CmoCh07G001090 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGACGCAACTTGAGACCCACAGAGCAGATGCCGAGATCTACCATGGCGACGCTATCTGCAAGCAAAAATCTCAAGAACTTCTCGATCAATTCTTTCTTCCCCGAGGACTTCTCCCCTTAAACGACATCCTCGAGGTCGGCTACAATCGGACCTCTGGTTTCATCTGGCTCAAACAGCAGAAGAAAAAGGAGCATCGATTCGTCGCCATCGGACGCACTGTCTTGTACGACACCGAGGTTACCGCCTTTATCGAGGAGCGCCGCCTCCGCCGCCTCACCGGAGTTAAAAGCAAGGAGTTCTTCTTTTCGATCACCGTTTCCGATATTTATATTGATGTACACAACACGAGTAGGATCACGTTTGGTACTCTGACTGGAATTTCAAAGTCTTTCCCGGTCTCTGCGTTTCTGATTGAAGAAGAAACTGATCAGAAGAAGTAA ATGTCGACGCAACTTGAGACCCACAGAGCAGATGCCGAGATCTACCATGGCGACGCTATCTGCAAGCAAAAATCTCAAGAACTTCTCGATCAATTCTTTCTTCCCCGAGGACTTCTCCCCTTAAACGACATCCTCGAGGTCGGCTACAATCGGACCTCTGGTTTCATCTGGCTCAAACAGCAGAAGAAAAAGGAGCATCGATTCGTCGCCATCGGACGCACTGTCTTGTACGACACCGAGGTTACCGCCTTTATCGAGGAGCGCCGCCTCCGCCGCCTCACCGGAGTTAAAAGCAAGGAGTTCTTCTTTTCGATCACCGTTTCCGATATTTATATTGATGTACACAACACGAGTAGGATCACGTTTGGTACTCTGACTGGAATTTCAAAGTCTTTCCCGGTCTCTGCGTTTCTGATTGAAGAAGAAACTGATCAGAAGAAGTAA ATGTCGACGCAACTTGAGACCCACAGAGCAGATGCCGAGATCTACCATGGCGACGCTATCTGCAAGCAAAAATCTCAAGAACTTCTCGATCAATTCTTTCTTCCCCGAGGACTTCTCCCCTTAAACGACATCCTCGAGGTCGGCTACAATCGGACCTCTGGTTTCATCTGGCTCAAACAGCAGAAGAAAAAGGAGCATCGATTCGTCGCCATCGGACGCACTGTCTTGTACGACACCGAGGTTACCGCCTTTATCGAGGAGCGCCGCCTCCGCCGCCTCACCGGAGTTAAAAGCAAGGAGTTCTTCTTTTCGATCACCGTTTCCGATATTTATATTGATGTACACAACACGAGTAGGATCACGTTTGGTACTCTGACTGGAATTTCAAAGTCTTTCCCGGTCTCTGCGTTTCTGATTGAAGAAGAAACTGATCAGAAGAAGTAA
BLAST of CmoCh07G001090 vs. TrEMBL
Match: A0A0A0KI40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G523360 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 7.1e-68 Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 1
BLAST of CmoCh07G001090 vs. TrEMBL
Match: M5WJQ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020725mg PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 8.2e-48 Identity = 93/140 (66.43%), Postives = 116/140 (82.86%), Query Frame = 1
BLAST of CmoCh07G001090 vs. TrEMBL
Match: B9H2B8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s06350g PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 3.1e-47 Identity = 90/141 (63.83%), Postives = 117/141 (82.98%), Query Frame = 1
BLAST of CmoCh07G001090 vs. TrEMBL
Match: V7BS98_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G164700g PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 9.0e-47 Identity = 91/146 (62.33%), Postives = 120/146 (82.19%), Query Frame = 1
BLAST of CmoCh07G001090 vs. TrEMBL
Match: A0A0S3S382_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G065500 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.2e-46 Identity = 89/144 (61.81%), Postives = 119/144 (82.64%), Query Frame = 1
BLAST of CmoCh07G001090 vs. TAIR10
Match: AT5G46230.1 (AT5G46230.1 Protein of unknown function, DUF538) HSP 1 Score: 146.4 bits (368), Expect = 1.4e-35 Identity = 64/133 (48.12%), Postives = 103/133 (77.44%), Query Frame = 1
BLAST of CmoCh07G001090 vs. TAIR10
Match: AT1G09310.1 (AT1G09310.1 Protein of unknown function, DUF538) HSP 1 Score: 139.0 bits (349), Expect = 2.3e-33 Identity = 68/142 (47.89%), Postives = 98/142 (69.01%), Query Frame = 1
BLAST of CmoCh07G001090 vs. TAIR10
Match: AT1G56580.1 (AT1G56580.1 Protein of unknown function, DUF538) HSP 1 Score: 135.6 bits (340), Expect = 2.5e-32 Identity = 65/134 (48.51%), Postives = 97/134 (72.39%), Query Frame = 1
BLAST of CmoCh07G001090 vs. TAIR10
Match: AT1G30020.1 (AT1G30020.1 Protein of unknown function, DUF538) HSP 1 Score: 126.7 bits (317), Expect = 1.2e-29 Identity = 58/102 (56.86%), Postives = 75/102 (73.53%), Query Frame = 1
BLAST of CmoCh07G001090 vs. TAIR10
Match: AT4G24130.1 (AT4G24130.1 Protein of unknown function, DUF538) HSP 1 Score: 109.8 bits (273), Expect = 1.5e-24 Identity = 51/134 (38.06%), Postives = 86/134 (64.18%), Query Frame = 1
BLAST of CmoCh07G001090 vs. NCBI nr
Match: gi|449434262|ref|XP_004134915.1| (PREDICTED: uncharacterized protein LOC101215500 [Cucumis sativus]) HSP 1 Score: 264.6 bits (675), Expect = 1.0e-67 Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 1
BLAST of CmoCh07G001090 vs. NCBI nr
Match: gi|700194191|gb|KGN49395.1| (hypothetical protein Csa_6G523360 [Cucumis sativus]) HSP 1 Score: 264.6 bits (675), Expect = 1.0e-67 Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 1
BLAST of CmoCh07G001090 vs. NCBI nr
Match: gi|659078273|ref|XP_008439638.1| (PREDICTED: uncharacterized protein LOC103484371 [Cucumis melo]) HSP 1 Score: 263.8 bits (673), Expect = 1.7e-67 Identity = 132/147 (89.80%), Postives = 138/147 (93.88%), Query Frame = 1
BLAST of CmoCh07G001090 vs. NCBI nr
Match: gi|595883639|ref|XP_007212828.1| (hypothetical protein PRUPE_ppa020725mg [Prunus persica]) HSP 1 Score: 198.0 bits (502), Expect = 1.2e-47 Identity = 93/140 (66.43%), Postives = 116/140 (82.86%), Query Frame = 1
BLAST of CmoCh07G001090 vs. NCBI nr
Match: gi|645238019|ref|XP_008225480.1| (PREDICTED: uncharacterized protein LOC103325123 [Prunus mume]) HSP 1 Score: 196.4 bits (498), Expect = 3.4e-47 Identity = 92/140 (65.71%), Postives = 116/140 (82.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |