Cla009773 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla009773
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Binding protein (AHRD V1 -- D7LH17_ARALL)
Location	Chr1 : 32733404 .. 32735213 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAACTTCTTCAACAACTTTACGGTCCAAACCAGATATGCAACAACAGCAGGGACCGCAGCGTCGAGTTTCATTATCTCGAGCGTTGGTCTCGTGTTGATTTATGTCCTTACTCAGGTTATAAAGGAGAAAAATTACCACCGTGTTTTTACAAGGTCAATGTCCATGGGAGCTCTACATGGTGGCAAACCAGCCATGAAAAGATTGCTTCAATACCACAAAATGAGAGCAACCCCAAAAAACAAAGATAAATATCTGAAGAAGTTAGAGGAAAAGATCAACTCAGTCCGTCCTAATTTCCTGAAGATTCAGGTTAAGTATTTAACTCTTACGTCAATTTTGAAATGGTTGACATCACTTTTTGAAATGTTTAAAACTACACTCAAACATATATTTTAATCACGATTGAAAACACATTTGAAAAATAATTTTTAAGGTGACTAAATTGATTTTAACAATTTTAAAATCATTCCCAATTATACTACTGGAAAAACACTATAGATTATTCCCATCCAATCAATTCATCCATGCATCAAATGAGTTAGTGTGAATGCTTATCTGATTTTCTTTAATGTGCAACAGGGCATTGTGGCAAAGCTGGAAATGATAGGACAAGAAGATAAAGCTATTGAATTATTAAAAAGAGCAGAAAAAAAAGCTAAGGAAAATTCACTTCCACACCAAGAATATGAATATCAAATGCTTCTCGTGGAAGCACTTATTTACAAGGTGTTTCTCATTACAAACTCGTTATCTGTTCAAATTTTATGTGTTTGTATGCATAAAACATAGGCCAAAATGCAGGGCCACTTGCAGGAGAATGAACAGGTTTCTCAAAGAAATATAACAATTGTCTGCAAATATGAAGGACATATACGTGAAAGTGAAACTAATTACACATATAATATGATGTTAATTACACATTGTAAGTAATGACAAAAGGATGCAGAAAATATATACCATGTGGATTAATTTTCAAAGCATACTCTTCAACTTTGACATGGAACAAGAATTGTGAATCAATCGAGCCTCCTACTCTCTTTTTTGATGCATTTCTAGGGAAACTTTGCGGAAGCAGAAATGGTTCCATGCTTGAATAACGATGACACTTCAGATGTTCGACGCCCGTTATATAAGGTATATTATTTCTCATAAATTTCTTGTAGCGAAAAGGATAAAACCACACAAATAACCTTTTCCCAGATGACAAATAAATTGATTGGGTTTATCATTTATCAAAGGAAGGTCAACTGACCCGGTGGAAAGTAGATGGGTTGCCATTTTTTTGTCAAGTTTATACAGCCCACCATAATCTGGCTTAAACCCCATGATGATTTGTTGCAATTAAAAGCTTCCCCGTTCATGAAAGATTAAAGGTGATATAGCAACTTTTGAAATAAATGATAAAGTTAAGGAGCATTTTTTAATAATTTAAACCAAAGTCCGATCCTATTGCAAGGATTAGTATCCATAAATCATGCTCTTTTCATTCACCCGAATAGCTTAAAGACCTTATATTTCAACAACTAACAAGTTGATAGGCAAGTTCAAAAGCAAATGCATTCAAACTTTTCTCAGTGGCATTTATTCAAACACTTTGCAGGCTATAATTCAACTACTGCTAAGGAACACCCAGAAAGCAGAAGAAGAATGGGAAGAGTTTAAGAATATGAGAAACCAGTACCTGTTTCCACCTGACGTTAAAGACTCTCAATTTTACGCTCTCCTGAACGATTTCGAGCAGTTCAAACAAGTGGTCCACCTGCTCAAACAAGAAATTTTTGAGAAGAAGAAGAAAGCAAAATAG

