CmoCh06G011970 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G011970
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr06 : 9106876 .. 9109954 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCCGATTTTCCTCCTCTTTTCGGATGCCCGATTTCCATGGAGCTCATGGAGGATCCCGTCACCATCTCCACCGGCGTCACCTACGAGAGAAAAAGCATCGAAAAATGGCTCTTCACTTACAACAACAAAACCTGTCCGGCGACGATGCAGACCCTCGCCGCTGGCGACTTCGTCATTACTCCTAATCTCACTCTCAAACGCCTCATTCTCGCTTGGAAGATTACTGATTCTTCTGCGTCGCCGGCGACGATCGAGGAAGTCCGATCGCTGCTTGCGACTGTTGAGTCTTCTCCATTCAAGGTGAGTTCGTTGAGGAAATTGAGATCGATGATTGAAACGAGCGATGAGATGAAATCGGAATTTGTTCGATTGAATGGGATTGGAATTGTTGTGAATGTTGTCGTTCAAATTCTCATTGATTGTTCTGATTTTTGGACGTTTGAAGCTTGTGAAGAGGCTGTGGGAGTGTTGTCTCAGCTTCCGATTTCGAACGAAGACAAACTGTTCGACGAAATGTCTAAGAGAGAAGAATTGATGAAATCCATCGCTATTGTTCTTCAAAGGGGAAGTGCTGAAGGCCGTTTTTACGCTGTGAAAATCCTAAGAAATATTGCTAAGAACACCAATTTCAATTGGGGCTCTGTTTTGGAAGAACAGGGGATTGATTTCTTCAAGCCATTGTTGGAGCTTGTATCAGACGAATTCTCCACAAAGGCAAGCTCGTGCACATTGGATGTAATGATGGAAATTTTAGCATTGTCAAAGAGAAGTCGAGTGAAGGCGATCGAGGCCGGTGCTGTGTGCATCCTCATCGAGCTCTTACCGGAGTCGGGTCGATCGAAATGCGAGCGAATGCTGCAGATTCTGCAGAGTTTGTGTGAATGTGCAGAGGGGAGATTGGCTTTGGTGGAACATGGGATGGGAATTGCAGCAGTGACTAAGAAGATTTTGAATGTTTCAAACGTAGCAACAAAAATGGGAGTGAAGATTTTGCTTTGGATTAGTAGTTTTCACCCCAATGAAAGGGTTGTGGAAGAGATGATGGCTTGTGGGGTAGTGAAGAAGCTGATGATGATATTGCACATGGACGGCGGCGGTGGCGGCGGCGGCGGTGGCCGGAGTTCGACGAAGGAGAAGGCGATCAAGATTTTGAAGATGCATGGGAGCTCATGGAGGCGTAGCCCTTGTTTTCCAAGTGAGTTGAAGAATTATTTGATGTTTGTGAATATCGAATGATATATTGTTCTTCCTAAACAAATCAACATACCATAGGGAAAGGAAAATTAAGTATTTTTTGTCACATTTTTGCTCAAAGTTAATTGTTTTTTTTTTTTTTTTTGGGGGGAATATATAGTAATTGAATTGGGTGGTTTCCATGATAATTTGATTGATTTTTGTTTTCGAGTTTATGGGTTTTTGTAGAACGGTTTGAATTCATCTAATTACGAGTTTAATTCAACTTTTGAAATTTGAGTTAATACCCGACTTATAAAGCTATAACATATACAAGATTAAAAAGTTATACAAGATTAAAAAGTTATGATTTCTATTAGACATAATTTTTTTTTTTTTTTTTTTTTACCATGAATTCTCGAAAATGCTTACTTTAGTGTAATTTTATTAGATAAATTTAATTTTTAACAAACTAAAAAAACAAAATAACCATTAAATTTACATACGGGGACTGATGAAGGATACATATTGGTTTAATATTTTAATTTTGGGCACTTGAAATAACGTAATTGGCCGTAATACTAATAAACATTTAAGGTATTAAGGATTAAAAAAAAAGGGTTTAATATCTATCTTTCTTTGCAATTCTACTCATTTTACCTCAAACAAATAGTGAAACCCCACTTCATCAAATCATTTAAAATAAAGTGCTTCTGCTGGAAGCAAGAACAAAGTGCATATCAGCATTGATTATATCCCATCAACCCAACCAATTTACTCATCAGACTTCAAATGTTGGAAGTAATTTAATGAGGTAATTCATGGGTGTGTCGGTAGAAAAATAAAGGACGGGTTATATTTAAGTTATTACGATCTCACCATCCACCTCTTGGGGTCCAGCGTCCTACCCAGTACATCGTCTGGTGTCTGGTTTTGATATCATTTGTAACAGCTCAAGCCCACTACTGGTAGATATTGTCCACTTTGGCCCATTATTCAGCCTCACGGTTTTAAAATGCATCTACATATTGTCCACTTTGGCCCATTATTTAGCCTCACGGTTTTAAAACGCGTCTATTAGGAAACGGTTTTCACACCCTTATAAGGAATGTTTTGTTTCCCTCTCCAATCGAGGTTGGATCACTTTCCTTTGGGAAATTTTTTAGATCAAATATTTTCTTAATGAAGGTTATGGTCAAGAGATTCCTTCATATATTTCTTACAAACCAGCCCACTCCAAAACAGTCTCAAAATCAACCAAAAACCAAACCCTATCTTTCCCATTCTTAGAAAGAAGCAACAAAATGGACACAATCAACAAAATTTAAGCAATTTCATGCACAAAATGGTAGTTAATGGCTTCATCCACCATAAGCCATCACTTAACAAGCTCATTGCCCATGTCCTCTCAATGGGCTCGCCTGGTCTTGCCTATGCTTATTCAGTTTTTTCACACACTCAAGAGTTGGATATACTTACTTGGAACACCATGTTGAGAGGCCTTGTGAATTCCAACATGCCGAGAAGGGCACTCCATAGTTACTTTGAGATGCTTCAATGGTCGAGAAATGTTGCTGATAGATTCACATTTCCTTCACTGCTGAAGGTTTGTGCCCTTTCATTGGAACTCAAAGTTGGGAAGTATATGCTTGATTCCGACCTGTACATAGAAACCACATTGTTAAATATGTATGCTGCCTGTGGGGATTTGAACTCCGCGAAGGTTTTGTTTGAGAAAATGGGTCATAGAAACGAAGTGGTTTGGACTTTGATGATTAGTGGTTGTACGAAAAACCATTGTCCTAATGAGGCATTTCTTTTGTATGAGAAAAATGGAGGAAGATGGATTTACTCCGATGAAGTGACCATGGCAACACTCGTACGGCTTGTGCTCAATTGA

