTTTGTCTTCCTCTGAACTCGACACCATGGTTCGTAAACTTATGATCTGCATTTCTTTTTTCAAATTAGAGTCGATGAACTTTCCATGATTGCAGCCAAACAGACCTCGTAATTAATTTATCTTTGACATTTACCTCTGTTTTGGCTTCTTCTCTTCCTGGTGTTGACAGTCCACGGCTTCGTTCTTCCAAGACCACAGCGTATCTCTCGGCCGGCTCATCGGAATAAGGCCGGGCGACAAGACGTGGTTGTACCTCCCGACGGACGAGAATGCGTGTGTATCGGTAAATTCCGCAAGCTTAGATACGAGGAAAACGAAGAGCGCTGAAATATCAGGCCGAATCTGCATTCCGATTCTGATCGGTATCATGTTGAAGATGATCAGAAGTCGAAGAAATTCGAGAAGTTGAAGAAGGAAACGAGATGAAGTGAAATTGGGCGAACGTAATTACAAATTGCGTCAGTTGTTTTTCTTTGCGAGTTTTGGAACATTGTTGATGGAAGACGTGGTTATAGGAAATCTGGAACTTCGTTGCTTGCTTCTGAATTCAATTTATCTGAAGAATCTGAATCAAAATTGAAAAGCGTTTAAGCTTTCCTTTTCCCGATCACTTTCCTGAGAAACAAACAGAAACGAGATACCCAGATTTAATCCAAAAGAATCTGGATTTAGTGTCAAG GAGAGAGAGAGAGAGAGAGAGAGAGGCATACCCATTGGCATATACGAAGATTATGTGAACTTTGGTACCGAAATCAAGCCTGATTGTGATGTGTGACCGAGAATAAACTAACCCATTTTTCTTCACCAAATGGCTAATCCCTTCTTGAATCTGCAGAAGCCCCTCGTAATTATCACCTCTTCCTTCAGATTCGAATCCCCCAATTCATATAAAACCCTAAACCCCTCTGCAAATCCCCCAATTCATTTCCTACATCTTCCTTTTGCGTTCCGATTTCCAGAGCCGAAACCCATGGTTTCAGAGGATCGAGACATGATCAATGGTTGGCCACTGGGACTCGAGGTTATGAACACCAGAGTTCGAATGGCAGACTCACAGAGGTTACCGCCCACGGATCCCTTCCCTACTTCGCACATTCCTTCAAGGAGTTTCTCCTCTTTGTCTTCCTCTGAACTCGACACCATGTCCACGGCTTCGTTCTTCCAAGACCACAGCGTATCTCTCGGCCGGCTCATCGGAATAAGGCCGGGCGACAAGACGTGGTTGTACCTCCCGACGGACGAGAATGCGTGTGTATCGGTAAATTCCGCAAGCTTAGATACGAGGAAAACGAAGAGCGCTGAAATATCAGGCCGAATCTGCATTCCGATTCTGATCGGTATCATGTTGAAGATGATCAGAAGTCGAAGAAATTCGAGAAGTTGAAGAAGGAAACGAGATGAAGTGAAATTGGGCGAACGTAATTACAAATTGCGTCAGTTGTTTTTCTTTGCGAGTTTTGGAACATTGTTGATGGAAGACGTGGTTATAGGAAATCTGGAACTTCGTTGCTTGCTTCTGAATTCAATTTATCTGAAGAATCTGAATCAAAATTGAAAAGCGTTTAAGCTTTCCTTTTCCCGATCACTTTCCTGAGAAACAAACAGAAACGAGATACCCAGATTTAATCCAAAAGAATCTGGATTTAGTGTCAAG ATGGCTAATCCCTTCTTGAATCTGCAGAAGCCCCTCGTAATTATCACCTCTTCCTTCAGATTCGAATCCCCCAATTCATATAAAACCCTAAACCCCTCTGCAAATCCCCCAATTCATTTCCTACATCTTCCTTTTGCGTTCCGATTTCCAGAGCCGAAACCCATGGTTTCAGAGGATCGAGACATGATCAATGGTTGGCCACTGGGACTCGAGGTTATGAACACCAGAGTTCGAATGGCAGACTCACAGAGGTTACCGCCCACGGATCCCTTCCCTACTTCGCACATTCCTTCAAGGAGTTTCTCCTCTTTGTCTTCCTCTGAACTCGACACCATGTCCACGGCTTCGTTCTTCCAAGACCACAGCGTATCTCTCGGCCGGCTCATCGGAATAAGGCCGGGCGACAAGACGTGGTTGTACCTCCCGACGGACGAGAATGCGTGTGTATCGGTAAATTCCGCAAGCTTAGATACGAGGAAAACGAAGAGCGCTGAAATATCAGGCCGAATCTGCATTCCGATTCTGATCGGTATCATGTTGAAGATGATCAGAAGTCGAAGAAATTCGAGAAGTTGA
BLAST of CmoCh07G002210.1 vs. TrEMBL
Match: A0A0A0KNE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518080 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 4.8e-40 Identity = 95/143 (66.43%), Postives = 111/143 (77.62%), Query Frame = 1
