CmoCh06G017390 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G017390
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCmo_Chr06 : 11926032 .. 11928029 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTCCTCCTCTCCACCCCCATTCATCGTCTTCCTCTTACTCAAAAACCTAATCACACATACGATCGCCACCGACTCTTTAATAATCCCCCTCATGTTCGCACCACGACTGCTGAGAAGAATGCTCATTTATGCGTAGCCCACCAACTGTTCGACGATATTCCTATATGGGATACTTTTGCTTGGAACAATCTGATTCAAACCCATCTCACCAGCGGAGATGTGGGGCATGTTATTTCTACTTATCAACAGATGTTGTCTCGAGGGGTTCGCCCCGACAACCACACCCTTCCTCGAGTTATCTGCGCCTCCCGTCACTATGGTGATCTGCAGCTTGGCAAGCAGCTCCATGCTCAAGCCTTCAAACTTGGGCTCTTCTCTAACCTCTATGTATTTACTTCCTTGATTGAGCTGTATGGGATTCTTGACAGTGCGGACACTGCAAGGTGGCTCCATGACAAGTCGGCTTGCAGAAACGCTGTTTCTTGGACCATGTTAGCCAAGCTGTACTTGATGGAAGATAAACCCAGTTTTTCCATAGACTTGTTTTACCAAATGGTGGAGTTGGCGGCTGATATTGATGCAGTGGCATTGGCCACGGCTATTGGTGCCTGTGGTGCACGTAAACTGCTGCAACACGGAAGAAATATCCACCATGTCGCCAGAATTCATGGCTTGGAATTTGATATCTTGGTCAGTAATTGCCTGTTGAAAATGTACCTTGACTGTGGCAGTATCAAAGATGCTAGGGGGTTGTTCAATCGAATGCCGTTCAGAGATATCATTTCGTGGACAGACCTCATCCATTTTTATGTTAAGAATGGTGGAATCAATGAGGCCTTAAAGCTCTTTCGACAGATGAATATGGATGGAGAATTGAAGCCTGATCCTCTCACAATCAGCAGCATTCTCCCAGCCTGTGGAAGAATCACTGCTCATAAGCATGGAAGAGAGATTCACGGATACGTGCTTAAAAATTATTTTGATGACAATCTCATCGTCCAAAATGCTTTAGTTGACATGTATGTCAAATCTGGATGTATCCAATCTGCATTGAAAATTTTCTCGAGGATGAAGGAGAAAGACATGGTTTCTTGGACTGTCGTGATCTCGGGCTACAGCTTACATGGGCAAGGAAAACTTGGAGTGGGTTTGTTCCGTGAGATGGACAGGAACTTTAGTGTGCATAGAGATGAGATCACTTATACTGCAGTTTTGCAGGCTTGTAGTACTGCAAGCATGGTAGAGGAAGGGGATTTTTACTTCAATTGCATTACCGAACCAACCATGGCACACTTTGTTTTAAAGGTGGCTCTTTTAGGCCGGGCAGGACGATTCAATGAAGCAAGAACATTTGTCGATAAACATAAACTCGACAAAAATTTAGAGATTTTGAGAGCATTGCTCGATGGATGCAGGAAGCACCATCAACAGAAACTAGGGAAGCGAATCATTGAGCAGCTGTGTGATTTGGAACCTCTAAATGCCGAGAATTACGTTCTACTTTCAAACTGGTATGCCAGCAACGAAGAATGGGAGATGGTCGAAAAGCTGAGAAAAACTATTAGAGACATGGGATTAAGACCAAAGAAGGCTTACAGTTGGATGGAGTTCCGCAACAAAATCCATGCATTTGGCACAGGGGATGTATCCCACCCAAGATCGCAGGCCATATATTGGAATTTACAGTGCCTGATGAAGAAAATGGAAGAAGATGGTTTCAAGAGGAATACAGATTTCAGATTCCACGACGTGGATGAGGAGCGAGAGTGTGCTCTGATAGGACACAGCGAGCTCTTGGCAATTTCCTTCGGGCTGATTAGTACAGAAGCCGGAAGGACAATTCGTATTGCAAAGAACCTTCGTGTATGCCATAGTTGTCATGAATCCGCGAAGTTCATATCCAACAAGGTTGGACGAGAAATCATAGTAAAAGATCCTTATGTTTTCCATCATTTCAAGGATGGCCGTTGTTCTTGTGAAGATTTTTGTTAG

mRNA sequence

ATGGATCTCCTCCTCTCCACCCCCATTCATCGTCTTCCTCTTACTCAAAAACCTAATCACACATACGATCGCCACCGACTCTTTAATAATCCCCCTCATGTTCGCACCACGACTGCTGAGAAGAATGCTCATTTATGCGTAGCCCACCAACTGTTCGACGATATTCCTATATGGGATACTTTTGCTTGGAACAATCTGATTCAAACCCATCTCACCAGCGGAGATGTGGGGCATGTTATTTCTACTTATCAACAGATGTTGTCTCGAGGGGTTCGCCCCGACAACCACACCCTTCCTCGAGTTATCTGCGCCTCCCGTCACTATGGTGATCTGCAGCTTGGCAAGCAGCTCCATGCTCAAGCCTTCAAACTTGGGCTCTTCTCTAACCTCTATGTATTTACTTCCTTGATTGAGCTGTATGGGATTCTTGACAGTGCGGACACTGCAAGGTGGCTCCATGACAAGTCGGCTTGCAGAAACGCTGTTTCTTGGACCATGTTAGCCAAGCTGTACTTGATGGAAGATAAACCCAGTTTTTCCATAGACTTGTTTTACCAAATGGTGGAGTTGGCGGCTGATATTGATGCAGTGGCATTGGCCACGGCTATTGGTGCCTGTGGTGCACGTAAACTGCTGCAACACGGAAGAAATATCCACCATGTCGCCAGAATTCATGGCTTGGAATTTGATATCTTGGTCAGTAATTGCCTGTTGAAAATGTACCTTGACTGTGGCAGTATCAAAGATGCTAGGGGGTTGTTCAATCGAATGCCGTTCAGAGATATCATTTCGTGGACAGACCTCATCCATTTTTATGTTAAGAATGGTGGAATCAATGAGGCCTTAAAGCTCTTTCGACAGATGAATATGGATGGAGAATTGAAGCCTGATCCTCTCACAATCAGCAGCATTCTCCCAGCCTGTGGAAGAATCACTGCTCATAAGCATGGAAGAGAGATTCACGGATACGTGCTTAAAAATTATTTTGATGACAATCTCATCGTCCAAAATGCTTTAGTTGACATGTATGTCAAATCTGGATGTATCCAATCTGCATTGAAAATTTTCTCGAGGATGAAGGAGAAAGACATGGTTTCTTGGACTGTCGTGATCTCGGGCTACAGCTTACATGGGCAAGGAAAACTTGGAGTGGGTTTGTTCCGTGAGATGGACAGGAACTTTAGTGTGCATAGAGATGAGATCACTTATACTGCAGTTTTGCAGGCTTGTAGTACTGCAAGCATGGTAGAGGAAGGGGATTTTTACTTCAATTGCATTACCGAACCAACCATGGCACACTTTGTTTTAAAGGTGGCTCTTTTAGGCCGGGCAGGACGATTCAATGAAGCAAGAACATTTGTCGATAAACATAAACTCGACAAAAATTTAGAGATTTTGAGAGCATTGCTCGATGGATGCAGGAAGCACCATCAACAGAAACTAGGGAAGCGAATCATTGAGCAGCTGTGTGATTTGGAACCTCTAAATGCCGAGAATTACGTTCTACTTTCAAACTGGTATGCCAGCAACGAAGAATGGGAGATGGTCGAAAAGCTGAGAAAAACTATTAGAGACATGGGATTAAGACCAAAGAAGGCTTACAGTTGGATGGAGTTCCGCAACAAAATCCATGCATTTGGCACAGGGGATGTATCCCACCCAAGATCGCAGGCCATATATTGGAATTTACAGTGCCTGATGAAGAAAATGGAAGAAGATGGTTTCAAGAGGAATACAGATTTCAGATTCCACGACGTGGATGAGGAGCGAGAGTGTGCTCTGATAGGACACAGCGAGCTCTTGGCAATTTCCTTCGGGCTGATTAGTACAGAAGCCGGAAGGACAATTCGTATTGCAAAGAACCTTCGTGTATGCCATAGTTGTCATGAATCCGCGAAGTTCATATCCAACAAGGTTGGACGAGAAATCATAGTAAAAGATCCTTATGTTTTCCATCATTTCAAGGATGGCCGTTGTTCTTGTGAAGATTTTTGTTAG

Coding sequence (CDS)

ATGGATCTCCTCCTCTCCACCCCCATTCATCGTCTTCCTCTTACTCAAAAACCTAATCACACATACGATCGCCACCGACTCTTTAATAATCCCCCTCATGTTCGCACCACGACTGCTGAGAAGAATGCTCATTTATGCGTAGCCCACCAACTGTTCGACGATATTCCTATATGGGATACTTTTGCTTGGAACAATCTGATTCAAACCCATCTCACCAGCGGAGATGTGGGGCATGTTATTTCTACTTATCAACAGATGTTGTCTCGAGGGGTTCGCCCCGACAACCACACCCTTCCTCGAGTTATCTGCGCCTCCCGTCACTATGGTGATCTGCAGCTTGGCAAGCAGCTCCATGCTCAAGCCTTCAAACTTGGGCTCTTCTCTAACCTCTATGTATTTACTTCCTTGATTGAGCTGTATGGGATTCTTGACAGTGCGGACACTGCAAGGTGGCTCCATGACAAGTCGGCTTGCAGAAACGCTGTTTCTTGGACCATGTTAGCCAAGCTGTACTTGATGGAAGATAAACCCAGTTTTTCCATAGACTTGTTTTACCAAATGGTGGAGTTGGCGGCTGATATTGATGCAGTGGCATTGGCCACGGCTATTGGTGCCTGTGGTGCACGTAAACTGCTGCAACACGGAAGAAATATCCACCATGTCGCCAGAATTCATGGCTTGGAATTTGATATCTTGGTCAGTAATTGCCTGTTGAAAATGTACCTTGACTGTGGCAGTATCAAAGATGCTAGGGGGTTGTTCAATCGAATGCCGTTCAGAGATATCATTTCGTGGACAGACCTCATCCATTTTTATGTTAAGAATGGTGGAATCAATGAGGCCTTAAAGCTCTTTCGACAGATGAATATGGATGGAGAATTGAAGCCTGATCCTCTCACAATCAGCAGCATTCTCCCAGCCTGTGGAAGAATCACTGCTCATAAGCATGGAAGAGAGATTCACGGATACGTGCTTAAAAATTATTTTGATGACAATCTCATCGTCCAAAATGCTTTAGTTGACATGTATGTCAAATCTGGATGTATCCAATCTGCATTGAAAATTTTCTCGAGGATGAAGGAGAAAGACATGGTTTCTTGGACTGTCGTGATCTCGGGCTACAGCTTACATGGGCAAGGAAAACTTGGAGTGGGTTTGTTCCGTGAGATGGACAGGAACTTTAGTGTGCATAGAGATGAGATCACTTATACTGCAGTTTTGCAGGCTTGTAGTACTGCAAGCATGGTAGAGGAAGGGGATTTTTACTTCAATTGCATTACCGAACCAACCATGGCACACTTTGTTTTAAAGGTGGCTCTTTTAGGCCGGGCAGGACGATTCAATGAAGCAAGAACATTTGTCGATAAACATAAACTCGACAAAAATTTAGAGATTTTGAGAGCATTGCTCGATGGATGCAGGAAGCACCATCAACAGAAACTAGGGAAGCGAATCATTGAGCAGCTGTGTGATTTGGAACCTCTAAATGCCGAGAATTACGTTCTACTTTCAAACTGGTATGCCAGCAACGAAGAATGGGAGATGGTCGAAAAGCTGAGAAAAACTATTAGAGACATGGGATTAAGACCAAAGAAGGCTTACAGTTGGATGGAGTTCCGCAACAAAATCCATGCATTTGGCACAGGGGATGTATCCCACCCAAGATCGCAGGCCATATATTGGAATTTACAGTGCCTGATGAAGAAAATGGAAGAAGATGGTTTCAAGAGGAATACAGATTTCAGATTCCACGACGTGGATGAGGAGCGAGAGTGTGCTCTGATAGGACACAGCGAGCTCTTGGCAATTTCCTTCGGGCTGATTAGTACAGAAGCCGGAAGGACAATTCGTATTGCAAAGAACCTTCGTGTATGCCATAGTTGTCATGAATCCGCGAAGTTCATATCCAACAAGGTTGGACGAGAAATCATAGTAAAAGATCCTTATGTTTTCCATCATTTCAAGGATGGCCGTTGTTCTTGTGAAGATTTTTGTTAG
Homology
[Close]
BLAST of CmoCh06G017390 vs. Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.1e-124
Identity = 233/630 (36.98%), Postives = 359/630 (56.98%), Query Frame = 1 

Query: 41  KNAHLCVAHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPR 100
           KN  +  A ++FD++   D  +WN++I  ++++G     +S + QML  G+  D  T+  
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301

Query: 101 VICASRHYGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRN 160
           V         + LG+ +H+   K           +L+++Y      D+A+ +  + + R+
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361

Query: 161 AVSWTMLAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHH 220
            VS+T +   Y  E     ++ LF +M E     D   +   +  C   +LL  G+ +H 
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421

Query: 221 VARIHGLEFDILVSNCLLKMYLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINE 280
             + + L FDI VSN L+ MY  CGS+++A  +F+ M  +DIISW  +I  Y KN   NE
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481

Query: 281 ALKLFRQMNMDGELKPDPLTISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALV 340
           AL LF  +  +    PD  T++ +LPAC  ++A   GREIHGY+++N +  +  V N+LV
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541

Query: 341 DMYVKSGCIQSALKIFSRMKEKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDE 400
           DMY K G +  A  +F  +  KD+VSWTV+I+GY +HG GK  + LF +M R   +  DE
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADE 601

Query: 401 ITYTAVLQACSTASMVEEGDFYFN-----CITEPTMAHFVLKVALLGRAGRFNEARTFVD 460
           I++ ++L ACS + +V+EG  +FN     C  EPT+ H+   V +L R G   +A  F++
Sbjct: 602 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 661

Query: 461 KHKLDKNLEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEM 520
              +  +  I  ALL GCR HH  KL +++ E++ +LEP N   YVL++N YA  E+WE 
Sbjct: 662 NMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQ 721

Query: 521 VEKLRKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGF 580
           V++LRK I   GLR     SW+E + +++ F  GD S+P ++ I   L+ +  +M E+G+
Sbjct: 722 VKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGY 781

Query: 581 KRNTDFRFHDVDE-ERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKF 640
              T +   D +E E+E AL GHSE LA++ G+IS+  G+ IR+ KNLRVC  CHE AKF
Sbjct: 782 SPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKF 841

Query: 641 ISNKVGREIIVKDPYVFHHFKDGRCSCEDF 665
           +S    REI+++D   FH FKDG CSC  F
Sbjct: 842 MSKLTRREIVLRDSNRFHQFKDGHCSCRGF 870

[Close]
BLAST of CmoCh06G017390 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 2.6e-118
Identity = 222/626 (35.46%), Postives = 358/626 (57.19%), Query Frame = 1 

Query: 48  AHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRH 107
           A Q+FDD+P    F WN +I+ +  +      +  Y  M    V PD+ T P ++ A   
Sbjct: 72  ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 108 YGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSAC--RNAVSWT 167
              LQ+G+ +HAQ F+LG  ++++V   LI LY       +AR + +      R  VSWT
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191

Query: 168 MLAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIH 227
            +   Y    +P  ++++F QM ++    D VAL + + A    + L+ GR+IH      
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251

Query: 228 GLEF--DILVSNCLLKMYLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALK 287
           GLE   D+L+S  L  MY  CG +  A+ LF++M   ++I W  +I  Y KNG   EA+ 
Sbjct: 252 GLEIEPDLLIS--LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 311

Query: 288 LFRQMNMDGELKPDPLTISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMY 347
           +F +M ++ +++PD ++I+S + AC ++ + +  R ++ YV ++ + D++ + +AL+DM+
Sbjct: 312 MFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 371

Query: 348 VKSGCIQSALKIFSRMKEKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITY 407
            K G ++ A  +F R  ++D+V W+ +I GY LHG+ +  + L+R M+R   VH +++T+
Sbjct: 372 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHPNDVTF 431

Query: 408 TAVLQACSTASMVEEGDFYFNCITE----PTMAHFVLKVALLGRAGRFNEARTFVDKHKL 467
             +L AC+ + MV EG ++FN + +    P   H+   + LLGRAG  ++A   +    +
Sbjct: 432 LGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 491

Query: 468 DKNLEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKL 527
              + +  ALL  C+KH   +LG+   +QL  ++P N  +YV LSN YA+   W+ V ++
Sbjct: 492 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 551

Query: 528 RKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNT 587
           R  +++ GL      SW+E R ++ AF  GD SHPR + I   ++ +  +++E GF  N 
Sbjct: 552 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 611

Query: 588 DFRFHDV-DEERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNK 647
           D   HD+ DEE E  L  HSE +AI++GLIST  G  +RI KNLR C +CH + K IS  
Sbjct: 612 DASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKL 671

Query: 648 VGREIIVKDPYVFHHFKDGRCSCEDF 665
           V REI+V+D   FHHFKDG CSC D+
Sbjct: 672 VDREIVVRDTNRFHHFKDGVCSCGDY 693

[Close]
BLAST of CmoCh06G017390 vs. Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.0e-111
Identity = 223/656 (33.99%), Postives = 346/656 (52.74%), Query Frame = 1 

Query: 51  LFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGD 110
           LF  +      AW ++I+           ++++ +M + G  PD++  P V+ +     D
Sbjct: 61  LFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMD 120

Query: 111 LQLGKQLHAQAFKLGLFSNLYVFTSLIELYGIL--------------------------- 170
           L+ G+ +H    +LG+  +LY   +L+ +Y  L                           
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180

Query: 171 ---------DSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFSIDLFYQMVELAADI 230
                       D+ R + +    ++ VS+  +   Y        ++ +  +M       
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240

Query: 231 DAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKMYLDCGSIKDARGLF 290
           D+  L++ +        +  G+ IH      G++ D+ + + L+ MY     I+D+  +F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300

Query: 291 NRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLTISSILPACGRITAH 350
           +R+  RD ISW  L+  YV+NG  NEAL+LFRQM +  ++KP  +  SS++PAC  +   
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATL 360

Query: 351 KHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMKEKDMVSWTVVISGY 410
             G+++HGYVL+  F  N+ + +ALVDMY K G I++A KIF RM   D VSWT +I G+
Sbjct: 361 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 420

Query: 411 SLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGDFYFNCITE-----P 470
           +LHG G   V LF EM R   V  +++ + AVL ACS   +V+E   YFN +T+      
Sbjct: 421 ALHGHGHEAVSLFEEMKRQ-GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 480

Query: 471 TMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQKLGKRIIEQL 530
            + H+     LLGRAG+  EA  F+ K  ++    +   LL  C  H   +L +++ E++
Sbjct: 481 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 540

Query: 531 CDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFRNKIHAFGTG 590
             ++  N   YVL+ N YASN  W+ + KLR  +R  GLR K A SW+E +NK H F +G
Sbjct: 541 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSG 600

Query: 591 DVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALI-GHSELLAISFGLI 650
           D SHP    I   L+ +M++ME++G+  +T    HDVDEE +  L+ GHSE LA++FG+I
Sbjct: 601 DRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGII 660

Query: 651 STEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCSCEDF 665
           +TE G TIR+ KN+R+C  CH + KFIS    REIIV+D   FHHF  G CSC D+
Sbjct: 661 NTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDY 714

[Close]
BLAST of CmoCh06G017390 vs. Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 386.0 bits (990), Expect = 8.6e-106
Identity = 223/626 (35.62%), Postives = 337/626 (53.83%), Query Frame = 1 

Query: 48  AHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRP-DNHTLPRVICASR 107
           A  LFD++P+ D  +WN +I  +  SG+    ++     LS G+R  D+ T+  ++ A  
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACT 263

Query: 108 HYGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTM 167
             GD   G  +H+ + K GL S L+V   LI+LY         + + D+   R+ +SW  
Sbjct: 264 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 323

Query: 168 LAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHG 227
           + K Y + ++P  +I LF +M       D + L +          ++  R++       G
Sbjct: 324 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 383

Query: 228 --LEFDILVSNCLLKMYLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKL 287
             LE DI + N ++ MY   G +  AR +FN +P  D+ISW  +I  Y +NG  +EA+++
Sbjct: 384 WFLE-DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEM 443

Query: 288 FRQMNMDGELKPDPLTISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYV 347
           +  M  +GE+  +  T  S+LPAC +  A + G ++HG +LKN    ++ V  +L DMY 
Sbjct: 444 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYG 503

Query: 348 KSGCIQSALKIFSRMKEKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYT 407
           K G ++ AL +F ++   + V W  +I+ +  HG G+  V LF+EM  +  V  D IT+ 
Sbjct: 504 KCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM-LDEGVKPDHITFV 563

Query: 408 AVLQACSTASMVEEGDFYFNCI-----TEPTMAHFVLKVALLGRAGRFNEARTFVDKHKL 467
            +L ACS + +V+EG + F  +       P++ H+   V + GRAG+   A  F+    L
Sbjct: 564 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 623

Query: 468 DKNLEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKL 527
             +  I  ALL  CR H    LGK   E L ++EP +   +VLLSN YAS  +WE V+++
Sbjct: 624 QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 683

Query: 528 RKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNT 587
           R      GLR    +S ME  NK+  F TG+ +HP  + +Y  L  L  K++  G+  + 
Sbjct: 684 RSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDH 743

Query: 588 DFRFHDV-DEERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNK 647
            F   DV D+E+E  L+ HSE LAI+F LI+T A  TIRI KNLRVC  CH   KFIS  
Sbjct: 744 RFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKI 803

Query: 648 VGREIIVKDPYVFHHFKDGRCSCEDF 665
             REIIV+D   FHHFK+G CSC D+
Sbjct: 804 TEREIIVRDSNRFHHFKNGVCSCGDY 822

[Close]
BLAST of CmoCh06G017390 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 7.3e-105
Identity = 219/661 (33.13%), Postives = 352/661 (53.25%), Query Frame = 1 

Query: 43  AHLCVAHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRG-VRPDNHTLPRV 102
           A L  A ++FD+IP  ++FAWN LI+ + +  D    I  +  M+S     P+ +T P +
Sbjct: 78  ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137

Query: 103 ICASRHYGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNA 162
           I A+     L LG+ LH  A K  + S+++V  SLI  Y      D+A  +      ++ 
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197

Query: 163 VSWTMLAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHV 222
           VSW  +   ++ +  P  +++LF +M         V +   + AC   + L+ GR +   
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257

Query: 223 ARIHGLEFDILVSNCLLKMYLDCGSIKDARGLF--------------------------- 282
              + +  ++ ++N +L MY  CGSI+DA+ LF                           
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317

Query: 283 ----NRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLTISSILPACGR 342
               N MP +DI++W  LI  Y +NG  NEAL +F ++ +   +K + +T+ S L AC +
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377

Query: 343 ITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMKEKDMVSWTVV 402
           + A + GR IH Y+ K+    N  V +AL+ MY K G ++ + ++F+ ++++D+  W+ +
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437

Query: 403 ISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGDFYFNCITE-- 462
           I G ++HG G   V +F +M +  +V  + +T+T V  ACS   +V+E +  F+ +    
Sbjct: 438 IGGLAMHGCGNEAVDMFYKM-QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 497

Query: 463 ---PTMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQKLGKRI 522
              P   H+   V +LGR+G   +A  F++   +  +  +  ALL  C+ H    L +  
Sbjct: 498 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 557

Query: 523 IEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFRNKIHA 582
             +L +LEP N   +VLLSN YA   +WE V +LRK +R  GL+ +   S +E    IH 
Sbjct: 558 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 617

Query: 583 FGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEE--RECALIGHSELLAI 642
           F +GD +HP S+ +Y  L  +M+K++ +G++         ++EE  +E +L  HSE LAI
Sbjct: 618 FLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 677

Query: 643 SFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCSCED 665
            +GLISTEA + IR+ KNLRVC  CH  AK IS    REIIV+D Y FHHF++G+CSC D
Sbjct: 678 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 737

[Close]
BLAST of CmoCh06G017390 vs. TrEMBL
Match: A0A0A0L9N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G722890 PE=4 SV=1)

HSP 1 Score: 1073.9 bits (2776), Expect = 7.2e-311
Identity = 518/659 (78.60%), Postives = 571/659 (86.65%), Query Frame = 1 

Query: 1   MDLLLSTPIHRLPLTQKPNHTYDRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           M+LLLST  H LP+TQKPNH Y RH  FNN PHVRT T E  A+LCVAHQ+FDDIPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLT+GD+GHVISTY+QML RGVRPD HTLPR+ICA+R YGDLQ+GKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLG  SNLYV TSLIELYGILDSADTA+WLHDKS CRN+VSWT+LAKLYL EDKPS +
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKM 240
           +DLFYQMVELA DIDAVALATAIGACGA K+L HGRNIHH+AR+HGLEF+ILVSN LLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240

Query: 241 YLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           Y+DC SIKDARG F++MP +DIISWT+LIH YVK GGINEA KLFRQMNMDGELKPDP T
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300

Query: 301 ISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGR+ AHKHG+EIHGYV+KN FD+NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGD 420
           EKDMVSW+++  GYSLHGQGKLGV LFREM++NF + RDEITYTAVL AC+TA+MV+EGD
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQK 480
            YF+CIT+PT+AH  LKVALL RAGR +EARTFV+K KLDK+ EILRALLDGCR H QQK
Sbjct: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLNAENY+LLSNWYA NE+W+MVEKLR+TIRDMGLRPKKAYSW+EF 
Sbjct: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIH FGTGDVSHPRSQ IYWNLQCLMK+MEEDG K N DF  HDVDEEREC  IGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRC 660
           LAISFGLISTEAGRTIRI KNLR+  +                +VK    F +F DGRC
Sbjct: 601 LAISFGLISTEAGRTIRITKNLRMVAA----------------LVK---TFVNFIDGRC 640

[Close]
BLAST of CmoCh06G017390 vs. TrEMBL
Match: M5XS66_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020455mg PE=4 SV=1)

HSP 1 Score: 824.7 bits (2129), Expect = 8.0e-236
Identity = 405/664 (60.99%), Postives = 498/664 (75.00%), Query Frame = 1 

Query: 1   MDLLLSTPIHRLPLTQKPNHTYDRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           M++L S  I RL +T+KP  T      + +P + +T+T      + V  +L + +P  DT
Sbjct: 1   MEVLASAQIQRLIVTEKPIDTAQ----YKHPRNSKTST-----RVAVTRKLLEKMPHSDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWN LIQTH+ +    + +STY QML RGVRPD HTLPR++ ASR   DL LGKQLH  
Sbjct: 61  FAWNKLIQTHIANAHFDNALSTYHQMLLRGVRPDRHTLPRILSASRLSVDLPLGKQLHGH 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           A KLG   + YV  +LIELYG L S D A+ L DKS  +++VSWTMLA+LY+ME KP  +
Sbjct: 121 ALKLGCSDDRYVVAALIELYGRLHSVDAAKGLFDKSPVKDSVSWTMLARLYIMEGKPGMA 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKM 240
           + +F  MVE  A ID VALATA GACG  K +  G+ +H VA+  GLEFD+LVSN LLKM
Sbjct: 181 LHVFDGMVESGAQIDPVALATAAGACGMLKSVIDGKKVHRVAKERGLEFDVLVSNTLLKM 240

Query: 241 YLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           Y+DCG + DA  +F++MP +D+ISWT +IH  VK GG NE LKLFRQM  DG  KPD L+
Sbjct: 241 YMDCGCVDDAWSVFDQMPSKDVISWTGMIHANVKRGGFNEGLKLFRQMIADGA-KPDSLS 300

Query: 301 ISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           +SS+LPAC R++A K G+EIHGY+++N    NL V NAL+DMYVKSG I+SA KIF+ +K
Sbjct: 301 VSSVLPACARMSASKQGKEIHGYLIRNGIRMNLTVLNALMDMYVKSGFIESASKIFAGLK 360

Query: 361 EKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGD 420
           +KD+VSWTV+I GYSLHGQG+LGV LFR+M+ + S+  DE TY AVL+AC  A MVEEG 
Sbjct: 361 DKDVVSWTVMILGYSLHGQGQLGVNLFRQMEDS-SIQIDEFTYAAVLRACVAALMVEEGK 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQK 480
           FYFNCI  P +AH VL V LL R G F++A+ F+   K++ + E+LRALLDGCR H Q K
Sbjct: 421 FYFNCIKTPAVAHSVLLVTLLSRYGLFDDAKNFIADKKIEGDAEVLRALLDGCRIHQQSK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKR+IEQLCDLEPLNA+NYVLLSNWYA   +W+MVE LR TI DMGL+ KKAY+WME R
Sbjct: 481 LGKRVIEQLCDLEPLNADNYVLLSNWYAHYAKWDMVEGLRGTIIDMGLKTKKAYTWMELR 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NK+H FGTGDVSHPRSQ IYW LQ LM+KME++G +R++DF FHDVDEEREC  IGHSE+
Sbjct: 541 NKVHVFGTGDVSHPRSQGIYWELQGLMQKMEDEGHRRDSDFSFHDVDEERECIPIGHSEM 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCS 660
           LAISFGLIST+AG TIR+ KNLRVC +CH+SAK IS  VGREII+KDP  FHHFKDG CS
Sbjct: 601 LAISFGLISTQAGSTIRVTKNLRVCRNCHDSAKIISQMVGREIILKDPNCFHHFKDGYCS 653

Query: 661 CEDF 665
           C DF
Sbjct: 661 CGDF 653

[Close]
BLAST of CmoCh06G017390 vs. TrEMBL
Match: A5AJ01_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011875 PE=4 SV=1)

HSP 1 Score: 824.3 bits (2128), Expect = 1.1e-235
Identity = 398/667 (59.67%), Postives = 502/667 (75.26%), Query Frame = 1 

Query: 1   MDLLLSTPIHRLPLTQKP-NHTYDRHRLFNNPPHVRTTT--AEKNAHLCVAHQLFDDIPI 60
           MD+L ST    + + QK  N T+ +     NP ++R+    ++K+    + HQLFD+IP+
Sbjct: 96  MDVLSSTQSQSIFVKQKSTNATHCK-----NPSNLRSXVRMSQKSIDFGLTHQLFDEIPV 155

Query: 61  WDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQL 120
            +TFAWNNLIQTHLT+GD G V+STY+QML RGVRPD HT+PR++ A+RH      GKQ+
Sbjct: 156 SNTFAWNNLIQTHLTNGDSGRVVSTYRQMLLRGVRPDKHTIPRILTAARHTSSFSFGKQV 215

Query: 121 HAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKP 180
           H  A KLGL S  YV ++L+E+YG LD A+ A+ +  KSA RN+VSWT++++LY+MEDKP
Sbjct: 216 HGHALKLGLSSESYVISALLEMYGRLDGABAAKLVFCKSARRNSVSWTLISRLYIMEDKP 275

Query: 181 SFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCL 240
             ++D+F QMVE  ++ID +AL TAI ACG  K L  G                      
Sbjct: 276 GLAVDMFKQMVESKSEIDPLALVTAIVACGMLKSLPGG---------------------- 335

Query: 241 LKMYLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPD 300
            +MY+DCGSIKDAR +F+RMP +D+ISWT++   YVKNGG NE LKLFRQM+M+G +KPD
Sbjct: 336 -EMYIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEG-VKPD 395

Query: 301 PLTISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFS 360
            L ISSILPACGR  AHK G+EIH Y+L+N  D N+ VQNA++DMYVKSG I+SA KIF+
Sbjct: 396 SLAISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIFA 455

Query: 361 RMKEKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVE 420
            MK++D +SWTV+I GYSLHGQG+LGV LFR+M++N SV  D+I Y A L AC+TA +VE
Sbjct: 456 GMKDRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVE 515

Query: 421 EGDFYFNCITEPTMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHH 480
           +G FYFNCIT P   H+ L VALL R G F+EAR F+++HKL+ ++E+LRALLDGCR HH
Sbjct: 516 QGRFYFNCITAPKSRHYALMVALLSRVGLFDEARVFMEEHKLEGHVEVLRALLDGCRIHH 575

Query: 481 QQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWM 540
             +  KR+IEQLCDL+ LNA+NYVLLSNWY+S  +W+MV +LR+TIRDMGL+P+KAYSW+
Sbjct: 576 NMRTAKRVIEQLCDLQTLNADNYVLLSNWYSSFAKWDMVNELRETIRDMGLKPRKAYSWI 635

Query: 541 EFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGH 600
           EFRNKIH FGTGDVSHPRS+ IYW L  LMKK+EE+G + N DF  HDVDEEREC  IGH
Sbjct: 636 EFRNKIHVFGTGDVSHPRSEKIYWELHSLMKKIEEEGTRLNLDFSLHDVDEERECVPIGH 695

Query: 601 SELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDG 660
           SELLA SFGLIST+AG TIR+ KNLR+C +CH+SAK IS  V REII+KDP  FHHFKDG
Sbjct: 696 SELLATSFGLISTQAGATIRVTKNLRMCGNCHDSAKAISKIVEREIIIKDPSCFHHFKDG 733

Query: 661 RCSCEDF 665
            CSC DF
Sbjct: 756 FCSCGDF 733

[Close]
BLAST of CmoCh06G017390 vs. TrEMBL
Match: W9RUH8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009366 PE=4 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 9.9e-226
Identity = 384/629 (61.05%), Postives = 481/629 (76.47%), Query Frame = 1 

Query: 39  AEKNAHLCVAHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTL 98
           A K+A L  AH++FD++ + DTFAWN+LIQ++LTS D+ HV+ TYQQML RGV PD HTL
Sbjct: 48  ALKSADLSPAHKMFDEMSLSDTFAWNSLIQSYLTSRDLHHVLFTYQQMLRRGVCPDRHTL 107

Query: 99  PRVICA-SRHYGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLH-DKS 158
           PRV+ A S   G L +GKQ+H  A KLG   + YV ++L+E+YG LD  D A+ L  DKS
Sbjct: 108 PRVLAAVSGLSGGLFVGKQVHGHAIKLGFSHDQYVISALLEMYGKLDDIDRAKCLILDKS 167

Query: 159 ACRNAVSWTMLAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGR 218
              NAVSWT+LA+LY+ E KPS +IDLFYQM++  A+ID+VALATAI A    K L+ GR
Sbjct: 168 PRTNAVSWTLLARLYIREGKPSLAIDLFYQMLDSGAEIDSVALATAISAAAMLKSLKDGR 227

Query: 219 NIHHVARIHGLEFDILVSNCLLKMYLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNG 278
            +H +AR  GLEF +LVSN LLKMY+DCGSI+DAR  F+RMP RDIISWT++IH YVK G
Sbjct: 228 ILHQIARQRGLEFKVLVSNSLLKMYIDCGSIQDARAGFDRMPSRDIISWTEIIHAYVKKG 287

Query: 279 GINEALKLFRQMNMDGELKPDPLTISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQ 338
           G +E LKLFR+M  +G LKPDP +ISSILPAC R+TA+K G+EIHGY+L+N  D NL V 
Sbjct: 288 GYSEGLKLFRRMITNG-LKPDPFSISSILPACARVTANKQGKEIHGYLLRNRIDMNLTVL 347

