CmoCh06G015350 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G015350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pectin lyase-like superfamily protein, putative
Location	Cmo_Chr06 : 10862049 .. 10863646 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCTTCTTCGAAACTACCCGTCCTTCTCGGGTTGTTCTTAGCATCATTCGTTGCTGCCAAGGCAAAGGCGCTCATTGGACCGAGCACGCCCGACCCCTTTTCATCAATTAGTCTAAACAGTATTACACATCGAAAGGAAGCCGTGTTTAACGTGCTTAGTTTCGGTGCCAAACTCGGTGGCACTAAAGACAACACTCAAGTAATTGTTAAGCATGTTTTGTTACCATCGTTGTCGTTGTCATCGTTGTCGTTTAATGATGTCTTTTTTGGTAGAATTTCATGAAGACATGGGTTGCCGCTTGTCGCTCCAAGCAACCGGCTAGAGTTGTTATTCCCAGTGGTGTGTTTTTGATCAATCAAATCGTCTTCGCTGGGCCTTGTCGGAACACTGAACCAATTGTCGTTCAAATTGATGCCACGTTGAAAGGCGGCGTTGACGTCAGCGAATACGTCTCAGCTGAATGGATATTGTTCGAGAAAATCAATGGTTTGATAGTGACTGGACGAGGTACATTGGATGGACAAGGTAGTAAGGTTTGGAAGTACAATGATTGCCATGTGAATCAAAATTGTCAGAAGCTCCCAGTTGTAAGGACAAACATGTTTTTTTTTTTTTTTTGTCATGTCAATTATTCACCGTCTCATTCTTTCCTCGTTCTTCGTTCTTAGAGTTTTAAACTCAATGGCATCCGACACGGACTCGTGAAAGGCCTCACTTCCCTTAACAGTAAAGGGAATCACATGTTCATCACGAATTCCGAAAATATTAGGGTTCGAAAGCTACACCTGATCGCACCAGATGATAGTCCGAACACTGATGGTATACATCTTAGTCGCTCCACTAATGTGAGAATTACAAAATCTATCATTGCTACAGGTGACGACTGTATCTCTGTCGGTAGAGGATCGATGAATGTTGTTATCACCCAAATAAAATGCGGGCCAGGACACGGTATCAGGTAATAAAAAAAAACGTGTTTGTGTTCTTGTTTAGCTATGTAATATTGCATACGACGTGATGATCAACGAGGGTTCTACTATGACAGTATTGGTAGCCTTGGGAAGTACCCAAATGAGGAGGACGTGCGGGGTATTATCGTTAGGAACTGCACGTTAATTAACACCGACAACGGGCTTAGAATCAAAACATGGGCAGACTCGCCCCCGAGTGCAGCAGTAGGCATACTATTCCAAGACATCAATTTGATCAATGTGAAGAATCCGATCATCATCGACCAACAGTACAGCTGCTCAAAAGTTTGCAAAAAGCCGGTTCGTTATTATTTTTGTTTTCGTCTTTCGTTTCTCAATCAAACTTAACCCGATTCTAACGTGATTTTATCGGGTACAATGCAGCCATCACGAGTCCGAATCAGCGATGTTCATTTCGTGAATATAAAAGGAACAACAATCTCTCCAGTAGCAGTTAAACTGGTATGCAGCAAGCGGTTCCCATGCCAAAACATTGAGATGTCCAACGTAAATCTAAAGTACAGTGGGCGTCCGAACGACAAGGCGTTGCCGTTTAGGTCAGATTGTACAAATGCAAAAGTAGGCTATAGAGGTCTGCAATTTCCAGCCCCCTGCAAGTGA

mRNA sequence

ATGAATTCTTCTTCGAAACTACCCGTCCTTCTCGGGTTGTTCTTAGCATCATTCGTTGCTGCCAAGGCAAAGGCGCTCATTGGACCGAGCACGCCCGACCCCTTTTCATCAATTAGTCTAAACAGTATTACACATCGAAAGGAAGCCGTGTTTAACGTGCTTAGTTTCGGTGCCAAACTCGGTGGCACTAAAGACAACACTCAAAATTTCATGAAGACATGGGTTGCCGCTTGTCGCTCCAAGCAACCGGCTAGAGTTGTTATTCCCAGTGGTGTGTTTTTGATCAATCAAATCGTCTTCGCTGGGCCTTGTCGGAACACTGAACCAATTGTCGTTCAAATTGATGCCACGTTGAAAGGCGGCGTTGACGTCAGCGAATACGTCTCAGCTGAATGGATATTGTTCGAGAAAATCAATGGTTTGATAGTGACTGGACGAGGTACATTGGATGGACAAGGTAGTAAGGTTTGGAAGTACAATGATTGCCATGTGAATCAAAATTGTCAGAAGCTCCCAGTTAGTTTTAAACTCAATGGCATCCGACACGGACTCGTGAAAGGCCTCACTTCCCTTAACAGTAAAGGGAATCACATGTTCATCACGAATTCCGAAAATATTAGGGTTCGAAAGCTACACCTGATCGCACCAGATGATAGTCCGAACACTGATGGTATACATCTTAGTCGCTCCACTAATGTGAGAATTACAAAATCTATCATTGCTACAGGTGACGACTGTATCTCTGTCGGTAGAGGATCGATGAATGTTGTTATCACCCAAATAAAATGCGGGCCAGGACACGGTATCAGTATTGGTAGCCTTGGGAAGTACCCAAATGAGGAGGACGTGCGGGGTATTATCGTTAGGAACTGCACGTTAATTAACACCGACAACGGGCTTAGAATCAAAACATGGGCAGACTCGCCCCCGAGTGCAGCAGTAGGCATACTATTCCAAGACATCAATTTGATCAATGTGAAGAATCCGATCATCATCGACCAACAGTACAGCTGCTCAAAAGTTTGCAAAAAGCCGCCATCACGAGTCCGAATCAGCGATGTTCATTTCGTGAATATAAAAGGAACAACAATCTCTCCAGTAGCAGTTAAACTGGTATGCAGCAAGCGGTTCCCATGCCAAAACATTGAGATGTCCAACGTAAATCTAAAGTACAGTGGGCGTCCGAACGACAAGGCGTTGCCGTTTAGGTCAGATTGTACAAATGCAAAAGTAGGCTATAGAGGTCTGCAATTTCCAGCCCCCTGCAAGTGA

Coding sequence (CDS)

