CmoCh07G001070 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G001070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	BnaC04g10710D protein
Location	Cmo_Chr07 : 614470 .. 615700 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATACAAAATGGCATATTTCTCATTAGCATTTGCAAGAGACGTTTTTGTGATGATGAAAAACTTCCTCAAGAGTTTTAAGATCCAAACCAAATATGGAACAACAGCAGGAGCCACAGCATCGAGTGTCATAATCTCCGGCATTGGTCTCATGTTGATTTATGCCTATACTCAGAGGAAAAAGGAGAAAAAAACCCAGCGTGTTTTCACAAGATCAATGTCCATAGGAGCTCTACATGGTGGCAGAATAGCCATGAAAAGAATGCTTCAATACCATAAAATACGAGCAAACCAAGAAATTCAACATGATTATTTGGAGAAGTTAGAGAACATGACGAACACAGACACTCCTGATTTCCCACATATTCAGGTGAAGCATTTAACTTTTACTATCAAACAAGTTGTGTGGATGCTTATATTGATTGTTTTAATGTGCAAAAGGACGTTCTGGCAAAGATGGAAATGATAGGACAAGAAGACAAAGCTATTGAGATATTAAAAAAAGCAGTAAAAGAAGCCAAGGAGAAATCACTGTCATACCATGAATATGAATATCAGATGCTTCTTGTAGAAGCGCTCATTTACAAGGTGTTTCTTACTACAAACTTGTTTCTTAATCGCTCACATTTGATCCAAAAAAATGTGAATCTCAGCCTCCAAATTTGTTTTTTTTCTATGCATTTCTAGGGAGATATTGAGGAGGCAGCAAAGGCTGAATGCTTGAATCACGATGAGCCTTCAGATGTTCGACGATTATTGTATAAGGTACATAATTGTTCATATATTTCTTGTAGAAAAAGGGTTAAAAACCTTATATTTGTCTGTGTGGCATTTCTTCAAACACTTGGCAGACAATAATTGAACTGCTGCTGAATAACCCCCAAAAGGCAGAAGAAGAATGGGAGAAGTTTAGGGAAATGAGAGAACAATTCTTCTTACCACCTGACATTAAAGACTCTGGTTTTTACAAGCTCGTCAACCATTTCGAGGATTTTAAACGAGTCGTCGACCTGCTCAAACAAGACATTGATCAAAAGAAGAAAACAAAATAAAAAAGCAAACAAGCCCCCTCTAACTTTTACTGCAATTGTGTGAATAATTTAGGAAACTCCAAATGAAAAGAAAAATAGTGATGAAATAAAATGGAAGGACATTTGAATGCCAACATAATCGATACTTAAATAGAGATATAATGTTTAAATCTTAAATATTCATTTAATTTTCGATTTAAT

mRNA sequence

AGATACAAAATGGCATATTTCTCATTAGCATTTGCAAGAGACGTTTTTGTGATGATGAAAAACTTCCTCAAGAGTTTTAAGATCCAAACCAAATATGGAACAACAGCAGGAGCCACAGCATCGAGTGTCATAATCTCCGGCATTGGTCTCATGTTGATTTATGCCTATACTCAGAGGAAAAAGGAGAAAAAAACCCAGCGTGTTTTCACAAGATCAATGTCCATAGGAGCTCTACATGGTGGCAGAATAGCCATGAAAAGAATGCTTCAATACCATAAAATACGAGCAAACCAAGAAATTCAACATGATTATTTGGAGAAGTTAGAGAACATGACGAACACAGACACTCCTGATTTCCCACATATTCAGGACGTTCTGGCAAAGATGGAAATGATAGGACAAGAAGACAAAGCTATTGAGATATTAAAAAAAGCAGTAAAAGAAGCCAAGGAGAAATCACTGTCATACCATGAATATGAATATCAGATGCTTCTTGTAGAAGCGCTCATTTACAAGGTGTTTCTTACTACAAACTTGTTTCTTAATCGCTCACATTTGATCCAAAAAAATGGAGATATTGAGGAGGCAGCAAAGGCTGAATGCTTGAATCACGATGAGCCTTCAGATGTTCGACGATTATTGTATAAGACAATAATTGAACTGCTGCTGAATAACCCCCAAAAGGCAGAAGAAGAATGGGAGAAGTTTAGGGAAATGAGAGAACAATTCTTCTTACCACCTGACATTAAAGACTCTGGTTTTTACAAGCTCGTCAACCATTTCGAGGATTTTAAACGAGTCGTCGACCTGCTCAAACAAGACATTGATCAAAAGAAGAAAACAAAATAAAAAAGCAAACAAGCCCCCTCTAACTTTTACTGCAATTGTGTGAATAATTTAGGAAACTCCAAATGAAAAGAAAAATAGTGATGAAATAAAATGGAAGGACATTTGAATGCCAACATAATCGATACTTAAATAGAGATATAATGTTTAAATCTTAAATATTCATTTAATTTTCGATTTAAT

