CmoCh07G000560 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G000560
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Germin-like protein 1
Location	Cmo_Chr07 : 337469 .. 338370 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATACACCTTCTTCATCCCCTTAATTCATCCACACAATTCAAACCTAAACCATATCTAACCTCAATATCTCCAAGTTCTTGTGAAGATCAGCTCATCATGGCCGCCCCACTTTTGTTTCTCACGCTCCTTGCTATAACTTGTTCTGTTGCATGGGCGTCCGATCCAAGCCCACTTCAAGATTTCTGTGTGGCAGATCCTAACAGTCCTGGTAACCATTCTAAATATATATATGCATCTATTTTTGGATTTCGATATTGACGATGCTTGTTTCATTGTGGCACAGTGAAAGTGAACGGCCTAGTTTGCAAGGATCCCAAGCTTGTGGAAGCCAAGGACTTCTTCGGGAGTGGGCTGAATGTAGCAGCCCAAATAACCAACCCCGTCGGCTCCCAAGTAACGCCTGTCAATGTTGTCCAAATCCCAGGGCTCAACACCCTCGGCATCTCTCTCGCCCGCATTGACTTCGCCCCATGGGGCATCAACGCTCCCCACACGCACCCTCGCGCCTCTGAAATCTTGACAGTCCTTGAAGGCACACTCCTTGTTGGCTTCGTCACCTCCAACCCGGAAAACCGTCTCATAACCAAGACGTTGAACAAGGGCGACGTGTTCGTGTTCCCTGTGGGCCTAATTCACTTCCAACAGAACATCGGGTATGGCCCTGCAGTCGCCCTTGCCGCTTTGAGCAGCCAAAACCCAGGTGTTGTAACCATTGCAAATGCTGTGTTTGGATCAAAGCCGGACATCTCCACCGATATCCTTGCAAAGGCCTTCCAAACCGATCCCGCTATTATAGCCAACATTCAGGCCAAGTTTTAGAGAGTATCAGGGTTTGGTTTTGGGTGTGTTCTGTTCTGATTTCATGTTTTAGTTGTCTTGTTTTCAGTTTGGCTACTTG

mRNA sequence

ATAAATACACCTTCTTCATCCCCTTAATTCATCCACACAATTCAAACCTAAACCATATCTAACCTCAATATCTCCAAGTTCTTGTGAAGATCAGCTCATCATGGCCGCCCCACTTTTGTTTCTCACGCTCCTTGCTATAACTTGTTCTGTTGCATGGGCGTCCGATCCAAGCCCACTTCAAGATTTCTGTGTGGCAGATCCTAACAGTCCTGTGAAAGTGAACGGCCTAGTTTGCAAGGATCCCAAGCTTGTGGAAGCCAAGGACTTCTTCGGGAGTGGGCTGAATGTAGCAGCCCAAATAACCAACCCCGTCGGCTCCCAAGTAACGCCTGTCAATGTTGTCCAAATCCCAGGGCTCAACACCCTCGGCATCTCTCTCGCCCGCATTGACTTCGCCCCATGGGGCATCAACGCTCCCCACACGCACCCTCGCGCCTCTGAAATCTTGACAGTCCTTGAAGGCACACTCCTTGTTGGCTTCGTCACCTCCAACCCGGAAAACCGTCTCATAACCAAGACGTTGAACAAGGGCGACGTGTTCGTGTTCCCTGTGGGCCTAATTCACTTCCAACAGAACATCGGGTATGGCCCTGCAGTCGCCCTTGCCGCTTTGAGCAGCCAAAACCCAGGTGTTGTAACCATTGCAAATGCTGTGTTTGGATCAAAGCCGGACATCTCCACCGATATCCTTGCAAAGGCCTTCCAAACCGATCCCGCTATTATAGCCAACATTCAGGCCAAGTTTTAGAGAGTATCAGGGTTTGGTTTTGGGTGTGTTCTGTTCTGATTTCATGTTTTAGTTGTCTTGTTTTCAGTTTGGCTACTTG

Coding sequence (CDS)

