ClCG01G024600 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGACCCAACTTGCGACTCACAGAGCAGACGCCCAGATCTACAACGGCGACGCTCTCTGCAAGCAAAAATCTCAAGAGCTTCTCGATCAATTCTTTCTTCCCCGAGGCCTTCTCCCCTTAAACGACATCCTTGAGGTCGGCTACAATCGGACCTCCGGTTTCATTTGGCTCAAGCAGCAGAAGAAAAAGGAGCACCGCTTCGCCGCCATCGGGCGCACTGTCTTGTACGACACTGAGGTCACCGCCTTCATCGAGGAGCGCCGCCTCCGCCGTCTCACTGGAGTTAAGAGCAAGGAGTTCTTTCTTTCGATTACCGTTTCCGATATTTATATTGATGAACAGAACACGAGTAGGATCACGTTCGGTACTCTGACTGGAATTGCCAAGTCCTTCCCCGTCTCTGCGTTTCTGATTGAAGAAGAAGCTGATCGGATGAAGTGA ATGACGACCCAACTTGCGACTCACAGAGCAGACGCCCAGATCTACAACGGCGACGCTCTCTGCAAGCAAAAATCTCAAGAGCTTCTCGATCAATTCTTTCTTCCCCGAGGCCTTCTCCCCTTAAACGACATCCTTGAGGTCGGCTACAATCGGACCTCCGGTTTCATTTGGCTCAAGCAGCAGAAGAAAAAGGAGCACCGCTTCGCCGCCATCGGGCGCACTGTCTTGTACGACACTGAGGTCACCGCCTTCATCGAGGAGCGCCGCCTCCGCCGTCTCACTGGAGTTAAGAGCAAGGAGTTCTTTCTTTCGATTACCGTTTCCGATATTTATATTGATGAACAGAACACGAGTAGGATCACGTTCGGTACTCTGACTGGAATTGCCAAGTCCTTCCCCGTCTCTGCGTTTCTGATTGAAGAAGAAGCTGATCGGATGAAGTGA ATGACGACCCAACTTGCGACTCACAGAGCAGACGCCCAGATCTACAACGGCGACGCTCTCTGCAAGCAAAAATCTCAAGAGCTTCTCGATCAATTCTTTCTTCCCCGAGGCCTTCTCCCCTTAAACGACATCCTTGAGGTCGGCTACAATCGGACCTCCGGTTTCATTTGGCTCAAGCAGCAGAAGAAAAAGGAGCACCGCTTCGCCGCCATCGGGCGCACTGTCTTGTACGACACTGAGGTCACCGCCTTCATCGAGGAGCGCCGCCTCCGCCGTCTCACTGGAGTTAAGAGCAAGGAGTTCTTTCTTTCGATTACCGTTTCCGATATTTATATTGATGAACAGAACACGAGTAGGATCACGTTCGGTACTCTGACTGGAATTGCCAAGTCCTTCCCCGTCTCTGCGTTTCTGATTGAAGAAGAAGCTGATCGGATGAAGTGA MTTQLATHRADAQIYNGDALCKQKSQELLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQQKKKEHRFAAIGRTVLYDTEVTAFIEERRLRRLTGVKSKEFFLSITVSDIYIDEQNTSRITFGTLTGIAKSFPVSAFLIEEEADRMK
BLAST of ClCG01G024600 vs. TrEMBL
Match: A0A0A0KI40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G523360 PE=4 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 1.4e-68 Identity = 132/147 (89.80%), Postives = 140/147 (95.24%), Query Frame = 1
BLAST of ClCG01G024600 vs. TrEMBL
Match: B9H2B8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s06350g PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 2.4e-47 Identity = 92/143 (64.34%), Postives = 121/143 (84.62%), Query Frame = 1
BLAST of ClCG01G024600 vs. TrEMBL
Match: A0A0L9VF08_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g224200 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 2.4e-47 Identity = 90/141 (63.83%), Postives = 121/141 (85.82%), Query Frame = 1
BLAST of ClCG01G024600 vs. TrEMBL
Match: A0A0S3S382_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G065500 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 2.4e-47 Identity = 90/141 (63.83%), Postives = 121/141 (85.82%), Query Frame = 1
BLAST of ClCG01G024600 vs. TrEMBL