Query: 339 NALVDMYVKSGCIQSALKIFSRMKEKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSV 398
           NAL+DMY KSGCI+ A ++F+++K KD++SWTV+I GYSLHG+G L V L RE++   S 
Sbjct: 348 NALIDMYAKSGCIELASRMFAQLKHKDVISWTVMILGYSLHGRGDLAVDLCRELENELSA 407

Query: 399 HR-DEITYTAVLQACSTASMVEEGDFYFNCITEPTMAHFVLKVALLGRAGRFNEARTFVD 458
            R D++ Y  VL+ACS+A  +EEG FYFN I  P +AH+ L V LL  A  F+EA  F+ 
Sbjct: 408 VRLDQLRYADVLRACSSARKIEEGKFYFNRIKAPEVAHYALMVGLLANAALFDEAMLFIQ 467

Query: 459 KHKLDKNLEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEM 518
           ++K++++ E+LRALLDGCR H +  LGKR+ EQL +LEPLNAENYVLLSNWYA N +W++
Sbjct: 468 ENKIERHAEVLRALLDGCRIHRRTDLGKRVAEQLSELEPLNAENYVLLSNWYAHNGKWDL 527

Query: 519 VEKLRKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGF 578
           V K+R  I  M L+PKKAYSW+E RNK+H F TGDVSHPRSQ IYW L+CLMKKMEE+G 
Sbjct: 528 VNKMRGMIGGMDLKPKKAYSWIESRNKVHVFRTGDVSHPRSQGIYWELECLMKKMEEEGQ 587

Query: 579 KRNTDFRFHDVDEERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFI 638
           K N D+  HDVDEER+C  +GHSE+LAISFGLIS++   T+R+ KN RVC  CHESAK I
Sbjct: 588 KPNADYSLHDVDEERDCIGVGHSEMLAISFGLISSKGSATVRVTKNHRVCRFCHESAKAI 647

Query: 639 SNKVGREIIVKDPYVFHHFKDGRCSCEDF 665
           SN VGREII+KDP  FHHF+DG CSC DF
Sbjct: 648 SNIVGREIILKDPNRFHHFRDGLCSCGDF 675

[Close]
BLAST of CmoCh06G017390 vs. TrEMBL
Match: A0A061DP49_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_003517 PE=4 SV=1)

HSP 1 Score: 776.5 bits (2004), Expect = 2.5e-221
Identity = 378/647 (58.42%), Postives = 475/647 (73.42%), Query Frame = 1 

Query: 23  DRHRLFNNP----PHVRTTTAEKNAHLCVAHQLFDDIPIW--DTFAWNNLIQTHLTSGDV 82
           D H  FN P    P  R +       L + HQL  +IP+   +TFAWN LIQTHL++  +
Sbjct: 9   DIHIPFNKPKCEHPPCRVSATLNLNKLALTHQLVLEIPLSTSNTFAWNQLIQTHLSNKQL 68

Query: 83  GHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQAFKLGLFSNLYVFTSL 142
             V+S Y  M+ RGVRPD HTLPRV+ ASR   +L  GKQ+HA AFKLG  S+LYV T+L
Sbjct: 69  QQVLSVYHGMMLRGVRPDKHTLPRVLTASRLCTNLAFGKQVHAHAFKLGFSSDLYVITAL 128

Query: 143 IELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFSIDLFYQMVELAADIDA 202
           +E+YG L   D A+W+ D +   N+V+WT+LAKL+L+++KP  + ++F QM+ L ADID 
Sbjct: 129 MEMYGRLHGVDAAKWVLDNAPTTNSVAWTILAKLHLIDNKPHLAFEIFDQMLRLKADIDP 188

Query: 203 VALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKMYLDCGSIKDARGLFNR 262
           V LATAIGAC   K LQ  RN H +AR  G EF +L+ N LLKMY+DC S+++AR  F+ 
Sbjct: 189 VGLATAIGACSLLKSLQQARNAHQIARDCGFEFHLLIGNSLLKMYIDCDSLEEARSFFDA 248

Query: 263 MPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLTISSILPACGRITAHKH 322
           MP +D+ISWT++I  YVK GG NE LKLFR+M   G +KPD LTISSILPAC R+ AHK 
Sbjct: 249 MPSKDVISWTEMIRGYVKKGGYNEGLKLFRRMIRAG-IKPDSLTISSILPACARVPAHKQ 308

Query: 323 GREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMKEKDMVSWTVVISGYSL 382
           G+E+H Y+ +N  D NL VQNA++DMYVKSG I+ A  +F  M E+D+VSWT++I GYSL
Sbjct: 309 GKELHAYLFRNGIDLNLTVQNAIMDMYVKSGFIELASTVFMCMMERDIVSWTIMILGYSL 368

Query: 383 HGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGDFYFNCITEPTMAHFVL 442
           HGQG  G+ LF EM++  S+  DE TY AVL AC TA  V+ G FYFN I  PT+ H  L
Sbjct: 369 HGQGGRGLDLFFEMEKESSLEIDEFTYAAVLHACVTACRVDVGMFYFNRIQAPTVIHCAL 428

Query: 443 KVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLN 502
            VALL RAG FNEA  F+++H++  + E+LRALLDGCR H Q K+GK+I+EQLC+LEPLN
Sbjct: 429 MVALLARAGLFNEAWAFIEEHQIVNDAEVLRALLDGCRIHQQLKIGKQIVEQLCELEPLN 488

Query: 503 AENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRS 562
           AENYVLLSNWYA N +W+MV+KL+ TIRDMGL+PK+AYSW+EFRNKIH FGTGDVSHPRS
Sbjct: 489 AENYVLLSNWYADNAKWDMVDKLKITIRDMGLKPKRAYSWIEFRNKIHVFGTGDVSHPRS 548

Query: 563 QAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSELLAISFGLISTEAGRTI 622
           + +Y  LQ LMKKME++G + ++ F  HDVDEEREC  IGHSE+LAISFGLIST+   TI
Sbjct: 549 EIVYCQLQHLMKKMEDEGRRPSSVFSLHDVDEERECIHIGHSEMLAISFGLISTQGRETI 608

Query: 623 RIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCSCED 664
           R+ KNLRVC SCH++AK IS  V R+II+KDP  FHH +DG C C D
Sbjct: 609 RVTKNLRVCRSCHDTAKVISKIVERKIIIKDPNCFHHIQDGVCLCGD 654

[Close]
BLAST of CmoCh06G017390 vs. TAIR10
Match: AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 448.7 bits (1153), Expect = 6.1e-126
Identity = 233/630 (36.98%), Postives = 359/630 (56.98%), Query Frame = 1 

Query: 41  KNAHLCVAHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPR 100
           KN  +  A ++FD++   D  +WN++I  ++++G     +S + QML  G+  D  T+  
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301

Query: 101 VICASRHYGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRN 160
           V         + LG+ +H+   K           +L+++Y      D+A+ +  + + R+
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361

Query: 161 AVSWTMLAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHH 220
            VS+T +   Y  E     ++ LF +M E     D   +   +  C   +LL  G+ +H 
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421

Query: 221 VARIHGLEFDILVSNCLLKMYLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINE 280
             + + L FDI VSN L+ MY  CGS+++A  +F+ M  +DIISW  +I  Y KN   NE
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481

Query: 281 ALKLFRQMNMDGELKPDPLTISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALV 340
           AL LF  +  +    PD  T++ +LPAC  ++A   GREIHGY+++N +  +  V N+LV
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541

Query: 341 DMYVKSGCIQSALKIFSRMKEKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDE 400
           DMY K G +  A  +F  +  KD+VSWTV+I+GY +HG GK  + LF +M R   +  DE
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADE 601

Query: 401 ITYTAVLQACSTASMVEEGDFYFN-----CITEPTMAHFVLKVALLGRAGRFNEARTFVD 460
           I++ ++L ACS + +V+EG  +FN     C  EPT+ H+   V +L R G   +A  F++
Sbjct: 602 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 661

Query: 461 KHKLDKNLEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEM 520
              +  +  I  ALL GCR HH  KL +++ E++ +LEP N   YVL++N YA  E+WE 
Sbjct: 662 NMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQ 721

Query: 521 VEKLRKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGF 580
           V++LRK I   GLR     SW+E + +++ F  GD S+P ++ I   L+ +  +M E+G+
Sbjct: 722 VKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGY 781

Query: 581 KRNTDFRFHDVDE-ERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKF 640
              T +   D +E E+E AL GHSE LA++ G+IS+  G+ IR+ KNLRVC  CHE AKF
Sbjct: 782 SPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKF 841

Query: 641 ISNKVGREIIVKDPYVFHHFKDGRCSCEDF 665
           +S    REI+++D   FH FKDG CSC  F
Sbjct: 842 MSKLTRREIVLRDSNRFHQFKDGHCSCRGF 870

[Close]
BLAST of CmoCh06G017390 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)

HSP 1 Score: 427.6 bits (1098), Expect = 1.4e-119
Identity = 222/626 (35.46%), Postives = 358/626 (57.19%), Query Frame = 1 