ATGGCCGCCCCACTTTTGTTTCTCACGCTCCTTGCTATAACTTGTTCTGTTGCATGGGCGTCCGATCCAAGCCCACTTCAAGATTTCTGTGTGGCAGATCCTAACAGTCCTGTGAAAGTGAACGGCCTAGTTTGCAAGGATCCCAAGCTTGTGGAAGCCAAGGACTTCTTCGGGAGTGGGCTGAATGTAGCAGCCCAAATAACCAACCCCGTCGGCTCCCAAGTAACGCCTGTCAATGTTGTCCAAATCCCAGGGCTCAACACCCTCGGCATCTCTCTCGCCCGCATTGACTTCGCCCCATGGGGCATCAACGCTCCCCACACGCACCCTCGCGCCTCTGAAATCTTGACAGTCCTTGAAGGCACACTCCTTGTTGGCTTCGTCACCTCCAACCCGGAAAACCGTCTCATAACCAAGACGTTGAACAAGGGCGACGTGTTCGTGTTCCCTGTGGGCCTAATTCACTTCCAACAGAACATCGGGTATGGCCCTGCAGTCGCCCTTGCCGCTTTGAGCAGCCAAAACCCAGGTGTTGTAACCATTGCAAATGCTGTGTTTGGATCAAAGCCGGACATCTCCACCGATATCCTTGCAAAGGCCTTCCAAACCGATCCCGCTATTATAGCCAACATTCAGGCCAAGTTTTAG

Homology

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BLAST of CmoCh07G000560 vs. Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.5e-75
Identity = 147/216 (68.06%), Postives = 169/216 (78.24%), Query Frame = 1


Query: 1   MAAPLLFL-TLLAITCSVAWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGS 60
           MA+   FL  LLA++ S A+ASDPS LQDFCVAD  S V VNG  CKDP  +  +DFF S
Sbjct: 1   MASTWFFLLALLAVSISNAFASDPSQLQDFCVADKMSQVLVNGFACKDPAAITVEDFFFS 60

Query: 61  GLNVAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVL 120
           GL++A   +N  GS VT VNV QI GLNTLGISLAR+D+AP+G+N PH HPRA+EILT+L
Sbjct: 61  GLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTIL 120

Query: 121 EGTLLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVV 180
           EG+L VGFVTSNPEN+L TK LNKGDVFVFP GLIHFQ N G    +ALAALSSQNPGV+
Sbjct: 121 EGSLYVGFVTSNPENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVI 180

Query: 181 TIANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           TIANAVFGSKP IS DILAKAFQ +  I+  IQA+F
Sbjct: 181 TIANAVFGSKPFISDDILAKAFQVEKKIVDRIQAQF 216

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BLAST of CmoCh07G000560 vs. Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.1e-73
Identity = 146/213 (68.54%), Postives = 165/213 (77.46%), Query Frame = 1


Query: 5   LLFLTLLAITCSVAWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGSG-LNV 64
           LL   LL +    A ASDPSPLQDFCVAD NSPV+VNG VCK+P    A DFF +  L+ 
Sbjct: 9   LLVAALLGLASWKAIASDPSPLQDFCVADLNSPVRVNGFVCKNPMNASADDFFKAAMLDK 68

Query: 65  AAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLEGTL 124
                N VGS VT VNV+Q+PGLNTLGIS+AR+DFAP G+N PHTHPRA+EI TVLEGTL
Sbjct: 69  PRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTL 128

Query: 125 LVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIG-YGPAVALAALSSQNPGVVTIA 184
            VGFVTSNP+NRL++K LNKGDVFVFP GLIHFQ N   + PAVA+AALSSQNPGV+TIA
Sbjct: 129 YVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIA 188

Query: 185 NAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           NAVFGS P IS DIL KAFQ D  II  +QA+F
Sbjct: 189 NAVFGSNPPISDDILMKAFQVDKKIIDLLQAQF 221

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BLAST of CmoCh07G000560 vs. Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.0e-73
Identity = 142/209 (67.94%), Postives = 164/209 (78.47%), Query Frame = 1


Query: 10  LLAITCSV---AWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGSGLNVAAQ 69
           LLA+ CS      ASDPS LQD CVAD  S V+VNG+ CKD + V A+DFF SGL++A  
Sbjct: 15  LLALWCSDHGGVVASDPSHLQDLCVADKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGN 74

Query: 70  ITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLEGTLLVG 129
            TN  GS VT VNV Q+PGLNTLGISLARID+A  G+N PHTHPRA+EILTVLEG+L VG
Sbjct: 75  TTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVG 134

Query: 130 FVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVTIANAVF 189
           FVTSNPEN+L TK +NKGDVFVFP GL+HFQ N G   AVA+ ALSSQNPGV+T+ANAVF
Sbjct: 135 FVTSNPENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVF 194

Query: 190 GSKPDISTDILAKAFQTDPAIIANIQAKF 216
           GSKP I+ DILAKAFQ +  ++  IQAKF
Sbjct: 195 GSKPSITDDILAKAFQVEKTVVDQIQAKF 223

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BLAST of CmoCh07G000560 vs. Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.3e-73
Identity = 147/219 (67.12%), Postives = 165/219 (75.34%), Query Frame = 1


Query: 1   MAAPLLFLTLLAITCSVAW---ASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFF 60
           MA+P  F  L  +   V+W   ASDPSPLQDFCVAD +SPV VNG  C DPK V A  FF
Sbjct: 1   MASPSSFCLLAVLLALVSWQAIASDPSPLQDFCVADKHSPVLVNGFACLDPKYVNADHFF 60