Coding sequence (CDS)

ATGGCATATTTCTCATTAGCATTTGCAAGAGACGTTTTTGTGATGATGAAAAACTTCCTCAAGAGTTTTAAGATCCAAACCAAATATGGAACAACAGCAGGAGCCACAGCATCGAGTGTCATAATCTCCGGCATTGGTCTCATGTTGATTTATGCCTATACTCAGAGGAAAAAGGAGAAAAAAACCCAGCGTGTTTTCACAAGATCAATGTCCATAGGAGCTCTACATGGTGGCAGAATAGCCATGAAAAGAATGCTTCAATACCATAAAATACGAGCAAACCAAGAAATTCAACATGATTATTTGGAGAAGTTAGAGAACATGACGAACACAGACACTCCTGATTTCCCACATATTCAGGACGTTCTGGCAAAGATGGAAATGATAGGACAAGAAGACAAAGCTATTGAGATATTAAAAAAAGCAGTAAAAGAAGCCAAGGAGAAATCACTGTCATACCATGAATATGAATATCAGATGCTTCTTGTAGAAGCGCTCATTTACAAGGTGTTTCTTACTACAAACTTGTTTCTTAATCGCTCACATTTGATCCAAAAAAATGGAGATATTGAGGAGGCAGCAAAGGCTGAATGCTTGAATCACGATGAGCCTTCAGATGTTCGACGATTATTGTATAAGACAATAATTGAACTGCTGCTGAATAACCCCCAAAAGGCAGAAGAAGAATGGGAGAAGTTTAGGGAAATGAGAGAACAATTCTTCTTACCACCTGACATTAAAGACTCTGGTTTTTACAAGCTCGTCAACCATTTCGAGGATTTTAAACGAGTCGTCGACCTGCTCAAACAAGACATTGATCAAAAGAAGAAAACAAAATAA

Homology

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BLAST of CmoCh07G001070 vs. TrEMBL
Match: A0A0A0KLZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G523380 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.9e-69
Identity = 146/285 (51.23%), Postives = 197/285 (69.12%), Query Frame = 1


Query: 1   MAYFSLAFARDVFVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60
           M++FS     D F  + NF + F +QTKYG  AGATAS+ I+SG+GL+L+Y  T+  K+K
Sbjct: 1   MSHFSFDSVEDFFQALNNFYQKFNVQTKYGPRAGATASTFIVSGVGLVLVYFVTRILKKK 60

Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMTNTDT------P 120
            +QRVFTRS+SIGALHGG+IAMKR+LQ+ K+RAN E +  +++KL++    DT      P
Sbjct: 61  NSQRVFTRSISIGALHGGKIAMKRLLQFQKMRANPENKDKFMKKLDSRIKLDTKIESEHP 120

Query: 121 DFPHIQDVLAKMEMIGQEDKAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKVFLTT 180
           +F  IQ+++ K+EM+GQEDKAIE LK A +EAK+KSL  +E+EYQMLLVE  IYK     
Sbjct: 121 NFTKIQNIVTKLEMLGQEDKAIEKLKNAAEEAKKKSLPLYEHEYQMLLVELYIYK----- 180

Query: 181 NLFLNRSHLIQKNGDIEEAAKAECLNHDEPSDVRRLLYKTIIELLLNNPQKAEEEWEKFR 240
                        GD+ +A +  CL +D  SDVRR LYK II++L N  Q+A +EWE+FR
Sbjct: 181 -------------GDLVKAEELPCLKNDATSDVRRPLYKAIIKVLQNETQEAIKEWEEFR 240