mRNA sequence

ATGGATTCCGATTTTCCTCCTCTTTTCGGATGCCCGATTTCCATGGAGCTCATGGAGGATCCCGTCACCATCTCCACCGGCGTCACCTACGAGAGAAAAAGCATCGAAAAATGGCTCTTCACTTACAACAACAAAACCTGTCCGGCGACGATGCAGACCCTCGCCGCTGGCGACTTCGTCATTACTCCTAATCTCACTCTCAAACGCCTCATTCTCGCTTGGAAGATTACTGATTCTTCTGCGTCGCCGGCGACGATCGAGGAAGTCCGATCGCTGCTTGCGACTGTTGAGTCTTCTCCATTCAAGGTGAGTTCGTTGAGGAAATTGAGATCGATGATTGAAACGAGCGATGAGATGAAATCGGAATTTGTTCGATTGAATGGGATTGGAATTGTTGTGAATGTTGTCGTTCAAATTCTCATTGATTGTTCTGATTTTTGGACGTTTGAAGCTTGTGAAGAGGCTGTGGGAGTGTTGTCTCAGCTTCCGATTTCGAACGAAGACAAACTGTTCGACGAAATGTCTAAGAGAGAAGAATTGATGAAATCCATCGCTATTGTTCTTCAAAGGGGAAGTGCTGAAGGCCGTTTTTACGCTGTGAAAATCCTAAGAAATATTGCTAAGAACACCAATTTCAATTGGGGCTCTGTTTTGGAAGAACAGGGGATTGATTTCTTCAAGCCATTGTTGGAGCTTGTATCAGACGAATTCTCCACAAAGGCAAGCTCGTGCACATTGGATGTAATGATGGAAATTTTAGCATTGTCAAAGAGAAGTCGAGTGAAGGCGATCGAGGCCGGTGCTGTGTGCATCCTCATCGAGCTCTTACCGGAGTCGGGTCGATCGAAATGCGAGCGAATGCTGCAGATTCTGCAGAGTTTGTGTGAATGTGCAGAGGGGAGATTGGCTTTGGTGGAACATGGGATGGGAATTGCAGCAGTGACTAAGAAGATTTTGAATGTTTCAAACGTAGCAACAAAAATGGGAGTGAAGATTTTGCTTTGGATTAGTAGTTTTCACCCCAATGAAAGGGTTGTGGAAGAGATGATGGCTTGTGGGGTAGTGAAGAAGCTGATGATGATATTGCACATGGACGGCGGCGGTGGCGGCGGCGGCGGTGGCCGGAGTTCGACGAAGGAGAAGGCGATCAAGATTTTGAAGATGCATGGGAGCTCATGGAGGCGTAGCCCTTGTTTTCCAATTAATGGCTTCATCCACCATAAGCCATCACTTAACAAGCTCATTGCCCATGTCCTCTCAATGGGCTCGCCTGGTCTTGCCTATGCTTATTCAGTTTTTTCACACACTCAAGAGTTGGATATACTTACTTGGAACACCATGTTGAGAGGCCTTGTGAATTCCAACATGCCGAGAAGGGCACTCCATAGTTACTTTGAGATGCTTCAATGGTCGAGAAATGTTGCTGATAGATTCACATTTCCTTCACTGCTGAAGGTTTGTGCCCTTTCATTGGAACTCAAAGTTGGGAAGTATATGCTTGATTCCGACCTGTACATAGAAACCACATTGTTAAATATGTATGCTGCCTGTGGGGATTTGAACTCCGCGAAGGTTTTGTTTGAGAAAATGGGTCATAGAAACGAAGTGGTTTGGACTTTGATGATTAGTGGTTGTACGAAAAACCATTGTCCTAATGAGGCATTTCTTTTGTATGAGAAAAATGGAGGAAGATGGATTTACTCCGATGAAGTGACCATGGCAACACTCGTACGGCTTGTGCTCAATTGA

Coding sequence (CDS)

ATGGATTCCGATTTTCCTCCTCTTTTCGGATGCCCGATTTCCATGGAGCTCATGGAGGATCCCGTCACCATCTCCACCGGCGTCACCTACGAGAGAAAAAGCATCGAAAAATGGCTCTTCACTTACAACAACAAAACCTGTCCGGCGACGATGCAGACCCTCGCCGCTGGCGACTTCGTCATTACTCCTAATCTCACTCTCAAACGCCTCATTCTCGCTTGGAAGATTACTGATTCTTCTGCGTCGCCGGCGACGATCGAGGAAGTCCGATCGCTGCTTGCGACTGTTGAGTCTTCTCCATTCAAGGTGAGTTCGTTGAGGAAATTGAGATCGATGATTGAAACGAGCGATGAGATGAAATCGGAATTTGTTCGATTGAATGGGATTGGAATTGTTGTGAATGTTGTCGTTCAAATTCTCATTGATTGTTCTGATTTTTGGACGTTTGAAGCTTGTGAAGAGGCTGTGGGAGTGTTGTCTCAGCTTCCGATTTCGAACGAAGACAAACTGTTCGACGAAATGTCTAAGAGAGAAGAATTGATGAAATCCATCGCTATTGTTCTTCAAAGGGGAAGTGCTGAAGGCCGTTTTTACGCTGTGAAAATCCTAAGAAATATTGCTAAGAACACCAATTTCAATTGGGGCTCTGTTTTGGAAGAACAGGGGATTGATTTCTTCAAGCCATTGTTGGAGCTTGTATCAGACGAATTCTCCACAAAGGCAAGCTCGTGCACATTGGATGTAATGATGGAAATTTTAGCATTGTCAAAGAGAAGTCGAGTGAAGGCGATCGAGGCCGGTGCTGTGTGCATCCTCATCGAGCTCTTACCGGAGTCGGGTCGATCGAAATGCGAGCGAATGCTGCAGATTCTGCAGAGTTTGTGTGAATGTGCAGAGGGGAGATTGGCTTTGGTGGAACATGGGATGGGAATTGCAGCAGTGACTAAGAAGATTTTGAATGTTTCAAACGTAGCAACAAAAATGGGAGTGAAGATTTTGCTTTGGATTAGTAGTTTTCACCCCAATGAAAGGGTTGTGGAAGAGATGATGGCTTGTGGGGTAGTGAAGAAGCTGATGATGATATTGCACATGGACGGCGGCGGTGGCGGCGGCGGCGGTGGCCGGAGTTCGACGAAGGAGAAGGCGATCAAGATTTTGAAGATGCATGGGAGCTCATGGAGGCGTAGCCCTTGTTTTCCAATTAATGGCTTCATCCACCATAAGCCATCACTTAACAAGCTCATTGCCCATGTCCTCTCAATGGGCTCGCCTGGTCTTGCCTATGCTTATTCAGTTTTTTCACACACTCAAGAGTTGGATATACTTACTTGGAACACCATGTTGAGAGGCCTTGTGAATTCCAACATGCCGAGAAGGGCACTCCATAGTTACTTTGAGATGCTTCAATGGTCGAGAAATGTTGCTGATAGATTCACATTTCCTTCACTGCTGAAGGTTTGTGCCCTTTCATTGGAACTCAAAGTTGGGAAGTATATGCTTGATTCCGACCTGTACATAGAAACCACATTGTTAAATATGTATGCTGCCTGTGGGGATTTGAACTCCGCGAAGGTTTTGTTTGAGAAAATGGGTCATAGAAACGAAGTGGTTTGGACTTTGATGATTAGTGGTTGTACGAAAAACCATTGTCCTAATGAGGCATTTCTTTTGTATGAGAAAAATGGAGGAAGATGGATTTACTCCGATGAAGTGACCATGGCAACACTCGTACGGCTTGTGCTCAATTGA
Homology
[Close]
BLAST of CmoCh06G011970 vs. Swiss-Prot
Match: PUB23_ARATH (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.9e-54
Identity = 140/415 (33.73%), Postives = 220/415 (53.01%), Query Frame = 1 