Query: 61  GSGLNVAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILT 120
            + +    + TN VGS VT +NV+QIPGLNTLGIS+ARID+AP G N PHTHPRA+EILT
Sbjct: 61  KAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILT 120

Query: 121 VLEGTLLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIG-YGPAVALAALSSQNP 180
           VLEGTL VGFVTSNP N L +K LNKGDVFVFP GLIHFQ N   + PAVALAALSSQNP
Sbjct: 121 VLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNP 180

Query: 181 GVVTIANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           G +TIANAVFGSKP IS DILAKAFQ +   I  +QA+F
Sbjct: 181 GAITIANAVFGSKPPISDDILAKAFQVEKGTIDWLQAQF 219

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BLAST of CmoCh07G000560 vs. Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.3e-73
Identity = 146/212 (68.87%), Postives = 162/212 (76.42%), Query Frame = 1


Query: 5   LLFLTLLAITCSV-AWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGSGLNV 64
           L  + LLA+ CS  A ASDP  LQDFCV D  S V+VNG  CKD K V A DFF SGL++
Sbjct: 12  LAVVALLALWCSHGAIASDPGLLQDFCVVDKMSQVRVNGFPCKDAKDVVAGDFFFSGLHM 71

Query: 65  AAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLEGTL 124
           A   TN  GS VT VNV QIPGLNT+G+SL RID+AP G+N PHTHPRA+EI TVLEG+L
Sbjct: 72  AGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSL 131

Query: 125 LVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVTIAN 184
            VGFV SNPEN+L TK LNKGDVFVFP GL+HFQ N G   AVALAALSSQNPGV+T+ N
Sbjct: 132 YVGFVISNPENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGN 191

Query: 185 AVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           AVFGSKP IS DILAKAFQ D  II  IQA+F
Sbjct: 192 AVFGSKPSISDDILAKAFQVDKNIIDRIQAQF 223

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BLAST of CmoCh07G000560 vs. TrEMBL
Match: A0A0A0KIX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525580 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 4.2e-101
Identity = 187/215 (86.98%), Postives = 198/215 (92.09%), Query Frame = 1


Query: 1   MAAPLLFLTLLAITCSVAWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGSG 60
           MA+ L FLT LAITCS+A ASDPSPLQDFCVADPNSPVKVNG+VCKDP  VEAKDF  SG
Sbjct: 1   MASQLFFLTFLAITCSIALASDPSPLQDFCVADPNSPVKVNGVVCKDPNAVEAKDFSMSG 60

Query: 61  LNVAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLE 120
           LNVA    N VGS VTP NVVQIPGLNTLGIS+ RID+APWGINAPHTHPRA+EILTVLE
Sbjct: 61  LNVAGDTNNFVGSAVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 120

Query: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVT 180
           GTLLVGFVTSNPENRLITKTLNKGDVFVFP+GLIHFQQNIGYGPAVA+AALSSQNPGV+T
Sbjct: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPIGLIHFQQNIGYGPAVAIAALSSQNPGVIT 180

Query: 181 IANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           IANAVFGSKPDIST+ILAKAFQTD AIIANIQ+KF
Sbjct: 181 IANAVFGSKPDISTNILAKAFQTDSAIIANIQSKF 215

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BLAST of CmoCh07G000560 vs. TrEMBL
Match: A0A0A0KKX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525590 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 6.0e-100
Identity = 184/215 (85.58%), Postives = 195/215 (90.70%), Query Frame = 1


Query: 1   MAAPLLFLTLLAITCSVAWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGSG 60
           MAA   FLT  A+TCS+A ASDPSPLQDFCVAD NSPVKVNG VCKDP +VEAKDFF SG
Sbjct: 1   MAASAFFLTFFALTCSIALASDPSPLQDFCVADKNSPVKVNGFVCKDPNVVEAKDFFMSG 60

Query: 61  LNVAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLE 120
           LNVA    NPVGS VTP NVVQIPGLNTLGIS+ RID+APWGINAPHTHPRA+EILTVLE
Sbjct: 61  LNVAGDTNNPVGSVVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 120

Query: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVT 180
           GTLLVGFVTSN ENRLITKTLNKGDVFVFPVGL+HFQQNIGYGPAVA+AALSSQNPGV+T
Sbjct: 121 GTLLVGFVTSNTENRLITKTLNKGDVFVFPVGLVHFQQNIGYGPAVAIAALSSQNPGVIT 180

Query: 181 IANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           IANAVFGSKPDI T+ILAKAFQTD AIIANIQ+KF
Sbjct: 181 IANAVFGSKPDIPTNILAKAFQTDSAIIANIQSKF 215