Query: 241 EMREQFFLPPDIKDSGFYKLVNHFEDFKRVVDLLKQDIDQKKKTK 280
           EMR  F LPPD+KDS FY L+  F+ FKRVV +L++DI +K + K
Sbjct: 241 EMRSAFLLPPDVKDSHFYALLADFDSFKRVVQVLREDIFKKPRAK 267

[Close]

BLAST of CmoCh07G001070 vs. TrEMBL
Match: A0A067L1I8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04617 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.0e-35
Identity = 98/264 (37.12%), Postives = 153/264 (57.95%), Query Frame = 1


Query: 14  VMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEKKTQRVFTRSMSIG 73
           V+ + F  S    T     A    S VII+   +   +A     K K+ ++VF RS+S+G
Sbjct: 10  VLEREFFYSIGDSTMVRAVAAIATSIVIIASTYIACRFAKRACDKGKRKEKVFKRSVSVG 69

Query: 74  ALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMTNTDTPDFPHIQDVLAKMEMIGQED 133
           ALHGG++AM+R++ Y   RA+    +    +L+ +   + PDF  +Q V+AK+EM G+E 
Sbjct: 70  ALHGGKLAMERLIHYQHARADAASLNAAESELKALLLEEKPDFNKLQTVVAKLEMSGKEA 129

Query: 134 KAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKVFLTTNLFLNRSHLIQKNGDIEEA 193
           +A+EIL+ AV++AK+ + S+  YE +MLLVE LIYK                  GD ++A
Sbjct: 130 EAVEILEGAVQKAKKGNKSHEAYEIEMLLVEMLIYK------------------GDYKKA 189

Query: 194 AKAECL-NHDEPSDVRRLLYKTIIELLLNNP-QKAEEEWEKFREMREQFFL---PPDIKD 253
              +CL +H+E SD RR LYK II ++L+ P ++A + WE+F E+R  F +   PP   D
Sbjct: 190 LNCDCLSDHEEISDARRPLYKAIIYIMLDYPKEEASKNWEEFTEVRTHFQIFQSPPCTVD 249

Query: 254 SGFYKLVNHFEDFKRVVDLLKQDI 273
             F K + +F +F ++V +LK+DI
Sbjct: 250 EQFQKDITNFNEFDKIVKMLKKDI 255

[Close]

BLAST of CmoCh07G001070 vs. TrEMBL
Match: B9H2B7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s06360g PE=4 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34
Identity = 100/278 (35.97%), Postives = 161/278 (57.91%), Query Frame = 1


Query: 1   MAYFSLAFARDVFVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQR---K 60
           M  F+ +  R+V   ++NF  S  ++ KYG  A ATA+ +  S   + + +AY +R   K
Sbjct: 1   MPVFNFSLKRNVH--LENFFNSITVRNKYGAMA-ATATVIFAS---VYIGWAYAKRSCKK 60

Query: 61  KEKKTQRVFTRSMSIGALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMTNTDTPDFP 120
           ++KK   VFTRSMS+G LHGG++A+ R++ YH+ RA++        +L+++   + PDF 
Sbjct: 61  QKKKVHAVFTRSMSVGVLHGGKLALDRVIDYHRARADEASLKSAENELQDLLIEEHPDFV 120

Query: 121 HIQDVLAKMEMIGQEDKAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKVFLTTNLF 180
            +Q  +A++EM G+E  A+ IL+  +K A+++  S+  YE +MLLVE  IY+        
Sbjct: 121 KLQSTVARLEMSGKEAVAVGILETQLKSARKEGKSHVAYEIEMLLVEMHIYQ-------- 180

Query: 181 LNRSHLIQKNGDIEEAAKAECLNHDEPSDVRRLLYKTIIELLLNNPQK-AEEEWEKFREM 240
                     G+ ++A   ECL+H+E SD RR LYK II ++L +P K A   WEKF ++
Sbjct: 181 ----------GEFKKALACECLSHEEISDARRPLYKAIIYIMLEDPGKEAMNCWEKFIDI 240