Query: 4   DFPPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITP 63
           + PP F CPIS+E+M+DPV +STG+TY+R SIEKWLF     +CP T Q +   D  +TP
Sbjct: 11  EIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDAD--LTP 70

Query: 64  NLTLKRLILAWKITDSS---------ASPATIEEVRSLLA-TVESSPFKVSSLRKLRSMI 123
           N TL+RLI +W   ++S           P    E+  L+  +  S   +V  L++LR ++
Sbjct: 71  NHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIV 130

Query: 124 ETSDEMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPISNEDKLFDE 183
             +   K           + N+V       +D       +EA+ +L  L  S E  L + 
Sbjct: 131 SENATNKRCLEAAGVPEFLANIV------SNDSENGSLTDEALNLLYHLETS-ETVLKNL 190

Query: 184 MSKREE--LMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGIDFFKPLLE 243
           ++ +++  ++KS+  ++QRG  E R YA  +L+NI +  +      L+    + F  +++
Sbjct: 191 LNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKP---EVFTEVVQ 250

Query: 244 LVSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPE----SGRSKCERM 303
           ++ D  S KA+   + +++ I     R+R KA+EAG + ++IELL +    S R   E  
Sbjct: 251 ILDDRISQKATKAAMHILVNICPWG-RNRHKAVEAGVISVIIELLMDESFTSERRGPEMA 310

Query: 304 LQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVVE 363
           + +L  LC+CAEGR   + HG  IA V KKIL VS  A+   V++LL +  F     ++ 
Sbjct: 311 MVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLH 370

Query: 364 EMMACGVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSWRRSPCFPIN 403
           EM+  GVV KL ++L +  GG         TKEKA ++LK+H   W+ SPC P N
Sbjct: 371 EMLQLGVVAKLCLVLQVSCGG--------KTKEKAKELLKLHARVWKDSPCLPKN 404

[Close]
BLAST of CmoCh06G011970 vs. Swiss-Prot
Match: PUB22_ARATH (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.3e-49
Identity = 138/437 (31.58%), Postives = 220/437 (50.34%), Query Frame = 1 

Query: 4   DFPPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITP 63
           + P  F CPIS+++M+DPV +STG+TY+R+SIEKWLF+    +CP T Q +   D  +TP
Sbjct: 6   EIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETD--LTP 65

Query: 64  NLTLKRLILAWKITDSS---------ASPATIEEVRSLLATVESSPF-KVSSLRKLRSMI 123
           N TL+RLI +W   ++S           P    E+  L+    SS   +V  L++LR ++
Sbjct: 66  NHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIV 125

Query: 124 ETSDEMKSEFVRLNGIGIVVNVVVQIL-------IDCSDFWTFEAC-------------- 183
             +   K           + N+V   +          S     + C              
Sbjct: 126 SENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSSRS 185

Query: 184 --EEAVGVLSQLPISNED-KLFDEMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKN 243
             +EA+ VL  L  S    K      K   L+K++  ++QRG  E R YA  +L+ + + 
Sbjct: 186 LMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLLEV 245

Query: 244 TNFNWGSVLEEQGIDFFKPLLELVSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAV 303
            +     +LE    + F  +++++ D+ S KA+   + +++ I     R+R KA+E G +
Sbjct: 246 ADPMQIILLER---ELFGEVIQILHDQISHKATRSAMQILV-ITCPWGRNRHKAVEGGTI 305

Query: 304 CILIELLPE----SGRSKCERMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVA 363
            ++IELL +    S R   E  + +L  LC+CAEGR   + HG  IA V+KKIL VS + 
Sbjct: 306 SMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQIT 365

Query: 364 TKMGVKILLWISSFHPNERVVEEMMACGVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKI 403
           ++  V++LL +  F     +++EM+  GVV KL ++L +  G        + TKEKA ++
Sbjct: 366 SERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCG--------NKTKEKAKEL 425

[Close]
BLAST of CmoCh06G011970 vs. Swiss-Prot
Match: PUB24_ARATH (E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 5.9e-34
Identity = 131/446 (29.37%), Postives = 211/446 (47.31%), Query Frame = 1 

Query: 4   DFPPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITP 63
           + P  F CPIS+E+M+DPVT  +G+TY+R++I KWL      +CP T Q L   D  +TP
Sbjct: 9   EIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV--PSCPVTKQPLPL-DSDLTP 68

Query: 64  NLTLKRLILAW----------KITDSSASPA---TIEEVRSLLATVESSPFKVSSLRKLR 123
           N  L+RLI  W          +I+     P     +EE+++L    + +  +  +L+KL 
Sbjct: 69  NHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREETLQKLE 128

Query: 124 SMIETSDEMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPI-SNEDK 183
            +    +  +          +++ VV     D       +  +E++ +L  + I SN+ K
Sbjct: 129 VLAMDGNNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIGIPSNDAK 188

Query: 184 LFDEMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQG----IDF 243
               + + + +M+S+  VL +     + Y + +LRN+ + T+ +    L  +     I F
Sbjct: 189 TI--LMENDRVMESLTWVLHQEDFLSKAYTIVLLRNLTEYTSSHIVERLNPEIFKGIIGF 248

Query: 244 FKPLLELVSDEFST----------------------------KASSCTLDVMMEILALSK 303
            K ++  V+    T                            +A +  L +++E  + S 
Sbjct: 249 LKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILLETSSWS- 308

Query: 304 RSRVKAIEAGAVCILIEL-LPESGRSKC-ERMLQILQSLCECAEGRLALVEHGMGIAAVT 363
           R+R   ++ GAV  LIEL +  +G  +  E ML +L  LC CA GR  ++ H  GIA VT
Sbjct: 309 RNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGGIAVVT 368

Query: 364 KKILNVSNVATKMGVKILLWISSFHPNERVVEEMMACGVVKKLMMILHMDGGGGGGGGGR 402
           K++L VS  A    + IL  +S F P   VVEEM+  G V+KL  +L MD G        
Sbjct: 369 KRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCG-------- 428

[Close]
BLAST of CmoCh06G011970 vs. Swiss-Prot
Match: PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.9e-33
Identity = 126/407 (30.96%), Postives = 196/407 (48.16%), Query Frame = 1 

Query: 6   PPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITPNL 65
           P  F CPIS+ELM+DPVT+ TG TY+R SIE W+   NN TCP T   L+  DF + PN 
Sbjct: 15  PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLS--DFTLIPNH 74

Query: 66  TLKRLILAWKITDSS---------ASPATIEEVRSLLA-------TVESSPFKVSSLRKL 125
           TL+RLI  W + + S           PA    VR+LL+       T  S   + ++LR+L
Sbjct: 75  TLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRRL 134