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BLAST of CmoCh07G000560 vs. TrEMBL
Match: A0A0A0KIB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525600 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 7.6e-95
Identity = 180/216 (83.33%), Postives = 194/216 (89.81%), Query Frame = 1


Query: 1   MAAPLLFLTL-LAITCSVAWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGS 60
           MA+ LLF    L I+ S+++ASDPSPLQDFCVADPNSPVKVNGLVCK+P LVEAKDFF S
Sbjct: 1   MASQLLFSAFFLLISFSISFASDPSPLQDFCVADPNSPVKVNGLVCKNPSLVEAKDFFFS 60

Query: 61  GLNVAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVL 120
           GL+VA     P GSQVTPVNVVQIPGLNTLGISLARID+APWGINAPHTHPRA+EILTVL
Sbjct: 61  GLHVAKDTNTPTGSQVTPVNVVQIPGLNTLGISLARIDYAPWGINAPHTHPRATEILTVL 120

Query: 121 EGTLLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVV 180
           EG LLVGF+TSNPENRLITKTL+KGDVFVFPVGLIHFQQNIG+  AVA+AALSSQNPGV+
Sbjct: 121 EGKLLVGFITSNPENRLITKTLHKGDVFVFPVGLIHFQQNIGHHRAVAIAALSSQNPGVI 180

Query: 181 TIANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           TIANAVFGSKPDI TDILAKAFQTDPA I  IQAKF
Sbjct: 181 TIANAVFGSKPDIPTDILAKAFQTDPATITKIQAKF 216

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BLAST of CmoCh07G000560 vs. TrEMBL
Match: A0A0A0KKW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525540 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 5.1e-91
Identity = 166/215 (77.21%), Postives = 190/215 (88.37%), Query Frame = 1


Query: 1   MAAPLLFLTLLAITCSVAWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGSG 60
           ++  +LFL+ LA+TCS+  ASDPSPLQDFCVADPN+PVK+NG+VCKDPKLVEAKDFF SG
Sbjct: 3   ISTQVLFLSFLALTCSIGLASDPSPLQDFCVADPNNPVKLNGIVCKDPKLVEAKDFFRSG 62

Query: 61  LNVAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLE 120
           L+V     N  GSQ+TP ++VQIPGLNTLGISLAR+DFAP  I  PHTHPRA+EILT+LE
Sbjct: 63  LHVPGDTNNSAGSQITPASIVQIPGLNTLGISLARLDFAPNSIVTPHTHPRATEILTLLE 122

Query: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVT 180
           GTLLVGFVTSNPENRLITKTLNKGDVFVFP+GLIHF QNI + PAVA+ A SSQNPG+VT
Sbjct: 123 GTLLVGFVTSNPENRLITKTLNKGDVFVFPIGLIHFHQNIAHRPAVAIVAFSSQNPGIVT 182

Query: 181 IANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           I N+VFGSKPDI T+ILAKAFQT+PAIIANIQ+KF
Sbjct: 183 IENSVFGSKPDIPTNILAKAFQTNPAIIANIQSKF 217

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BLAST of CmoCh07G000560 vs. TrEMBL
Match: M5WIS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017161mg PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.5e-87
Identity = 164/215 (76.28%), Postives = 184/215 (85.58%), Query Frame = 1


Query: 1   MAAPLLFLTLLAITCSVAWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGSG 60
           MA+  L L LLAIT S+A+ASDPS LQDFCVAD  + V VNGLVCKDPKL EA DFF SG
Sbjct: 1   MASKFLLLALLAITSSIAFASDPSSLQDFCVADAMNSVLVNGLVCKDPKLAEANDFFFSG 60

Query: 61  LNVAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLE 120
           L++A   +N VGS+VTPVNV QI GLN LGIS+ARID+APWGIN PHTHPRASEILTVLE
Sbjct: 61  LHLAGNTSNAVGSRVTPVNVAQIAGLNALGISIARIDYAPWGINPPHTHPRASEILTVLE 120

Query: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVT 180
           G+L VGFVTSNPENRLI+K L KGDVFVFPVGL+HFQQN+GYG AVA+AALSSQNPGV+T
Sbjct: 121 GSLKVGFVTSNPENRLISKVLEKGDVFVFPVGLVHFQQNVGYGNAVAIAALSSQNPGVIT 180

Query: 181 IANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           IANAVFGSKPDIS DILAKAFQ +   + N+Q+KF
Sbjct: 181 IANAVFGSKPDISADILAKAFQVEKNTVYNLQSKF 215

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BLAST of CmoCh07G000560 vs. TAIR10
Match: AT5G38940.1 (AT5G38940.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 269.6 bits (688), Expect = 1.6e-72
Identity = 143/213 (67.14%), Postives = 163/213 (76.53%), Query Frame = 1