ATGAATTCTTCTTCGAAACTACCCGTCCTTCTCGGGTTGTTCTTAGCATCATTCGTTGCTGCCAAGGCAAAGGCGCTCATTGGACCGAGCACGCCCGACCCCTTTTCATCAATTAGTCTAAACAGTATTACACATCGAAAGGAAGCCGTGTTTAACGTGCTTAGTTTCGGTGCCAAACTCGGTGGCACTAAAGACAACACTCAAAATTTCATGAAGACATGGGTTGCCGCTTGTCGCTCCAAGCAACCGGCTAGAGTTGTTATTCCCAGTGGTGTGTTTTTGATCAATCAAATCGTCTTCGCTGGGCCTTGTCGGAACACTGAACCAATTGTCGTTCAAATTGATGCCACGTTGAAAGGCGGCGTTGACGTCAGCGAATACGTCTCAGCTGAATGGATATTGTTCGAGAAAATCAATGGTTTGATAGTGACTGGACGAGGTACATTGGATGGACAAGGTAGTAAGGTTTGGAAGTACAATGATTGCCATGTGAATCAAAATTGTCAGAAGCTCCCAGTTAGTTTTAAACTCAATGGCATCCGACACGGACTCGTGAAAGGCCTCACTTCCCTTAACAGTAAAGGGAATCACATGTTCATCACGAATTCCGAAAATATTAGGGTTCGAAAGCTACACCTGATCGCACCAGATGATAGTCCGAACACTGATGGTATACATCTTAGTCGCTCCACTAATGTGAGAATTACAAAATCTATCATTGCTACAGGTGACGACTGTATCTCTGTCGGTAGAGGATCGATGAATGTTGTTATCACCCAAATAAAATGCGGGCCAGGACACGGTATCAGTATTGGTAGCCTTGGGAAGTACCCAAATGAGGAGGACGTGCGGGGTATTATCGTTAGGAACTGCACGTTAATTAACACCGACAACGGGCTTAGAATCAAAACATGGGCAGACTCGCCCCCGAGTGCAGCAGTAGGCATACTATTCCAAGACATCAATTTGATCAATGTGAAGAATCCGATCATCATCGACCAACAGTACAGCTGCTCAAAAGTTTGCAAAAAGCCGCCATCACGAGTCCGAATCAGCGATGTTCATTTCGTGAATATAAAAGGAACAACAATCTCTCCAGTAGCAGTTAAACTGGTATGCAGCAAGCGGTTCCCATGCCAAAACATTGAGATGTCCAACGTAAATCTAAAGTACAGTGGGCGTCCGAACGACAAGGCGTTGCCGTTTAGGTCAGATTGTACAAATGCAAAAGTAGGCTATAGAGGTCTGCAATTTCCAGCCCCCTGCAAGTGA

Homology

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BLAST of CmoCh06G015350 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.3e-96
Identity = 171/373 (45.84%), Postives = 243/373 (65.15%), Query Frame = 1


Query: 49  AVFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNTE 108
           +VFNV  +GAK  G  D +Q  MK W AAC S+ P+ V+IP G + + ++   GPC+ ++
Sbjct: 8   SVFNVNDYGAK--GAGDISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSK 67

Query: 109 PIVVQIDATLKGGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQNC 168
            I  QID  +K   D S++ S  W+ F +I+GL V+G GTLDGQG   W  N+C  N NC
Sbjct: 68  -IGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNC 127

Query: 169 QKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHLS 228
           +   ++ + + ++H +V+ +TSLNSK  H+ +   E+I  + + + AP  S NTDGIH+ 
Sbjct: 128 KHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVG 187

Query: 229 RSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGIIV 288
            S  V IT + IATGDDCIS+G GS NV ITQ+ CGPGHGISIGSLG+Y NE++VRGI V
Sbjct: 188 ISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITV 247

Query: 289 RNCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCSKVC-KKPPS 348
           + CT   T NG+R+KTW +SPP AA  + FQD+ + NV+NP+I+DQ+Y     C ++ PS
Sbjct: 248 KGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPS 307

Query: 349 RVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDCT 408
           R+++S+++F NI+GT+   VAV + CS   PC N+++  +NL Y G       P  S C+
Sbjct: 308 RIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGG----PATSTCS 367

Query: 409 NAKVGYRGLQFPA 421
           N K  + G Q PA
Sbjct: 368 NVKPTFSGKQVPA 373

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BLAST of CmoCh06G015350 vs. Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 3.3e-95
Identity = 173/378 (45.77%), Postives = 239/378 (63.23%), Query Frame = 1


Query: 50  VFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRN--T 109
           V+++  FGA   G+ +  + F+ TW+  C S  PA +++P G FL   ++FAGPC++  T
Sbjct: 51  VYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVT 110

Query: 110 EPIVVQIDATLKGGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQN 169
             ++  I AT  G      Y + EW LFE+++ L++TG GT  G+G  VWK + C     
Sbjct: 111 VNVIGTIIATTSG------YATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQ 170

Query: 170 CQKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHL 229
           C   P S K   +++  + G++S+N+K  HMF+  +EN+ ++ + L AP +SPNTDGIHL
Sbjct: 171 CNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHL 230

Query: 230 SRSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGII 289
           S + NV I  S IATGDDC+SVGRGS NV + ++ CGPGHG+S+GSLGKY NEEDV GI 
Sbjct: 231 SNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIH 290

Query: 290 VRNCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCSKVCKKPPS 349
           V NCT+I TDNGLRIKTW  S PS AV I F++I + +VKNPIIIDQ Y      +   S
Sbjct: 291 VNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYG----SRGGDS 350

Query: 350 RVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSD-- 409
           +V ISD+ F NI+GTTI+   V+++CSK  PCQ + + +VNL Y G+   +         
Sbjct: 351 QVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGKTGGEKKSSSGGLV 410

Query: 410 ---CTNAKVGYRG-LQFP 420
              C NA V + G L FP
Sbjct: 411 GALCDNANVIFGGKLSFP 418

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BLAST of CmoCh06G015350 vs. Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 4.3e-87
Identity = 159/371 (42.86%), Postives = 227/371 (61.19%), Query Frame = 1


Query: 53  VLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNTEPIVV 112
           V  FGAK  G  D ++ F+  W  AC S  P+ VVIP G +L++++   GPC+   PI +
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCK--APIEI 91

Query: 113 QIDATLKGGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQNCQKLP 172
            +  T++   D S +    W+ F  +    + G G  DGQGS  ++ N C   +   KLP
Sbjct: 92  NVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLP 151

Query: 173 VSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHLSRSTN 232
           V+ + + + + L++ +TS +SK  H+ +   +NI + +L + APD+SPNTDGIH+ +S  
Sbjct: 152 VNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEG 211

Query: 233 VRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGIIVRNCT 292
           V I  S I TGDDCIS+G G+ N+VI +I CGPGHGISIGSLGK+ NEE V GI + NCT
Sbjct: 212 VNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCT 271

Query: 293 LINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCSKVCKK-PPSRVRI 352
           + NT NG RIKTW      A   I F+DI + NV +PI+IDQQY     CKK   S+V++
Sbjct: 272 ITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKL 331

Query: 353 SDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDCTNAKV 412
           S++ F NI+GT+  P A+K +CS   PCQN+E++++++K++G     A P  S C N K 
Sbjct: 332 SNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNG-----AEPATSQCLNVKP 391

Query: 413 GYRGLQFPAPC 423
              G   P PC
Sbjct: 392 ITSGKLNPIPC 395

[Close]

BLAST of CmoCh06G015350 vs. Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.7e-86
Identity = 158/371 (42.59%), Postives = 227/371 (61.19%), Query Frame = 1


Query: 53  VLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNTEPIVV 112
           V  FGAK  G  D ++ F+  W  AC S  P+ VVIP G +L++++   GPC+   PI +
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCK--APIEI 91

Query: 113 QIDATLKGGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQNCQKLP 172
            +  T++   D S +    W+ F  +    + G G  DGQGS  ++ N C   +   KLP
Sbjct: 92  NVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLP 151

Query: 173 VSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHLSRSTN 232
           V+ + + + + L++ +TS +SK  H+ +   +NI + +L + APD+SPNTDGIH+ +S  
Sbjct: 152 VNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEG 211

Query: 233 VRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGIIVRNCT 292
           V I  S I TGDDCIS+G G+ N+VI +I CGPGHGISIGSLGK+ NEE V GI + NCT
Sbjct: 212 VNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCT 271