Query: 126 RSMIETSDEMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPISNEDK 185
           R     SD+ +      N   I++ ++       S+  + E   E++ +L  LPI+ E  
Sbjct: 135 RGFARDSDKNRVLIAAHNATEILIKILF------SETTSSELVSESLALLVMLPIT-EPN 194

Query: 186 LFDEMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFN--WGSVLEEQGIDFFK 245
            F  +S     ++ +  +L   S E R  A  ++  ++  T      GS+   + +  F+
Sbjct: 195 QFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESV--FE 254

Query: 246 PLLELVSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIE-LLPESGRSKCER 305
            +L+L+ +  S++ +       +  L   K +R  AI AGA  ILI+ L  +  R   ER
Sbjct: 255 GVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTER 314

Query: 306 MLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVV 365
            L  ++ LC   EG  A  EH + +  + K IL VS+ AT+     LL + +    ER  
Sbjct: 315 ALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCT--AEERWR 374

Query: 366 EEMMACGVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSW 394
           EE    GVV +L++++  +             K+KA K+LK+   SW
Sbjct: 375 EEAAGAGVVVQLLLMVQSE--------CTERAKKKAQKLLKLLRDSW 400

[Close]
BLAST of CmoCh06G011970 vs. Swiss-Prot
Match: PUB21_ARATH (U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.1e-29
Identity = 118/406 (29.06%), Postives = 195/406 (48.03%), Query Frame = 1 

Query: 6   PPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITPNL 65
           PP F CPIS++LM+DPV ISTG+TY+R SIE W+ +  NKTCP T   L   D +  PN 
Sbjct: 32  PPEFQCPISIDLMKDPVIISTGITYDRVSIETWINS-GNKTCPVTNTVLTTFDQI--PNH 91

Query: 66  TLKRLILAWKITDSSASPATIEEVRSLLATVESSPFKVSSLRKLRSMIETSDEMKSEFV- 125
           T++++I  W +   S     I   R  L   E   +++S  RKL S     D  K   + 
Sbjct: 92  TIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEV--YEIS--RKLSSATRRGDYEKCGVII 151

Query: 126 -RLNGIG---------IVVNVVVQILIDCSDFWTFEACEEAVGVLSQL--------PISN 185
            ++  +G         +  N V  +L DC D   F   E+   +L+++        PI  
Sbjct: 152 EKIKKLGDESEKNRKCVNENSVGWVLCDCFD--KFSGDEKLTFMLNEILSLLTWMFPIGL 211

Query: 186 E--DKLFDEMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGID 245
           E   KL    S R      +A +L+      R  A  I++ I         S   E G+ 
Sbjct: 212 EGISKLASATSFR-----CVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVA 271

Query: 246 FFKPLLELVSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPESGRSKC 305
             + L++L+ D  S+ ++  +L  + +++        + +E G V I +E++ ++  S C
Sbjct: 272 --EALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVC 331

Query: 306 ERMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATK--MGVKILLWISSFHPN 365
           E+ L +L ++CE   GR  + ++ + +  + KKI  VS +AT+  M + + LW +    N
Sbjct: 332 EKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTG---N 391

Query: 366 ERVVEEMMACGVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKILKM 389
              VE+ +  G  +K++++L +  G          TKEKA ++LKM
Sbjct: 392 TVAVEDAVRLGAFQKVLLVLQVGYG--------EETKEKATELLKM 410

[Close]
BLAST of CmoCh06G011970 vs. TrEMBL
Match: A0A0A0L6J2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127120 PE=4 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 5.3e-191
Identity = 349/403 (86.60%), Postives = 372/403 (92.31%), Query Frame = 1 

Query: 1   MDSDFPPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAG--D 60
           MDSDFPPLF CPISMELMEDPVT+STGVTY+RKSIEKWLFTYN KTCPATMQTLAAG  D
Sbjct: 1   MDSDFPPLFRCPISMELMEDPVTVSTGVTYDRKSIEKWLFTYNKKTCPATMQTLAAGAED 60

Query: 61  FVITPNLTLKRLILAWKITDSSASPAT-IEEVRSLLATVESSPFKVSSLRKLRSMIETSD 120
           FVITPNL LKRLILAWKI DS+ +PAT +EEV SLLATVESSPFKVSSLRKLRSM+E +D
Sbjct: 61  FVITPNLNLKRLILAWKINDSALTPATALEEVSSLLATVESSPFKVSSLRKLRSMVEMND 120

Query: 121 EMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPISNEDKLFDEMSKR 180
            MKSEF+RL+GIGIVVNVV+QILIDCSDF T + CEEA+GVL Q PISNEDKLFDEM KR
Sbjct: 121 GMKSEFIRLSGIGIVVNVVIQILIDCSDFSTLDTCEEALGVLCQFPISNEDKLFDEMYKR 180

Query: 181 EELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGIDFFKPLLELVSDEF 240
           EELMKSIA+V+QRGSAEGRFYAVKILRNIAKNTN+NWGS++EEQGIDFFKPLLELVSDEF
Sbjct: 181 EELMKSIAVVVQRGSAEGRFYAVKILRNIAKNTNYNWGSIMEEQGIDFFKPLLELVSDEF 240

Query: 241 STKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPESGRSKCERMLQILQSLCEC 300
            TKASSC LDVM+EIL+ SKRSRVKAIEAGAV ILIELLPESGRSKCERMLQILQSLCEC
Sbjct: 241 PTKASSCALDVMIEILSSSKRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQSLCEC 300

Query: 301 AEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVVEEMMACGVVKK 360
           AEGRLALVEHGMGIAAVTKKILNVS VATK+GVKILLWISSFHP ERVV+EMMACG VKK
Sbjct: 301 AEGRLALVEHGMGIAAVTKKILNVSYVATKIGVKILLWISSFHPRERVVDEMMACGAVKK 360

Query: 361 LMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSWRRSPCFP 401
           L+MILHMD   G G GGRSSTKEK IKILKMHG+ WRRSPCFP
Sbjct: 361 LLMILHMD-STGVGDGGRSSTKEKVIKILKMHGNKWRRSPCFP 402

[Close]
BLAST of CmoCh06G011970 vs. TrEMBL
Match: A0A059CEH8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01133 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 3.9e-125
Identity = 241/405 (59.51%), Postives = 308/405 (76.05%), Query Frame = 1 

Query: 4   DFPPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITP 63
           D+P  F CPISME+MEDPVTI+TG+TYERK+IEKW F Y  KTCPATMQ++ +  F ITP
Sbjct: 2   DYPLDFRCPISMEVMEDPVTIATGMTYERKNIEKWFFAYKKKTCPATMQSVES--FGITP 61

Query: 64  NLTLKRLILAWKITDSSASPATI--------EEVRSLLATVESSPFKVSSLRKLRSMIET 123
           N TLKRLI+ W+      +P++         +E+ SLL  +ESSPFKV+SL+KLRSMIET
Sbjct: 62  NHTLKRLIITWQSKGGPGTPSSESRKSTERHDEIVSLLEALESSPFKVTSLKKLRSMIET 121

Query: 124 SDEMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPISNEDKLFDEMS 183
            DE K++FV+  GIGI+V +  Q+L D SDF  F ACEEA+GVL QL +S E K  + +S
Sbjct: 122 DDEAKADFVQSGGIGIIVRIASQVLEDGSDFSIFRACEEALGVLHQLSLSTEAKTLETLS 181