Query: 48  AHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRH 107
           A Q+FDD+P    F WN +I+ +  +      +  Y  M    V PD+ T P ++ A   
Sbjct: 72  ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 108 YGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSAC--RNAVSWT 167
              LQ+G+ +HAQ F+LG  ++++V   LI LY       +AR + +      R  VSWT
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191

Query: 168 MLAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIH 227
            +   Y    +P  ++++F QM ++    D VAL + + A    + L+ GR+IH      
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251

Query: 228 GLEF--DILVSNCLLKMYLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALK 287
           GLE   D+L+S  L  MY  CG +  A+ LF++M   ++I W  +I  Y KNG   EA+ 
Sbjct: 252 GLEIEPDLLIS--LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 311

Query: 288 LFRQMNMDGELKPDPLTISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMY 347
           +F +M ++ +++PD ++I+S + AC ++ + +  R ++ YV ++ + D++ + +AL+DM+
Sbjct: 312 MFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 371

Query: 348 VKSGCIQSALKIFSRMKEKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITY 407
            K G ++ A  +F R  ++D+V W+ +I GY LHG+ +  + L+R M+R   VH +++T+
Sbjct: 372 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHPNDVTF 431

Query: 408 TAVLQACSTASMVEEGDFYFNCITE----PTMAHFVLKVALLGRAGRFNEARTFVDKHKL 467
             +L AC+ + MV EG ++FN + +    P   H+   + LLGRAG  ++A   +    +
Sbjct: 432 LGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 491

Query: 468 DKNLEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKL 527
              + +  ALL  C+KH   +LG+   +QL  ++P N  +YV LSN YA+   W+ V ++
Sbjct: 492 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 551

Query: 528 RKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNT 587
           R  +++ GL      SW+E R ++ AF  GD SHPR + I   ++ +  +++E GF  N 
Sbjct: 552 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 611

Query: 588 DFRFHDV-DEERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNK 647
           D   HD+ DEE E  L  HSE +AI++GLIST  G  +RI KNLR C +CH + K IS  
Sbjct: 612 DASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKL 671

Query: 648 VGREIIVKDPYVFHHFKDGRCSCEDF 665
           V REI+V+D   FHHFKDG CSC D+
Sbjct: 672 VDREIVVRDTNRFHHFKDGVCSCGDY 693

[Close]
BLAST of CmoCh06G017390 vs. TAIR10
Match: AT3G23330.1 (AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 404.1 bits (1037), Expect = 1.7e-112
Identity = 223/656 (33.99%), Postives = 346/656 (52.74%), Query Frame = 1 

Query: 51  LFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGD 110
           LF  +      AW ++I+           ++++ +M + G  PD++  P V+ +     D
Sbjct: 61  LFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMD 120

Query: 111 LQLGKQLHAQAFKLGLFSNLYVFTSLIELYGIL--------------------------- 170
           L+ G+ +H    +LG+  +LY   +L+ +Y  L                           
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180

Query: 171 ---------DSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFSIDLFYQMVELAADI 230
                       D+ R + +    ++ VS+  +   Y        ++ +  +M       
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240

Query: 231 DAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKMYLDCGSIKDARGLF 290
           D+  L++ +        +  G+ IH      G++ D+ + + L+ MY     I+D+  +F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300

Query: 291 NRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLTISSILPACGRITAH 350
           +R+  RD ISW  L+  YV+NG  NEAL+LFRQM +  ++KP  +  SS++PAC  +   
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATL 360

Query: 351 KHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMKEKDMVSWTVVISGY 410
             G+++HGYVL+  F  N+ + +ALVDMY K G I++A KIF RM   D VSWT +I G+
Sbjct: 361 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 420

Query: 411 SLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGDFYFNCITE-----P 470
           +LHG G   V LF EM R   V  +++ + AVL ACS   +V+E   YFN +T+      
Sbjct: 421 ALHGHGHEAVSLFEEMKRQ-GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 480

Query: 471 TMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQKLGKRIIEQL 530
            + H+     LLGRAG+  EA  F+ K  ++    +   LL  C  H   +L +++ E++
Sbjct: 481 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 540

Query: 531 CDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFRNKIHAFGTG 590
             ++  N   YVL+ N YASN  W+ + KLR  +R  GLR K A SW+E +NK H F +G
Sbjct: 541 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSG 600

Query: 591 DVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALI-GHSELLAISFGLI 650
           D SHP    I   L+ +M++ME++G+  +T    HDVDEE +  L+ GHSE LA++FG+I
Sbjct: 601 DRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGII 660

Query: 651 STEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCSCEDF 665
           +TE G TIR+ KN+R+C  CH + KFIS    REIIV+D   FHHF  G CSC D+
Sbjct: 661 NTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDY 714

[Close]
BLAST of CmoCh06G017390 vs. TAIR10
Match: AT4G33990.1 (AT4G33990.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 386.0 bits (990), Expect = 4.8e-107
Identity = 223/626 (35.62%), Postives = 337/626 (53.83%), Query Frame = 1 

Query: 48  AHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRP-DNHTLPRVICASR 107
           A  LFD++P+ D  +WN +I  +  SG+    ++     LS G+R  D+ T+  ++ A  
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACT 263

Query: 108 HYGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTM 167
             GD   G  +H+ + K GL S L+V   LI+LY         + + D+   R+ +SW  
Sbjct: 264 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 323

Query: 168 LAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHG 227
           + K Y + ++P  +I LF +M       D + L +          ++  R++       G
Sbjct: 324 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 383

Query: 228 --LEFDILVSNCLLKMYLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKL 287
             LE DI + N ++ MY   G +  AR +FN +P  D+ISW  +I  Y +NG  +EA+++
Sbjct: 384 WFLE-DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEM 443

Query: 288 FRQMNMDGELKPDPLTISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYV 347
           +  M  +GE+  +  T  S+LPAC +  A + G ++HG +LKN    ++ V  +L DMY 
Sbjct: 444 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYG 503

Query: 348 KSGCIQSALKIFSRMKEKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYT 407
           K G ++ AL +F ++   + V W  +I+ +  HG G+  V LF+EM  +  V  D IT+ 
Sbjct: 504 KCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM-LDEGVKPDHITFV 563

Query: 408 AVLQACSTASMVEEGDFYFNCI-----TEPTMAHFVLKVALLGRAGRFNEARTFVDKHKL 467
            +L ACS + +V+EG + F  +       P++ H+   V + GRAG+   A  F+    L
Sbjct: 564 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 623

Query: 468 DKNLEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKL 527
             +  I  ALL  CR H    LGK   E L ++EP +   +VLLSN YAS  +WE V+++
Sbjct: 624 QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 683

Query: 528 RKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNT 587
           R      GLR    +S ME  NK+  F TG+ +HP  + +Y  L  L  K++  G+  + 
Sbjct: 684 RSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDH 743

Query: 588 DFRFHDV-DEERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNK 647
            F   DV D+E+E  L+ HSE LAI+F LI+T A  TIRI KNLRVC  CH   KFIS  
Sbjct: 744 RFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKI 803

Query: 648 VGREIIVKDPYVFHHFKDGRCSCEDF 665
             REIIV+D   FHHFK+G CSC D+
Sbjct: 804 TEREIIVRDSNRFHHFKNGVCSCGDY 822

[Close]
BLAST of CmoCh06G017390 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 382.9 bits (982), Expect = 4.1e-106
Identity = 219/661 (33.13%), Postives = 352/661 (53.25%), Query Frame = 1 

Query: 43  AHLCVAHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRG-VRPDNHTLPRV 102
           A L  A ++FD+IP  ++FAWN LI+ + +  D    I  +  M+S     P+ +T P +
Sbjct: 78  ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137

Query: 103 ICASRHYGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNA 162
           I A+     L LG+ LH  A K  + S+++V  SLI  Y      D+A  +      ++ 
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197

Query: 163 VSWTMLAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHV 222
           VSW  +   ++ +  P  +++LF +M         V +   + AC   + L+ GR +   
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257

Query: 223 ARIHGLEFDILVSNCLLKMYLDCGSIKDARGLF--------------------------- 282
              + +  ++ ++N +L MY  CGSI+DA+ LF                           
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317

Query: 283 ----NRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLTISSILPACGR 342
               N MP +DI++W  LI  Y +NG  NEAL +F ++ +   +K + +T+ S L AC +
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377

Query: 343 ITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMKEKDMVSWTVV 402
           + A + GR IH Y+ K+    N  V +AL+ MY K G ++ + ++F+ ++++D+  W+ +
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437

Query: 403 ISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGDFYFNCITE-- 462
           I G ++HG G   V +F +M +  +V  + +T+T V  ACS   +V+E +  F+ +    
Sbjct: 438 IGGLAMHGCGNEAVDMFYKM-QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 497

Query: 463 ---PTMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQKLGKRI 522
              P   H+   V +LGR+G   +A  F++   +  +  +  ALL  C+ H    L +  
Sbjct: 498 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 557

Query: 523 IEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFRNKIHA 582
             +L +LEP N   +VLLSN YA   +WE V +LRK +R  GL+ +   S +E    IH 
Sbjct: 558 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 617

Query: 583 FGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEE--RECALIGHSELLAI 642
           F +GD +HP S+ +Y  L  +M+K++ +G++         ++EE  +E +L  HSE LAI
Sbjct: 618 FLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 677