BLAST of CmoCh07G002210.1 vs. TrEMBL
Match: D7TJD4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00210 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 9.3e-28 Identity = 77/142 (54.23%), Postives = 98/142 (69.01%), Query Frame = 1
BLAST of CmoCh07G002210.1 vs. TrEMBL
Match: M5WVM5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012876mg PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.9e-26 Identity = 68/141 (48.23%), Postives = 91/141 (64.54%), Query Frame = 1
BLAST of CmoCh07G002210.1 vs. TrEMBL
Match: A0A061GF57_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_029811 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 2.5e-25 Identity = 65/142 (45.77%), Postives = 97/142 (68.31%), Query Frame = 1
BLAST of CmoCh07G002210.1 vs. TrEMBL
Match: I1M071_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G175400 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.3e-25 Identity = 70/142 (49.30%), Postives = 92/142 (64.79%), Query Frame = 1
BLAST of CmoCh07G002210.1 vs. NCBI nr
Match: gi|659078608|ref|XP_008439814.1| (PREDICTED: uncharacterized protein LOC103484500 [Cucumis melo]) HSP 1 Score: 176.0 bits (445), Expect = 6.2e-41 Identity = 97/139 (69.78%), Postives = 113/139 (81.29%), Query Frame = 1
BLAST of CmoCh07G002210.1 vs. NCBI nr
Match: gi|778720934|ref|XP_011658225.1| (PREDICTED: uncharacterized protein LOC105435964 [Cucumis sativus]) HSP 1 Score: 172.6 bits (436), Expect = 6.8e-40 Identity = 95/143 (66.43%), Postives = 111/143 (77.62%), Query Frame = 1
BLAST of CmoCh07G002210.1 vs. NCBI nr
Match: gi|225443610|ref|XP_002279326.1| (PREDICTED: uncharacterized protein LOC100241906 [Vitis vinifera]) HSP 1 Score: 131.7 bits (330), Expect = 1.3e-27 Identity = 77/142 (54.23%), Postives = 98/142 (69.01%), Query Frame = 1
BLAST of CmoCh07G002210.1 vs. NCBI nr
Match: gi|694309933|ref|XP_009343779.1| (PREDICTED: uncharacterized protein LOC103935670 [Pyrus x bretschneideri]) HSP 1 Score: 127.5 bits (319), Expect = 2.5e-26 Identity = 66/136 (48.53%), Postives = 95/136 (69.85%), Query Frame = 1
BLAST of CmoCh07G002210.1 vs. NCBI nr
Match: gi|595876005|ref|XP_007212199.1| (hypothetical protein PRUPE_ppa012876mg [Prunus persica]) HSP 1 Score: 126.3 bits (316), Expect = 5.6e-26 Identity = 68/141 (48.23%), Postives = 91/141 (64.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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