Query: 184 KREELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGIDFFKPLLELVSD 243
           K  E +K +  +LQRGSAE R +A+ ILRN+A++   +W  +L++ GID FK LLELVSD
Sbjct: 182 K-PEAVKCVTAMLQRGSAEARSHAIIILRNMAQSET-HWTFILQDHGIDLFKSLLELVSD 241

Query: 244 EFSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPESGRSKCERMLQILQSLC 303
           E  T+ASS  L+V++E+L+ SK+SRV+AIEAGAVC+L+ELLPES RSK E++L +L+ LC
Sbjct: 242 EICTRASSYALEVLVEMLSASKKSRVRAIEAGAVCVLVELLPESNRSKSEKILMLLKLLC 301

Query: 304 ECAEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVVEEMMACGVV 363
           ECAEGRLA+V+HGMGIAAVTKK+LNVSN ATK+ VKIL  I SFHP+ERV+EEM+  G V
Sbjct: 302 ECAEGRLAMVDHGMGIAAVTKKMLNVSNAATKLSVKILWLIGSFHPSERVLEEMLIYGSV 361

Query: 364 KKLMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSWRRSPCFP 401
           KKL+ +LH+D        GRSSTKEK IK+ KMH +SW+R PCFP
Sbjct: 362 KKLLALLHID--------GRSSTKEKVIKMFKMHCNSWQRCPCFP 394

[Close]
BLAST of CmoCh06G011970 vs. TrEMBL
Match: W9RFU0_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_023862 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 3.9e-125
Identity = 242/412 (58.74%), Postives = 319/412 (77.43%), Query Frame = 1 

Query: 4   DFPP-LFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVIT 63
           DFPP  F CPIS ELM+DPVTI TGVTY+RK+IEKW F+YN KTCPATMQT++  DF  T
Sbjct: 2   DFPPDHFLCPISHELMKDPVTIITGVTYDRKNIEKWFFSYNKKTCPATMQTIS--DFQPT 61

Query: 64  PNLTLKRLILAW-KITDSSASPATIE----EVRSLLATVESSPFKVSSLRKLRSMIETSD 123
           PN TLKRLIL+W K   SS S +T      E+  LLAT++SSPFKVSSL+KLRS+IE  D
Sbjct: 62  PNHTLKRLILSWQKSKSSSVSSSTSSTKHGEILDLLATIDSSPFKVSSLKKLRSIIEIGD 121

Query: 124 EMKSEFVRLNGIGIVVNVVVQILI-DCSDFWTFEACEEAVGVLSQLPISNEDKLFDEMSK 183
           E K++ +  +GI +++ ++VQIL+ D SDF TF ACEE++ VL QLP+ +E K+FD +SK
Sbjct: 122 ETKTDLIHSDGIEVLIRILVQILVSDVSDFITFRACEESLAVLHQLPLCDEGKMFDLLSK 181

Query: 184 REELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGIDFFKPLLELVSDE 243
           RE + KS+AI+LQR SAE R + + ILRN+AK T  +W  V+++QG+DFFK LLELVSDE
Sbjct: 182 RESI-KSMAIMLQRASAETRLHTLSILRNMAK-TELDWSFVIQDQGVDFFKSLLELVSDE 241

Query: 244 FSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPESGR-SKCERMLQILQSLC 303
              KASS  L+V++EIL+ SK+SR++AIEAGAVC+L+ELLP++ R  KCE++L +++ LC
Sbjct: 242 VCAKASSSALEVLIEILSRSKKSRLRAIEAGAVCVLVELLPDANRPQKCEKILLLIKLLC 301

Query: 304 ECAEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVVEEMMACGVV 363
           ECAEGRLALVEHG+G+AAV+KK+L VS  ATK  VK+L  + +FHP E+V+EEM+ CG V
Sbjct: 302 ECAEGRLALVEHGIGMAAVSKKMLWVSGAATKAAVKVLWLVCNFHPTEKVLEEMLVCGTV 361

Query: 364 KKLMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSWRRSPCFPINGFIHH 408
           KKL+ +LHMD         RSSTK+K +KI K+HG+SW++ PCFP++ F H+
Sbjct: 362 KKLLALLHMD--------ERSSTKDKVVKIFKLHGNSWKKYPCFPVD-FKHY 400

[Close]
BLAST of CmoCh06G011970 vs. TrEMBL
Match: A0A118JSS0_CYNCS (Armadillo-like helical OS=Cynara cardunculus var. scolymus GN=Ccrd_008760 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 4.6e-118
Identity = 237/415 (57.11%), Postives = 300/415 (72.29%), Query Frame = 1 

Query: 4   DFPPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITP 63
           +FP  F CPISMELM++PV ISTGVTYERK+IEKW ++Y  KTCPATMQ +   +F ITP
Sbjct: 10  EFPQDFRCPISMELMKEPVIISTGVTYERKNIEKWFYSYKKKTCPATMQIIE--NFGITP 69

Query: 64  NLTLKRLILAWK-------ITDSSASPATI---------EEVRSLLATVESSPFKVSSLR 123
           N TLKRLIL W+        + SS+SP+           +E+ SLL T+ SSPFKV+SLR
Sbjct: 70  NHTLKRLILVWQNSHSPSPSSSSSSSPSPSSSPLSSFKRDEMVSLLKTLGSSPFKVNSLR 129

Query: 124 KLRSMIETSDEMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPISNE 183
           KL+ +IE  DEMK +F+ L G+ ++  ++VQILID SDF  F ACEEA+GVL  LPIS E
Sbjct: 130 KLKEIIELGDEMKLDFMILGGLEVLFQLIVQILIDGSDFMAFRACEEALGVLQHLPISEE 189

Query: 184 D--KLFDEMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGIDF 243
           D  K+ +  SK E  MKS+AI+LQRGS E R   + IL+N+A N+NFNW  V+ +QGI  
Sbjct: 190 DDGKVIELFSKPES-MKSMAIILQRGSKEARVSTISILKNLA-NSNFNWNIVINDQGIGM 249

Query: 244 FKPLLELVSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPESGRSKCE 303
           FK +LEL SDE STKASS TL V+++IL  SK+SR KAIEAGA+C LIELLP+S RSKCE
Sbjct: 250 FKSMLELASDEISTKASSSTLQVLIKILDSSKKSRSKAIEAGAMCTLIELLPDSTRSKCE 309

Query: 304 RMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERV 363
           ++LQI++ LCECAEGR+A +EH +GI AV+KK+ NVS +A+K+ VKI   I SFHP E+V
Sbjct: 310 KILQIIKLLCECAEGRVAFIEHRLGIGAVSKKLFNVSEMASKICVKIFSLICSFHPTEKV 369

Query: 364 VEEMMACGVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSWRRSPCFP 401
           +EEMM  G VKKL+++LHM         G SSTK + + + K HGSSW R PCFP
Sbjct: 370 LEEMMVYGAVKKLVVLLHM--------SGPSSTKNRTLDMFKKHGSSWSRYPCFP 412