Query: 643 SFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCSCED 665
            +GLISTEA + IR+ KNLRVC  CH  AK IS    REIIV+D Y FHHF++G+CSC D
Sbjct: 678 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 737

[Close]
BLAST of CmoCh06G017390 vs. NCBI nr
Match: gi|778682994|ref|XP_004137884.2| (PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 1158.3 bits (2995), Expect = 0.0e+00
Identity = 548/665 (82.41%), Postives = 598/665 (89.92%), Query Frame = 1 

Query: 1   MDLLLSTPIHRLPLTQKPNHTYDRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           M+LLLST  H LP+TQKPNH Y RH  FNN PHVRT T E  A+LCVAHQ+FDDIPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLT+GD+GHVISTY+QML RGVRPD HTLPR+ICA+R YGDLQ+GKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLG  SNLYV TSLIELYGILDSADTA+WLHDKS CRN+VSWT+LAKLYL EDKPS +
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKM 240
           +DLFYQMVELA DIDAVALATAIGACGA K+L HGRNIHH+AR+HGLEF+ILVSN LLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240

Query: 241 YLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           Y+DC SIKDARG F++MP +DIISWT+LIH YVK GGINEA KLFRQMNMDGELKPDP T
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300

Query: 301 ISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGR+ AHKHG+EIHGYV+KN FD+NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGD 420
           EKDMVSW+++  GYSLHGQGKLGV LFREM++NF + RDEITYTAVL AC+TA+MV+EGD
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQK 480
            YF+CIT+PT+AH  LKVALL RAGR +EARTFV+K KLDK+ EILRALLDGCR H QQK
Sbjct: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLNAENY+LLSNWYA NE+W+MVEKLR+TIRDMGLRPKKAYSW+EF 
Sbjct: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIH FGTGDVSHPRSQ IYWNLQCLMK+MEEDG K N DF  HDVDEEREC  IGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCS 660
           LAISFGLISTEAGRTIRI KNLRVCHSCHESAKFIS  VGREIIVKDPYVFHHFKDG CS
Sbjct: 601 LAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCS 660

Query: 661 CEDFC 666
           CE+FC
Sbjct: 661 CENFC 665

[Close]
BLAST of CmoCh06G017390 vs. NCBI nr
Match: gi|659130420|ref|XP_008465161.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-like [Cucumis melo])

HSP 1 Score: 1148.3 bits (2969), Expect = 0.0e+00
Identity = 545/665 (81.95%), Postives = 596/665 (89.62%), Query Frame = 1 

Query: 1   MDLLLSTPIHRLPLTQKPNHTYDRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           M+LLLST  H LP+TQKP H Y RH  FNN PHVRTTT E  A LCVAHQ+FD+IPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPYHAYHRHPPFNNLPHVRTTTVENYADLCVAHQVFDEIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLT+GD GHVIS Y+QML RGVRPD HTLPR+ICA+R YGDL +GKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDWGHVISIYRQMLFRGVRPDKHTLPRIICATRQYGDLPVGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLG  S+LYV TSLIELYGILDSADTA+WLHDKS CRN+VSWT+LAKLYL EDKPSF+
Sbjct: 121 AFKLGFSSDLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTILAKLYLREDKPSFA 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKM 240
           IDLFYQMVELA DID+VALATAIGACGA K+L HGRNIHH+ARIHGLEF+ILVSN LLKM
Sbjct: 181 IDLFYQMVELADDIDSVALATAIGACGALKMLHHGRNIHHLARIHGLEFNILVSNSLLKM 240

Query: 241 YLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           YLDC SIKDARG F++MP +D+ISWT+LIH YVK GGINEA KLFRQMNMDGELKPDPLT
Sbjct: 241 YLDCDSIKDARGFFDQMPSKDVISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGR+ AHKHG+EIHGYVLKN FD+NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVLKNGFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGD 420
           EKDMVSW+++  GYSLHGQGKLGVGLFREM++N  +HRDEITYTAVL AC+TA+MV+EGD
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVGLFREMEKNLKMHRDEITYTAVLHACTTANMVDEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQK 480
           FYF+ IT+PT+AH  LKVALL RAGR +EARTFV+K KL+K+ EILRALLDGCR H QQK
Sbjct: 421 FYFSRITKPTVAHIALKVALLARAGRLDEARTFVEKKKLNKHPEILRALLDGCRNHRQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLN ENY+LLSNWYA N++W+MVE+LR+TIRDMGLRPKKAYSW+EF 
Sbjct: 481 LGKRIIEQLCDLEPLNTENYILLSNWYACNKKWDMVEELRETIRDMGLRPKKAYSWIEFC 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIH FGTGDVSHPRSQ IYWNLQCLMKKMEEDG K N +F  HDVDEEREC  IGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKKMEEDGSKTNPEFSLHDVDEERECVPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCS 660
           LAISFGLISTEAGRTIRI KNLRVCHSCHESAKFIS  VGREIIVKDPYVFHHFKDG CS
Sbjct: 601 LAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCS 660

Query: 661 CEDFC 666
           CE+FC
Sbjct: 661 CENFC 665

[Close]
BLAST of CmoCh06G017390 vs. NCBI nr
Match: gi|700203537|gb|KGN58670.1| (hypothetical protein Csa_3G722890 [Cucumis sativus])

HSP 1 Score: 1073.9 bits (2776), Expect = 1.0e-310
Identity = 518/659 (78.60%), Postives = 571/659 (86.65%), Query Frame = 1 

Query: 1   MDLLLSTPIHRLPLTQKPNHTYDRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           M+LLLST  H LP+TQKPNH Y RH  FNN PHVRT T E  A+LCVAHQ+FDDIPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLT+GD+GHVISTY+QML RGVRPD HTLPR+ICA+R YGDLQ+GKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLG  SNLYV TSLIELYGILDSADTA+WLHDKS CRN+VSWT+LAKLYL EDKPS +
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKM 240
           +DLFYQMVELA DIDAVALATAIGACGA K+L HGRNIHH+AR+HGLEF+ILVSN LLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240

Query: 241 YLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           Y+DC SIKDARG F++MP +DIISWT+LIH YVK GGINEA KLFRQMNMDGELKPDP T
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300

Query: 301 ISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGR+ AHKHG+EIHGYV+KN FD+NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGD 420
           EKDMVSW+++  GYSLHGQGKLGV LFREM++NF + RDEITYTAVL AC+TA+MV+EGD
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQK 480
            YF+CIT+PT+AH  LKVALL RAGR +EARTFV+K KLDK+ EILRALLDGCR H QQK
Sbjct: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLNAENY+LLSNWYA NE+W+MVEKLR+TIRDMGLRPKKAYSW+EF 
Sbjct: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIH FGTGDVSHPRSQ IYWNLQCLMK+MEEDG K N DF  HDVDEEREC  IGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRC 660
           LAISFGLISTEAGRTIRI KNLR+  +                +VK    F +F DGRC
Sbjct: 601 LAISFGLISTEAGRTIRITKNLRMVAA----------------LVK---TFVNFIDGRC 640

[Close]
BLAST of CmoCh06G017390 vs. NCBI nr
Match: gi|225441828|ref|XP_002278166.1| (PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Vitis vinifera])

HSP 1 Score: 864.0 bits (2231), Expect = 1.7e-247
Identity = 411/664 (61.90%), Postives = 514/664 (77.41%), Query Frame = 1 

Query: 1   MDLLLSTPIHRLPLTQKPNHTYDRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           MD+L ST    + + QK  +        N   HVR +  +K+    + HQLFD+IP+ +T
Sbjct: 1   MDVLSSTQSQSIFVKQKSTNATHCKNPSNLRSHVRMS--QKSIDFGLTHQLFDEIPVSNT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLT+GD   V+STY+QML RGVRPD HT+PR++ A+RH      GKQ+H  
Sbjct: 61  FAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAARHTSSFSFGKQVHGH 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           A KLGL S  YV ++L+E+YG LD A+ A+ +  KSA RN+VSWT++++LY+MEDKP  +
Sbjct: 121 ALKLGLSSESYVISALLEMYGRLDGANAAKLVFCKSARRNSVSWTLISRLYIMEDKPGLA 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKM 240
           +D+F QMVE  ++ID +AL TAI ACG  K LQ GR +H +A+  GLE D+LVSN LLKM
Sbjct: 181 VDMFKQMVESKSEIDPLALVTAIVACGMLKSLQEGRYVHEIAKKCGLEADVLVSNSLLKM 240

Query: 241 YLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           Y+DCGSIKDAR +F+RMP +D+ISWT++   YVKNGG NE LKLFRQM+M+G +KPD L 
Sbjct: 241 YIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEG-VKPDSLA 300

Query: 301 ISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGR  AHK G+EIH Y+L+N  D N+ VQNA++DMYVKSG I+SA KIF+ MK
Sbjct: 301 ISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIFAGMK 360