mRNA sequence

ATGAAAAACTTCTTCAACAACTTTACGGTCCAAACCAGATATGCAACAACAGCAGGGACCGCAGCGTCGAGTTTCATTATCTCGAGCGTTGGTCTCGTGTTGATTTATGTCCTTACTCAGGTTATAAAGGAGAAAAATTACCACCGTGTTTTTACAAGGTCAATGTCCATGGGAGCTCTACATGGTGGCAAACCAGCCATGAAAAGATTGCTTCAATACCACAAAATGAGAGCAACCCCAAAAAACAAAGATAAATATCTGAAGAAGTTAGAGGAAAAGATCAACTCAGTCCGTCCTAATTTCCTGAAGATTCAGGGCATTGTGGCAAAGCTGGAAATGATAGGACAAGAAGATAAAGCTATTGAATTATTAAAAAGAGCAGAAAAAAAAGCTAAGGAAAATTCACTTCCACACCAAGAATATGAATATCAAATGCTTCTCGTGGAAGCACTTATTTACAAGGGAAACTTTGCGGAAGCAGAAATGGTTCCATGCTTGAATAACGATGACACTTCAGATGTTCGACGCCCGTTATATAAGGCTATAATTCAACTACTGCTAAGGAACACCCAGAAAGCAGAAGAAGAATGGGAAGAGTTTAAGAATATGAGAAACCAGTACCTGTTTCCACCTGACGTTAAAGACTCTCAATTTTACGCTCTCCTGAACGATTTCGAGCAGTTCAAACAAGTGGTCCACCTGCTCAAACAAGAAATTTTTGAGAAGAAGAAGAAAGCAAAATAG

Coding sequence (CDS)

ATGAAAAACTTCTTCAACAACTTTACGGTCCAAACCAGATATGCAACAACAGCAGGGACCGCAGCGTCGAGTTTCATTATCTCGAGCGTTGGTCTCGTGTTGATTTATGTCCTTACTCAGGTTATAAAGGAGAAAAATTACCACCGTGTTTTTACAAGGTCAATGTCCATGGGAGCTCTACATGGTGGCAAACCAGCCATGAAAAGATTGCTTCAATACCACAAAATGAGAGCAACCCCAAAAAACAAAGATAAATATCTGAAGAAGTTAGAGGAAAAGATCAACTCAGTCCGTCCTAATTTCCTGAAGATTCAGGGCATTGTGGCAAAGCTGGAAATGATAGGACAAGAAGATAAAGCTATTGAATTATTAAAAAGAGCAGAAAAAAAAGCTAAGGAAAATTCACTTCCACACCAAGAATATGAATATCAAATGCTTCTCGTGGAAGCACTTATTTACAAGGGAAACTTTGCGGAAGCAGAAATGGTTCCATGCTTGAATAACGATGACACTTCAGATGTTCGACGCCCGTTATATAAGGCTATAATTCAACTACTGCTAAGGAACACCCAGAAAGCAGAAGAAGAATGGGAAGAGTTTAAGAATATGAGAAACCAGTACCTGTTTCCACCTGACGTTAAAGACTCTCAATTTTACGCTCTCCTGAACGATTTCGAGCAGTTCAAACAAGTGGTCCACCTGCTCAAACAAGAAATTTTTGAGAAGAAGAAGAAAGCAAAATAG

Protein sequence

MKNFFNNFTVQTRYATTAGTAASSFIISSVGLVLIYVLTQVIKEKNYHRVFTRSMSMGALHGGKPAMKRLLQYHKMRATPKNKDKYLKKLEEKINSVRPNFLKIQGIVAKLEMIGQEDKAIELLKRAEKKAKENSLPHQEYEYQMLLVEALIYKGNFAEAEMVPCLNNDDTSDVRRPLYKAIIQLLLRNTQKAEEEWEEFKNMRNQYLFPPDVKDSQFYALLNDFEQFKQVVHLLKQEIFEKKKKAK

Homology

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BLAST of Cla009773 vs. TrEMBL
Match: A0A0A0KLZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G523380 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.0e-82
Identity = 158/253 (62.45%), Postives = 198/253 (78.26%), Query Frame = 1


Query: 1   MKNFFNNFTVQTRYATTAGTAASSFIISSVGLVLIYVLTQVIKEKNYHRVFTRSMSMGAL 60
           + NF+  F VQT+Y   AG  AS+FI+S VGLVL+Y +T+++K+KN  RVFTRS+S+GAL
Sbjct: 16  LNNFYQKFNVQTKYGPRAGATASTFIVSGVGLVLVYFVTRILKKKNSQRVFTRSISIGAL 75

