CmaCh03G015050 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATAATTATAAAATCCGATTTTTAATACTTGAAACAAACATTAAGAGAGAGGAGGTCCTTATAACCCTACATTCGCCCAAACCCCTAAACTTGGTCGGCCACGCGATCGAAGCAACCTCAGACTCAGAGCGAAGAAACTCGTCGGGGAGAAGAAAGATGGCGAAATCCATGAGATCGAAGAGAGAGAAGAGACTGCGGGCCATCCGGAGAGACATGGTTGACCCTTTTTACGACAAGAAAGACGCAGCGAAGCTTGCTGCTCAAGAGGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCATCTCCTTTCACTTCCAATATTTCTACTATGGACGTCGCATCAGCCTCTGCTTCTACTAACGCCGACTCTGCCATGGGTATCCCCTTTGTTCCTTCTATTACTTGCACACCTTTCTTTTTGCTCCTCTATGTTCATTCTTTAGGTTTTTGGATTTCATTGTTGTGGTTTTTCATCTCATTATATGAAAATTCTTTCATCCTTGCCCTCTTTTGCTTTGTTCACTCAACCCATGATGAATATCGTAACCGAAGTCATTCTATCATCCAAATGCACAATCTTTGTACGGTTAAAAGAGGGGTAAGAGGGAGGGAGACATAGAGAGACAACCCTCGAATAAATTCCAAGCAATTCACAGCCCCCACTTTTGTGGCCTGATATGTTGAGGCTTTGCTTCCATCCACTTCGTGGGCTAGTCTACATTTTTAGCTCTAAAACTTGATTTTGAAAAAAAGAACAATTCATCGTAGTTTTAATTATGAATGAATAAGAGTATTTACACACAGGCGGCCTCTAAGAAGATTACAACTAATCTTAAAATCACGAGGTTAACAGAGTCACTGAACTAAACAGAAAGCTAGCAACTGAAATAACAGATTAAATATACATATAGTTAACAGGAGTCAGGATGTCACAGTCGTATTTTCCACAATTAGCTCGGATAGAGAAAATAGAGGGGTAATATGGAAGGATAGTTGGCCAACTTCAATATACAATTGTTATGTTTCCTTTCTTATGGAGGTCAAAATGTTTTTGTGAAAGTTCGTTTGTGACAGTCTAGACTTGGTTTTCTCTGTTTTCAACTCATATTTTATGCTATAGGTGTTGATGAATACAACTTCTTTTTAATGATGTTTTAGCCATATAGCTGTTCAATTCTTTCAAGTGTCGAGTTACTTATTTCCCGTAATTATTATTTCACCATCTATGTTTTGTCTGCGACGTTAATTTATGTGACAGTTGAATTAAAATGGTTTTAAAGCTTTCCCGATCAGAAATATCCAAGTTTGTTCGTCAAACAACTTCTGAGGGAAAGTTACCATATGTTGTTCCTATCCCATATCCAGCGTCACAAGACATCCCGAATGAACAAAAAAAGTATTTCCTGCTAAGGGGCTATGTCTGTTTTTTAGCCTTCTCTCTTTCTGATTGTGATCCTACTGTTTTTTTTTTTTTTTTTTTTTTAAATGAAAATGTCATGTGCCATTCTAAGCGTTATTCCTGGTGTTCTATTGTGCTTTCCTACGTGCTTGTATCTGAGAGATTAGCTTATGATTTTAAAATTTTAGAAGAGGTATGTTGCTGTCAGTCCTAATGCGGAGCTCTTCATTGAGTCTTTAGTGTGATTTGCACAAGGTCTTCTTTACTCCAACGATGGCTCCTTCAAAAAATGGTAAACCTTTAACAGTTGTTGAAACTATCGTCTGAACTTTTAGTTGGGCATTTTTAAGGAATATAAGGAAGTTTCCTTTTTCTTGGAGTTCATCATGGGGTGGGGAATTTGAACCTTTTGTTGAAGGTACACAATTTATGGCAGTTGAGCAGTGCTCACTTAACAGTGGAATTGTAATACAACCCAGCTTCATTACATCACGTACAAGTTCTGTTCTCATTTGTGGTGGTGCAGATGTATTTATTAGCATTGGGCCTTTCTATGTATGGTTTGAATTATTTGAGAATAGATGTGTGGAAGGTGTTAATTTCTTTGTTTGTGTTGCAGATGTGGAGATGAATGAATATGGTGAAAGCACGACACTGAAGGCTGTAGGTGGAATTGGGAAGAAATCGAAAAGAAAATTCAAGGTTGGCAAGGCCAAGCGCCGGGGTAAGTGCAAGATCAAGAGGAACCGCCACATTTAAACCCTGAGAGATGAATCGGGTACATTTTTCCCCAGTGGCCAGTATAGATAGATATTCTATTGGAATAGTACTATATTATGTTATTTCAGTTCATTTGTCACGCTATAATTTTTGGAATAGGCTGTCTTGAAGATATATCGTATTTGACCCAATGCATAGATAGAGTAATATAAGTATAGCAAGTAGTTGAAATTGGGAGGATGGGTTTTTGTGAAAGAAGACGAACTGTGATGATAATTTATTTATTTTATTATGATTTAATAGGATAGGATAAAAAAGCATTATCCAAAAGAGTAGGGTGATTTGGATGAGTAGCTCCTTATCTTTATTTTTTCTTCAACCCAAAGTCTCAACTTTGGGGTGGAAGCGAGATAGATGGTCAAATTCTCCCTCCCTTTACGTTTTCGTCTTCCTGAATCCCAAATCCCACCTCTGAAACACACGACGATTATGTTTCTGCAATCAAGAGTAAGCAATGCAATAGGAGAGAGACTAATTTCTCTCTCTTTTTTTAATAAAAAT AATAATTATAAAATCCGATTTTTAATACTTGAAACAAACATTAAGAGAGAGGAGGTCCTTATAACCCTACATTCGCCCAAACCCCTAAACTTGGTCGGCCACGCGATCGAAGCAACCTCAGACTCAGAGCGAAGAAACTCGTCGGGGAGAAGAAAGATGGCGAAATCCATGAGATCGAAGAGAGAGAAGAGACTGCGGGCCATCCGGAGAGACATGGTTGACCCTTTTTACGACAAGAAAGACGCAGCGAAGCTTGCTGCTCAAGAGGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCATCTCCTTTCACTTCCAATATTTCTACTATGGACGTCGCATCAGCCTCTGCTTCTACTAACGCCGACTCTGCCATGGATGTGGAGATGAATGAATATGGTGAAAGCACGACACTGAAGGCTGTAGGTGGAATTGGGAAGAAATCGAAAAGAAAATTCAAGGTTGGCAAGGCCAAGCGCCGGGGTAAGTGCAAGATCAAGAGGAACCGCCACATTTAAACCCTGAGAGATGAATCGGGTACATTTTTCCCCAGTGGCCAGTATAGATAGATATTCTATTGGAATAGTACTATATTATGTTATTTCAGTTCATTTGTCACGCTATAATTTTTGGAATAGGCTGTCTTGAAGATATATCGTATTTGACCCAATGCATAGATAGAGTAATATAAGTATAGCAAGTAGTTGAAATTGGGAGGATGGGTTTTTGTGAAAGAAGACGAACTGTGATGATAATTTATTTATTTTATTATGATTTAATAGGATAGGATAAAAAAGCATTATCCAAAAGAGTAGGGTGATTTGGATGAGTAGCTCCTTATCTTTATTTTTTCTTCAACCCAAAGTCTCAACTTTGGGGTGGAAGCGAGATAGATGGTCAAATTCTCCCTCCCTTTACGTTTTCGTCTTCCTGAATCCCAAATCCCACCTCTGAAACACACGACGATTATGTTTCTGCAATCAAGAGTAAGCAATGCAATAGGAGAGAGACTAATTTCTCTCTCTTTTTTTAATAAAAAT ATGGCGAAATCCATGAGATCGAAGAGAGAGAAGAGACTGCGGGCCATCCGGAGAGACATGGTTGACCCTTTTTACGACAAGAAAGACGCAGCGAAGCTTGCTGCTCAAGAGGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCATCTCCTTTCACTTCCAATATTTCTACTATGGACGTCGCATCAGCCTCTGCTTCTACTAACGCCGACTCTGCCATGGATGTGGAGATGAATGAATATGGTGAAAGCACGACACTGAAGGCTGTAGGTGGAATTGGGAAGAAATCGAAAAGAAAATTCAAGGTTGGCAAGGCCAAGCGCCGGGGTAAGTGCAAGATCAAGAGGAACCGCCACATTTAA MAKSMRSKREKRLRAIRRDMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNISTMDVASASASTNADSAMDVEMNEYGESTTLKAVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI
BLAST of CmaCh03G015050 vs. TrEMBL
Match: A0A0A0KJ42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G538670 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 1.2e-41 Identity = 97/120 (80.83%), Postives = 108/120 (90.00%), Query Frame = 1
BLAST of CmaCh03G015050 vs. TrEMBL
Match: D7T9S3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00940 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 2.1e-25 Identity = 79/124 (63.71%), Postives = 95/124 (76.61%), Query Frame = 1