Query: 293 LINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCSKVCKK-PPSRVRI 352
           + NT NG RIKTW      A   I F+DI + NV +PI+IDQQY     CKK   S+V++
Sbjct: 272 ITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKL 331

Query: 353 SDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDCTNAKV 412
           S++ F NI+GT+  P A+K +CS   PCQN+E+++++++++G     A P  S C N K 
Sbjct: 332 SNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNG-----AEPATSQCLNVKP 391

Query: 413 GYRGLQFPAPC 423
              G   P PC
Sbjct: 392 ITIGKLNPIPC 395

[Close]

BLAST of CmoCh06G015350 vs. Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 3.1e-85
Identity = 158/374 (42.25%), Postives = 231/374 (61.76%), Query Frame = 1


Query: 50  VFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNTEP 109
           VF++  +GA      D ++  +  +  AC+S  P+ +VIP G F +NQ+   GPC++  P
Sbjct: 26  VFDITKYGAN--SNADISEALLNAFKEACQSTSPSTIVIPKGTFTMNQVKLEGPCKS--P 85

Query: 110 IVVQIDATLKGGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQNCQ 169
           + +QI ATLK   D S+    EW+   K++   ++G G LDGQ +  W   +C  ++ C 
Sbjct: 86  LELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAW---ECKQSKKCN 145

Query: 170 KLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHLSR 229
           KLP +   N + +  +K +T+L+SK  H+ +   +N+   + ++ AP +SPNTDGIH+SR
Sbjct: 146 KLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSR 205

Query: 230 STNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGIIVR 289
           S++V IT S  +TGDDCISVG  +  + IT++ CGPGHGIS+GSLG  P+E+ V G+ VR
Sbjct: 206 SSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVR 265

Query: 290 NCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCSKVCKKP-PSR 349
           NCT  NTDNG+RIKTW  S P     + F+DI + NV NP++IDQ Y     C K  PS+
Sbjct: 266 NCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQ 325

Query: 350 VRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDCTN 409
           V+IS V F NIKGT+ +  AV L+ SK  PC+ IE+ ++++ YSG+      P +S C N
Sbjct: 326 VKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEG----PAKSSCEN 385

Query: 410 AKVGYRGLQFPAPC 423
            K   +G Q P  C
Sbjct: 386 IKPSLKGKQNPPVC 388

[Close]

BLAST of CmoCh06G015350 vs. TrEMBL
Match: A0A0A0LAM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G164550 PE=3 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 3.4e-187
Identity = 313/425 (73.65%), Postives = 365/425 (85.88%), Query Frame = 1


Query: 1   MNSSSKLPVLLGLFLASFVAAKAKALIGPSTPDPFSSISLNS-ITHRKEAVFNVLSFGAK 60
           M+S  K  +LL L L + VA  AK L GP +PDPF +++L   I HRKE VFNVLSFGAK
Sbjct: 1   MSSVFKQLILLTLLLVALVAVDAKLLAGPISPDPFLNVNLGKDIKHRKETVFNVLSFGAK 60

Query: 61  LGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNTEPIVVQIDATLK 120
             G  DN+++FMKTWVAAC SK  ARVVIP G FLINQI FAGPC +T PI+VQIDATLK
Sbjct: 61  PDGKTDNSESFMKTWVAACHSKGAARVVIPRGTFLINQIAFAGPCASTSPIIVQIDATLK 120

Query: 121 GGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQNCQKLPVSFKLNG 180
           GGVD+S Y S EWILFEKINGLIVTGRG LDGQGS VW+YNDC +N NCQKLPV+ KLN 
Sbjct: 121 GGVDISNYFSDEWILFEKINGLIVTGRGALDGQGSAVWEYNDCGMNPNCQKLPVNLKLNN 180

Query: 181 IRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHLSRSTNVRITKSI 240
           I HGLVKG++S+NSKG HMF+TN EN+R+RKLHL AP+DSPNTDGIHLSRS N++I++S+
Sbjct: 181 ITHGLVKGISSVNSKGFHMFVTNCENVRLRKLHLTAPEDSPNTDGIHLSRSNNIKISRSV 240

Query: 241 IATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGIIVRNCTLINTDNG 300
           IATGDDCIS+GRGSMNV I +I CGPGHGIS+GSLGKYPNEEDVRGI+V+NCTL++TDNG
Sbjct: 241 IATGDDCISLGRGSMNVAINKITCGPGHGISVGSLGKYPNEEDVRGIVVKNCTLLSTDNG 300

Query: 301 LRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCSKV-CKKPPSRVRISDVHFVN 360
           LRIKTW DSPPSAA GILFQDIN++NVKNPI+IDQ+YSCSK  C++PPSRV+ISDVH++N
Sbjct: 301 LRIKTWPDSPPSAASGILFQDINMVNVKNPILIDQEYSCSKTNCQRPPSRVKISDVHYIN 360

Query: 361 IKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDCTNAKVGYRGLQF 420
           +KG++ISPVAV+L CSK+FPCQNIEM N+NLKYSG PN K LPF + C+NAKVGYRGLQF
Sbjct: 361 VKGSSISPVAVQLKCSKQFPCQNIEMFNINLKYSGPPN-KELPFSAKCSNAKVGYRGLQF 420

Query: 421 PAPCK 424
           P PCK
Sbjct: 421 PPPCK 424

[Close]

BLAST of CmoCh06G015350 vs. TrEMBL
Match: D7SYA7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01900 PE=3 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 2.1e-133
Identity = 224/377 (59.42%), Postives = 284/377 (75.33%), Query Frame = 1


Query: 48  EAVFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNT 107
           E +FNVL +GAK GG KD+T+ FMK WVAAC  +  AR++IP G+FLI Q+ F GPC + 
Sbjct: 53  ETIFNVLQYGAKPGGKKDSTEAFMKAWVAACHWRGKARLLIPQGIFLIGQVTFQGPCNSP 112

Query: 108 EPIVVQIDATLKGGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQN 167
            PI+VQ+ ATLK   D+SE+ S EW+ FE INGLIVTG GT DGQG  VWKYNDC  N N
Sbjct: 113 TPIIVQVAATLKAVTDISEFASPEWVTFEDINGLIVTGGGTFDGQGDVVWKYNDCRRNSN 172

Query: 168 CQKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHL 227
           CQ LP S K N I +G ++G+ S+N+K  H+ +   +N R   LH+ AP+DSPNTDGIH+
Sbjct: 173 CQLLPTSIKFNSITNGNLRGINSVNAKSFHIAMNRCQNFRAFGLHITAPEDSPNTDGIHI 232

Query: 228 SRSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGII 287
           S S  V+++KSII+TGDDCIS+G+GS N+ I ++ CGPGHGISIGSLGKYP+E+DV GII
Sbjct: 233 SSSNFVKVSKSIISTGDDCISIGQGSTNISINKVTCGPGHGISIGSLGKYPDEKDVIGII 292

Query: 288 VRNCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCS-KVCKKPP 347
           V+N TL+NTDNGLRIKTW  SPPS A GILFQDI + NVKNPIIIDQ Y  S   C+  P
Sbjct: 293 VKNSTLMNTDNGLRIKTWPGSPPSQASGILFQDIIMKNVKNPIIIDQLYCPSGSSCRTQP 352