Query: 5   LLFLTLLAITCSVAWASDPSPLQDFCVADPNSP--VKVNGLVCKDPKLVEAKDFFGSGLN 64
           L  L+LLA+T  +A ASDPS LQDFCV+   S   V VNG  CKDPKLV A DFF SGL 
Sbjct: 9   LAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQ 68

Query: 65  VAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLEGT 124
            A  IT+PVGS VT VNV  + GLNTLGISL RID+A  G N PHTHPRA+EIL V +GT
Sbjct: 69  TARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGT 128

Query: 125 LLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVTIA 184
           LLVGFVTSNP+NRL +K LN+GDVFVFP GLIHFQ NIG  PAVA AALSSQNPGV+TIA
Sbjct: 129 LLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIA 188

Query: 185 NAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           N VFG+ P I+  ILAKAFQ +P ++ ++Q KF
Sbjct: 189 NTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221

[Close]

BLAST of CmoCh07G000560 vs. TAIR10
Match: AT5G38930.1 (AT5G38930.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 265.8 bits (678), Expect = 2.4e-71
Identity = 142/213 (66.67%), Postives = 161/213 (75.59%), Query Frame = 1


Query: 5   LLFLTLLAITCSVAWASDPSPLQDFCVADPNSP--VKVNGLVCKDPKLVEAKDFFGSGLN 64
           L  L+LLA+T  +  ASDPS LQDFCV+  +S   V VNG  CKDPKLV A DFF  GL 
Sbjct: 9   LAALSLLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQ 68

Query: 65  VAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLEGT 124
            A  IT+PVGS VT VNV  + GLNTLGISL RID+A  G N PHTHPRA+EIL V  GT
Sbjct: 69  TARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGT 128

Query: 125 LLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVTIA 184
           LLVGFVTSNP+NRL TK LN+GDVFVFP GLIHFQ NIG  PAVA AALSSQNPGV+TIA
Sbjct: 129 LLVGFVTSNPDNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIA 188

Query: 185 NAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
             VFG+ P I+ +ILAKAFQ DP ++ ++Q KF
Sbjct: 189 PTVFGANPAINPNILAKAFQVDPRVVMDLQTKF 221

[Close]

BLAST of CmoCh07G000560 vs. TAIR10
Match: AT5G39110.1 (AT5G39110.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 260.8 bits (665), Expect = 7.6e-70
Identity = 137/214 (64.02%), Postives = 162/214 (75.70%), Query Frame = 1


Query: 5   LLFLTLLAITCSVAWASDPSPLQDFCVA--DPNSPVKVNGLVCKDPKLVEAKDFFGSGLN 64
           L+ +TL A+  S A A+DPSPLQDFCVA  D  + V VNG  CKDPK  +A+DFF SGLN
Sbjct: 7   LILITLSALVISFAEANDPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLN 66

Query: 65  VAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLEGT 124
            A    N V S VT VNV QIPGLNTLGISL RID+AP+G N PHTHPRA+EIL ++EGT
Sbjct: 67  QAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGT 126

Query: 125 LLVGFVTSNPE-NRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVTI 184
           L VGFV+SN + NRL  K LN GDVFVFP+G+IHFQ NIG  PAVA A LSSQN GV+TI
Sbjct: 127 LYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITI 186

Query: 185 ANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           A+ VFGS P I+ DILA+AFQ D  ++ +++AKF
Sbjct: 187 ADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKF 220

[Close]

BLAST of CmoCh07G000560 vs. TAIR10
Match: AT5G39150.1 (AT5G39150.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 260.0 bits (663), Expect = 1.3e-69
Identity = 137/214 (64.02%), Postives = 163/214 (76.17%), Query Frame = 1


Query: 5   LLFLTLLAITCSVAWASDPSPLQDFCVA--DPNSPVKVNGLVCKDPKLVEAKDFFGSGLN 64
           L+ +TL A+  ++A A DPSPLQDFCVA  DP + V VNG  CKDPK  +A+DFF SGLN
Sbjct: 7   LILITLSALV-TIAKAYDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLN 66

Query: 65  VAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLEGT 124
            A    N V S VT VNV QIPGLNTLGISL RID+AP+G N PHTHPRA+EIL ++EGT
Sbjct: 67  QAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGT 126

Query: 125 LLVGFVTSNPE-NRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVTI 184
           L VGFV+SN + NRL  K LN GDVFVFP+G+IHFQ NIG  PAVA A LSSQN GV+TI
Sbjct: 127 LYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITI 186

Query: 185 ANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           A+ VFGS P I+ DILA+AFQ D  ++ +++AKF
Sbjct: 187 ADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKF 219

[Close]