Query: 61  HGGKPAMKRLLQYHKMRATPKNKDKYLKKLEE------KINSVRPNFLKIQGIVAKLEMI 120
           HGGK AMKRLLQ+ KMRA P+NKDK++KKL+       KI S  PNF KIQ IV KLEM+
Sbjct: 76  HGGKIAMKRLLQFQKMRANPENKDKFMKKLDSRIKLDTKIESEHPNFTKIQNIVTKLEML 135

Query: 121 GQEDKAIELLKRAEKKAKENSLPHQEYEYQMLLVEALIYKGNFAEAEMVPCLNNDDTSDV 180
           GQEDKAIE LK A ++AK+ SLP  E+EYQMLLVE  IYKG+  +AE +PCL ND TSDV
Sbjct: 136 GQEDKAIEKLKNAAEEAKKKSLPLYEHEYQMLLVELYIYKGDLVKAEELPCLKNDATSDV 195

Query: 181 RRPLYKAIIQLLLRNTQKAEEEWEEFKNMRNQYLFPPDVKDSQFYALLNDFEQFKQVVHL 240
           RRPLYKAII++L   TQ+A +EWEEF+ MR+ +L PPDVKDS FYALL DF+ FK+VV +
Sbjct: 196 RRPLYKAIIKVLQNETQEAIKEWEEFREMRSAFLLPPDVKDSHFYALLADFDSFKRVVQV 255

Query: 241 LKQEIFEKKKKAK 248
           L+++IF KK +AK
Sbjct: 256 LREDIF-KKPRAK 267

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BLAST of Cla009773 vs. TrEMBL
Match: V4UFI1_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10017838mg PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.3e-41
Identity = 86/192 (44.79%), Postives = 131/192 (68.23%), Query Frame = 1


Query: 54  SMSMGALHGGKPAMKRLLQYHKMRATPKNKDKYLKKLEEKINSVRPNFLKIQGIVAKLEM 113
           SMS+G LHGGK A++RL+ YH  RA   +      +L++ +    P+F K+Q  VAKLEM
Sbjct: 1   SMSVGVLHGGKLALERLIDYHHARADETSLAAAEIELKDLLQEAHPDFKKLQRTVAKLEM 60

Query: 114 IGQEDKAIELLKRAEKKAKENSLPHQEYEYQMLLVEALIYKGNFAEAEMVPCLNNDDTSD 173
            G+E +A+ +L++A +KA+  +  H+ YE QML  E LIYKG+F +A    CL+ +D SD
Sbjct: 61  SGKEAEAVTILEKALEKAQNENKQHEAYEIQMLREEMLIYKGDFEKALHCKCLDEEDISD 120

Query: 174 VRRPLYKAIIQLLLRNTQKAEEEWEEFKNMRNQYLFPPDVKDSQFYALLNDFEQFKQVVH 233
            RRPLYKAII ++L   ++A   WE+F  M++ +L+PPD +D+Q Y +++DF++F  VV+
Sbjct: 121 ARRPLYKAIINVILEQPKEAFSNWEQFNEMQSNFLWPPDQQDAQLYEVIDDFDKFVNVVN 180

Query: 234 LLKQEIFEKKKK 246
           LLK++I E  K+
Sbjct: 181 LLKRDIQETSKR 192

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BLAST of Cla009773 vs. TrEMBL
Match: A0A067L1I8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04617 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.8e-38
Identity = 95/243 (39.09%), Postives = 146/243 (60.08%), Query Frame = 1


Query: 2   KNFFNNFTVQTRYATTAGTAASSFIISSVGLVLIYVLTQVIKEKNYHRVFTRSMSMGALH 61
           + FF +    T     A  A S  II+S  +   +      K K   +VF RS+S+GALH
Sbjct: 13  REFFYSIGDSTMVRAVAAIATSIVIIASTYIACRFAKRACDKGKRKEKVFKRSVSVGALH 72