Query: 348 SRVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDC 407
           SRVRIS++H+ NI+GT+ SP+ V L+CS +FPCQN+E+ ++NL+YSG+    AL   S C
Sbjct: 353 SRVRISNIHYRNIRGTSSSPLGVNLMCSPQFPCQNVELFDINLRYSGKRRVSAL--TSSC 412

Query: 408 TNAKVGYRGLQFPAPCK 424
           +N K G+ G+Q P PC+
Sbjct: 413 SNVKAGFGGVQIPPPCR 427

[Close]

BLAST of CmoCh06G015350 vs. TrEMBL
Match: A5AMR9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012014 PE=3 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 5.5e-129
Identity = 219/369 (59.35%), Postives = 277/369 (75.07%), Query Frame = 1


Query: 48  EAVFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNT 107
           E +FNVL +GAK GG KD+T+ FMK WVAAC  +  AR++IP G+FLI Q+ F GPC + 
Sbjct: 53  ETIFNVLQYGAKPGGKKDSTEAFMKAWVAACHWRGKARLLIPQGIFLIGQVTFQGPCNSP 112

Query: 108 EPIVVQIDATLKGGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQN 167
            PI+VQ+ ATLK   D+SE+ S EW+ FE INGLIVTG GT DGQG  VWKYNDC  N N
Sbjct: 113 TPIIVQVAATLKAVTDISEFASPEWVTFEDINGLIVTGGGTFDGQGDVVWKYNDCRRNSN 172

Query: 168 CQKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHL 227
           CQ LP S K N I +G ++G+ S+N+K  H+ +   +N R   L + AP+DSPNTDGIH+
Sbjct: 173 CQLLPTSIKFNSITNGNLRGINSVNAKSFHIAMNRCQNFRAFGLXITAPEDSPNTDGIHI 232

Query: 228 SRSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGII 287
           S S  V+++KSII+TGDDCIS+G+GS N+ I ++ CGPGHGISIGSLGKYP+E+DV GII
Sbjct: 233 SSSNFVKVSKSIISTGDDCISIGQGSTNISINKVTCGPGHGISIGSLGKYPDEKDVMGII 292

Query: 288 VRNCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCS-KVCKKPP 347
           V+N TL+NTDNGLRIKTW  SPPS A GILFQDI + NVKNPIIIDQ Y  S   C+  P
Sbjct: 293 VKNSTLMNTDNGLRIKTWPGSPPSQASGILFQDIIMKNVKNPIIIDQLYCPSGSSCRTQP 352

Query: 348 SRVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDC 407
           SRVRIS++H+ NI+GT+ SP+ V L+CS +FPCQN+E+ ++NL+YSG+    AL   S C
Sbjct: 353 SRVRISNIHYRNIRGTSSSPLGVNLMCSPQFPCQNVELFDINLRYSGKRRVSAL--TSSC 412

Query: 408 TNAKVGYRG 416
           +N K G+ G
Sbjct: 413 SNVKAGFGG 419

[Close]

BLAST of CmoCh06G015350 vs. TrEMBL
Match: W9S2T1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005247 PE=3 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 9.3e-129
Identity = 218/393 (55.47%), Postives = 282/393 (71.76%), Query Frame = 1


Query: 29  PSTPDPFSSISL--NSITHRKEAVFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARV 88
           P  PD F   +L  +      E +FNVLSFGAK GG KDNT+ FM+TWVAAC  K  ARV
Sbjct: 105 PPAPDTFRGTNLAHHERADPTEKIFNVLSFGAKPGGRKDNTEAFMQTWVAACHYKGKARV 164

Query: 89  VIPSGVFLINQIVFAGPCRNTEPIVVQIDATLKGGVDVSEYVSAEWILFEKINGLIVTGR 148
            IP G++ +  + FAGPC    PI+V I  TLK   D+S Y   +W LFE INGL+V G 
Sbjct: 165 FIPPGIYKLGPVTFAGPCGGRGPIIVHIQGTLKADTDISLYDEPQWFLFEAINGLVVIGS 224

Query: 149 GTLDGQGSKVWKYNDCHVNQNCQKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENI 208
           GT DGQG   WKYNDCH N +C +LP + KLN + +G+++G TS NSKG H+FIT  +NI
Sbjct: 225 GTFDGQGESAWKYNDCHNNNDCVQLPSNIKLNKVTNGVLRGFTSANSKGVHIFITQCQNI 284

Query: 209 RVRKLHLIAPDDSPNTDGIHLSRSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPG 268
           R+R+LH+ AP  SPNTDG+H+S S NVRI++++I TGDDCI + +GS N+ I ++ CGPG
Sbjct: 285 RLRRLHVFAPATSPNTDGVHISNSNNVRISRTVIRTGDDCIGMIKGSTNIAINKVICGPG 344

Query: 269 HGISIGSLGKYPNEEDVRGIIVRNCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINV 328
           HGIS+GSLGKY NEEDVRGIIV+N T + TDNG+RIKTW  S PS A G++FQD+ + NV
Sbjct: 345 HGISVGSLGKYENEEDVRGIIVKNTTFLKTDNGIRIKTWPGSTPSQASGMIFQDLFMDNV 404

Query: 329 KNPIIIDQQYSCSKVCKKPPSRVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSN 388
           +NPIIIDQ Y C   CKK PSRV+IS+VH++N++GT+ S VAV  +CS ++PC NI + N
Sbjct: 405 RNPIIIDQGY-CPSGCKKQPSRVKISNVHYINVRGTSSSDVAVDFMCSPQYPCDNIHLYN 464

Query: 389 VNLKYSGRPNDKALPFRSDCTNAKVGYRGLQFP 420
           ++LKY+G+      P  + C+NA+VGY GL  P
Sbjct: 465 IDLKYTGKG-----PATATCSNARVGYGGLINP 491

[Close]

BLAST of CmoCh06G015350 vs. TrEMBL
Match: B9HXS2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s01460g PE=3 SV=2)

HSP 1 Score: 431.0 bits (1107), Expect = 1.6e-117
Identity = 207/376 (55.05%), Postives = 266/376 (70.74%), Query Frame = 1


Query: 48  EAVFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNT 107
           E VFNVL +GAK GG +D+  +F++ W AAC  +  AR++IP G FLI   +F GPC   
Sbjct: 45  EKVFNVLQYGAKPGGKQDSALSFIRAWRAACNYRGTARLLIPMGTFLIGATIFQGPCLGP 104

Query: 108 EPIVVQIDATLKGGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQN 167
            PI VQI  TLK   D S Y    WILFEKINGL+VTG GT+DGQG+ VWKYND      
Sbjct: 105 VPIKVQIAGTLKAVPDPSMYEEDFWILFEKINGLLVTGTGTVDGQGNAVWKYND-----G 164

Query: 168 CQKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHL 227
             + P S K N + +G+++ +TS+N  G H+ I  S+NIR + LH+ AP  SPNTDGIH+
Sbjct: 165 GSRFPSSIKFNHVVNGIIRQITSVNPMGFHISIVLSQNIRAKNLHITAPATSPNTDGIHI 224

Query: 228 SRSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGII 287
           S+S+ V++++S+I+TGDDC+++ +GS +V I ++ CGPGHG S+GSLGKYP+E+DVRG++
Sbjct: 225 SQSSVVKVSRSVISTGDDCVAIIQGSTDVSIKKVTCGPGHGFSVGSLGKYPDEKDVRGVV 284