Query: 361 EKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGD 420
           ++D +SWTV+I GYSLHGQG+LGV LFR+M++N SV  D+I Y A L AC+TA +VE+G 
Sbjct: 361 DRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVEQGR 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQK 480
           FYFNCIT P   H+ L VALL R G F+EAR F+++HKL+ ++E+LRALLDGCR HH  +
Sbjct: 421 FYFNCITAPKSRHYALMVALLSRVGLFDEARVFMEEHKLEGHVEVLRALLDGCRIHHNMR 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
             KR+IEQLCDL+ LNA+NYVLLSNWY+S  +W+MV +LR+TIRDMGL+P+KAYSW+EFR
Sbjct: 481 TAKRVIEQLCDLQTLNADNYVLLSNWYSSFAKWDMVNELRETIRDMGLKPRKAYSWIEFR 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIH FGTGDVSHPRS+ IYW L  LMKK+EE+G + N DF  HDVDEEREC  IGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSEKIYWELHSLMKKIEEEGTRLNLDFSLHDVDEERECVPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCS 660
           LA SFGLIST+AG TIR+ KNLR+C +CH+SAK IS  V REII+KDP  FHHFKDG CS
Sbjct: 601 LATSFGLISTQAGATIRVTKNLRMCGNCHDSAKAISKIVEREIIIKDPSCFHHFKDGFCS 660

Query: 661 CEDF 665
           C DF
Sbjct: 661 CGDF 661

[Close]
BLAST of CmoCh06G017390 vs. NCBI nr
Match: gi|1009160317|ref|XP_015898285.1| (PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 849.7 bits (2194), Expect = 3.3e-243
Identity = 415/667 (62.22%), Postives = 509/667 (76.31%), Query Frame = 1 

Query: 1   MDLLLSTPIHRLPLTQKPNHTYDRHRLFNNPP---HVRTTTAEKNAHLCVAHQLFDDIPI 60
           MD+L ST IHR   T  P+HT   H+L ++P    + R     K+  L + H  FD+IP+
Sbjct: 1   MDVLPSTHIHRFVSTVVPSHT--PHQLNHSPYLHCNTRVPVKLKSGELLLTHHAFDEIPV 60

Query: 61  WDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQL 120
            DTFAWNNLIQTHLT GD   V STY QML RGV PD HTLPRV+ ASR  G L LGKQL
Sbjct: 61  SDTFAWNNLIQTHLTHGDFQLVFSTYHQMLLRGVHPDRHTLPRVLAASRLSGYLFLGKQL 120

Query: 121 HAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSA-CRNAVSWTMLAKLYLMEDK 180
           H QA KLG  S+ YV T+L+E+YG LD+ DTARWL DKS+  RN+VSWT+LAKLY+ E +
Sbjct: 121 HGQALKLGFSSDQYVVTALLEIYGRLDTVDTARWLLDKSSPSRNSVSWTLLAKLYIEEGQ 180

Query: 181 PSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNC 240
           PS +I LFYQM++  A+ID+VALATAI AC + K L+ GR +H VAR  GLEFD+LVSN 
Sbjct: 181 PSSAIHLFYQMLDFGAEIDSVALATAIVACASLKSLKQGRKVHQVARNCGLEFDVLVSNS 240

Query: 241 LLKMYLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKP 300
           LLKMY+DC SI++AR +F+ MP +DIISWT +IH YVK GG NE LKLFRQM  DG LKP
Sbjct: 241 LLKMYIDCSSIQEARVIFDSMPSKDIISWTSIIHAYVKKGGFNEGLKLFRQMVKDG-LKP 300

Query: 301 DPLTISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIF 360
           D L+ISSILPAC R+TA+K GREIHGY+L+N  + N+ V NA++DMY KSGCI SA K+F
Sbjct: 301 DQLSISSILPACARVTANKQGREIHGYLLRNGMELNVTVFNAVIDMYAKSGCINSASKMF 360

Query: 361 SRMKEKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMV 420
            +++ KD+VSWT++I GYSLHGQG LGV LF EM+++ S+  D++TY AVL ACSTA +V
Sbjct: 361 RQLRWKDVVSWTIMIMGYSLHGQGDLGVDLFGEMEKDSSILIDQVTYGAVLHACSTARLV 420

Query: 421 EEGDFYFNCITEPTMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKH 480
           EEG FYFNCI  P + H  L VALL  +G F+EA  F+ K K+++N E+LR LL+GCR H
Sbjct: 421 EEGKFYFNCIMTPEVTHLALMVALLAHSGLFDEAMAFIKKQKVERNAEVLRPLLEGCRIH 480

Query: 481 HQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSW 540
            ++ LGK ++EQLC+LE LN ENYVLLSNWYA N +W MV+KL  TI D+GL+ KKAYSW
Sbjct: 481 RKKNLGKWVVEQLCELESLNPENYVLLSNWYAVNAKWGMVDKLYGTIIDLGLKAKKAYSW 540

Query: 541 MEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIG 600
           +E RNKIH FGTGDVSHPRS+ IYW LQCLMKK+E++G++ + D+  HDVDEEREC  IG
Sbjct: 541 IELRNKIHVFGTGDVSHPRSERIYWELQCLMKKIEDEGYRPSEDYSLHDVDEERECIQIG 600

Query: 601 HSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKD 660
           HSE+LA+SFGLIST  G TIR+ KNLRVC +CH+ AK IS  V REII+KDP  FHHF+D
Sbjct: 601 HSEMLALSFGLISTHIGSTIRVTKNLRVCRNCHDCAKIISKFVQREIILKDPNRFHHFQD 660

Query: 661 GRCSCED 664
           G CSC D
Sbjct: 661 GFCSCGD 664

The following BLAST results are available for this feature:
BLAST of CmoCh06G017390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP320_ARATH1.1e-12436.98Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
PP224_ARATH2.6e-11835.46Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... [more]
PP251_ARATH3.0e-11133.99Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
PP348_ARATH8.6e-10635.62Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN... [more]
PP175_ARATH7.3e-10533.13Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
BLAST of CmoCh06G017390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9N4_CUCSA7.2e-31178.60Uncharacterized protein OS=Cucumis sativus GN=Csa_3G722890 PE=4 SV=1[more]
M5XS66_PRUPE8.0e-23660.99Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020455mg PE=4 SV=1[more]
A5AJ01_VITVI1.1e-23559.67Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011875 PE=4 SV=1[more]
W9RUH8_9ROSA9.9e-22661.05Uncharacterized protein OS=Morus notabilis GN=L484_009366 PE=4 SV=1[more]
A0A061DP49_THECC2.5e-22158.42Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_... [more]
BLAST of CmoCh06G017390 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G18750.16.1e-12636.98 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G12770.11.4e-11935.46 mitochondrial editing factor 22[more]
AT3G23330.11.7e-11233.99 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G33990.14.8e-10735.62 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G29760.14.1e-10633.13 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CmoCh06G017390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778682994|ref|XP_004137884.2|0.0e+0082.41PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like ... [more]
gi|659130420|ref|XP_008465161.1|0.0e+0081.95PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-... [more]
gi|700203537|gb|KGN58670.1|1.0e-31078.60hypothetical protein Csa_3G722890 [Cucumis sativus][more]
gi|225441828|ref|XP_002278166.1|1.7e-24761.90PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like ... [more]
gi|1009160317|ref|XP_015898285.1|3.3e-24362.22PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G017390.1CmoCh06G017390.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 235..258
score: 0.37coord: 62..91
score: 0.47coord: 337..363
score: 1.4E-4coord: 365..392
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 261..308
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 335..365
score: 8.4E-5coord: 263..297
score: 6.8E-4coord: 62..94
score: 5.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 261..295
score: 9.723coord: 496..530
score: 7.651coord: 160..194
score: 6.347coord: 59..93
score: 10.315coord: 230..260
score: 7.311coord: 332..366
score: 9.657coord: 399..433
score: 6
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 159..207
score: 2.8E-7coord: 264..288
score: 2.8E-7coord: 326..363
score: 2.8E-7coord: 62..93
score: 2.8E-7coord: 460..563
score: 2.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 48..537
score: 7.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G017390CmaCh06G017540Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G017390Cla017201Watermelon (97103) v1cmowmB785
CmoCh06G017390ClCG10G013040Watermelon (Charleston Gray)cmowcgB732
CmoCh06G017390Lsi03G012690Bottle gourd (USVL1VR-Ls)cmolsiB748
CmoCh06G017390Cp4.1LG08g06570Cucurbita pepo (Zucchini)cmocpeB796
CmoCh06G017390Cla97C10G195910Watermelon (97103) v2cmowmbB821
CmoCh06G017390Bhi11G001266Wax gourdcmowgoB0989
CmoCh06G017390Carg23320Silver-seed gourdcarcmoB0383
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G017390Cucurbita moschata (Rifu)cmocmoB226
CmoCh06G017390Cucurbita maxima (Rimu)cmacmoB270
CmoCh06G017390Cucurbita maxima (Rimu)cmacmoB273
CmoCh06G017390Melon (DHL92) v3.5.1cmomeB748
CmoCh06G017390Cucurbita pepo (Zucchini)cmocpeB786
CmoCh06G017390Melon (DHL92) v3.6.1cmomedB850
CmoCh06G017390Silver-seed gourdcarcmoB1106