Query: 62  GGKPAMKRLLQYHKMRATPKNKDKYLKKLEEKINSVRPNFLKIQGIVAKLEMIGQEDKAI 121
           GGK AM+RL+ Y   RA   + +    +L+  +   +P+F K+Q +VAKLEM G+E +A+
Sbjct: 73  GGKLAMERLIHYQHARADAASLNAAESELKALLLEEKPDFNKLQTVVAKLEMSGKEAEAV 132

Query: 122 ELLKRAEKKAKENSLPHQEYEYQMLLVEALIYKGNFAEAEMVPCL-NNDDTSDVRRPLYK 181
           E+L+ A +KAK+ +  H+ YE +MLLVE LIYKG++ +A    CL ++++ SD RRPLYK
Sbjct: 133 EILEGAVQKAKKGNKSHEAYEIEMLLVEMLIYKGDYKKALNCDCLSDHEEISDARRPLYK 192

Query: 182 AIIQLLL-RNTQKAEEEWEEFKNMRNQYLF---PPDVKDSQFYALLNDFEQFKQVVHLLK 240
           AII ++L    ++A + WEEF  +R  +     PP   D QF   + +F +F ++V +LK
Sbjct: 193 AIIYIMLDYPKEEASKNWEEFTEVRTHFQIFQSPPCTVDEQFQKDITNFNEFDKIVKMLK 252

[Close]

BLAST of Cla009773 vs. TrEMBL
Match: B9H2B7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s06360g PE=4 SV=2)

HSP 1 Score: 164.9 bits (416), Expect = 1.3e-37
Identity = 96/247 (38.87%), Postives = 147/247 (59.51%), Query Frame = 1


Query: 1   MKNFFNNFTVQTRYATTAGTAASSFIISSVGLVLIYVLTQVIKEKN-YHRVFTRSMSMGA 60
           ++NFFN+ TV+ +Y   A TA  + I +SV +   Y      K+K   H VFTRSMS+G 
Sbjct: 14  LENFFNSITVRNKYGAMAATA--TVIFASVYIGWAYAKRSCKKQKKKVHAVFTRSMSVGV 73

Query: 61  LHGGKPAMKRLLQYHKMRATPKNKDKYLKKLEEKINSVRPNFLKIQGIVAKLEMIGQEDK 120
           LHGGK A+ R++ YH+ RA   +      +L++ +    P+F+K+Q  VA+LEM G+E  
Sbjct: 74  LHGGKLALDRVIDYHRARADEASLKSAENELQDLLIEEHPDFVKLQSTVARLEMSGKEAV 133

Query: 121 AIELLKRAEKKAKENSLPHQEYEYQMLLVEALIYKGNFAEAEMVPCLNNDDTSDVRRPLY 180
           A+ +L+   K A++    H  YE +MLLVE  IY+G F +A    CL++++ SD RRPLY
Sbjct: 134 AVGILETQLKSARKEGKSHVAYEIEMLLVEMHIYQGEFKKALACECLSHEEISDARRPLY 193

Query: 181 KAIIQLLLRNTQK-AEEEWEEFKNMRNQYLFPPDVKDSQFYALLNDFEQFKQVVHLLKQE 240
           KAII ++L +  K A   WE+F ++R ++   P    SQ    + +F +F++ V LL+ +
Sbjct: 194 KAIIYIMLEDPGKEAMNCWEKFIDIRIRF-ESPSSHQSQLNEAVTNFNEFEKAVKLLRND 253

Query: 241 IFEKKKK 246
           I E   K
Sbjct: 254 IQEAHGK 257

[Close]

BLAST of Cla009773 vs. TrEMBL
Match: M5X416_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016111mg PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.1e-36
Identity = 84/229 (36.68%), Postives = 142/229 (62.01%), Query Frame = 1


Query: 23  SSFIISSVGLVLIYV--LTQVIKEKNYHRVFTRSMSMGALHGGKPAMKRLLQYHKMRATP 82
           ++ + +S+ +V  Y+    ++ KE++     TRSMS+  LHGG+ A++RL +YH+ RA  
Sbjct: 2   ATVVFASIYVVGAYISRARKMSKEEHQGPRLTRSMSIAVLHGGQLALQRLFEYHEARADK 61