Query: 288 VRNCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCSKVCKKPPS 347
           V NCTL N DNG+RIKTW  SPPS A  ILFQDI + NVK PIIIDQ Y         PS
Sbjct: 285 VTNCTLRNADNGVRIKTWGGSPPSQASNILFQDIIMDNVKRPIIIDQTYGSK---SNSPS 344

Query: 348 RVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDCT 407
           RV+ISDV ++NI+GT+ S VAV L+CSK  PC+ +  SN+NLKY G+   K LPF S CT
Sbjct: 345 RVKISDVRYINIRGTSASAVAVDLMCSKTVPCEKLYFSNINLKYYGQ---KKLPFTSTCT 404

Query: 408 NAKVGYRGLQFPAPCK 424
           NAKV Y G QFP PC+
Sbjct: 405 NAKVNYAGYQFPPPCR 409

[Close]

BLAST of CmoCh06G015350 vs. TAIR10
Match: AT1G02790.1 (AT1G02790.1 polygalacturonase 4)

HSP 1 Score: 350.1 bits (897), Expect = 1.9e-96
Identity = 173/378 (45.77%), Postives = 239/378 (63.23%), Query Frame = 1


Query: 50  VFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRN--T 109
           V+++  FGA   G+ +  + F+ TW+  C S  PA +++P G FL   ++FAGPC++  T
Sbjct: 51  VYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVT 110

Query: 110 EPIVVQIDATLKGGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQN 169
             ++  I AT  G      Y + EW LFE+++ L++TG GT  G+G  VWK + C     
Sbjct: 111 VNVIGTIIATTSG------YATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQ 170

Query: 170 CQKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHL 229
           C   P S K   +++  + G++S+N+K  HMF+  +EN+ ++ + L AP +SPNTDGIHL
Sbjct: 171 CNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHL 230

Query: 230 SRSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGII 289
           S + NV I  S IATGDDC+SVGRGS NV + ++ CGPGHG+S+GSLGKY NEEDV GI 
Sbjct: 231 SNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIH 290

Query: 290 VRNCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCSKVCKKPPS 349
           V NCT+I TDNGLRIKTW  S PS AV I F++I + +VKNPIIIDQ Y      +   S
Sbjct: 291 VNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYG----SRGGDS 350

Query: 350 RVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSD-- 409
           +V ISD+ F NI+GTTI+   V+++CSK  PCQ + + +VNL Y G+   +         
Sbjct: 351 QVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGKTGGEKKSSSGGLV 410

Query: 410 ---CTNAKVGYRG-LQFP 420
              C NA V + G L FP
Sbjct: 411 GALCDNANVIFGGKLSFP 418

[Close]

BLAST of CmoCh06G015350 vs. TAIR10
Match: AT4G18180.1 (AT4G18180.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 345.9 bits (886), Expect = 3.5e-95
Identity = 173/391 (44.25%), Postives = 251/391 (64.19%), Query Frame = 1


Query: 47  KEAVF--NVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPA-RVVIPSGVFLINQIVFAGP 106
           K +VF  +V SFGA+    +D+T+ F+  W  AC+S   +  ++IP G F +  + F+GP
Sbjct: 29  KSSVFLVDVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGP 88

Query: 107 CRNTEPIVVQIDATLKGGVDVSEYVSAE-WILFEKINGLIVTGRGTLDGQGSKVWKYNDC 166
           C N   + V++    K   D+S+Y S   WI F  INGL +TG GT DGQG+  W +N+C
Sbjct: 89  CTNVSNLTVRV----KASTDLSKYRSGGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNC 148

Query: 167 HVNQNCQKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNT 226
             + NC+ LP S K  G+   +V+ ++S+NSK  H+ +    + +  +L++ AP DSPNT
Sbjct: 149 TSDSNCKLLPTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNT 208

Query: 227 DGIHLSRSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEED 286
           DGIH+ RS+NV  ++S IATGDDC+S+G+G+  + IT IKCGPGHGIS+GSLG+YPNE+D
Sbjct: 209 DGIHIERSSNVYFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKD 268

Query: 287 VRGIIVRNCTLINTDNGLRIKTWADSPP-SAAVGILFQDINLINVKNPIIIDQQYSCSKV 346
           V G++V++C +  T NG+RIKTWA+SP  SAA  + F++I + NV NPIIIDQ Y     
Sbjct: 269 VNGLVVKDCKISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSS 328

Query: 347 C-KKPPSRVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNL---------KY 406
           C    PS+V +S+++F NI+GT+ S VAV+L CS+  PC+ + + NV+L         K 
Sbjct: 329 CISNVPSKVELSEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQ 388

Query: 407 SGRPNDKALPFRSDCTNAKVGYRGLQFPAPC 423
           S    ++A+   S C N +  Y G Q P PC
Sbjct: 389 SSNRGNEAV--SSSCRNVRANYIGTQIPPPC 413

[Close]

BLAST of CmoCh06G015350 vs. TAIR10
Match: AT3G14040.1 (AT3G14040.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 317.8 bits (813), Expect = 1.0e-86
Identity = 160/377 (42.44%), Postives = 228/377 (60.48%), Query Frame = 1


Query: 49  AVFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNTE 108
           A  +V + GAK  G  D++  F   W  AC +   + + +P G +L+  + F GPC+   
Sbjct: 69  ASLDVKASGAKGDGKTDDSAAFAAAWKEACAAG--STITVPKGEYLVESLEFKGPCKG-- 128

Query: 109 PIVVQIDATLKGGVDV-SEYVSAEWILFEKINGLIVTG-RGTLDGQGSKVWKYNDCHVNQ 168
           P+ ++++   K    V +    A WI FE +    + G +   DGQGS  WK NDC    
Sbjct: 129 PVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTG 188

Query: 169 NCQKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIH 228
            C  LP++ +  G+ +  +  +TS NSK  HM I N +NI +  + + AP +S NTDGIH
Sbjct: 189 KCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIH 248

Query: 229 LSRSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGI 288
           + RS  V +  + I TGDDC+S+G G+ N+++  ++CGPGHGISIGSLG+YPNE+ V+G+
Sbjct: 249 IGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGV 308

Query: 289 IVRNCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCSKVCKK-P 348
            VR C + NTDNG+RIKTW  SPP  A  ILF+DI + NV  P++IDQ+Y     CK   
Sbjct: 309 TVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGV 368

Query: 349 PSRVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSD 408
           PS+V++SDV   NIKGT+ + VAVKL+CSK  PC NI +S++NL ++G+      P  S 
Sbjct: 369 PSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEG----PAVSA 428

Query: 409 CTNAKVGYRGLQFPAPC 423
           C+N K    G   PA C
Sbjct: 429 CSNIKPILSGKLVPAAC 437

[Close]

BLAST of CmoCh06G015350 vs. TAIR10
Match: AT3G07820.1 (AT3G07820.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 317.4 bits (812), Expect = 1.3e-86
Identity = 156/372 (41.94%), Postives = 236/372 (63.44%), Query Frame = 1


Query: 53  VLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNTEPIVV 112
           V + G+  G   D TQ  +K + +AC+S  P++VVIP G F + +I   GPC+   PI V
Sbjct: 24  VFTIGSSSGS--DITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCK--APIEV 83

Query: 113 QIDATLKGGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQNCQKLP 172
            +  T+K   +  +    +W++F  I+G  + G G  DG+G+  W+ N+CH    C+KLP
Sbjct: 84  TLQGTVKADGNAIQG-KEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLP 143