Query: 241 REQFFLPPDIKDSGFYKLVNHFEDFKRVVDLLKQDIDQ 275
           R + F  P    S   + V +F +F++ V LL+ DI +
Sbjct: 241 RIR-FESPSSHQSQLNEAVTNFNEFEKAVKLLRNDIQE 253

[Close]

BLAST of CmoCh07G001070 vs. TrEMBL
Match: V4UFI1_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10017838mg PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.3e-33
Identity = 81/211 (38.39%), Postives = 129/211 (61.14%), Query Frame = 1


Query: 69  SMSIGALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMTNTDTPDFPHIQDVLAKMEM 128
           SMS+G LHGG++A++R++ YH  RA++        +L+++     PDF  +Q  +AK+EM
Sbjct: 1   SMSVGVLHGGKLALERLIDYHHARADETSLAAAEIELKDLLQEAHPDFKKLQRTVAKLEM 60

Query: 129 IGQEDKAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKVFLTTNLFLNRSHLIQKNG 188
            G+E +A+ IL+KA+++A+ ++  +  YE QML  E LIYK                  G
Sbjct: 61  SGKEAEAVTILEKALEKAQNENKQHEAYEIQMLREEMLIYK------------------G 120

Query: 189 DIEEAAKAECLNHDEPSDVRRLLYKTIIELLLNNPQKAEEEWEKFREMREQFFLPPDIKD 248
           D E+A   +CL+ ++ SD RR LYK II ++L  P++A   WE+F EM+  F  PPD +D
Sbjct: 121 DFEKALHCKCLDEEDISDARRPLYKAIINVILEQPKEAFSNWEQFNEMQSNFLWPPDQQD 180

Query: 249 SGFYKLVNHFEDFKRVVDLLKQDIDQKKKTK 280
           +  Y++++ F+ F  VV+LLK+DI +  K K
Sbjct: 181 AQLYEVIDDFDKFVNVVNLLKRDIQETSKRK 193

[Close]

BLAST of CmoCh07G001070 vs. TrEMBL
Match: M5X416_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016111mg PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.2e-33
Identity = 86/241 (35.68%), Postives = 139/241 (57.68%), Query Frame = 1


Query: 38  SSVIISGIGLMLIYAYTQRKKEKKTQRV--FTRSMSIGALHGGRIAMKRMLQYHKIRANQ 97
           ++V+ + I ++  Y    RK  K+  +    TRSMSI  LHGG++A++R+ +YH+ RA++
Sbjct: 2   ATVVFASIYVVGAYISRARKMSKEEHQGPRLTRSMSIAVLHGGQLALQRLFEYHEARADK 61

Query: 98  EIQHDYLEKLENMTNTDTPDFPHIQDVLAKMEMIGQEDKAIEILKKAVKEAKEKSLSYHE 157
                   +L+       PD+  +Q V+ K+EM G+E +A+EILK A  +A+ +  ++  
Sbjct: 62  SAVEIAECELKTHLAEQHPDYKKLQSVIGKLEMSGKEAQAVEILKNATAKARNEGRNHEA 121

Query: 158 YEYQMLLVEALIYKVFLTTNLFLNRSHLIQKNGDIEEAAKAECLNHDEPSDVRRLLYKTI 217
           YEY+MLLVE LIYK                  GD +EA   ECL H E SD RR L+K I
Sbjct: 122 YEYEMLLVEMLIYK------------------GDFKEALGRECLRHAEISDARRPLFKAI 181

Query: 218 IELLLNNPQKAEEEWEKFREMREQFFLPPDIKDS----GFYKLVNHFEDFKRVVDLLKQD 273
           + ++  N  +  + W +F +++E+F   P +K+S      +KL  +F +F++VVD+LK+D
Sbjct: 182 VHIIEGNKNEGTKYWREFNDLKEEFHCTPCMKESMEECQLHKLSTNFNEFEKVVDILKKD 224

[Close]

BLAST of CmoCh07G001070 vs. TAIR10
Match: AT2G34530.1 (AT2G34530.1 unknown protein)

HSP 1 Score: 118.2 bits (295), Expect = 7.9e-27
Identity = 73/220 (33.18%), Postives = 126/220 (57.27%), Query Frame = 1


Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMTNTDTPDFPHIQ 120
           + +R  ++S+S+GA+ GG++A++R+L  H  R +     +   + E + + + PDF  +Q
Sbjct: 69  RDERTLSKSVSMGAIRGGKLALQRLLDLHSYRGDTSSLANAELEFEALLSKEKPDFGLLQ 128

Query: 121 DVLAKMEMIGQEDKAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKVFLTTNLFLNR 180
             + KMEM G+E K  E+LKKA+++A+++   +  YE +MLLVE LIY            
Sbjct: 129 RDIVKMEMSGKEAKGAELLKKALEKARKEGKGHEAYEIEMLLVEMLIYL----------- 188

Query: 181 SHLIQKNGDIEEAAKAECLNHDEPSDVRRLLYKTIIELLLNNPQK-AEEEWEKFREMREQ 240
                  G++EEA+K +CL  +  +D RR LY+TII  L  +P K  EE + +FRE++  
Sbjct: 189 -------GNMEEASKCKCLEDEVITDARRPLYQTIIHYLQGHPMKQVEETFNRFREIQIG 248

Query: 241 FFLPPDIKDSGFYKLVNHFEDFKRVVDLLKQDIDQKKKTK 280
              P   ++    ++   F++FK+V++ LK +I+   K K
Sbjct: 249 LQWPGSSEECEIDQVT--FDEFKKVMESLKHEIEDGNKRK 268

[Close]

BLAST of CmoCh07G001070 vs. NCBI nr
Match: gi|778721382|ref|XP_004134647.2| (PREDICTED: uncharacterized protein LOC101211314 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 2.7e-69
Identity = 146/285 (51.23%), Postives = 197/285 (69.12%), Query Frame = 1


Query: 1   MAYFSLAFARDVFVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60
           M++FS     D F  + NF + F +QTKYG  AGATAS+ I+SG+GL+L+Y  T+  K+K
Sbjct: 1   MSHFSFDSVEDFFQALNNFYQKFNVQTKYGPRAGATASTFIVSGVGLVLVYFVTRILKKK 60

Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMTNTDT------P 120
            +QRVFTRS+SIGALHGG+IAMKR+LQ+ K+RAN E +  +++KL++    DT      P
Sbjct: 61  NSQRVFTRSISIGALHGGKIAMKRLLQFQKMRANPENKDKFMKKLDSRIKLDTKIESEHP 120

Query: 121 DFPHIQDVLAKMEMIGQEDKAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKVFLTT 180
           +F  IQ+++ K+EM+GQEDKAIE LK A +EAK+KSL  +E+EYQMLLVE  IYK     
Sbjct: 121 NFTKIQNIVTKLEMLGQEDKAIEKLKNAAEEAKKKSLPLYEHEYQMLLVELYIYK----- 180

Query: 181 NLFLNRSHLIQKNGDIEEAAKAECLNHDEPSDVRRLLYKTIIELLLNNPQKAEEEWEKFR 240
                        GD+ +A +  CL +D  SDVRR LYK II++L N  Q+A +EWE+FR
Sbjct: 181 -------------GDLVKAEELPCLKNDATSDVRRPLYKAIIKVLQNETQEAIKEWEEFR 240

Query: 241 EMREQFFLPPDIKDSGFYKLVNHFEDFKRVVDLLKQDIDQKKKTK 280
           EMR  F LPPD+KDS FY L+  F+ FKRVV +L++DI +K + K
Sbjct: 241 EMRSAFLLPPDVKDSHFYALLADFDSFKRVVQVLREDIFKKPRAK 267

[Close]

BLAST of CmoCh07G001070 vs. NCBI nr
Match: gi|568826216|ref|XP_006467469.1| (PREDICTED: uncharacterized protein LOC102614771 [Citrus sinensis])

HSP 1 Score: 174.1 bits (440), Expect = 3.4e-40
Identity = 105/280 (37.50%), Postives = 160/280 (57.14%), Query Frame = 1


Query: 1   MAYFSLAFARDVFVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60
           M+ FS    R     + N   +  I TKYG  A  TA+ V+I      + +AYT R   K
Sbjct: 1   MSVFSYPSMRKTLDDIANLFTNITINTKYGAMA-VTATPVVIFA-SFYVAWAYTSRAWRK 60

Query: 61  -KTQRVFTRSMSIGALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMTNTDTPDFPHI 120
            K   V TRSMS+G LHGG++A++R++ YH  RA++        +L+++     PDF  +
Sbjct: 61  HKNHGVLTRSMSVGVLHGGKLALERLIDYHHARADETSLAAAEIELKDLLQEAHPDFKKL 120

Query: 121 QDVLAKMEMIGQEDKAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKVFLTTNLFLN 180
           Q  +AK+EM G+E +A+ IL+KA+++A+ ++  +  YE QML  E LIYK          
Sbjct: 121 QRTVAKLEMSGKEAEAVTILEKALEKAQNENKQHEAYEIQMLREEMLIYK---------- 180

Query: 181 RSHLIQKNGDIEEAAKAECLNHDEPSDVRRLLYKTIIELLLNNPQKAEEEWEKFREMREQ 240
                   GD E+A   +CL+ ++ SD RR LYK II ++L  P++A   WE+F EM+  
Sbjct: 181 --------GDFEKALHCKCLDEEDISDARRPLYKAIINVILEQPKEAFSNWEQFNEMQSN 240

Query: 241 FFLPPDIKDSGFYKLVNHFEDFKRVVDLLKQDIDQKKKTK 280
           F  PPD +D+  Y++++ F+ F  VV+LLK+DI +  K K
Sbjct: 241 FLWPPDQQDAQLYEVIDDFDKFVNVVNLLKRDIQETSKRK 260

[Close]

BLAST of CmoCh07G001070 vs. NCBI nr
Match: gi|657982852|ref|XP_008383480.1| (PREDICTED: uncharacterized protein LOC103446187 [Malus domestica])

HSP 1 Score: 164.9 bits (416), Expect = 2.1e-37
Identity = 101/270 (37.41%), Postives = 158/270 (58.52%), Query Frame = 1


Query: 16  MKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEKKTQRVFTRSMSIGAL 75
           M NF K+F+++T YG  A    +SV ++G     I+     +KE+    + TRSMSI  L
Sbjct: 1   MVNFAKNFRVRTMYGAMATTXFASVYLAGA---YIFRACAMRKEEAQGHILTRSMSIAVL 60

Query: 76  HGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMTNTDTPDFPHIQDVLAKMEMIGQEDKA 135
           HGG++A++R+L+YH++RA++        +L        PD+  +Q V+AK+EM G+E KA
Sbjct: 61  HGGQLALQRLLEYHEVRADKSAVEAAECELRTFLVEQYPDYKKLQSVVAKLEMSGKESKA 120

Query: 136 IEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKVFLTTNLFLNRSHLIQKNGDIEEAAK 195
           IEIL KA+ +A  +   +  YE +MLLVE LIYK                  GD EEA +
Sbjct: 121 IEILAKAIAKAHNEGKKHEAYENEMLLVEMLIYK------------------GDFEEALR 180

Query: 196 AECLNHDEPSDVRRLLYKTIIELLL-NNPQKAEEEWEKFREMREQFFLPPD---IKDSGF 255
           +ECL H E SD RR LYK II ++L  +  +  E W++F  ++E   LP +   +++S  
Sbjct: 181 SECLRHVEISDARRPLYKAIIYIMLKRDKDQIRECWKEFNVLKEFQCLPSNKESLEESHI 240

Query: 256 YKLVNHFEDFKRVVDLLKQDID----QKKK 278
           Y L  ++++F++VV++L+ DI+    +KKK
Sbjct: 241 YNLSTNYDEFEKVVNVLRNDIEGQAWKKKK 249

[Close]

BLAST of CmoCh07G001070 vs. NCBI nr
Match: gi|1009172294|ref|XP_015867193.1| (PREDICTED: uncharacterized protein LOC107404714 [Ziziphus jujuba])

HSP 1 Score: 161.0 bits (406), Expect = 3.0e-36
Identity = 101/278 (36.33%), Postives = 159/278 (57.19%), Query Frame = 1


Query: 15  MMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIY---AYTQRKKEKKT-QRVFTRSM 74
           M+     +F I+TKYG  A      V+  G+ +   Y   A+ +RK E++  +RV +RS+
Sbjct: 26  MVPKIFGNFAIKTKYGALAATATPFVVFGGVYIAWAYLNQAWQRRKDEQRLHRRVLSRSV 85