[Close]
BLAST of CmoCh06G011970 vs. TrEMBL
Match: A0A068UM68_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028656001 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 3.0e-117
Identity = 225/408 (55.15%), Postives = 301/408 (73.77%), Query Frame = 1 

Query: 4   DFPPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITP 63
           DFP  F CPISMELM+DPVTI TGVTYERK+IEKWL +Y   TCPATMQ + +  F +TP
Sbjct: 2   DFPQHFRCPISMELMKDPVTICTGVTYERKNIEKWLNSYKKNTCPATMQCIDS--FEMTP 61

Query: 64  NLTLKRLILAWK--------ITDSSASPATIEEVRSLLATVESSPFKVSSLRKLRSMIET 123
           N TLKRLI AW+        I  S A  A  EE+ SLL T+ES+PFKVS L+KL+S++E 
Sbjct: 62  NHTLKRLIQAWQQNGKSKSCIPSSPAQAAKHEELISLLKTIESTPFKVSPLKKLKSVVEI 121

Query: 124 SDEMKSEFVRLNGIGIVVNVVVQILIDC-SDFWTFEACEEAVGVLSQLPISNEDKLFD-- 183
            DE+K +F +  G+ ++V +VVQIL++C SDF  F ACEEA+GVL QLP+S+E++     
Sbjct: 122 GDEIKLDFKKSGGVEVLVKIVVQILVECCSDFVAFRACEEAIGVLDQLPLSDEEEDCQTL 181

Query: 184 EMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGIDFFKPLLEL 243
           ++  + E +KS  I+LQRGSAE RF  V I + +A+  +F+W   ++++GIDFFK LLE+
Sbjct: 182 QLLMKPECIKSFTIMLQRGSAEARFCIVSIFQKMAR-ADFHWNHAIKDEGIDFFKSLLEI 241

Query: 244 VSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPESGRSKCERMLQILQ 303
           VSDE  T+ASSC L V+++IL  SK+SR++AIEAGA+C LI+LLP+S +SKCE+++ +++
Sbjct: 242 VSDEMCTRASSCALQVLIDILDASKKSRLQAIEAGALCTLIDLLPDSNKSKCEKIMLLIK 301

Query: 304 SLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVVEEMMAC 363
            LCECAEGRLA +EHG+GIAA++KK+LNVS  ATK+GVKIL  I   HP E V+EEM+  
Sbjct: 302 LLCECAEGRLAFIEHGLGIAAISKKMLNVSTAATKIGVKILWLICISHPTENVLEEMLMF 361

Query: 364 GVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSWRRSPCFP 401
           G VKKL+ +LH+        GG S+TK + IKI K HG++W+R PCFP
Sbjct: 362 GSVKKLVALLHI--------GGSSTTKARVIKIFKYHGNTWKRYPCFP 398

[Close]
BLAST of CmoCh06G011970 vs. TAIR10
Match: AT2G35930.1 (AT2G35930.1 plant U-box 23)

HSP 1 Score: 214.2 bits (544), Expect = 2.2e-55
Identity = 140/415 (33.73%), Postives = 220/415 (53.01%), Query Frame = 1 

Query: 4   DFPPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITP 63
           + PP F CPIS+E+M+DPV +STG+TY+R SIEKWLF     +CP T Q +   D  +TP
Sbjct: 11  EIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDAD--LTP 70

Query: 64  NLTLKRLILAWKITDSS---------ASPATIEEVRSLLA-TVESSPFKVSSLRKLRSMI 123
           N TL+RLI +W   ++S           P    E+  L+  +  S   +V  L++LR ++
Sbjct: 71  NHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIV 130

Query: 124 ETSDEMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPISNEDKLFDE 183
             +   K           + N+V       +D       +EA+ +L  L  S E  L + 
Sbjct: 131 SENATNKRCLEAAGVPEFLANIV------SNDSENGSLTDEALNLLYHLETS-ETVLKNL 190

Query: 184 MSKREE--LMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGIDFFKPLLE 243
           ++ +++  ++KS+  ++QRG  E R YA  +L+NI +  +      L+    + F  +++
Sbjct: 191 LNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKP---EVFTEVVQ 250

Query: 244 LVSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPE----SGRSKCERM 303
           ++ D  S KA+   + +++ I     R+R KA+EAG + ++IELL +    S R   E  
Sbjct: 251 ILDDRISQKATKAAMHILVNICPWG-RNRHKAVEAGVISVIIELLMDESFTSERRGPEMA 310

Query: 304 LQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVVE 363
           + +L  LC+CAEGR   + HG  IA V KKIL VS  A+   V++LL +  F     ++ 
Sbjct: 311 MVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLH 370

Query: 364 EMMACGVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSWRRSPCFPIN 403
           EM+  GVV KL ++L +  GG         TKEKA ++LK+H   W+ SPC P N
Sbjct: 371 EMLQLGVVAKLCLVLQVSCGG--------KTKEKAKELLKLHARVWKDSPCLPKN 404

[Close]
BLAST of CmoCh06G011970 vs. TAIR10
Match: AT3G52450.1 (AT3G52450.1 plant U-box 22)

HSP 1 Score: 199.1 bits (505), Expect = 7.3e-51
Identity = 138/437 (31.58%), Postives = 220/437 (50.34%), Query Frame = 1 

Query: 4   DFPPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITP 63
           + P  F CPIS+++M+DPV +STG+TY+R+SIEKWLF+    +CP T Q +   D  +TP
Sbjct: 6   EIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETD--LTP 65

Query: 64  NLTLKRLILAWKITDSS---------ASPATIEEVRSLLATVESSPF-KVSSLRKLRSMI 123
           N TL+RLI +W   ++S           P    E+  L+    SS   +V  L++LR ++
Sbjct: 66  NHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIV 125

Query: 124 ETSDEMKSEFVRLNGIGIVVNVVVQIL-------IDCSDFWTFEAC-------------- 183
             +   K           + N+V   +          S     + C              
Sbjct: 126 SENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSSRS 185

Query: 184 --EEAVGVLSQLPISNED-KLFDEMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKN 243
             +EA+ VL  L  S    K      K   L+K++  ++QRG  E R YA  +L+ + + 
Sbjct: 186 LMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLLEV 245

Query: 244 TNFNWGSVLEEQGIDFFKPLLELVSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAV 303
            +     +LE    + F  +++++ D+ S KA+   + +++ I     R+R KA+E G +
Sbjct: 246 ADPMQIILLER---ELFGEVIQILHDQISHKATRSAMQILV-ITCPWGRNRHKAVEGGTI 305

Query: 304 CILIELLPE----SGRSKCERMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVA 363
            ++IELL +    S R   E  + +L  LC+CAEGR   + HG  IA V+KKIL VS + 
Sbjct: 306 SMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQIT 365

Query: 364 TKMGVKILLWISSFHPNERVVEEMMACGVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKI 403
           ++  V++LL +  F     +++EM+  GVV KL ++L +  G        + TKEKA ++
Sbjct: 366 SERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCG--------NKTKEKAKEL 425

[Close]
BLAST of CmoCh06G011970 vs. TAIR10
Match: AT3G11840.1 (AT3G11840.1 plant U-box 24)