BLAST of CmoCh07G000560 vs. TAIR10
Match: AT5G39180.1 (AT5G39180.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 259.6 bits (662), Expect = 1.7e-69
Identity = 137/214 (64.02%), Postives = 163/214 (76.17%), Query Frame = 1


Query: 5   LLFLTLLAITCSVAWASDPSPLQDFCVA--DPNSPVKVNGLVCKDPKLVEAKDFFGSGLN 64
           L+ +TL A+  ++A A DPSPLQDFCVA  DP + V VNG  CKDPK  +A+DFF SGLN
Sbjct: 7   LILITLSALV-TIAKAYDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLN 66

Query: 65  VAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLEGT 124
            A    N V S VT VNV QIPGLNTLGISL RID+AP+G N PHTHPRA+EIL ++EGT
Sbjct: 67  QAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGT 126

Query: 125 LLVGFVTSNPE-NRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVTI 184
           L VGFV+SN + NRL  K LN GDVFVFP+G+IHFQ NIG  PAVA A LSSQN GV+TI
Sbjct: 127 LYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITI 186

Query: 185 ANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           A+ VFGS P I+ DILA+AFQ D  ++ +++AKF
Sbjct: 187 ADIVFGSTPPINPDILAQAFQLDVNVVKDLEAKF 219

[Close]

BLAST of CmoCh07G000560 vs. NCBI nr
Match: gi|449433678|ref|XP_004134624.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 6.0e-101
Identity = 187/215 (86.98%), Postives = 198/215 (92.09%), Query Frame = 1


Query: 1   MAAPLLFLTLLAITCSVAWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGSG 60
           MA+ L FLT LAITCS+A ASDPSPLQDFCVADPNSPVKVNG+VCKDP  VEAKDF  SG
Sbjct: 1   MASQLFFLTFLAITCSIALASDPSPLQDFCVADPNSPVKVNGVVCKDPNAVEAKDFSMSG 60

Query: 61  LNVAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLE 120
           LNVA    N VGS VTP NVVQIPGLNTLGIS+ RID+APWGINAPHTHPRA+EILTVLE
Sbjct: 61  LNVAGDTNNFVGSAVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 120

Query: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVT 180
           GTLLVGFVTSNPENRLITKTLNKGDVFVFP+GLIHFQQNIGYGPAVA+AALSSQNPGV+T
Sbjct: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPIGLIHFQQNIGYGPAVAIAALSSQNPGVIT 180

Query: 181 IANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           IANAVFGSKPDIST+ILAKAFQTD AIIANIQ+KF
Sbjct: 181 IANAVFGSKPDISTNILAKAFQTDSAIIANIQSKF 215

[Close]

BLAST of CmoCh07G000560 vs. NCBI nr
Match: gi|449433660|ref|XP_004134615.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 8.6e-100
Identity = 184/215 (85.58%), Postives = 195/215 (90.70%), Query Frame = 1


Query: 1   MAAPLLFLTLLAITCSVAWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGSG 60
           MAA   FLT  A+TCS+A ASDPSPLQDFCVAD NSPVKVNG VCKDP +VEAKDFF SG
Sbjct: 1   MAASAFFLTFFALTCSIALASDPSPLQDFCVADKNSPVKVNGFVCKDPNVVEAKDFFMSG 60

Query: 61  LNVAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLE 120
           LNVA    NPVGS VTP NVVQIPGLNTLGIS+ RID+APWGINAPHTHPRA+EILTVLE
Sbjct: 61  LNVAGDTNNPVGSVVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 120

Query: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVT 180
           GTLLVGFVTSN ENRLITKTLNKGDVFVFPVGL+HFQQNIGYGPAVA+AALSSQNPGV+T
Sbjct: 121 GTLLVGFVTSNTENRLITKTLNKGDVFVFPVGLVHFQQNIGYGPAVAIAALSSQNPGVIT 180

Query: 181 IANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           IANAVFGSKPDI T+ILAKAFQTD AIIANIQ+KF
Sbjct: 181 IANAVFGSKPDIPTNILAKAFQTDSAIIANIQSKF 215

[Close]

BLAST of CmoCh07G000560 vs. NCBI nr
Match: gi|659078083|ref|XP_008439540.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis melo])

HSP 1 Score: 370.9 bits (951), Expect = 1.5e-99
Identity = 184/215 (85.58%), Postives = 198/215 (92.09%), Query Frame = 1


Query: 1   MAAPLLFLTLLAITCSVAWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGSG 60
           MA+ L FL  LAIT S+A ASDPSPLQDFCVADPN+PVKVNG+VCKDP  VEAKDFF SG
Sbjct: 1   MASQLFFLAFLAITSSIALASDPSPLQDFCVADPNNPVKVNGVVCKDPNAVEAKDFFMSG 60