Query: 75  SIGALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMTNTDTPDFPHIQDVLAKMEMIG 134
           SIGALH G +A++R++ YH+ RAN +       +L  +   +T DF  +Q V+ KMEM G
Sbjct: 86  SIGALHSGNLALQRLIMYHEARANDKTLETAECQLRILLTEETLDFQKLQMVIPKMEMSG 145

Query: 135 QEDKAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKVFLTTNLFLNRSHLIQKNGDI 194
           +E++A+++L+KA+ +A  +   +  YE  ML+VE LIYK                  GD+
Sbjct: 146 KEEQAVDMLEKALTKANGEGKKHEAYEIGMLIVEMLIYK------------------GDL 205

Query: 195 EEAAKAECLN---HDEPSDVRRLLYKTIIELLLNNPQK-AEEEWEKFREMREQFFLPPDI 254
            +A   +CLN   H+  SD RR LYK II +++++ +K A+E W++F  +RE    PP  
Sbjct: 206 SKAKACDCLNDEHHEVISDARRPLYKAIIHIMVDDEEKIAKESWDEFSNIREDLHCPPTF 265

Query: 255 KDS----GFYKLVNHFEDFKRVVDLLKQDIDQK-KKTK 280
           ++S    G   L  +F++FK+VV  LK DID+  KK K
Sbjct: 266 RESMEEIGIQNLSTNFDEFKKVVKRLKDDIDKHIKKAK 285

[Close]

BLAST of CmoCh07G001070 vs. NCBI nr
Match: gi|643730542|gb|KDP37974.1| (hypothetical protein JCGZ_04617 [Jatropha curcas])

HSP 1 Score: 157.1 bits (396), Expect = 4.3e-35
Identity = 98/264 (37.12%), Postives = 153/264 (57.95%), Query Frame = 1


Query: 14  VMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEKKTQRVFTRSMSIG 73
           V+ + F  S    T     A    S VII+   +   +A     K K+ ++VF RS+S+G
Sbjct: 10  VLEREFFYSIGDSTMVRAVAAIATSIVIIASTYIACRFAKRACDKGKRKEKVFKRSVSVG 69

Query: 74  ALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMTNTDTPDFPHIQDVLAKMEMIGQED 133
           ALHGG++AM+R++ Y   RA+    +    +L+ +   + PDF  +Q V+AK+EM G+E 
Sbjct: 70  ALHGGKLAMERLIHYQHARADAASLNAAESELKALLLEEKPDFNKLQTVVAKLEMSGKEA 129

Query: 134 KAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKVFLTTNLFLNRSHLIQKNGDIEEA 193
           +A+EIL+ AV++AK+ + S+  YE +MLLVE LIYK                  GD ++A
Sbjct: 130 EAVEILEGAVQKAKKGNKSHEAYEIEMLLVEMLIYK------------------GDYKKA 189

Query: 194 AKAECL-NHDEPSDVRRLLYKTIIELLLNNP-QKAEEEWEKFREMREQFFL---PPDIKD 253
              +CL +H+E SD RR LYK II ++L+ P ++A + WE+F E+R  F +   PP   D
Sbjct: 190 LNCDCLSDHEEISDARRPLYKAIIYIMLDYPKEEASKNWEEFTEVRTHFQIFQSPPCTVD 249

Query: 254 SGFYKLVNHFEDFKRVVDLLKQDI 273
             F K + +F +F ++V +LK+DI
Sbjct: 250 EQFQKDITNFNEFDKIVKMLKKDI 255

The following BLAST results are available for this feature:

BLAST of CmoCh07G001070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh07G001070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLZ3_CUCSA	1.9e-69	51.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G523380 PE=4 SV=1	[more]
A0A067L1I8_JATCU	3.0e-35	37.12	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04617 PE=4 SV=1	[more]
B9H2B7_POPTR	1.5e-34	35.97	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s06360g PE=4 SV=2	[more]
V4UFI1_9ROSI	1.3e-33	38.39	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10017838mg PE=...	[more]
M5X416_PRUPE	8.2e-33	35.68	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016111mg PE=4 SV=1	[more]

