CmoCh03G014550 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G014550
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Germin-like protein 1
Location	Cmo_Chr03 : 10501269 .. 10502208 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTCTTCATTCCACACCTTATAGAGACTTGACTTGAAAACAAAGCTTGTACTAATATGGCTTCTGCTCAGCTCCTTCTCCTTGTGCCACTTCTTCTTCTCACTTCTTGTGTTGTTATGGCCTCTGATCCAAGCCCTCTTCAAGATTTCTGCGTTGCGGATGCCAATAGTACAGGTAGTGTTCATATTATGTTCTTAATCTTGGAGTTTTGGTTAATGGGGTTGGTGTGTAACTGATGATTTTGGCAGTGAAAGTGAACGGCGTGGTGTGCAAGGGCCCCAACCTTGTGACTGCGGGTGATTTCTTCTTCAGTGGGCTTAACAAAGCAGGCAACACGTCCACCCCAGTGGGCTCTCGAGTGACGGCTGTGAATGTGGTGCAAATCCCTGGCCTCAACACGCTCGGCATCTCCTTGGCTCGTGTCGACTATGCTCCCTGGGGGATCAACCCGCCCCACACGCACCCGCGCGCCACCGAGATTCTGACCGTCCTCGAAGGCACACTCCTCGTCGGCTTCGTCACCTCCAACACCGAGAATCGTCTCTTCACCAAAGTGCTTTACAAGGGCGATGTGTTTGTTTTTCCGGTGGGTCTCATTCACTTCCAACAGAACATCGGGTACGGACCCGCCGTGGCTCTCGCCGCTCTCAGCAGCCAGAACCCGGGCGTCATCACCATTGCAAATGCAGTGTTTGGGTCTAACCCTGATATTCCGGCCAACATTCTGGCCAAAGCCTTCCAGGTTGAGGAGGCCACCATCACCAAGATTCAGTCCAAATTTTAAGCCCGCTTCTTTAATGTTAAGGTGTGTTGTGTGCGTCCATTGTGTTGAGTTTCAATAATCATTGTGTTTTTAATTATTATTTTCGTTTTAGAGTGTTGTTTTGTTGGGTCCCCATATTTTGTTCAATAAAAATTGATTGATTATTCTATGCTTTA

mRNA sequence

TGTTTCTTCATTCCACACCTTATAGAGACTTGACTTGAAAACAAAGCTTGTACTAATATGGCTTCTGCTCAGCTCCTTCTCCTTGTGCCACTTCTTCTTCTCACTTCTTGTGTTGTTATGGCCTCTGATCCAAGCCCTCTTCAAGATTTCTGCGTTGCGGATGCCAATAGTACAGTGAAAGTGAACGGCGTGGTGTGCAAGGGCCCCAACCTTGTGACTGCGGGTGATTTCTTCTTCAGTGGGCTTAACAAAGCAGGCAACACGTCCACCCCAGTGGGCTCTCGAGTGACGGCTGTGAATGTGGTGCAAATCCCTGGCCTCAACACGCTCGGCATCTCCTTGGCTCGTGTCGACTATGCTCCCTGGGGGATCAACCCGCCCCACACGCACCCGCGCGCCACCGAGATTCTGACCGTCCTCGAAGGCACACTCCTCGTCGGCTTCGTCACCTCCAACACCGAGAATCGTCTCTTCACCAAAGTGCTTTACAAGGGCGATGTGTTTGTTTTTCCGGTGGGTCTCATTCACTTCCAACAGAACATCGGGTACGGACCCGCCGTGGCTCTCGCCGCTCTCAGCAGCCAGAACCCGGGCGTCATCACCATTGCAAATGCAGTGTTTGGGTCTAACCCTGATATTCCGGCCAACATTCTGGCCAAAGCCTTCCAGGTTGAGGAGGCCACCATCACCAAGATTCAGTCCAAATTTTAAGCCCGCTTCTTTAATGTTAAGGTGTGTTGTGTGCGTCCATTGTGTTGAGTTTCAATAATCATTGTGTTTTTAATTATTATTTTCGTTTTAGAGTGTTGTTTTGTTGGGTCCCCATATTTTGTTCAATAAAAATTGATTGATTATTCTATGCTTTA

Coding sequence (CDS)

ATGGCTTCTGCTCAGCTCCTTCTCCTTGTGCCACTTCTTCTTCTCACTTCTTGTGTTGTTATGGCCTCTGATCCAAGCCCTCTTCAAGATTTCTGCGTTGCGGATGCCAATAGTACAGTGAAAGTGAACGGCGTGGTGTGCAAGGGCCCCAACCTTGTGACTGCGGGTGATTTCTTCTTCAGTGGGCTTAACAAAGCAGGCAACACGTCCACCCCAGTGGGCTCTCGAGTGACGGCTGTGAATGTGGTGCAAATCCCTGGCCTCAACACGCTCGGCATCTCCTTGGCTCGTGTCGACTATGCTCCCTGGGGGATCAACCCGCCCCACACGCACCCGCGCGCCACCGAGATTCTGACCGTCCTCGAAGGCACACTCCTCGTCGGCTTCGTCACCTCCAACACCGAGAATCGTCTCTTCACCAAAGTGCTTTACAAGGGCGATGTGTTTGTTTTTCCGGTGGGTCTCATTCACTTCCAACAGAACATCGGGTACGGACCCGCCGTGGCTCTCGCCGCTCTCAGCAGCCAGAACCCGGGCGTCATCACCATTGCAAATGCAGTGTTTGGGTCTAACCCTGATATTCCGGCCAACATTCTGGCCAAAGCCTTCCAGGTTGAGGAGGCCACCATCACCAAGATTCAGTCCAAATTTTAA

Homology

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BLAST of CmoCh03G014550 vs. Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.7e-74
Identity = 150/218 (68.81%), Postives = 168/218 (77.06%), Query Frame = 1


Query: 4   AQLLLLVPLLLLTSCV----VMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFF 63
           A  LL    LL   C     V+ASDPS LQD CVAD  STV+VNGV CK    V A DFF
Sbjct: 6   ASFLLAAAALLALWCSDHGGVVASDPSHLQDLCVADKASTVRVNGVACKDGEDVAAEDFF 65

Query: 64  FSGLNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILT 123
           FSGL+ AGNT+   GS VTAVNV Q+PGLNTLGISLAR+DYA  G+NPPHTHPRATEILT
Sbjct: 66  FSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILT 125

Query: 124 VLEGTLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPG 183
           VLEG+L VGFVTSN EN+LFTKV+ KGDVFVFP GL+HFQ N G   AVA+ ALSSQNPG
Sbjct: 126 VLEGSLYVGFVTSNPENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPG 185

Query: 184 VITIANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           VIT+ANAVFGS P I  +ILAKAFQVE+  + +IQ+KF
Sbjct: 186 VITVANAVFGSKPSITDDILAKAFQVEKTVVDQIQAKF 223

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BLAST of CmoCh03G014550 vs. Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 6.3e-74
Identity = 151/217 (69.59%), Postives = 167/217 (76.96%), Query Frame = 1


Query: 1   MASAQLLLLVPLLLLTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFFF 60
           MAS    LL  LL ++     ASDPS LQDFCVAD  S V VNG  CK P  +T  DFFF
Sbjct: 1   MASTWFFLLA-LLAVSISNAFASDPSQLQDFCVADKMSQVLVNGFACKDPAAITVEDFFF 60

Query: 61  SGLNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTV 120
           SGL+ AGNTS   GS VT VNV QI GLNTLGISLARVDYAP+G+NPPH HPRATEILT+
Sbjct: 61  SGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTI 120

Query: 121 LEGTLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGV 180
           LEG+L VGFVTSN EN+LFTKVL KGDVFVFP GLIHFQ N G    +ALAALSSQNPGV
Sbjct: 121 LEGSLYVGFVTSNPENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGV 180

Query: 181 ITIANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           ITIANAVFGS P I  +ILAKAFQVE+  + +IQ++F
Sbjct: 181 ITIANAVFGSKPFISDDILAKAFQVEKKIVDRIQAQF 216

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BLAST of CmoCh03G014550 vs. Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.3e-71
Identity = 146/218 (66.97%), Postives = 166/218 (76.15%), Query Frame = 1


Query: 1   MASAQLLLLVPLLLLTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFFF 60
           MAS+  LLL  LL + S   MASDPSPLQDFCVAD +S V VNG  C  P  V A  FF 
Sbjct: 1   MASSSFLLLATLLAMASWQGMASDPSPLQDFCVADMHSPVLVNGFACLNPKDVNADHFFK 60

Query: 61  SGLNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTV 120
           + +      +  VGS VT +NV+QIPGLNTLGIS+AR+DYAP G NPPHTHPRATEILTV
Sbjct: 61  AAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTV 120

Query: 121 LEGTLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIG-YGPAVALAALSSQNPG 180
           LEGTL VGFVTSN +N+ F+KVL KGDVFVFPVGLIHFQ N   Y PAVA+AALSSQNPG
Sbjct: 121 LEGTLYVGFVTSNPDNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPG 180

Query: 181 VITIANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
            ITIANAVFGS P I  ++LAKAFQVE+ TI  +Q++F
Sbjct: 181 AITIANAVFGSKPPISDDVLAKAFQVEKGTIDWLQAQF 218

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BLAST of CmoCh03G014550 vs. Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.2e-71
Identity = 143/213 (67.14%), Postives = 163/213 (76.53%), Query Frame = 1


Query: 5   QLLLLVPLLLLTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFFFSGLN 64
           QL ++  L L  S   +ASDP  LQDFCV D  S V+VNG  CK    V AGDFFFSGL+
Sbjct: 11  QLAVVALLALWCSHGAIASDPGLLQDFCVVDKMSQVRVNGFPCKDAKDVVAGDFFFSGLH 70

Query: 65  KAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTVLEGT 124
            AGNT+   GS VT VNV QIPGLNT+G+SL R+DYAP G+NPPHTHPRATEI TVLEG+
Sbjct: 71  MAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGS 130

Query: 125 LLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVITIA 184
           L VGFV SN EN+LFTKVL KGDVFVFP GL+HFQ N G   AVALAALSSQNPGVIT+ 
Sbjct: 131 LYVGFVISNPENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVG 190

Query: 185 NAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           NAVFGS P I  +ILAKAFQV++  I +IQ++F
Sbjct: 191 NAVFGSKPSISDDILAKAFQVDKNIIDRIQAQF 223

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BLAST of CmoCh03G014550 vs. Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 5.0e-71
Identity = 146/218 (66.97%), Postives = 171/218 (78.44%), Query Frame = 1


Query: 2   ASAQLLLLVPLLLLTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFFFS 61
           +S   LL+  LL L S   +ASDPSPLQDFCVAD NS V+VNG VCK P   +A DFF +
Sbjct: 4   SSFSFLLVAALLGLASWKAIASDPSPLQDFCVADLNSPVRVNGFVCKNPMNASADDFFKA 63

Query: 62  G-LNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTV 121
             L+K  +T+  VGS VT VNV+Q+PGLNTLGIS+AR+D+AP G+NPPHTHPRATEI TV
Sbjct: 64  AMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTV 123

Query: 122 LEGTLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIG-YGPAVALAALSSQNPG 181
           LEGTL VGFVTSN +NRL +KVL KGDVFVFP GLIHFQ N   + PAVA+AALSSQNPG
Sbjct: 124 LEGTLYVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPG 183

Query: 182 VITIANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           VITIANAVFGSNP I  +IL KAFQV++  I  +Q++F
Sbjct: 184 VITIANAVFGSNPPISDDILMKAFQVDKKIIDLLQAQF 221

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BLAST of CmoCh03G014550 vs. TrEMBL
Match: A0A0A0KP70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525610 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 9.7e-98
Identity = 186/218 (85.32%), Postives = 199/218 (91.28%), Query Frame = 1


Query: 1   MASAQLLLLV-PLLLLTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFF 60
           MAS+QL++L+  + + TS +V ASDPSPLQDFCVAD N TVKVNGVVCK P  VT  DFF
Sbjct: 1   MASSQLIILILAVFVATSSLVFASDPSPLQDFCVADPNCTVKVNGVVCKDPKAVTVEDFF 60

Query: 61  FSGLNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILT 120
           F+GL+KAGNTS  VGS+VTA NV QIPGLNTLGISLAR+DYAPWGINPPHTHPRA+EILT
Sbjct: 61  FTGLDKAGNTSNAVGSKVTAANVAQIPGLNTLGISLARIDYAPWGINPPHTHPRASEILT 120

Query: 121 VLEGTLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPG 180
           VLEGTLLVGFVTSNTENRLFTKVLYKGD FVFPVGLIHFQQNIGYGPAVALAALSSQNPG
Sbjct: 121 VLEGTLLVGFVTSNTENRLFTKVLYKGDAFVFPVGLIHFQQNIGYGPAVALAALSSQNPG 180

Query: 181 VITIANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           VITIANAVFGSNPDIPANILAKAFQV+ ATITKIQSKF
Sbjct: 181 VITIANAVFGSNPDIPANILAKAFQVDVATITKIQSKF 218

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BLAST of CmoCh03G014550 vs. TrEMBL
Match: A0A0A0KKX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525590 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.4e-88
Identity = 166/203 (81.77%), Postives = 176/203 (86.70%), Query Frame = 1


Query: 15  LTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFFFSGLNKAGNTSTPVG 74
           LT  + +ASDPSPLQDFCVAD NS VKVNG VCK PN+V A DFF SGLN AG+T+ PVG
Sbjct: 13  LTCSIALASDPSPLQDFCVADKNSPVKVNGFVCKDPNVVEAKDFFMSGLNVAGDTNNPVG 72

Query: 75  SRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTVLEGTLLVGFVTSNT 134
           S VT  NVVQIPGLNTLGIS+ R+DYAPWGIN PHTHPRATEILTVLEGTLLVGFVTSNT
Sbjct: 73  SVVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLEGTLLVGFVTSNT 132

Query: 135 ENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVITIANAVFGSNPDI 194
           ENRL TK L KGDVFVFPVGL+HFQQNIGYGPAVA+AALSSQNPGVITIANAVFGS PDI
Sbjct: 133 ENRLITKTLNKGDVFVFPVGLVHFQQNIGYGPAVAIAALSSQNPGVITIANAVFGSKPDI 192

Query: 195 PANILAKAFQVEEATITKIQSKF 218
           P NILAKAFQ + A I  IQSKF
Sbjct: 193 PTNILAKAFQTDSAIIANIQSKF 215

[Close]

BLAST of CmoCh03G014550 vs. TrEMBL
Match: A0A0A0KIB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525600 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.3e-86
Identity = 167/215 (77.67%), Postives = 186/215 (86.51%), Query Frame = 1


Query: 3   SAQLLLLVPLLLLTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFFFSG 62
           ++QLL     LL++  +  ASDPSPLQDFCVAD NS VKVNG+VCK P+LV A DFFFSG
Sbjct: 2   ASQLLFSAFFLLISFSISFASDPSPLQDFCVADPNSPVKVNGLVCKNPSLVEAKDFFFSG 61

Query: 63  LNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTVLE 122
           L+ A +T+TP GS+VT VNVVQIPGLNTLGISLAR+DYAPWGIN PHTHPRATEILTVLE
Sbjct: 62  LHVAKDTNTPTGSQVTPVNVVQIPGLNTLGISLARIDYAPWGINAPHTHPRATEILTVLE 121

Query: 123 GTLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVIT 182
           G LLVGF+TSN ENRL TK L+KGDVFVFPVGLIHFQQNIG+  AVA+AALSSQNPGVIT
Sbjct: 122 GKLLVGFITSNPENRLITKTLHKGDVFVFPVGLIHFQQNIGHHRAVAIAALSSQNPGVIT 181

Query: 183 IANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           IANAVFGS PDIP +ILAKAFQ + ATITKIQ+KF
Sbjct: 182 IANAVFGSKPDIPTDILAKAFQTDPATITKIQAKF 216

[Close]

BLAST of CmoCh03G014550 vs. TrEMBL
Match: A0A0A0KIX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525580 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 5.5e-85
Identity = 165/214 (77.10%), Postives = 176/214 (82.24%), Query Frame = 1


Query: 4   AQLLLLVPLLLLTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFFFSGL 63
           A  L  +  L +T  + +ASDPSPLQDFCVAD NS VKVNGVVCK PN V A DF  SGL
Sbjct: 2   ASQLFFLTFLAITCSIALASDPSPLQDFCVADPNSPVKVNGVVCKDPNAVEAKDFSMSGL 61

Query: 64  NKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTVLEG 123
           N AG+T+  VGS VT  NVVQIPGLNTLGIS+ R+DYAPWGIN PHTHPRATEILTVLEG
Sbjct: 62  NVAGDTNNFVGSAVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLEG 121

Query: 124 TLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVITI 183
           TLLVGFVTSN ENRL TK L KGDVFVFP+GLIHFQQNIGYGPAVA+AALSSQNPGVITI
Sbjct: 122 TLLVGFVTSNPENRLITKTLNKGDVFVFPIGLIHFQQNIGYGPAVAIAALSSQNPGVITI 181

Query: 184 ANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           ANAVFGS PDI  NILAKAFQ + A I  IQSKF
Sbjct: 182 ANAVFGSKPDISTNILAKAFQTDSAIIANIQSKF 215

[Close]

BLAST of CmoCh03G014550 vs. TrEMBL
Match: A0A0A0KIA8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525550 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 7.2e-85
Identity = 163/206 (79.13%), Postives = 179/206 (86.89%), Query Frame = 1


Query: 12  LLLLTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFFFSGLNKAGNTST 71
           L++  +  V ASDPS LQDFCVAD  +TVKVNGVVCK   +VTA DFFFSGL+K GNTS 
Sbjct: 11  LIVTYAVAVFASDPSHLQDFCVADPTNTVKVNGVVCKESEVVTADDFFFSGLHKVGNTSN 70

Query: 72  PVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTVLEGTLLVGFVT 131
           PVGS+VT VNVVQIPGLNTLGISLAR+DYAP GINPPHTHPRATEILTVLEGTL VGFVT
Sbjct: 71  PVGSKVTPVNVVQIPGLNTLGISLARIDYAPLGINPPHTHPRATEILTVLEGTLHVGFVT 130

Query: 132 SNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVITIANAVFGSN 191
           SNTENRLFTKVL KGDVFVFPVGL+HFQ NIG+GPAVALAALSSQNPGVITI NAVFGS 
Sbjct: 131 SNTENRLFTKVLQKGDVFVFPVGLVHFQHNIGHGPAVALAALSSQNPGVITIGNAVFGSK 190

Query: 192 PDIPANILAKAFQVEEATITKIQSKF 218
           PDI  +IL+KAFQ +++ I  IQ+KF
Sbjct: 191 PDISTDILSKAFQTDKSIIAGIQAKF 216

[Close]

BLAST of CmoCh03G014550 vs. TAIR10
Match: AT5G38940.1 (AT5G38940.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 262.7 bits (670), Expect = 2.0e-70
Identity = 145/219 (66.21%), Postives = 163/219 (74.43%), Query Frame = 1


Query: 1   MASAQLLLLVPLLLLTSCVVMASDPSPLQDFCVADANST--VKVNGVVCKGPNLVTAGDF 60
           M S   L ++ LL LT  + +ASDPS LQDFCV+   S   V VNG  CK P LVTA DF
Sbjct: 3   MKSLSFLAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDF 62

Query: 61  FFSGLNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEIL 120
           FFSGL  A   ++PVGS VTAVNV  + GLNTLGISL R+DYA  G NPPHTHPRATEIL
Sbjct: 63  FFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEIL 122

Query: 121 TVLEGTLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNP 180
            V +GTLLVGFVTSN +NRLF+KVL +GDVFVFP GLIHFQ NIG  PAVA AALSSQNP
Sbjct: 123 VVEQGTLLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNP 182

Query: 181 GVITIANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           GVITIAN VFG+NP I   ILAKAFQ+    +  +Q+KF
Sbjct: 183 GVITIANTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221

[Close]

BLAST of CmoCh03G014550 vs. TAIR10
Match: AT5G38930.1 (AT5G38930.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 261.5 bits (667), Expect = 4.5e-70
Identity = 148/220 (67.27%), Postives = 164/220 (74.55%), Query Frame = 1


Query: 1   MASAQLLLLVPLLLLTSCVVMASDPSPLQDFCVADANST---VKVNGVVCKGPNLVTAGD 60
           M S   L  + LL LT  + +ASDPS LQDFCV+ ANS+   V VNG  CK P LVTA D
Sbjct: 3   MKSLSFLAALSLLALTLPLTIASDPSQLQDFCVS-ANSSANGVFVNGKFCKDPKLVTADD 62

Query: 61  FFFSGLNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEI 120
           FFF GL  A   ++PVGS VTAVNV  + GLNTLGISL R+DYA  G NPPHTHPRATEI
Sbjct: 63  FFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEI 122

Query: 121 LTVLEGTLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQN 180
           L V  GTLLVGFVTSN +NRLFTKVL +GDVFVFP GLIHFQ NIG  PAVA AALSSQN
Sbjct: 123 LVVELGTLLVGFVTSNPDNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQN 182

Query: 181 PGVITIANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           PGVITIA  VFG+NP I  NILAKAFQV+   +  +Q+KF
Sbjct: 183 PGVITIAPTVFGANPAINPNILAKAFQVDPRVVMDLQTKF 221

[Close]

BLAST of CmoCh03G014550 vs. TAIR10
Match: AT3G05950.1 (AT3G05950.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 256.1 bits (653), Expect = 1.9e-68
Identity = 138/208 (66.35%), Postives = 156/208 (75.00%), Query Frame = 1


Query: 12  LLLLTSCVVMASDPSPLQDFCVA-DANSTVKVNGVVCKGPNLVTAGDFFFSGLNKAGNTS 71
           LL L S  V   DPSPLQDFCVA D  S V VNG  CK P  V A DFF SGLN AGNT 
Sbjct: 14  LLALASSFVSCYDPSPLQDFCVAVDDASGVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTI 73

Query: 72  TPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTVLEGTLLVGFV 131
             VGS VT VNV +IPGLNTLG+SL R+D+AP G NPPHTHPRATEIL V+EGTLLVGFV
Sbjct: 74  NRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFV 133

Query: 132 TSNTE-NRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVITIANAVFG 191
           TSN + NRLF+KVLY GDVFVFP+G+IHFQ N+G   AVA A L SQNPG ITIA+AVFG
Sbjct: 134 TSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFG 193

Query: 192 SNPDIPANILAKAFQVEEATITKIQSKF 218
           S P I   ILAKAFQ++   +  ++++F
Sbjct: 194 SKPSIMPEILAKAFQLDVNVVKYLEARF 221

[Close]

BLAST of CmoCh03G014550 vs. TAIR10
Match: AT5G39160.1 (AT5G39160.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 255.0 bits (650), Expect = 4.2e-68
Identity = 137/219 (62.56%), Postives = 162/219 (73.97%), Query Frame = 1


Query: 1   MASAQLLLLVPLLLLTSCVVMASDPSPLQDFCVA-DANSTVKVNGVVCKGPNLVTAGDFF 60
           M  +Q L+   ++ L    V A DPSPLQDFCVA D    V VNG  CK P  V A DFF
Sbjct: 1   MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLKGVFVNGRFCKDPKRVDAKDFF 60

Query: 61  FSGLNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILT 120
           FSGLN  GNT+  VGS VT VNV QIPGLNT+GISL R+DYAP G NPPHTHPR +EIL 
Sbjct: 61  FSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILV 120

Query: 121 VLEGTLLVGFVTSNTE-NRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNP 180
           ++EGTL VGFV+SN + NRLF KVL+ GDVFVFP+G+IHFQ N+G  PAVA A LSSQN 
Sbjct: 121 LVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNA 180

Query: 181 GVITIANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           GVITIAN VFGSNP I   +LA+AFQ++ + + ++Q+KF
Sbjct: 181 GVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219

[Close]

BLAST of CmoCh03G014550 vs. TAIR10
Match: AT5G39190.1 (AT5G39190.1 germin-like protein 2)

HSP 1 Score: 254.6 bits (649), Expect = 5.5e-68
Identity = 137/219 (62.56%), Postives = 162/219 (73.97%), Query Frame = 1


Query: 1   MASAQLLLLVPLLLLTSCVVMASDPSPLQDFCVA-DANSTVKVNGVVCKGPNLVTAGDFF 60
           M  +Q L+   ++ L    V A DPSPLQDFCVA D    V VNG  CK P  V A DFF
Sbjct: 1   MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLKGVFVNGRFCKDPKRVDAKDFF 60

Query: 61  FSGLNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILT 120
           FSGLN  GNT+  VGS VT VNV QIPGLNT+GISL R+DYAP G NPPHTHPR +EIL 
Sbjct: 61  FSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILV 120

Query: 121 VLEGTLLVGFVTSNTE-NRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNP 180
           ++EGTL VGFV+SN + NRLF KVL+ GDVFVFP+G+IHFQ N+G  PAVA A LSSQN 
Sbjct: 121 LVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNA 180

Query: 181 GVITIANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           GVITIAN VFGSNP I   +LA+AFQ++ + + ++Q+KF
Sbjct: 181 GVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219

[Close]

BLAST of CmoCh03G014550 vs. NCBI nr
Match: gi|659078077|ref|XP_008439537.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis melo])

HSP 1 Score: 369.4 bits (947), Expect = 4.3e-99
Identity = 186/217 (85.71%), Postives = 200/217 (92.17%), Query Frame = 1


Query: 1   MASAQLLLLVPLLLLTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFFF 60
           MAS+QL+L++ + + TS +V ASDPSPLQDFCVAD N TVKVNGVVCK P +VT  DFFF
Sbjct: 1   MASSQLILILAVFVATSSLVFASDPSPLQDFCVADPNCTVKVNGVVCKDPKVVTVDDFFF 60

Query: 61  SGLNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTV 120
           SGL+KAGNTS  VGS+VTA NVVQIPGLNTLGISLAR+DYAPWGINPPHTHPRA+EILTV
Sbjct: 61  SGLDKAGNTSNAVGSKVTAANVVQIPGLNTLGISLARIDYAPWGINPPHTHPRASEILTV 120

Query: 121 LEGTLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGV 180
           LEGTLLVGFV+SN ENRLFTKVLYKGD FVFPVGLIHFQQNIGYGP VALAALSSQNPGV
Sbjct: 121 LEGTLLVGFVSSNPENRLFTKVLYKGDAFVFPVGLIHFQQNIGYGPVVALAALSSQNPGV 180

Query: 181 ITIANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           ITIANAVFGSNPDIPANILAKAFQV+EATITKIQSKF
Sbjct: 181 ITIANAVFGSNPDIPANILAKAFQVDEATITKIQSKF 217

[Close]

BLAST of CmoCh03G014550 vs. NCBI nr
Match: gi|449433664|ref|XP_004134617.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 1.4e-97
Identity = 186/218 (85.32%), Postives = 199/218 (91.28%), Query Frame = 1


Query: 1   MASAQLLLLV-PLLLLTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFF 60
           MAS+QL++L+  + + TS +V ASDPSPLQDFCVAD N TVKVNGVVCK P  VT  DFF
Sbjct: 1   MASSQLIILILAVFVATSSLVFASDPSPLQDFCVADPNCTVKVNGVVCKDPKAVTVEDFF 60

Query: 61  FSGLNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILT 120
           F+GL+KAGNTS  VGS+VTA NV QIPGLNTLGISLAR+DYAPWGINPPHTHPRA+EILT
Sbjct: 61  FTGLDKAGNTSNAVGSKVTAANVAQIPGLNTLGISLARIDYAPWGINPPHTHPRASEILT 120

Query: 121 VLEGTLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPG 180
           VLEGTLLVGFVTSNTENRLFTKVLYKGD FVFPVGLIHFQQNIGYGPAVALAALSSQNPG
Sbjct: 121 VLEGTLLVGFVTSNTENRLFTKVLYKGDAFVFPVGLIHFQQNIGYGPAVALAALSSQNPG 180

Query: 181 VITIANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           VITIANAVFGSNPDIPANILAKAFQV+ ATITKIQSKF
Sbjct: 181 VITIANAVFGSNPDIPANILAKAFQVDVATITKIQSKF 218

[Close]

BLAST of CmoCh03G014550 vs. NCBI nr
Match: gi|449433660|ref|XP_004134615.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis sativus])

HSP 1 Score: 334.0 bits (855), Expect = 2.0e-88
Identity = 166/203 (81.77%), Postives = 176/203 (86.70%), Query Frame = 1


Query: 15  LTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFFFSGLNKAGNTSTPVG 74
           LT  + +ASDPSPLQDFCVAD NS VKVNG VCK PN+V A DFF SGLN AG+T+ PVG
Sbjct: 13  LTCSIALASDPSPLQDFCVADKNSPVKVNGFVCKDPNVVEAKDFFMSGLNVAGDTNNPVG 72

Query: 75  SRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTVLEGTLLVGFVTSNT 134
           S VT  NVVQIPGLNTLGIS+ R+DYAPWGIN PHTHPRATEILTVLEGTLLVGFVTSNT
Sbjct: 73  SVVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLEGTLLVGFVTSNT 132

Query: 135 ENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVITIANAVFGSNPDI 194
           ENRL TK L KGDVFVFPVGL+HFQQNIGYGPAVA+AALSSQNPGVITIANAVFGS PDI
Sbjct: 133 ENRLITKTLNKGDVFVFPVGLVHFQQNIGYGPAVAIAALSSQNPGVITIANAVFGSKPDI 192

Query: 195 PANILAKAFQVEEATITKIQSKF 218
           P NILAKAFQ + A I  IQSKF
Sbjct: 193 PTNILAKAFQTDSAIIANIQSKF 215

[Close]

BLAST of CmoCh03G014550 vs. NCBI nr
Match: gi|659078081|ref|XP_008439539.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis melo])

HSP 1 Score: 331.6 bits (849), Expect = 1.0e-87
Identity = 166/215 (77.21%), Postives = 181/215 (84.19%), Query Frame = 1


Query: 3   SAQLLLLVPLLLLTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFFFSG 62
           +A + +L+    LT  + +ASDPSPLQDFCVAD N+ VKVNG VCK PN+V A DFF SG
Sbjct: 2   AAPVFILITFFALTCSIALASDPSPLQDFCVADRNNPVKVNGFVCKDPNVVEAKDFFMSG 61

Query: 63  LNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTVLE 122
           LN AG+T+ PVGS VT  NVVQIPGLNTLGIS+ R+DYAPWGIN PHTHPRATEILTVLE
Sbjct: 62  LNVAGDTNNPVGSAVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 121

Query: 123 GTLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVIT 182
           GTLLVGFVTSNTENRL TK L KGDVFVFPVGL+HFQQNIGYGPAVA+AALSSQNPGVIT
Sbjct: 122 GTLLVGFVTSNTENRLITKTLNKGDVFVFPVGLVHFQQNIGYGPAVAIAALSSQNPGVIT 181

Query: 183 IANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           IANAVFGS PDI  NILAKAFQ + A I  IQSKF
Sbjct: 182 IANAVFGSKPDISTNILAKAFQTDSAIIANIQSKF 216

[Close]

BLAST of CmoCh03G014550 vs. NCBI nr
Match: gi|449433714|ref|XP_004134642.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 1.9e-86
Identity = 167/215 (77.67%), Postives = 186/215 (86.51%), Query Frame = 1


Query: 3   SAQLLLLVPLLLLTSCVVMASDPSPLQDFCVADANSTVKVNGVVCKGPNLVTAGDFFFSG 62
           ++QLL     LL++  +  ASDPSPLQDFCVAD NS VKVNG+VCK P+LV A DFFFSG
Sbjct: 2   ASQLLFSAFFLLISFSISFASDPSPLQDFCVADPNSPVKVNGLVCKNPSLVEAKDFFFSG 61

Query: 63  LNKAGNTSTPVGSRVTAVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTVLE 122
           L+ A +T+TP GS+VT VNVVQIPGLNTLGISLAR+DYAPWGIN PHTHPRATEILTVLE
Sbjct: 62  LHVAKDTNTPTGSQVTPVNVVQIPGLNTLGISLARIDYAPWGINAPHTHPRATEILTVLE 121

Query: 123 GTLLVGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVIT 182
           G LLVGF+TSN ENRL TK L+KGDVFVFPVGLIHFQQNIG+  AVA+AALSSQNPGVIT
Sbjct: 122 GKLLVGFITSNPENRLITKTLHKGDVFVFPVGLIHFQQNIGHHRAVAIAALSSQNPGVIT 181

Query: 183 IANAVFGSNPDIPANILAKAFQVEEATITKIQSKF 218
           IANAVFGS PDIP +ILAKAFQ + ATITKIQ+KF
Sbjct: 182 IANAVFGSKPDIPTDILAKAFQTDPATITKIQAKF 216

The following BLAST results are available for this feature:

BLAST of CmoCh03G014550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GL23_ORYSJ	3.7e-74	68.81	Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800...	[more]
GL21_ORYSJ	6.3e-74	69.59	Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600...	[more]
GL811_ORYSJ	1.3e-71	66.97	Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV...	[more]
GL22_ORYSJ	2.2e-71	67.14	Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700...	[more]
GL82_ORYSJ	5.0e-71	66.97	Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1	[more]