Query: 173 VSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHLSRSTN 232
           +S + + I +  ++ ++S+++K  H+ +  ++N+ +  + ++AP+DSPNTDGIHL RS  
Sbjct: 144 ISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDG 203

Query: 233 VRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGIIVRNCT 292
           V+I  S I+TGDDCISVG G  N+ + ++ CGPGHGIS+GSLG+Y +E+DV GI V NCT
Sbjct: 204 VKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCT 263

Query: 293 LINTDNGLRIKTWADSPPS-AAVGILFQDINLINVKNPIIIDQQYSCSKVC-KKPPSRVR 352
           L  TDNGLRIKTW  +  S  A  I F+DI L +V NPI+IDQ+Y     C K+  S ++
Sbjct: 264 LQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIK 323

Query: 353 ISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDCTNAK 412
           + ++ F NI+GT+ +  AVKL+CSK +PCQN+E+ ++++KY+G       P    C+N  
Sbjct: 324 LVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADG----PATFHCSNVS 383

Query: 413 VGYRGLQFPAPC 423
               G Q P  C
Sbjct: 384 PKILGSQSPKAC 386

[Close]

BLAST of CmoCh06G015350 vs. TAIR10
Match: AT3G07850.1 (AT3G07850.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 313.2 bits (801), Expect = 2.5e-85
Identity = 158/377 (41.91%), Postives = 226/377 (59.95%), Query Frame = 1


Query: 49  AVFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNTE 108
           A  +V + GAK     D++  F   W  AC +   + + +P G +++  + F GPC+   
Sbjct: 68  AAVDVKASGAKGDSKTDDSAAFAAAWKEACAAG--STITVPKGEYMVESLEFKGPCKG-- 127

Query: 109 PIVVQIDATLKGGVDV-SEYVSAEWILFEKINGLIVTG-RGTLDGQGSKVWKYNDCHVNQ 168
           P+ ++++   K    V +    A WI FE I    + G +   DGQGS  WK NDC    
Sbjct: 128 PVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTG 187

Query: 169 NCQKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIH 228
            C  LP++ +  G+ +  +  +TS NSK  HM I N +NI +  + + AP +S NTDGIH
Sbjct: 188 KCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIH 247

Query: 229 LSRSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGI 288
           + RS  V +  + I TGDDC+S+G G+ N+++  ++CGPGHGISIGSLG+YPNE+ V+G+
Sbjct: 248 IGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGV 307

Query: 289 IVRNCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCSKVCKK-P 348
            VR C + NTDNG+RIKTW  SPP  A  ILF+DI + NV  P++IDQ+Y     CK   
Sbjct: 308 TVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGV 367

Query: 349 PSRVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSD 408
           PS+V++SDV    IKGT+ + VAVKL+CSK  PC NI +S++NL ++G+      P  S 
Sbjct: 368 PSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEG----PAVSA 427

Query: 409 CTNAKVGYRGLQFPAPC 423
           C+N K    G   PA C
Sbjct: 428 CSNIKPILSGKLVPAAC 436

[Close]

BLAST of CmoCh06G015350 vs. NCBI nr
Match: gi|449433417|ref|XP_004134494.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 662.5 bits (1708), Expect = 4.8e-187
Identity = 313/425 (73.65%), Postives = 365/425 (85.88%), Query Frame = 1


Query: 1   MNSSSKLPVLLGLFLASFVAAKAKALIGPSTPDPFSSISLNS-ITHRKEAVFNVLSFGAK 60
           M+S  K  +LL L L + VA  AK L GP +PDPF +++L   I HRKE VFNVLSFGAK
Sbjct: 1   MSSVFKQLILLTLLLVALVAVDAKLLAGPISPDPFLNVNLGKDIKHRKETVFNVLSFGAK 60

Query: 61  LGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNTEPIVVQIDATLK 120
             G  DN+++FMKTWVAAC SK  ARVVIP G FLINQI FAGPC +T PI+VQIDATLK
Sbjct: 61  PDGKTDNSESFMKTWVAACHSKGAARVVIPRGTFLINQIAFAGPCASTSPIIVQIDATLK 120

Query: 121 GGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQNCQKLPVSFKLNG 180
           GGVD+S Y S EWILFEKINGLIVTGRG LDGQGS VW+YNDC +N NCQKLPV+ KLN 
Sbjct: 121 GGVDISNYFSDEWILFEKINGLIVTGRGALDGQGSAVWEYNDCGMNPNCQKLPVNLKLNN 180

Query: 181 IRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHLSRSTNVRITKSI 240
           I HGLVKG++S+NSKG HMF+TN EN+R+RKLHL AP+DSPNTDGIHLSRS N++I++S+
Sbjct: 181 ITHGLVKGISSVNSKGFHMFVTNCENVRLRKLHLTAPEDSPNTDGIHLSRSNNIKISRSV 240

Query: 241 IATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGIIVRNCTLINTDNG 300
           IATGDDCIS+GRGSMNV I +I CGPGHGIS+GSLGKYPNEEDVRGI+V+NCTL++TDNG
Sbjct: 241 IATGDDCISLGRGSMNVAINKITCGPGHGISVGSLGKYPNEEDVRGIVVKNCTLLSTDNG 300

Query: 301 LRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCSKV-CKKPPSRVRISDVHFVN 360
           LRIKTW DSPPSAA GILFQDIN++NVKNPI+IDQ+YSCSK  C++PPSRV+ISDVH++N
Sbjct: 301 LRIKTWPDSPPSAASGILFQDINMVNVKNPILIDQEYSCSKTNCQRPPSRVKISDVHYIN 360

Query: 361 IKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDCTNAKVGYRGLQF 420
           +KG++ISPVAV+L CSK+FPCQNIEM N+NLKYSG PN K LPF + C+NAKVGYRGLQF
Sbjct: 361 VKGSSISPVAVQLKCSKQFPCQNIEMFNINLKYSGPPN-KELPFSAKCSNAKVGYRGLQF 420

Query: 421 PAPCK 424
           P PCK
Sbjct: 421 PPPCK 424

[Close]

BLAST of CmoCh06G015350 vs. NCBI nr
Match: gi|659076875|ref|XP_008438909.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 658.3 bits (1697), Expect = 9.1e-186
Identity = 313/425 (73.65%), Postives = 364/425 (85.65%), Query Frame = 1


Query: 1   MNSSSKLPVLLGLFLASFVAAKAKALIGPSTPDPFSSISLNS-ITHRKEAVFNVLSFGAK 60
           M+S  K  +LL L L + VA  AK L GP  PDPF +++L   I HRKE VFNVLSFGAK
Sbjct: 1   MSSFFKQVILLTLLLVALVAVDAKLLPGPILPDPFRNVNLGKDIKHRKETVFNVLSFGAK 60

Query: 61  LGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNTEPIVVQIDATLK 120
             G  DNT++FMKTWVAAC SK  ARVVIPSG FLINQ+ FAGPC +T PIVVQIDATLK
Sbjct: 61  PDGKTDNTESFMKTWVAACHSKGAARVVIPSGTFLINQVAFAGPCASTSPIVVQIDATLK 120

Query: 121 GGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQNCQKLPVSFKLNG 180
           GG+D+S Y S EWILFEKINGLIVTGRGTLDGQGS VW+YNDC +N NCQKLPV+ KL+G
Sbjct: 121 GGIDISNYFSDEWILFEKINGLIVTGRGTLDGQGSAVWEYNDCGMNPNCQKLPVNLKLSG 180