BLAST of CmoCh07G001070 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G34530.1	7.9e-27	33.18	unknown protein	[more]

BLAST of CmoCh07G001070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778721382\|ref\|XP_004134647.2\|	2.7e-69	51.23	PREDICTED: uncharacterized protein LOC101211314 [Cucumis sativus]	[more]
gi\|568826216\|ref\|XP_006467469.1\|	3.4e-40	37.50	PREDICTED: uncharacterized protein LOC102614771 [Citrus sinensis]	[more]
gi\|657982852\|ref\|XP_008383480.1\|	2.1e-37	37.41	PREDICTED: uncharacterized protein LOC103446187 [Malus domestica]	[more]
gi\|1009172294\|ref\|XP_015867193.1\|	3.0e-36	36.33	PREDICTED: uncharacterized protein LOC107404714 [Ziziphus jujuba]	[more]
gi\|643730542\|gb\|KDP37974.1\|	4.3e-35	37.12	hypothetical protein JCGZ_04617 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G001070.1	CmoCh07G001070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 130..244 score: 8.
None	No IPR available	unknown	Coil	Coil	coord: 129..149 scor
None	No IPR available	PANTHER	PTHR36350	FAMILY NOT NAMED	coord: 188..279 score: 5.0E-48coord: 1..169 score: 5.0
None	No IPR available	PANTHER	PTHR36350:SF1	SUBFAMILY NOT NAMED	coord: 188..279 score: 5.0E-48coord: 1..169 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G001070	Cucsa.047730	Cucumber (Gy14) v1	cgycmoB0043
CmoCh07G001070	CmaCh07G001060	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G001070	Cla009773	Watermelon (97103) v1	cmowmB816
CmoCh07G001070	Csa6G523380	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G001070	MELO3C007133	Melon (DHL92) v3.5.1	cmomeB782
CmoCh07G001070	ClCG01G024620	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G001070	CSPI06G36280	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G001070	Lsi01G001490	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G001070	Cp4.1LG19g06100	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G001070	MELO3C007133.2	Melon (DHL92) v3.6.1	cmomedB886
CmoCh07G001070	CsaV3_6G051740	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G001070	Cla97C01G024570	Watermelon (97103) v2	cmowmbB849
CmoCh07G001070	Bhi03G000075	Wax gourd	cmowgoB1062
CmoCh07G001070	Carg15007	Silver-seed gourd	carcmoB0996

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G001070	Watermelon (97103) v2	cmowmbB857
CmoCh07G001070	Wax gourd	cmowgoB1074
CmoCh07G001070	Cucurbita moschata (Rifu)	cmocmoB190
CmoCh07G001070	Cucurbita moschata (Rifu)	cmocmoB350
CmoCh07G001070	Cucurbita moschata (Rifu)	cmocmoB459
CmoCh07G001070	Cucurbita maxima (Rimu)	cmacmoB240
CmoCh07G001070	Cucurbita maxima (Rimu)	cmacmoB429
CmoCh07G001070	Cucurbita maxima (Rimu)	cmacmoB672
CmoCh07G001070	Wild cucumber (PI 183967)	cmocpiB844
CmoCh07G001070	Cucumber (Chinese Long) v2	cmocuB834
CmoCh07G001070	Melon (DHL92) v3.5.1	cmomeB771
CmoCh07G001070	Watermelon (Charleston Gray)	cmowcgB760
CmoCh07G001070	Watermelon (97103) v1	cmowmB809
CmoCh07G001070	Cucurbita pepo (Zucchini)	cmocpeB798
CmoCh07G001070	Cucurbita pepo (Zucchini)	cmocpeB801
CmoCh07G001070	Cucurbita pepo (Zucchini)	cmocpeB818
CmoCh07G001070	Bottle gourd (USVL1VR-Ls)	cmolsiB783
CmoCh07G001070	Cucumber (Gy14) v2	cgybcmoB132
CmoCh07G001070	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G001070	Melon (DHL92) v3.6.1	cmomedB875
CmoCh07G001070	Silver-seed gourd	carcmoB0410
CmoCh07G001070	Silver-seed gourd	carcmoB0572
CmoCh07G001070	Silver-seed gourd	carcmoB1083
CmoCh07G001070	Cucumber (Chinese Long) v3	cmocucB0988