Query: 61  LNVAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVLE 120
           LNVA    N VGS+VTP NVVQIPGLNTLGIS+ RID+APWGINAPHTHPRA+EILTVLE
Sbjct: 61  LNVAGDTNNLVGSKVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 120

Query: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVVT 180
           GTLLVGFVTSNPENRLITKTLNKGDVFVFP+GLIHFQQNIG+GPAVA+AALSSQNPGV+T
Sbjct: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPIGLIHFQQNIGHGPAVAIAALSSQNPGVIT 180

Query: 181 IANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           IANAVFGSKPDI+T+ILAKAFQTD AIIANIQAKF
Sbjct: 181 IANAVFGSKPDIATNILAKAFQTDSAIIANIQAKF 215

[Close]

BLAST of CmoCh07G000560 vs. NCBI nr
Match: gi|659078081|ref|XP_008439539.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis melo])

HSP 1 Score: 369.4 bits (947), Expect = 4.3e-99
Identity = 184/216 (85.19%), Postives = 197/216 (91.20%), Query Frame = 1


Query: 1   MAAPLLFL-TLLAITCSVAWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGS 60
           MAAP+  L T  A+TCS+A ASDPSPLQDFCVAD N+PVKVNG VCKDP +VEAKDFF S
Sbjct: 1   MAAPVFILITFFALTCSIALASDPSPLQDFCVADRNNPVKVNGFVCKDPNVVEAKDFFMS 60

Query: 61  GLNVAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVL 120
           GLNVA    NPVGS VTP NVVQIPGLNTLGIS+ RID+APWGINAPHTHPRA+EILTVL
Sbjct: 61  GLNVAGDTNNPVGSAVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVL 120

Query: 121 EGTLLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVV 180
           EGTLLVGFVTSN ENRLITKTLNKGDVFVFPVGL+HFQQNIGYGPAVA+AALSSQNPGV+
Sbjct: 121 EGTLLVGFVTSNTENRLITKTLNKGDVFVFPVGLVHFQQNIGYGPAVAIAALSSQNPGVI 180

Query: 181 TIANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           TIANAVFGSKPDIST+ILAKAFQTD AIIANIQ+KF
Sbjct: 181 TIANAVFGSKPDISTNILAKAFQTDSAIIANIQSKF 216

[Close]

BLAST of CmoCh07G000560 vs. NCBI nr
Match: gi|449433714|ref|XP_004134642.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis sativus])

HSP 1 Score: 354.8 bits (909), Expect = 1.1e-94
Identity = 180/216 (83.33%), Postives = 194/216 (89.81%), Query Frame = 1


Query: 1   MAAPLLFLTL-LAITCSVAWASDPSPLQDFCVADPNSPVKVNGLVCKDPKLVEAKDFFGS 60
           MA+ LLF    L I+ S+++ASDPSPLQDFCVADPNSPVKVNGLVCK+P LVEAKDFF S
Sbjct: 1   MASQLLFSAFFLLISFSISFASDPSPLQDFCVADPNSPVKVNGLVCKNPSLVEAKDFFFS 60

Query: 61  GLNVAAQITNPVGSQVTPVNVVQIPGLNTLGISLARIDFAPWGINAPHTHPRASEILTVL 120
           GL+VA     P GSQVTPVNVVQIPGLNTLGISLARID+APWGINAPHTHPRA+EILTVL
Sbjct: 61  GLHVAKDTNTPTGSQVTPVNVVQIPGLNTLGISLARIDYAPWGINAPHTHPRATEILTVL 120

Query: 121 EGTLLVGFVTSNPENRLITKTLNKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVV 180
           EG LLVGF+TSNPENRLITKTL+KGDVFVFPVGLIHFQQNIG+  AVA+AALSSQNPGV+
Sbjct: 121 EGKLLVGFITSNPENRLITKTLHKGDVFVFPVGLIHFQQNIGHHRAVAIAALSSQNPGVI 180

Query: 181 TIANAVFGSKPDISTDILAKAFQTDPAIIANIQAKF 216
           TIANAVFGSKPDI TDILAKAFQTDPA I  IQAKF
Sbjct: 181 TIANAVFGSKPDIPTDILAKAFQTDPATITKIQAKF 216

The following BLAST results are available for this feature:

BLAST of CmoCh07G000560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GL21_ORYSJ	2.5e-75	68.06	Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600...	[more]
GL82_ORYSJ	3.1e-73	68.54	Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1	[more]
GL23_ORYSJ	4.0e-73	67.94	Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800...	[more]
GL87_ORYSJ	5.3e-73	67.12	Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1	[more]
GL22_ORYSJ	5.3e-73	68.87	Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700...	[more]