Query: 83  KNKDKYLKKLEEKINSVRPNFLKIQGIVAKLEMIGQEDKAIELLKRAEKKAKENSLPHQE 142
              +    +L+  +    P++ K+Q ++ KLEM G+E +A+E+LK A  KA+     H+ 
Sbjct: 62  SAVEIAECELKTHLAEQHPDYKKLQSVIGKLEMSGKEAQAVEILKNATAKARNEGRNHEA 121

Query: 143 YEYQMLLVEALIYKGNFAEAEMVPCLNNDDTSDVRRPLYKAIIQLLLRNTQKAEEEWEEF 202
           YEY+MLLVE LIYKG+F EA    CL + + SD RRPL+KAI+ ++  N  +  + W EF
Sbjct: 122 YEYEMLLVEMLIYKGDFKEALGRECLRHAEISDARRPLFKAIVHIIEGNKNEGTKYWREF 181

Query: 203 KNMRNQYLFPPDVKDS----QFYALLNDFEQFKQVVHLLKQEIFEKKKK 246
            +++ ++   P +K+S    Q + L  +F +F++VV +LK++I E + K
Sbjct: 182 NDLKEEFHCTPCMKESMEECQLHKLSTNFNEFEKVVDILKKDIIEVQAK 230

[Close]

BLAST of Cla009773 vs. NCBI nr
Match: gi|778721382|ref|XP_004134647.2| (PREDICTED: uncharacterized protein LOC101211314 [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 1.4e-82
Identity = 158/253 (62.45%), Postives = 198/253 (78.26%), Query Frame = 1


Query: 1   MKNFFNNFTVQTRYATTAGTAASSFIISSVGLVLIYVLTQVIKEKNYHRVFTRSMSMGAL 60
           + NF+  F VQT+Y   AG  AS+FI+S VGLVL+Y +T+++K+KN  RVFTRS+S+GAL
Sbjct: 16  LNNFYQKFNVQTKYGPRAGATASTFIVSGVGLVLVYFVTRILKKKNSQRVFTRSISIGAL 75

Query: 61  HGGKPAMKRLLQYHKMRATPKNKDKYLKKLEE------KINSVRPNFLKIQGIVAKLEMI 120
           HGGK AMKRLLQ+ KMRA P+NKDK++KKL+       KI S  PNF KIQ IV KLEM+
Sbjct: 76  HGGKIAMKRLLQFQKMRANPENKDKFMKKLDSRIKLDTKIESEHPNFTKIQNIVTKLEML 135

Query: 121 GQEDKAIELLKRAEKKAKENSLPHQEYEYQMLLVEALIYKGNFAEAEMVPCLNNDDTSDV 180
           GQEDKAIE LK A ++AK+ SLP  E+EYQMLLVE  IYKG+  +AE +PCL ND TSDV
Sbjct: 136 GQEDKAIEKLKNAAEEAKKKSLPLYEHEYQMLLVELYIYKGDLVKAEELPCLKNDATSDV 195

Query: 181 RRPLYKAIIQLLLRNTQKAEEEWEEFKNMRNQYLFPPDVKDSQFYALLNDFEQFKQVVHL 240
           RRPLYKAII++L   TQ+A +EWEEF+ MR+ +L PPDVKDS FYALL DF+ FK+VV +
Sbjct: 196 RRPLYKAIIKVLQNETQEAIKEWEEFREMRSAFLLPPDVKDSHFYALLADFDSFKRVVQV 255

Query: 241 LKQEIFEKKKKAK 248
           L+++IF KK +AK
Sbjct: 256 LREDIF-KKPRAK 267

[Close]

BLAST of Cla009773 vs. NCBI nr
Match: gi|568826216|ref|XP_006467469.1| (PREDICTED: uncharacterized protein LOC102614771 [Citrus sinensis])

HSP 1 Score: 203.0 bits (515), Expect = 6.1e-49
Identity = 105/243 (43.21%), Postives = 154/243 (63.37%), Query Frame = 1


Query: 3   NFFNNFTVQTRYATTAGTAASSFIISSVGLVLIYVLTQVIKEKNYHRVFTRSMSMGALHG 62
           N F N T+ T+Y   A TA    I +S  +   Y      K KN H V TRSMS+G LHG
Sbjct: 18  NLFTNITINTKYGAMAVTATPVVIFASFYVAWAYTSRAWRKHKN-HGVLTRSMSVGVLHG 77