Query: 181 IRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHLSRSTNVRITKSI 240
           I HGLVKG++S+NSKG HMFITN EN+R+RKLH+ AP+ SPNTDGIH+SRS NV+I++S+
Sbjct: 181 ITHGLVKGISSVNSKGFHMFITNCENVRLRKLHITAPETSPNTDGIHVSRSNNVKISRSV 240

Query: 241 IATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGIIVRNCTLINTDNG 300
           IATGDDCIS+GRGSMN+ I +I CGPGHGIS+GSLGKY NEEDVRGIIV+NCTL+ TDNG
Sbjct: 241 IATGDDCISLGRGSMNIAINKITCGPGHGISVGSLGKYQNEEDVRGIIVKNCTLVKTDNG 300

Query: 301 LRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCSKV-CKKPPSRVRISDVHFVN 360
           LRIKTW DSPPSAA GILFQDIN+I+VKNPI+IDQ+YSCSK  C+KPPSRV+ISDVH++N
Sbjct: 301 LRIKTWPDSPPSAASGILFQDINMIDVKNPILIDQEYSCSKTNCQKPPSRVKISDVHYIN 360

Query: 361 IKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDCTNAKVGYRGLQF 420
           +KG++ISPVAV+L CSK+FPCQNIEM N+NLKY+G PN K LPF + C+NAKVGYRGLQF
Sbjct: 361 VKGSSISPVAVQLKCSKQFPCQNIEMFNINLKYTGPPN-KELPFIAQCSNAKVGYRGLQF 420

Query: 421 PAPCK 424
           P PCK
Sbjct: 421 PPPCK 424

[Close]

BLAST of CmoCh06G015350 vs. NCBI nr
Match: gi|225431792|ref|XP_002272193.1| (PREDICTED: exopolygalacturonase [Vitis vinifera])

HSP 1 Score: 483.8 bits (1244), Expect = 3.1e-133
Identity = 224/377 (59.42%), Postives = 284/377 (75.33%), Query Frame = 1


Query: 48  EAVFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNT 107
           E +FNVL +GAK GG KD+T+ FMK WVAAC  +  AR++IP G+FLI Q+ F GPC + 
Sbjct: 53  ETIFNVLQYGAKPGGKKDSTEAFMKAWVAACHWRGKARLLIPQGIFLIGQVTFQGPCNSP 112

Query: 108 EPIVVQIDATLKGGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQN 167
            PI+VQ+ ATLK   D+SE+ S EW+ FE INGLIVTG GT DGQG  VWKYNDC  N N
Sbjct: 113 TPIIVQVAATLKAVTDISEFASPEWVTFEDINGLIVTGGGTFDGQGDVVWKYNDCRRNSN 172

Query: 168 CQKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHL 227
           CQ LP S K N I +G ++G+ S+N+K  H+ +   +N R   LH+ AP+DSPNTDGIH+
Sbjct: 173 CQLLPTSIKFNSITNGNLRGINSVNAKSFHIAMNRCQNFRAFGLHITAPEDSPNTDGIHI 232

Query: 228 SRSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGII 287
           S S  V+++KSII+TGDDCIS+G+GS N+ I ++ CGPGHGISIGSLGKYP+E+DV GII
Sbjct: 233 SSSNFVKVSKSIISTGDDCISIGQGSTNISINKVTCGPGHGISIGSLGKYPDEKDVIGII 292

Query: 288 VRNCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCS-KVCKKPP 347
           V+N TL+NTDNGLRIKTW  SPPS A GILFQDI + NVKNPIIIDQ Y  S   C+  P
Sbjct: 293 VKNSTLMNTDNGLRIKTWPGSPPSQASGILFQDIIMKNVKNPIIIDQLYCPSGSSCRTQP 352

Query: 348 SRVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDC 407
           SRVRIS++H+ NI+GT+ SP+ V L+CS +FPCQN+E+ ++NL+YSG+    AL   S C
Sbjct: 353 SRVRISNIHYRNIRGTSSSPLGVNLMCSPQFPCQNVELFDINLRYSGKRRVSAL--TSSC 412

Query: 408 TNAKVGYRGLQFPAPCK 424
           +N K G+ G+Q P PC+
Sbjct: 413 SNVKAGFGGVQIPPPCR 427

[Close]

BLAST of CmoCh06G015350 vs. NCBI nr
Match: gi|147819171|emb|CAN69218.1| (hypothetical protein VITISV_012014 [Vitis vinifera])

HSP 1 Score: 469.2 bits (1206), Expect = 7.8e-129
Identity = 219/369 (59.35%), Postives = 277/369 (75.07%), Query Frame = 1


Query: 48  EAVFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARVVIPSGVFLINQIVFAGPCRNT 107
           E +FNVL +GAK GG KD+T+ FMK WVAAC  +  AR++IP G+FLI Q+ F GPC + 
Sbjct: 53  ETIFNVLQYGAKPGGKKDSTEAFMKAWVAACHWRGKARLLIPQGIFLIGQVTFQGPCNSP 112

Query: 108 EPIVVQIDATLKGGVDVSEYVSAEWILFEKINGLIVTGRGTLDGQGSKVWKYNDCHVNQN 167
            PI+VQ+ ATLK   D+SE+ S EW+ FE INGLIVTG GT DGQG  VWKYNDC  N N
Sbjct: 113 TPIIVQVAATLKAVTDISEFASPEWVTFEDINGLIVTGGGTFDGQGDVVWKYNDCRRNSN 172

Query: 168 CQKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENIRVRKLHLIAPDDSPNTDGIHL 227
           CQ LP S K N I +G ++G+ S+N+K  H+ +   +N R   L + AP+DSPNTDGIH+
Sbjct: 173 CQLLPTSIKFNSITNGNLRGINSVNAKSFHIAMNRCQNFRAFGLXITAPEDSPNTDGIHI 232

Query: 228 SRSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPGHGISIGSLGKYPNEEDVRGII 287
           S S  V+++KSII+TGDDCIS+G+GS N+ I ++ CGPGHGISIGSLGKYP+E+DV GII
Sbjct: 233 SSSNFVKVSKSIISTGDDCISIGQGSTNISINKVTCGPGHGISIGSLGKYPDEKDVMGII 292

Query: 288 VRNCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINVKNPIIIDQQYSCS-KVCKKPP 347
           V+N TL+NTDNGLRIKTW  SPPS A GILFQDI + NVKNPIIIDQ Y  S   C+  P
Sbjct: 293 VKNSTLMNTDNGLRIKTWPGSPPSQASGILFQDIIMKNVKNPIIIDQLYCPSGSSCRTQP 352

Query: 348 SRVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSNVNLKYSGRPNDKALPFRSDC 407
           SRVRIS++H+ NI+GT+ SP+ V L+CS +FPCQN+E+ ++NL+YSG+    AL   S C
Sbjct: 353 SRVRISNIHYRNIRGTSSSPLGVNLMCSPQFPCQNVELFDINLRYSGKRRVSAL--TSSC 412

Query: 408 TNAKVGYRG 416
           +N K G+ G
Sbjct: 413 SNVKAGFGG 419

[Close]

BLAST of CmoCh06G015350 vs. NCBI nr
Match: gi|703149381|ref|XP_010109588.1| (hypothetical protein L484_005247 [Morus notabilis])