Match: A0A067KPA6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04615 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 9.0e-47 Identity = 91/147 (61.90%), Postives = 120/147 (81.63%), Query Frame = 1
BLAST of ClCG01G024600 vs. TAIR10
Match: AT5G46230.1 (AT5G46230.1 Protein of unknown function, DUF538) HSP 1 Score: 148.7 bits (374), Expect = 2.9e-36 Identity = 64/133 (48.12%), Postives = 103/133 (77.44%), Query Frame = 1
BLAST of ClCG01G024600 vs. TAIR10
Match: AT1G09310.1 (AT1G09310.1 Protein of unknown function, DUF538) HSP 1 Score: 138.3 bits (347), Expect = 3.9e-33 Identity = 64/134 (47.76%), Postives = 97/134 (72.39%), Query Frame = 1
BLAST of ClCG01G024600 vs. TAIR10
Match: AT1G56580.1 (AT1G56580.1 Protein of unknown function, DUF538) HSP 1 Score: 134.8 bits (338), Expect = 4.3e-32 Identity = 62/134 (46.27%), Postives = 98/134 (73.13%), Query Frame = 1
BLAST of ClCG01G024600 vs. TAIR10
Match: AT1G30020.1 (AT1G30020.1 Protein of unknown function, DUF538) HSP 1 Score: 127.1 bits (318), Expect = 8.9e-30 Identity = 58/102 (56.86%), Postives = 76/102 (74.51%), Query Frame = 1
BLAST of ClCG01G024600 vs. TAIR10
Match: AT4G24130.1 (AT4G24130.1 Protein of unknown function, DUF538) HSP 1 Score: 110.5 bits (275), Expect = 8.7e-25 Identity = 52/134 (38.81%), Postives = 85/134 (63.43%), Query Frame = 1
BLAST of ClCG01G024600 vs. NCBI nr
Match: gi|449434262|ref|XP_004134915.1| (PREDICTED: uncharacterized protein LOC101215500 [Cucumis sativus]) HSP 1 Score: 266.9 bits (681), Expect = 2.1e-68 Identity = 132/147 (89.80%), Postives = 140/147 (95.24%), Query Frame = 1
BLAST of ClCG01G024600 vs. NCBI nr
Match: gi|700194191|gb|KGN49395.1| (hypothetical protein Csa_6G523360 [Cucumis sativus]) HSP 1 Score: 266.9 bits (681), Expect = 2.1e-68 Identity = 132/147 (89.80%), Postives = 140/147 (95.24%), Query Frame = 1
BLAST of ClCG01G024600 vs. NCBI nr
Match: gi|659078273|ref|XP_008439638.1| (PREDICTED: uncharacterized protein LOC103484371 [Cucumis melo]) HSP 1 Score: 266.9 bits (681), Expect = 2.1e-68 Identity = 134/147 (91.16%), Postives = 138/147 (93.88%), Query Frame = 1
BLAST of ClCG01G024600 vs. NCBI nr
Match: gi|951039567|ref|XP_014517441.1| (PREDICTED: uncharacterized protein LOC106774929 [Vigna radiata var. radiata]) HSP 1 Score: 199.5 bits (506), Expect = 4.0e-48 Identity = 92/141 (65.25%), Postives = 121/141 (85.82%), Query Frame = 1
BLAST of ClCG01G024600 vs. NCBI nr
Match: gi|920712334|gb|KOM53583.1| (hypothetical protein LR48_Vigan09g224200 [Vigna angularis]) HSP 1 Score: 196.4 bits (498), Expect = 3.4e-47 Identity = 90/141 (63.83%), Postives = 121/141 (85.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |