CmoCh07G000110 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G000110
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr07 : 76059 .. 77590 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTGCCCCTCCCTCTCAAAACCCTAAATTCTCTAGAGGCAATCAATCAAAGCCACCCGGGACTCGGAGCGTGAAGAAGCTCATCGGAGAGAAGAAATATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCCATCAGGAGAGAGATGGTTGAGCCTATTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCTCAACAGGCTGCTCTTGCTGCCCCTAAGCTTCCCGTGCGCCCCTCTCCTTTCACCAATATCTCTACTATGGACGTCGCACCAGCCTCTACTTCAACCGCCGCCGACGCTGCTATGGGTACCCCCTTTCTTCTTTTTATTACTTGTACATGTTTCGTTTTGCTTTTCTTTTTTAATTATTTGGGTTGTGGCTTTAACTTTAGTGGTTTTTCATCTCATTGTATGGAAATTCTTTCATTCTTTCATTCTCTTCGACTCAATCCACGGCGAATCTCGATATCAAAACTATTTCTATTGGCTAGGTGCTCAATTTGTAGTCCGTTCGTCCCTTCTTATGACAATATCCACTTCTTTTTAATTCTTCATGAATTAGTCTGCATTCCTAGCACTCAGATGTTGTAGGATCAAAACGAGAGAGCAGTCAGTGGTGTAGTGTAGGAGGAATGTGGCTCGTTTTTTGAAACTCAACTCTTATTTTAAGCTTTAGGCAGATGAATGCAACTTCTTTTATCATCTTGTATGTATAAGTCATATTAGACGTACAGTATGAAGTATTAAAAATGTTCTCTTTTAATAAGCTAGTAATGTTTGTTTTGGTCCTTTCTCTCTGTGATTATGACCCTAAACCTTTGTCATGAAAACTAAAGGAAGCGTAATGCTAAGTGTTGTTATATTGTGCTTTCCTATGAGCTAGAGACTAGGTTTTGTTTTTAAAATTTTAGAAGAGTTATGTTTTAAGCTGCTGGATGGGGATGGGGTGTTTTGAGAAGAAATCTGGAAAGGGTCTTTCCAACTCCAATGGTGGCAGCTGCAGAAAACAGAAAGAACAATAATAAATCTTCATTACTTGTTGAAACTATTAATTTGAGCTGAGTTGTCTGTAAAAGTAAAGAATATGAATGAGGTTTTGTTGGCTGGCACTCTACTAGGCCTTGAGAATAGAGTTGTTGGATTGGAGGCCCTCATTTATTTGTTTGTTTGTTTGTAATTGCGTGTTACAGAGGTGGAGATGGATGATGGCAGTGAAAGCATGATGGCGCTGAAGGCTGTTGGTGGGATTGGCAAGAAATCCAAAAAGAAATTCAAGGTTGGGAAGGCCAAGCGGCGTGGTAAGTGCAAGATCAAGAGGAATCGCCACATCTAGTCCCGTGGCCACTGTACTTGGATACATGGCCTCTCCCAATACTTAACTATATTGTATTAAGTACTAAGTTCAGTGACATTTGGTTAACCCTTCAAGTTTAATTATTTATTTCTTACTCTCACTCTTCTGTTTACTTGGTCAGCCAATTCTAGCACTTTTTTGTCCAAACCCTGTTCCAAGACTTTACAG

mRNA sequence

TCTGCCCCTCCCTCTCAAAACCCTAAATTCTCTAGAGGCAATCAATCAAAGCCACCCGGGACTCGGAGCGTGAAGAAGCTCATCGGAGAGAAGAAATATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCCATCAGGAGAGAGATGGTTGAGCCTATTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCTCAACAGGCTGCTCTTGCTGCCCCTAAGCTTCCCGTGCGCCCCTCTCCTTTCACCAATATCTCTACTATGGACGTCGCACCAGCCTCTACTTCAACCGCCGCCGACGCTGCTATGGAGGTGGAGATGGATGATGGCAGTGAAAGCATGATGGCGCTGAAGGCTGTTGGTGGGATTGGCAAGAAATCCAAAAAGAAATTCAAGGTTGGGAAGGCCAAGCGGCGTGGTAAGTGCAAGATCAAGAGGAATCGCCACATCTAGTCCCGTGGCCACTGTACTTGGATACATGGCCTCTCCCAATACTTAACTATATTGTATTAAGTACTAAGTTCAGTGACATTTGGTTAACCCTTCAAGTTTAATTATTTATTTCTTACTCTCACTCTTCTGTTTACTTGGTCAGCCAATTCTAGCACTTTTTTGTCCAAACCCTGTTCCAAGACTTTACAG

Coding sequence (CDS)

ATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCCATCAGGAGAGAGATGGTTGAGCCTATTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCTCAACAGGCTGCTCTTGCTGCCCCTAAGCTTCCCGTGCGCCCCTCTCCTTTCACCAATATCTCTACTATGGACGTCGCACCAGCCTCTACTTCAACCGCCGCCGACGCTGCTATGGAGGTGGAGATGGATGATGGCAGTGAAAGCATGATGGCGCTGAAGGCTGTTGGTGGGATTGGCAAGAAATCCAAAAAGAAATTCAAGGTTGGGAAGGCCAAGCGGCGTGGTAAGTGCAAGATCAAGAGGAATCGCCACATCTAG
Homology
[Close]
BLAST of CmoCh07G000110 vs. TrEMBL
Match: A0A0A0KJ42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G538670 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-39
Identity = 99/121 (81.82%), Postives = 111/121 (91.74%), Query Frame = 1 

Query: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFT-NISTMD 60
           MAKSMRSKREKRLRAIRREMV+P YDKK+AAKLAAQ+AALAAPKLPVR SP T N+STMD
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKEAAKLAAQEAALAAPKLPVRSSPLTSNVSTMD 60

Query: 61  VAPASTSTAADAAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRGKCKIKRNRH 120
           VAP STS+AADAAM+V++DD S S + LK VGG+GKKSK+KFKVGKAKRRGKCK+KRNRH
Sbjct: 61  VAPPSTSSAADAAMDVDVDDCSRSDV-LKPVGGVGKKSKRKFKVGKAKRRGKCKVKRNRH 120

[Close]
BLAST of CmoCh07G000110 vs. TrEMBL
Match: D7T9S3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00940 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-28
Identity = 83/124 (66.94%), Postives = 100/124 (80.65%), Query Frame = 1 

Query: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFTNISTMDV 60
           MAKSMRSKREKRLRAIRRE+VEP+YD KDAAKLAAQ+AALAAPKLPVRP+P T+ S    
Sbjct: 1   MAKSMRSKREKRLRAIRRELVEPLYDAKDAAKLAAQEAALAAPKLPVRPTPSTSTSIAAD 60

Query: 61  APASTSTAAD---AAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRGKCKIK-R 120
           A  + ++A D    +M+VEMDDG++S  ALK VGGIGKK++KKFK+ KAKRRGK K   R
Sbjct: 61  ATTAITSAMDLTATSMDVEMDDGNQSRAALKPVGGIGKKAQKKFKMAKAKRRGKGKGNIR 120

[Close]
BLAST of CmoCh07G000110 vs. TrEMBL
Match: A0A067GPI8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033622mg PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-25
Identity = 79/117 (67.52%), Postives = 94/117 (80.34%), Query Frame = 1 

Query: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFTNISTMDV 60
           MAKSMRSKREKRLRAIRRE+VEP Y+KKD AK AAQ+AALAAPKLPVR SP TN  +M++
Sbjct: 1   MAKSMRSKREKRLRAIRREIVEPFYEKKDEAKFAAQEAALAAPKLPVR-SPKTN--SMEI 60

Query: 61  APASTSTAADAAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRGKCKIKRN 118
           A  + ++ AD  M+VEM DG+++  +LK VGGIGKKS KK KVGK KRRGK + K N
Sbjct: 61  ATPTATSTADNNMDVEMADGTQTKGSLKPVGGIGKKSLKKLKVGKNKRRGKGRKKPN 114

[Close]
BLAST of CmoCh07G000110 vs. TrEMBL
Match: I1K388_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G134500 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-25
Identity = 81/120 (67.50%), Postives = 92/120 (76.67%), Query Frame = 1 

Query: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFTNISTMDV 60
           MAKS+RSKREKRLRAIRRE+VEP YDKK+AAKLAAQ+AALAAPKL V   P T +     
Sbjct: 1   MAKSLRSKREKRLRAIRREIVEPFYDKKEAAKLAAQEAALAAPKLEVPSKPNTAME---- 60

Query: 61  APASTSTAADAAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRGKCKIKRNRHI 120
             ASTST  +  ++VEM DGS+SM +LK VGGIGKKSK K K+ K KRRG  KIKRNR I
Sbjct: 61  --ASTSTN-NTNIDVEMADGSQSMASLKPVGGIGKKSKNKLKLAKKKRRGNGKIKRNRKI 113

[Close]
BLAST of CmoCh07G000110 vs. TrEMBL
Match: V4U7B5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017227mg PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.6e-25
Identity = 79/117 (67.52%), Postives = 93/117 (79.49%), Query Frame = 1 

Query: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFTNISTMDV 60
           MAKSMRSKREKRLRAIRRE+VEP Y+KKD AK AAQ+AALAAPKLPVR SP TN  +M++
Sbjct: 1   MAKSMRSKREKRLRAIRREIVEPFYEKKDEAKFAAQEAALAAPKLPVR-SPKTN--SMEI 60

Query: 61  APASTSTAADAAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRGKCKIKRN 118
           A  + ++ AD  M+VEM DG++S  +LK V GIGKKS KK KVGK KRRGK + K N
Sbjct: 61  ATPTATSTADNNMDVEMADGNQSKGSLKPVRGIGKKSLKKLKVGKNKRRGKGRKKPN 114

[Close]
BLAST of CmoCh07G000110 vs. TAIR10
Match: AT1G30880.1 (AT1G30880.1 unknown protein)

HSP 1 Score: 70.9 bits (172), Expect = 6.2e-13
Identity = 61/124 (49.19%), Postives = 76/124 (61.29%), Query Frame = 1 

Query: 1   MAKSMRSKREKRLRAIRREMVEP--IYDKKDAAKLAAQQAALAAPKLPVRP---SPFTNI 60
           MAKSMR KR KRLRAIRRE+VE       ++ AK AA +AALAAPKLPVR    SPF  +
Sbjct: 1   MAKSMRCKRVKRLRAIRREIVEKESFTLTREDAKSAAIEAALAAPKLPVRQAPVSPFMEV 60

Query: 61  STMDVAPASTSTAADAAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRGKCKIK 120
           +T     AS ST      + EMDD  ++    K++  IGKK KKKFK+G   RR K  ++
Sbjct: 61  ATPSSESASASTTIANDSDEEMDDEKKN----KSLKPIGKKLKKKFKLGMKNRRSKGVLR 120

[Close]
BLAST of CmoCh07G000110 vs. NCBI nr
Match: gi|449433465|ref|XP_004134518.1| (PREDICTED: uncharacterized protein LOC101221511 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-39
Identity = 99/121 (81.82%), Postives = 111/121 (91.74%), Query Frame = 1 

Query: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFT-NISTMD 60
           MAKSMRSKREKRLRAIRREMV+P YDKK+AAKLAAQ+AALAAPKLPVR SP T N+STMD
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKEAAKLAAQEAALAAPKLPVRSSPLTSNVSTMD 60

Query: 61  VAPASTSTAADAAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRGKCKIKRNRH 120
           VAP STS+AADAAM+V++DD S S + LK VGG+GKKSK+KFKVGKAKRRGKCK+KRNRH
Sbjct: 61  VAPPSTSSAADAAMDVDVDDCSRSDV-LKPVGGVGKKSKRKFKVGKAKRRGKCKVKRNRH 120

[Close]
BLAST of CmoCh07G000110 vs. NCBI nr
Match: gi|659077867|ref|XP_008439430.1| (PREDICTED: uncharacterized protein LOC103484241 [Cucumis melo])

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-39
Identity = 100/121 (82.64%), Postives = 110/121 (90.91%), Query Frame = 1 

Query: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFT-NISTMD 60
           MAKSMRSKREKRLRAIRREMV+P YDKK+AAKLAAQ+AALAAPKLPVR SPFT N+STMD
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKEAAKLAAQEAALAAPKLPVRSSPFTSNVSTMD 60

Query: 61  VAPASTSTAADAAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRGKCKIKRNRH 120
           VA ASTS+A DAAM+V+MDD S S   LK VGG+GKKSK+KFKVGKAKRRGKCK+KRNRH
Sbjct: 61  VALASTSSAPDAAMDVDMDDCSRS-NTLKPVGGVGKKSKRKFKVGKAKRRGKCKVKRNRH 120

[Close]
BLAST of CmoCh07G000110 vs. NCBI nr
Match: gi|225423559|ref|XP_002272698.1| (PREDICTED: uncharacterized protein LOC100242357 [Vitis vinifera])

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-28
Identity = 83/124 (66.94%), Postives = 100/124 (80.65%), Query Frame = 1 

Query: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFTNISTMDV 60
           MAKSMRSKREKRLRAIRRE+VEP+YD KDAAKLAAQ+AALAAPKLPVRP+P T+ S    
Sbjct: 1   MAKSMRSKREKRLRAIRRELVEPLYDAKDAAKLAAQEAALAAPKLPVRPTPSTSTSIAAD 60

Query: 61  APASTSTAAD---AAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRGKCKIK-R 120
           A  + ++A D    +M+VEMDDG++S  ALK VGGIGKK++KKFK+ KAKRRGK K   R
Sbjct: 61  ATTAITSAMDLTATSMDVEMDDGNQSRAALKPVGGIGKKAQKKFKMAKAKRRGKGKGNIR 120

[Close]
BLAST of CmoCh07G000110 vs. NCBI nr
Match: gi|568828512|ref|XP_006468587.1| (PREDICTED: uncharacterized protein LOC102611829 isoform X1 [Citrus sinensis])

HSP 1 Score: 124.0 bits (310), Expect = 1.8e-25
Identity = 79/117 (67.52%), Postives = 94/117 (80.34%), Query Frame = 1 

Query: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFTNISTMDV 60
           MAKSMRSKREKRLRAIRRE+VEP Y+KKD AK AAQ+AALAAPKLPVR SP TN  +M++
Sbjct: 1   MAKSMRSKREKRLRAIRREIVEPFYEKKDEAKFAAQEAALAAPKLPVR-SPKTN--SMEI 60

Query: 61  APASTSTAADAAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRGKCKIKRN 118
           A  + ++ AD  M+VEM DG+++  +LK VGGIGKKS KK KVGK KRRGK + K N
Sbjct: 61  ATPTATSTADNNMDVEMADGTQTKGSLKPVGGIGKKSLKKLKVGKNKRRGKGRKKPN 114

[Close]
BLAST of CmoCh07G000110 vs. NCBI nr
Match: gi|645238988|ref|XP_008225933.1| (PREDICTED: uncharacterized protein LOC103325531 [Prunus mume])