BLAST of CmoCh07G000560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIX1_CUCSA	4.2e-101	86.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525580 PE=3 SV=1	[more]
A0A0A0KKX1_CUCSA	6.0e-100	85.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525590 PE=3 SV=1	[more]
A0A0A0KIB9_CUCSA	7.6e-95	83.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525600 PE=3 SV=1	[more]
A0A0A0KKW4_CUCSA	5.1e-91	77.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525540 PE=3 SV=1	[more]
M5WIS3_PRUPE	4.5e-87	76.28	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017161mg PE=3 SV=1	[more]

BLAST of CmoCh07G000560 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G38940.1	1.6e-72	67.14	RmlC-like cupins superfamily protein	[more]
AT5G38930.1	2.4e-71	66.67	RmlC-like cupins superfamily protein	[more]
AT5G39110.1	7.6e-70	64.02	RmlC-like cupins superfamily protein	[more]
AT5G39150.1	1.3e-69	64.02	RmlC-like cupins superfamily protein	[more]
AT5G39180.1	1.7e-69	64.02	RmlC-like cupins superfamily protein	[more]

BLAST of CmoCh07G000560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433678\|ref\|XP_004134624.1\|	6.0e-101	86.98	PREDICTED: putative germin-like protein 2-1 [Cucumis sativus]	[more]
gi\|449433660\|ref\|XP_004134615.1\|	8.6e-100	85.58	PREDICTED: putative germin-like protein 2-1 [Cucumis sativus]	[more]
gi\|659078083\|ref\|XP_008439540.1\|	1.5e-99	85.58	PREDICTED: putative germin-like protein 2-1 [Cucumis melo]	[more]
gi\|659078081\|ref\|XP_008439539.1\|	4.3e-99	85.19	PREDICTED: putative germin-like protein 2-1 [Cucumis melo]	[more]
gi\|449433714\|ref\|XP_004134642.1\|	1.1e-94	83.33	PREDICTED: putative germin-like protein 2-1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001929	Germin
IPR006045	Cupin_1
IPR011051	RmlC_Cupin_sf
IPR014710	RmlC-like_jellyroll
IPR019780	Germin_Mn-BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0030145	manganese ion binding
GO:0045735	nutrient reservoir activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0045735	nutrient reservoir activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G000560.1	CmoCh07G000560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 172..187 score: 1.8E-28coord: 139..159 score: 1.8E-28coord: 107..127 score: 1.8
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 60..205 score: 7.3
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 59..209 score: 6.0
IPR011051	RmlC-like cupin domain	unknown	SSF51182	RmlC-like cupins	coord: 52..214 score: 2.28
IPR014710	RmlC-like jelly roll fold	GENE3D	G3DSA:2.60.120.10		coord: 21..214 score: 2.0
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 102..115 scor
None	No IPR available	PANTHER	PTHR31238	FAMILY NOT NAMED	coord: 2..215 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G000560	Cucsa.048340	Cucumber (Gy14) v1	cgycmoB0043
CmoCh07G000560	CmaCh03G014530	Cucurbita maxima (Rimu)	cmacmoB672
CmoCh07G000560	MELO3C007062.2	Melon (DHL92) v3.6.1	cmomedB886

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G000560	CmoCh03G014550	Cucurbita moschata (Rifu)	cmocmoB459

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G000560	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G000560	Silver-seed gourd	carcmoB0410
CmoCh07G000560	Silver-seed gourd	carcmoB0539
CmoCh07G000560	Silver-seed gourd	carcmoB0572
CmoCh07G000560	Silver-seed gourd	carcmoB0996
CmoCh07G000560	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G000560	Watermelon (97103) v2	cmowmbB849
CmoCh07G000560	Watermelon (97103) v2	cmowmbB857
CmoCh07G000560	Wax gourd	cmowgoB1062
CmoCh07G000560	Cucurbita moschata (Rifu)	cmocmoB190
CmoCh07G000560	Cucurbita moschata (Rifu)	cmocmoB350
CmoCh07G000560	Cucurbita maxima (Rimu)	cmacmoB240
CmoCh07G000560	Cucurbita maxima (Rimu)	cmacmoB429
CmoCh07G000560	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G000560	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G000560	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G000560	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G000560	Melon (DHL92) v3.5.1	cmomeB782
CmoCh07G000560	Watermelon (Charleston Gray)	cmowcgB760
CmoCh07G000560	Watermelon (97103) v1	cmowmB809
CmoCh07G000560	Watermelon (97103) v1	cmowmB816
CmoCh07G000560	Cucurbita pepo (Zucchini)	cmocpeB798
CmoCh07G000560	Cucurbita pepo (Zucchini)	cmocpeB801
CmoCh07G000560	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G000560	Cucurbita pepo (Zucchini)	cmocpeB818
CmoCh07G000560	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G000560	Bottle gourd (USVL1VR-Ls)	cmolsiB783