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-35
Identity = 131/446 (29.37%), Postives = 211/446 (47.31%), Query Frame = 1 

Query: 4   DFPPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITP 63
           + P  F CPIS+E+M+DPVT  +G+TY+R++I KWL      +CP T Q L   D  +TP
Sbjct: 23  EIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV--PSCPVTKQPLPL-DSDLTP 82

Query: 64  NLTLKRLILAW----------KITDSSASPA---TIEEVRSLLATVESSPFKVSSLRKLR 123
           N  L+RLI  W          +I+     P     +EE+++L    + +  +  +L+KL 
Sbjct: 83  NHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREETLQKLE 142

Query: 124 SMIETSDEMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPI-SNEDK 183
            +    +  +          +++ VV     D       +  +E++ +L  + I SN+ K
Sbjct: 143 VLAMDGNNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIGIPSNDAK 202

Query: 184 LFDEMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQG----IDF 243
               + + + +M+S+  VL +     + Y + +LRN+ + T+ +    L  +     I F
Sbjct: 203 TI--LMENDRVMESLTWVLHQEDFLSKAYTIVLLRNLTEYTSSHIVERLNPEIFKGIIGF 262

Query: 244 FKPLLELVSDEFST----------------------------KASSCTLDVMMEILALSK 303
            K ++  V+    T                            +A +  L +++E  + S 
Sbjct: 263 LKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILLETSSWS- 322

Query: 304 RSRVKAIEAGAVCILIEL-LPESGRSKC-ERMLQILQSLCECAEGRLALVEHGMGIAAVT 363
           R+R   ++ GAV  LIEL +  +G  +  E ML +L  LC CA GR  ++ H  GIA VT
Sbjct: 323 RNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGGIAVVT 382

Query: 364 KKILNVSNVATKMGVKILLWISSFHPNERVVEEMMACGVVKKLMMILHMDGGGGGGGGGR 402
           K++L VS  A    + IL  +S F P   VVEEM+  G V+KL  +L MD G        
Sbjct: 383 KRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCG-------- 442

[Close]
BLAST of CmoCh06G011970 vs. TAIR10
Match: AT3G19380.1 (AT3G19380.1 plant U-box 25)

HSP 1 Score: 144.8 bits (364), Expect = 1.6e-34
Identity = 126/407 (30.96%), Postives = 196/407 (48.16%), Query Frame = 1 

Query: 6   PPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITPNL 65
           P  F CPIS+ELM+DPVT+ TG TY+R SIE W+   NN TCP T   L+  DF + PN 
Sbjct: 15  PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLS--DFTLIPNH 74

Query: 66  TLKRLILAWKITDSS---------ASPATIEEVRSLLA-------TVESSPFKVSSLRKL 125
           TL+RLI  W + + S           PA    VR+LL+       T  S   + ++LR+L
Sbjct: 75  TLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRRL 134

Query: 126 RSMIETSDEMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPISNEDK 185
           R     SD+ +      N   I++ ++       S+  + E   E++ +L  LPI+ E  
Sbjct: 135 RGFARDSDKNRVLIAAHNATEILIKILF------SETTSSELVSESLALLVMLPIT-EPN 194

Query: 186 LFDEMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFN--WGSVLEEQGIDFFK 245
            F  +S     ++ +  +L   S E R  A  ++  ++  T      GS+   + +  F+
Sbjct: 195 QFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESV--FE 254

Query: 246 PLLELVSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIE-LLPESGRSKCER 305
            +L+L+ +  S++ +       +  L   K +R  AI AGA  ILI+ L  +  R   ER
Sbjct: 255 GVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTER 314

Query: 306 MLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVV 365
            L  ++ LC   EG  A  EH + +  + K IL VS+ AT+     LL + +    ER  
Sbjct: 315 ALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCT--AEERWR 374

Query: 366 EEMMACGVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSW 394
           EE    GVV +L++++  +             K+KA K+LK+   SW
Sbjct: 375 EEAAGAGVVVQLLLMVQSE--------CTERAKKKAQKLLKLLRDSW 400

[Close]
BLAST of CmoCh06G011970 vs. TAIR10
Match: AT5G37490.1 (AT5G37490.1 ARM repeat superfamily protein)

HSP 1 Score: 132.9 bits (333), Expect = 6.5e-31
Identity = 118/406 (29.06%), Postives = 195/406 (48.03%), Query Frame = 1 

Query: 6   PPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVITPNL 65
           PP F CPIS++LM+DPV ISTG+TY+R SIE W+ +  NKTCP T   L   D +  PN 
Sbjct: 32  PPEFQCPISIDLMKDPVIISTGITYDRVSIETWINS-GNKTCPVTNTVLTTFDQI--PNH 91

Query: 66  TLKRLILAWKITDSSASPATIEEVRSLLATVESSPFKVSSLRKLRSMIETSDEMKSEFV- 125
           T++++I  W +   S     I   R  L   E   +++S  RKL S     D  K   + 
Sbjct: 92  TIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEV--YEIS--RKLSSATRRGDYEKCGVII 151

Query: 126 -RLNGIG---------IVVNVVVQILIDCSDFWTFEACEEAVGVLSQL--------PISN 185
            ++  +G         +  N V  +L DC D   F   E+   +L+++        PI  
Sbjct: 152 EKIKKLGDESEKNRKCVNENSVGWVLCDCFD--KFSGDEKLTFMLNEILSLLTWMFPIGL 211

Query: 186 E--DKLFDEMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGID 245
           E   KL    S R      +A +L+      R  A  I++ I         S   E G+ 
Sbjct: 212 EGISKLASATSFR-----CVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVA 271

Query: 246 FFKPLLELVSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPESGRSKC 305
             + L++L+ D  S+ ++  +L  + +++        + +E G V I +E++ ++  S C
Sbjct: 272 --EALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVC 331

Query: 306 ERMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATK--MGVKILLWISSFHPN 365
           E+ L +L ++CE   GR  + ++ + +  + KKI  VS +AT+  M + + LW +    N
Sbjct: 332 EKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTG---N 391

Query: 366 ERVVEEMMACGVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKILKM 389
              VE+ +  G  +K++++L +  G          TKEKA ++LKM
Sbjct: 392 TVAVEDAVRLGAFQKVLLVLQVGYG--------EETKEKATELLKM 410

[Close]
BLAST of CmoCh06G011970 vs. NCBI nr
Match: gi|449433143|ref|XP_004134357.1| (PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus])

HSP 1 Score: 675.6 bits (1742), Expect = 7.6e-191
Identity = 349/403 (86.60%), Postives = 372/403 (92.31%), Query Frame = 1 

Query: 1   MDSDFPPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAG--D 60
           MDSDFPPLF CPISMELMEDPVT+STGVTY+RKSIEKWLFTYN KTCPATMQTLAAG  D
Sbjct: 1   MDSDFPPLFRCPISMELMEDPVTVSTGVTYDRKSIEKWLFTYNKKTCPATMQTLAAGAED 60