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-25
Identity = 78/120 (65.00%), Postives = 92/120 (76.67%), Query Frame = 1 

Query: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFTNISTMDV 60
           MAKSMR KREKRLRAIRREMVEP YDKKD AKLAAQ+AALAAPKLPVRP P +  S M+V
Sbjct: 1   MAKSMRCKREKRLRAIRREMVEPYYDKKDEAKLAAQEAALAAPKLPVRPPPKSG-SAMEV 60

Query: 61  APASTSTAADAAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRGKCKIKRNRHI 120
               ++TA+ + M+V+M  GS+ M  LK  GGIGKKSK+ FKVGK +R+GK    + RHI
Sbjct: 61  TTTDSTTASTSNMDVDMVGGSQRMNFLKPGGGIGKKSKRVFKVGKRRRQGKGGKVKKRHI 119

The following BLAST results are available for this feature:
BLAST of CmoCh07G000110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh07G000110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ42_CUCSA1.9e-3981.82Uncharacterized protein OS=Cucumis sativus GN=Csa_6G538670 PE=4 SV=1[more]
D7T9S3_VITVI1.2e-2866.94Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00940 PE=4 SV=... [more]
A0A067GPI8_CITSI1.2e-2567.52Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033622mg PE=4 SV=1[more]
I1K388_SOYBN2.7e-2567.50Uncharacterized protein OS=Glycine max GN=GLYMA_05G134500 PE=4 SV=1[more]
V4U7B5_9ROSI4.6e-2567.52Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017227mg PE=4 SV=1[more]
BLAST of CmoCh07G000110 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G30880.16.2e-1349.19 unknown protein[more]
BLAST of CmoCh07G000110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433465|ref|XP_004134518.1|2.8e-3981.82PREDICTED: uncharacterized protein LOC101221511 [Cucumis sativus][more]
gi|659077867|ref|XP_008439430.1|2.8e-3982.64PREDICTED: uncharacterized protein LOC103484241 [Cucumis melo][more]
gi|225423559|ref|XP_002272698.1|1.7e-2866.94PREDICTED: uncharacterized protein LOC100242357 [Vitis vinifera][more]
gi|568828512|ref|XP_006468587.1|1.8e-2567.52PREDICTED: uncharacterized protein LOC102611829 isoform X1 [Citrus sinensis][more]
gi|645238988|ref|XP_008225933.1|2.3e-2565.00PREDICTED: uncharacterized protein LOC103325531 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G000110.1CmoCh07G000110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36320FAMILY NOT NAMEDcoord: 2..120
score: 4.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G000110CmaCh03G015050Cucurbita maxima (Rimu)cmacmoB672
CmoCh07G000110MELO3C007002Melon (DHL92) v3.5.1cmomeB782
CmoCh07G000110Lsi01G000130Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G000110Cp4.1LG10g06860Cucurbita pepo (Zucchini)cmocpeB801
CmoCh07G000110CsaV3_6G053080Cucumber (Chinese Long) v3cmocucB1019
CmoCh07G000110BhiUN587G5Wax gourdcmowgoB1042
CmoCh07G000110Carg24625Silver-seed gourdcarcmoB1439
CmoCh07G000110Carg14921Silver-seed gourdcarcmoB0996
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh07G000110CmoCh03G015060Cucurbita moschata (Rifu)cmocmoB459
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G000110Cucumber (Gy14) v1cgycmoB0043
CmoCh07G000110Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G000110Wild cucumber (PI 183967)cmocpiB873
CmoCh07G000110Watermelon (Charleston Gray)cmowcgB755
CmoCh07G000110Cucumber (Chinese Long) v2cmocuB865
CmoCh07G000110Watermelon (97103) v1cmowmB816
CmoCh07G000110Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G000110Cucumber (Gy14) v2cgybcmoB843
CmoCh07G000110Melon (DHL92) v3.6.1cmomedB886
CmoCh07G000110Watermelon (97103) v2cmowmbB849