Query: 63  GKPAMKRLLQYHKMRATPKNKDKYLKKLEEKINSVRPNFLKIQGIVAKLEMIGQEDKAIE 122
           GK A++RL+ YH  RA   +      +L++ +    P+F K+Q  VAKLEM G+E +A+ 
Sbjct: 78  GKLALERLIDYHHARADETSLAAAEIELKDLLQEAHPDFKKLQRTVAKLEMSGKEAEAVT 137

Query: 123 LLKRAEKKAKENSLPHQEYEYQMLLVEALIYKGNFAEAEMVPCLNNDDTSDVRRPLYKAI 182
           +L++A +KA+  +  H+ YE QML  E LIYKG+F +A    CL+ +D SD RRPLYKAI
Sbjct: 138 ILEKALEKAQNENKQHEAYEIQMLREEMLIYKGDFEKALHCKCLDEEDISDARRPLYKAI 197

Query: 183 IQLLLRNTQKAEEEWEEFKNMRNQYLFPPDVKDSQFYALLNDFEQFKQVVHLLKQEIFEK 242
           I ++L   ++A   WE+F  M++ +L+PPD +D+Q Y +++DF++F  VV+LLK++I E 
Sbjct: 198 INVILEQPKEAFSNWEQFNEMQSNFLWPPDQQDAQLYEVIDDFDKFVNVVNLLKRDIQET 257

Query: 243 KKK 246
            K+
Sbjct: 258 SKR 259

[Close]

BLAST of Cla009773 vs. NCBI nr
Match: gi|567914753|ref|XP_006449690.1| (hypothetical protein CICLE_v10017838mg, partial [Citrus clementina])

HSP 1 Score: 176.4 bits (446), Expect = 6.1e-41
Identity = 86/192 (44.79%), Postives = 131/192 (68.23%), Query Frame = 1


Query: 54  SMSMGALHGGKPAMKRLLQYHKMRATPKNKDKYLKKLEEKINSVRPNFLKIQGIVAKLEM 113
           SMS+G LHGGK A++RL+ YH  RA   +      +L++ +    P+F K+Q  VAKLEM
Sbjct: 1   SMSVGVLHGGKLALERLIDYHHARADETSLAAAEIELKDLLQEAHPDFKKLQRTVAKLEM 60

Query: 114 IGQEDKAIELLKRAEKKAKENSLPHQEYEYQMLLVEALIYKGNFAEAEMVPCLNNDDTSD 173
            G+E +A+ +L++A +KA+  +  H+ YE QML  E LIYKG+F +A    CL+ +D SD
Sbjct: 61  SGKEAEAVTILEKALEKAQNENKQHEAYEIQMLREEMLIYKGDFEKALHCKCLDEEDISD 120

Query: 174 VRRPLYKAIIQLLLRNTQKAEEEWEEFKNMRNQYLFPPDVKDSQFYALLNDFEQFKQVVH 233
            RRPLYKAII ++L   ++A   WE+F  M++ +L+PPD +D+Q Y +++DF++F  VV+
Sbjct: 121 ARRPLYKAIINVILEQPKEAFSNWEQFNEMQSNFLWPPDQQDAQLYEVIDDFDKFVNVVN 180

Query: 234 LLKQEIFEKKKK 246
           LLK++I E  K+
Sbjct: 181 LLKRDIQETSKR 192

[Close]

BLAST of Cla009773 vs. NCBI nr
Match: gi|657982852|ref|XP_008383480.1| (PREDICTED: uncharacterized protein LOC103446187 [Malus domestica])

HSP 1 Score: 166.8 bits (421), Expect = 4.9e-38
Identity = 98/252 (38.89%), Postives = 151/252 (59.92%), Query Frame = 1


Query: 1   MKNFFNNFTVQTRYATTAGTAASSFIISSVGLVLIYVLTQVIKEKNYHRVFTRSMSMGAL 60
           M NF  NF V+T Y   A T  +S  ++      I+    + KE+    + TRSMS+  L
Sbjct: 1   MVNFAKNFRVRTMYGAMATTXFASVYLAGA---YIFRACAMRKEEAQGHILTRSMSIAVL 60