BLAST of CmoCh03G014550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP70_CUCSA	9.7e-98	85.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525610 PE=3 SV=1	[more]
A0A0A0KKX1_CUCSA	1.4e-88	81.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525590 PE=3 SV=1	[more]
A0A0A0KIB9_CUCSA	1.3e-86	77.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525600 PE=3 SV=1	[more]
A0A0A0KIX1_CUCSA	5.5e-85	77.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525580 PE=3 SV=1	[more]
A0A0A0KIA8_CUCSA	7.2e-85	79.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525550 PE=3 SV=1	[more]

BLAST of CmoCh03G014550 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G38940.1	2.0e-70	66.21	RmlC-like cupins superfamily protein	[more]
AT5G38930.1	4.5e-70	67.27	RmlC-like cupins superfamily protein	[more]
AT3G05950.1	1.9e-68	66.35	RmlC-like cupins superfamily protein	[more]
AT5G39160.1	4.2e-68	62.56	RmlC-like cupins superfamily protein	[more]
AT5G39190.1	5.5e-68	62.56	germin-like protein 2	[more]

BLAST of CmoCh03G014550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659078077\|ref\|XP_008439537.1\|	4.3e-99	85.71	PREDICTED: putative germin-like protein 2-1 [Cucumis melo]	[more]
gi\|449433664\|ref\|XP_004134617.1\|	1.4e-97	85.32	PREDICTED: putative germin-like protein 2-1 [Cucumis sativus]	[more]
gi\|449433660\|ref\|XP_004134615.1\|	2.0e-88	81.77	PREDICTED: putative germin-like protein 2-1 [Cucumis sativus]	[more]
gi\|659078081\|ref\|XP_008439539.1\|	1.0e-87	77.21	PREDICTED: putative germin-like protein 2-1 [Cucumis melo]	[more]
gi\|449433714\|ref\|XP_004134642.1\|	1.9e-86	77.67	PREDICTED: putative germin-like protein 2-1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001929	Germin
IPR006045	Cupin_1
IPR011051	RmlC_Cupin_sf
IPR014710	RmlC-like_jellyroll
IPR019780	Germin_Mn-BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0030145	manganese ion binding
GO:0045735	nutrient reservoir activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0045735	nutrient reservoir activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G014550.1	CmoCh03G014550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 174..189 score: 3.4E-28coord: 109..129 score: 3.4E-28coord: 141..161 score: 3.4
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 62..209 score: 5.2
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 61..211 score: 9.6
IPR011051	RmlC-like cupin domain	unknown	SSF51182	RmlC-like cupins	coord: 24..216 score: 1.28
IPR014710	RmlC-like jelly roll fold	GENE3D	G3DSA:2.60.120.10		coord: 23..216 score: 5.0
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 104..117 scor
None	No IPR available	PANTHER	PTHR31238	FAMILY NOT NAMED	coord: 2..217 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G014550	Cucsa.048360	Cucumber (Gy14) v1	cgycmoB0040
CmoCh03G014550	MELO3C007062	Melon (DHL92) v3.5.1	cmomeB606

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G014550	CmoCh07G000560	Cucurbita moschata (Rifu)	cmocmoB459

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G014550	Cucumber (Gy14) v1	cgycmoB0481
CmoCh03G014550	Cucurbita maxima (Rimu)	cmacmoB236
CmoCh03G014550	Cucurbita maxima (Rimu)	cmacmoB417
CmoCh03G014550	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G014550	Cucurbita maxima (Rimu)	cmacmoB861
CmoCh03G014550	Wild cucumber (PI 183967)	cmocpiB650
CmoCh03G014550	Wild cucumber (PI 183967)	cmocpiB678
CmoCh03G014550	Cucumber (Chinese Long) v2	cmocuB667
CmoCh03G014550	Melon (DHL92) v3.5.1	cmomeB583
CmoCh03G014550	Watermelon (Charleston Gray)	cmowcgB573
CmoCh03G014550	Watermelon (97103) v1	cmowmB619
CmoCh03G014550	Cucurbita pepo (Zucchini)	cmocpeB603
CmoCh03G014550	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G014550	Cucurbita pepo (Zucchini)	cmocpeB618
CmoCh03G014550	Cucurbita pepo (Zucchini)	cmocpeB628
CmoCh03G014550	Bottle gourd (USVL1VR-Ls)	cmolsiB588
CmoCh03G014550	Bottle gourd (USVL1VR-Ls)	cmolsiB593
CmoCh03G014550	Cucumber (Gy14) v2	cgybcmoB809
CmoCh03G014550	Melon (DHL92) v3.6.1	cmomedB695
CmoCh03G014550	Silver-seed gourd	carcmoB0408
CmoCh03G014550	Silver-seed gourd	carcmoB0571
CmoCh03G014550	Silver-seed gourd	carcmoB0995
CmoCh03G014550	Cucumber (Chinese Long) v3	cmocucB0791
CmoCh03G014550	Watermelon (97103) v2	cmowmbB639
CmoCh03G014550	Wax gourd	cmowgoB0782
CmoCh03G014550	Cucurbita moschata (Rifu)	cmocmoB183
CmoCh03G014550	Cucurbita moschata (Rifu)	cmocmoB334