HSP 1 Score: 468.4 bits (1204), Expect = 1.3e-128
Identity = 218/393 (55.47%), Postives = 282/393 (71.76%), Query Frame = 1


Query: 29  PSTPDPFSSISL--NSITHRKEAVFNVLSFGAKLGGTKDNTQNFMKTWVAACRSKQPARV 88
           P  PD F   +L  +      E +FNVLSFGAK GG KDNT+ FM+TWVAAC  K  ARV
Sbjct: 105 PPAPDTFRGTNLAHHERADPTEKIFNVLSFGAKPGGRKDNTEAFMQTWVAACHYKGKARV 164

Query: 89  VIPSGVFLINQIVFAGPCRNTEPIVVQIDATLKGGVDVSEYVSAEWILFEKINGLIVTGR 148
            IP G++ +  + FAGPC    PI+V I  TLK   D+S Y   +W LFE INGL+V G 
Sbjct: 165 FIPPGIYKLGPVTFAGPCGGRGPIIVHIQGTLKADTDISLYDEPQWFLFEAINGLVVIGS 224

Query: 149 GTLDGQGSKVWKYNDCHVNQNCQKLPVSFKLNGIRHGLVKGLTSLNSKGNHMFITNSENI 208
           GT DGQG   WKYNDCH N +C +LP + KLN + +G+++G TS NSKG H+FIT  +NI
Sbjct: 225 GTFDGQGESAWKYNDCHNNNDCVQLPSNIKLNKVTNGVLRGFTSANSKGVHIFITQCQNI 284

Query: 209 RVRKLHLIAPDDSPNTDGIHLSRSTNVRITKSIIATGDDCISVGRGSMNVVITQIKCGPG 268
           R+R+LH+ AP  SPNTDG+H+S S NVRI++++I TGDDCI + +GS N+ I ++ CGPG
Sbjct: 285 RLRRLHVFAPATSPNTDGVHISNSNNVRISRTVIRTGDDCIGMIKGSTNIAINKVICGPG 344

Query: 269 HGISIGSLGKYPNEEDVRGIIVRNCTLINTDNGLRIKTWADSPPSAAVGILFQDINLINV 328
           HGIS+GSLGKY NEEDVRGIIV+N T + TDNG+RIKTW  S PS A G++FQD+ + NV
Sbjct: 345 HGISVGSLGKYENEEDVRGIIVKNTTFLKTDNGIRIKTWPGSTPSQASGMIFQDLFMDNV 404

Query: 329 KNPIIIDQQYSCSKVCKKPPSRVRISDVHFVNIKGTTISPVAVKLVCSKRFPCQNIEMSN 388
           +NPIIIDQ Y C   CKK PSRV+IS+VH++N++GT+ S VAV  +CS ++PC NI + N
Sbjct: 405 RNPIIIDQGY-CPSGCKKQPSRVKISNVHYINVRGTSSSDVAVDFMCSPQYPCDNIHLYN 464

Query: 389 VNLKYSGRPNDKALPFRSDCTNAKVGYRGLQFP 420
           ++LKY+G+      P  + C+NA+VGY GL  P
Sbjct: 465 IDLKYTGKG-----PATATCSNARVGYGGLINP 491

The following BLAST results are available for this feature:

BLAST of CmoCh06G015350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PGLR2_PLAAC	2.3e-96	45.84	Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1	[more]
PGLR1_ARATH	3.3e-95	45.77	Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1	[more]
PGLR_GOSHI	4.3e-87	42.86	Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1	[more]
PGLR_GOSBA	1.7e-86	42.59	Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1	[more]
PGLR_TOBAC	3.1e-85	42.25	Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1	[more]

BLAST of CmoCh06G015350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAM9_CUCSA	3.4e-187	73.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G164550 PE=3 SV=1	[more]
D7SYA7_VITVI	2.1e-133	59.42	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01900 PE=3 SV=...	[more]
A5AMR9_VITVI	5.5e-129	59.35	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012014 PE=3 SV=1	[more]
W9S2T1_9ROSA	9.3e-129	55.47	Uncharacterized protein OS=Morus notabilis GN=L484_005247 PE=3 SV=1	[more]
B9HXS2_POPTR	1.6e-117	55.05	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s01460g PE=3 SV=2	[more]

BLAST of CmoCh06G015350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02790.1	1.9e-96	45.77	polygalacturonase 4	[more]
AT4G18180.1	3.5e-95	44.25	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	1.0e-86	42.44	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	1.3e-86	41.94	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	2.5e-85	41.91	Pectin lyase-like superfamily protein	[more]

BLAST of CmoCh06G015350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433417\|ref\|XP_004134494.1\|	4.8e-187	73.65	PREDICTED: exopolygalacturonase-like [Cucumis sativus]	[more]
gi\|659076875\|ref\|XP_008438909.1\|	9.1e-186	73.65	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]
gi\|225431792\|ref\|XP_002272193.1\|	3.1e-133	59.42	PREDICTED: exopolygalacturonase [Vitis vinifera]	[more]
gi\|147819171\|emb\|CAN69218.1\|	7.8e-129	59.35	hypothetical protein VITISV_012014 [Vitis vinifera]	[more]
gi\|703149381\|ref\|XP_010109588.1\|	1.3e-128	55.47	hypothetical protein L484_005247 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000743	Glyco_hydro_28
IPR006626	PbH1
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G015350.1	CmoCh06G015350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 78..409 score: 3.3
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 283..304 score: 4.0coord: 346..368 score: 4900.0coord: 203..229 score: 800.0coord: 230..251 score: 590.0coord: 313..334 score: 74
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 44..422 score: 2.51E
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 42..422 score: 1.5E
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 48..422 score: 8.8E
None	No IPR available	PANTHER	PTHR31375:SF16	SUBFAMILY NOT NAMED	coord: 48..422 score: 8.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G015350	Cucsa.252840	Cucumber (Gy14) v1	cgycmoB0718
CmoCh06G015350	CmaCh14G016080	Cucurbita maxima (Rimu)	cmacmoB271
CmoCh06G015350	CmaCh06G015400	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G015350	Cla021762	Watermelon (97103) v1	cmowmB793
CmoCh06G015350	Csa3G164550	Cucumber (Chinese Long) v2	cmocuB806
CmoCh06G015350	MELO3C006686	Melon (DHL92) v3.5.1	cmomeB755
CmoCh06G015350	CSPI03G14670	Wild cucumber (PI 183967)	cmocpiB814
CmoCh06G015350	Lsi05G015610	Bottle gourd (USVL1VR-Ls)	cmolsiB752
CmoCh06G015350	Cp4.1LG03g11630	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G015350	Cp4.1LG08g05080	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G015350	MELO3C031616.2	Melon (DHL92) v3.6.1	cmomedB857
CmoCh06G015350	CsaV3_3G014910	Cucumber (Chinese Long) v3	cmocucB0953
CmoCh06G015350	Cla97C05G087840	Watermelon (97103) v2	cmowmbB833
CmoCh06G015350	Bhi01G000747	Wax gourd	cmowgoB1005
CmoCh06G015350	CsGy3G014810	Cucumber (Gy14) v2	cgybcmoB401
CmoCh06G015350	Carg23757	Silver-seed gourd	carcmoB1276
CmoCh06G015350	Carg19650	Silver-seed gourd	carcmoB0390

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh06G015350	CmoCh14G016460	Cucurbita moschata (Rifu)	cmocmoB224

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G015350	Watermelon (Charleston Gray)	cmowcgB743