Query: 61  HGGKPAMKRLLQYHKMRATPKNKDKYLKKLEEKINSVRPNFLKIQGIVAKLEMIGQEDKA 120
           HGG+ A++RLL+YH++RA     +    +L   +    P++ K+Q +VAKLEM G+E KA
Sbjct: 61  HGGQLALQRLLEYHEVRADKSAVEAAECELRTFLVEQYPDYKKLQSVVAKLEMSGKESKA 120

Query: 121 IELLKRAEKKAKENSLPHQEYEYQMLLVEALIYKGNFAEAEMVPCLNNDDTSDVRRPLYK 180
           IE+L +A  KA      H+ YE +MLLVE LIYKG+F EA    CL + + SD RRPLYK
Sbjct: 121 IEILAKAIAKAHNEGKKHEAYENEMLLVEMLIYKGDFEEALRSECLRHVEISDARRPLYK 180

Query: 181 AIIQLLL-RNTQKAEEEWEEFKNMRNQYLFPPD---VKDSQFYALLNDFEQFKQVVHLLK 240
           AII ++L R+  +  E W+EF  ++     P +   +++S  Y L  ++++F++VV++L+
Sbjct: 181 AIIYIMLKRDKDQIRECWKEFNVLKEFQCLPSNKESLEESHIYNLSTNYDEFEKVVNVLR 240

Query: 241 QEI----FEKKK 245
            +I    ++KKK
Sbjct: 241 NDIEGQAWKKKK 249

[Close]

BLAST of Cla009773 vs. NCBI nr
Match: gi|645238024|ref|XP_008225483.1| (PREDICTED: uncharacterized protein LOC103325125 [Prunus mume])

HSP 1 Score: 166.4 bits (420), Expect = 6.3e-38
Identity = 85/229 (37.12%), Postives = 144/229 (62.88%), Query Frame = 1


Query: 23  SSFIISSVGLVLIYV--LTQVIKEKNYHRVFTRSMSMGALHGGKPAMKRLLQYHKMRATP 82
           ++ + +S+ +V  Y+    ++ KE++     TRSMS+  LHGG+ A++RL +YH+ RA  
Sbjct: 2   ATVVFASIYVVGAYISRARKMSKEEHQGPRLTRSMSIAVLHGGQLALQRLFEYHEARADK 61

Query: 83  KNKDKYLKKLEEKINSVRPNFLKIQGIVAKLEMIGQEDKAIELLKRAEKKAKENSLPHQE 142
              +    +L+  +    P++ K+Q ++ KLEM G+E +A+E+LK+A  KA+     H+ 
Sbjct: 62  SAVEIAECELKTHLAEQHPDYKKLQSVIGKLEMSGKEAQAVEILKKATAKARNEGRNHEA 121

Query: 143 YEYQMLLVEALIYKGNFAEAEMVPCLNNDDTSDVRRPLYKAIIQLLLRNTQKAEEEWEEF 202
           YEY+MLLVE LIYKG+F EA    CL + + SD RRPL+KAI+ ++  N  +  + W EF
Sbjct: 122 YEYEMLLVEMLIYKGDFKEALGCECLRHAEISDARRPLFKAIVHIIECNKNEGTKYWREF 181

Query: 203 KNMRNQYLFPPDVKDS----QFYALLNDFEQFKQVVHLLKQEIFEKKKK 246
            +++ ++   P +K+S    Q + L  +F +F++VVH+LK++I E + K
Sbjct: 182 NDLKEEFHCAPSIKESMEECQLHKLSTNFNEFEKVVHMLKKDIIEVQAK 230

The following BLAST results are available for this feature:

BLAST of Cla009773 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLZ3_CUCSA	1.0e-82	62.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G523380 PE=4 SV=1	[more]
V4UFI1_9ROSI	4.3e-41	44.79	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10017838mg PE=...	[more]
A0A067L1I8_JATCU	5.8e-38	39.09	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04617 PE=4 SV=1	[more]
B9H2B7_POPTR	1.3e-37	38.87	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s06360g PE=4 SV=2	[more]
M5X416_PRUPE	4.1e-36	36.68	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016111mg PE=4 SV=1	[more]