BLAST of CmaCh03G015050 vs. TrEMBL
Match: A0A067GPI8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033622mg PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.3e-24 Identity = 77/118 (65.25%), Postives = 96/118 (81.36%), Query Frame = 1
BLAST of CmaCh03G015050 vs. TrEMBL
Match: V4U7B5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017227mg PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.1e-24 Identity = 77/118 (65.25%), Postives = 95/118 (80.51%), Query Frame = 1
BLAST of CmaCh03G015050 vs. TrEMBL
Match: M5WJI1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013494mg PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 8.8e-24 Identity = 76/121 (62.81%), Postives = 89/121 (73.55%), Query Frame = 1
BLAST of CmaCh03G015050 vs. TAIR10
Match: AT1G30880.1 (AT1G30880.1 unknown protein) HSP 1 Score: 75.1 bits (183), Expect = 3.3e-14 Identity = 60/123 (48.78%), Postives = 80/123 (65.04%), Query Frame = 1
BLAST of CmaCh03G015050 vs. NCBI nr
Match: gi|659077867|ref|XP_008439430.1| (PREDICTED: uncharacterized protein LOC103484241 [Cucumis melo]) HSP 1 Score: 183.0 bits (463), Expect = 3.2e-43 Identity = 100/120 (83.33%), Postives = 110/120 (91.67%), Query Frame = 1
BLAST of CmaCh03G015050 vs. NCBI nr
Match: gi|449433465|ref|XP_004134518.1| (PREDICTED: uncharacterized protein LOC101221511 [Cucumis sativus]) HSP 1 Score: 177.2 bits (448), Expect = 1.7e-41 Identity = 97/120 (80.83%), Postives = 108/120 (90.00%), Query Frame = 1
BLAST of CmaCh03G015050 vs. NCBI nr
Match: gi|225423559|ref|XP_002272698.1| (PREDICTED: uncharacterized protein LOC100242357 [Vitis vinifera]) HSP 1 Score: 123.2 bits (308), Expect = 3.0e-25 Identity = 79/124 (63.71%), Postives = 95/124 (76.61%), Query Frame = 1
BLAST of CmaCh03G015050 vs. NCBI nr
Match: gi|694425003|ref|XP_009340257.1| (PREDICTED: uncharacterized protein LOC103932397 [Pyrus x bretschneideri]) HSP 1 Score: 123.2 bits (308), Expect = 3.0e-25 Identity = 76/121 (62.81%), Postives = 90/121 (74.38%), Query Frame = 1
BLAST of CmaCh03G015050 vs. NCBI nr
Match: gi|568828512|ref|XP_006468587.1| (PREDICTED: uncharacterized protein LOC102611829 isoform X1 [Citrus sinensis]) HSP 1 Score: 119.8 bits (299), Expect = 3.3e-24 Identity = 77/118 (65.25%), Postives = 96/118 (81.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|