BLAST of Cla009773 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778721382\|ref\|XP_004134647.2\|	1.4e-82	62.45	PREDICTED: uncharacterized protein LOC101211314 [Cucumis sativus]	[more]
gi\|568826216\|ref\|XP_006467469.1\|	6.1e-49	43.21	PREDICTED: uncharacterized protein LOC102614771 [Citrus sinensis]	[more]
gi\|567914753\|ref\|XP_006449690.1\|	6.1e-41	44.79	hypothetical protein CICLE_v10017838mg, partial [Citrus clementina]	[more]
gi\|657982852\|ref\|XP_008383480.1\|	4.9e-38	38.89	PREDICTED: uncharacterized protein LOC103446187 [Malus domestica]	[more]
gi\|645238024\|ref\|XP_008225483.1\|	6.3e-38	37.12	PREDICTED: uncharacterized protein LOC103325125 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU08645	watermelon unigene v2 vs TrEMBL	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla009773	Cla009773.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU08645	WMU08645	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 115..230 score: 5.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 112..231 score: 7.5
None	No IPR available	PANTHER	PTHR36350	FAMILY NOT NAMED	coord: 1..247 score: 2.0
None	No IPR available	PANTHER	PTHR36350:SF1	SUBFAMILY NOT NAMED	coord: 1..247 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla009773	Cla97C01G024570	Watermelon (97103) v2	wmwmbB234
Cla009773	Csa6G523380	Cucumber (Chinese Long) v2	cuwmB500
Cla009773	MELO3C007133	Melon (DHL92) v3.5.1	mewmB572
Cla009773	ClCG01G024620	Watermelon (Charleston Gray)	wcgwmB141
Cla009773	CSPI06G36280	Wild cucumber (PI 183967)	cpiwmB519
Cla009773	Cucsa.047730	Cucumber (Gy14) v1	cgywmB026
Cla009773	CmaCh07G001060	Cucurbita maxima (Rimu)	cmawmB826
Cla009773	CmoCh07G001070	Cucurbita moschata (Rifu)	cmowmB816
Cla009773	Lsi01G001490	Bottle gourd (USVL1VR-Ls)	lsiwmB144
Cla009773	Cp4.1LG19g06100	Cucurbita pepo (Zucchini)	cpewmB482
Cla009773	MELO3C007133.2	Melon (DHL92) v3.6.1	medwmB561
Cla009773	Carg15007	Silver-seed gourd	carwmB0730
Cla009773	CsaV3_6G051740	Cucumber (Chinese Long) v3	cucwmB526
Cla009773	Bhi03G000075	Wax gourd	wgowmB427

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla009773	Silver-seed gourd	carwmB0292
Cla009773	Silver-seed gourd	carwmB0420
Cla009773	Silver-seed gourd	carwmB0798
Cla009773	Cucumber (Chinese Long) v3	cucwmB058
Cla009773	Watermelon (97103) v2	wmwmbB261
Cla009773	Wax gourd	wgowmB507
Cla009773	Watermelon (97103) v1	wmwmB084
Cla009773	Cucurbita maxima (Rimu)	cmawmB201
Cla009773	Cucurbita maxima (Rimu)	cmawmB379
Cla009773	Cucurbita maxima (Rimu)	cmawmB628
Cla009773	Cucurbita moschata (Rifu)	cmowmB188
Cla009773	Cucurbita moschata (Rifu)	cmowmB372
Cla009773	Cucurbita moschata (Rifu)	cmowmB619
Cla009773	Melon (DHL92) v3.5.1	mewmB167
Cla009773	Watermelon (Charleston Gray)	wcgwmB238
Cla009773	Cucumber (Chinese Long) v2	cuwmB052
Cla009773	Cucurbita pepo (Zucchini)	cpewmB039
Cla009773	Cucurbita pepo (Zucchini)	cpewmB074
Cla009773	Cucurbita pepo (Zucchini)	cpewmB513
Cla009773	Bottle gourd (USVL1VR-Ls)	lsiwmB200
Cla009773	Cucumber (Gy14) v2	cgybwmB052
Cla009773	Cucumber (Gy14) v2	cgybwmB468
Cla009773	Melon (DHL92) v3.6.1	medwmB164