Query: 61  FVITPNLTLKRLILAWKITDSSASPAT-IEEVRSLLATVESSPFKVSSLRKLRSMIETSD 120
           FVITPNL LKRLILAWKI DS+ +PAT +EEV SLLATVESSPFKVSSLRKLRSM+E +D
Sbjct: 61  FVITPNLNLKRLILAWKINDSALTPATALEEVSSLLATVESSPFKVSSLRKLRSMVEMND 120

Query: 121 EMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPISNEDKLFDEMSKR 180
            MKSEF+RL+GIGIVVNVV+QILIDCSDF T + CEEA+GVL Q PISNEDKLFDEM KR
Sbjct: 121 GMKSEFIRLSGIGIVVNVVIQILIDCSDFSTLDTCEEALGVLCQFPISNEDKLFDEMYKR 180

Query: 181 EELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGIDFFKPLLELVSDEF 240
           EELMKSIA+V+QRGSAEGRFYAVKILRNIAKNTN+NWGS++EEQGIDFFKPLLELVSDEF
Sbjct: 181 EELMKSIAVVVQRGSAEGRFYAVKILRNIAKNTNYNWGSIMEEQGIDFFKPLLELVSDEF 240

Query: 241 STKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPESGRSKCERMLQILQSLCEC 300
            TKASSC LDVM+EIL+ SKRSRVKAIEAGAV ILIELLPESGRSKCERMLQILQSLCEC
Sbjct: 241 PTKASSCALDVMIEILSSSKRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQSLCEC 300

Query: 301 AEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVVEEMMACGVVKK 360
           AEGRLALVEHGMGIAAVTKKILNVS VATK+GVKILLWISSFHP ERVV+EMMACG VKK
Sbjct: 301 AEGRLALVEHGMGIAAVTKKILNVSYVATKIGVKILLWISSFHPRERVVDEMMACGAVKK 360

Query: 361 LMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSWRRSPCFP 401
           L+MILHMD   G G GGRSSTKEK IKILKMHG+ WRRSPCFP
Sbjct: 361 LLMILHMD-STGVGDGGRSSTKEKVIKILKMHGNKWRRSPCFP 402

[Close]
BLAST of CmoCh06G011970 vs. NCBI nr
Match: gi|659075605|ref|XP_008438233.1| (PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis melo])

HSP 1 Score: 673.3 bits (1736), Expect = 3.8e-190
Identity = 351/403 (87.10%), Postives = 371/403 (92.06%), Query Frame = 1 

Query: 1   MDSDFPPLFGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAG--D 60
           MDSDFPPLF CPISMELMEDPVT+STGVTY+RKSIEKWLFTYN KTCPATMQTLAAG  D
Sbjct: 1   MDSDFPPLFRCPISMELMEDPVTVSTGVTYDRKSIEKWLFTYNKKTCPATMQTLAAGADD 60

Query: 61  FVITPNLTLKRLILAWKITDSSASPAT-IEEVRSLLATVESSPFKVSSLRKLRSMIETSD 120
           FVITPNLTLKRLILAWKI DS+++PAT +EEV SLLATVESSPFKVSSLRKLRS+IE +D
Sbjct: 61  FVITPNLTLKRLILAWKINDSASTPATALEEVSSLLATVESSPFKVSSLRKLRSIIEMND 120

Query: 121 EMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPISNEDKLFDEMSKR 180
            MKSEFVRL+GIGIVVNVV+QILIDCSDF T E CEEA+GVL Q PISNEDKLFDEM KR
Sbjct: 121 GMKSEFVRLSGIGIVVNVVIQILIDCSDFSTLETCEEALGVLCQFPISNEDKLFDEMYKR 180

Query: 181 EELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGIDFFKPLLELVSDEF 240
           EELMKSI +VLQRGSAEGRFYAVKILRNIAKNTN+NWGSV+EEQ IDFFKPLLELVSDEF
Sbjct: 181 EELMKSITVVLQRGSAEGRFYAVKILRNIAKNTNYNWGSVMEEQAIDFFKPLLELVSDEF 240

Query: 241 STKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPESGRSKCERMLQILQSLCEC 300
            TKASSC LDVM+ IL+ SKRSRVKAIEAGAV ILIELLPESGRSKCERMLQILQSLCEC
Sbjct: 241 PTKASSCALDVMIGILSSSKRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQSLCEC 300

Query: 301 AEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVVEEMMACGVVKK 360
           AEGRLALVEHGMGIAAVTKKILNVS VATK+GVKILLWISSFHP ERVV+EMMACG VKK
Sbjct: 301 AEGRLALVEHGMGIAAVTKKILNVSYVATKIGVKILLWISSFHPRERVVDEMMACGAVKK 360

Query: 361 LMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSWRRSPCFP 401
           L+MILHMD   G G GGRSSTKEK IKILKMHG+ WRRSPCFP
Sbjct: 361 LLMILHMD-SVGVGDGGRSSTKEKVIKILKMHGNKWRRSPCFP 402

[Close]
BLAST of CmoCh06G011970 vs. NCBI nr
Match: gi|645252683|ref|XP_008232231.1| (PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Prunus mume])

HSP 1 Score: 463.8 bits (1192), Expect = 4.5e-127
Identity = 240/412 (58.25%), Postives = 315/412 (76.46%), Query Frame = 1 

Query: 4   DFPPL-FGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFVIT 63
           DF P  F CPISMELM++PVTISTGVTYERK+IEKW FTY  KTCPATMQ++   +F I 
Sbjct: 2   DFLPCHFRCPISMELMKEPVTISTGVTYERKNIEKWFFTYKKKTCPATMQSIE--NFGII 61

Query: 64  PNLTLKRLILAWKITDSSASP--------------ATIEEVRSLLATVESSPFKVSSLRK 123
           PN TLKRLI++W+  + S S               A  +E+++LL+TV SSPFKV+S++K
Sbjct: 62  PNHTLKRLIVSWQSNEDSKSSCSSPSSSQSQPCPSAKHDEIQALLSTVVSSPFKVNSIKK 121

Query: 124 LRSMIETSDEMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPISNED 183
           LRS+IE  DEMK +F++ NG+ ++V ++ Q ++D SDF TF ACEEA+ VL QLPIS E 
Sbjct: 122 LRSIIEIDDEMKDDFIQSNGVEVLVQILDQTIMDSSDFVTFRACEEALCVLHQLPISEEG 181

Query: 184 KLFDEMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGIDFFKP 243
           K F+ +SK+E   +S+AI+LQRGSAE R + + I R + K T ++W  ++++QGIDFFK 
Sbjct: 182 KTFELLSKQEST-RSMAIMLQRGSAEARLHTITIFRKMVK-TEYDWSFIVQDQGIDFFKS 241

Query: 244 LLELVSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPESGRSKCERML 303
           LLELVSDE  +KASSC L+V++EIL  SK++R++AIEAGAVC+LIELL +S RSKCE+ML
Sbjct: 242 LLELVSDEICSKASSCALEVLIEILRASKKNRLRAIEAGAVCVLIELLQDSNRSKCEKML 301

Query: 304 QILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVVEE 363
            +++ LCECAEGR ALVEHGMGIAA+T+K+L+VSN ATK+GVKI+  + +FHP ERV+EE
Sbjct: 302 HLIKLLCECAEGRQALVEHGMGIAAITQKMLHVSNAATKIGVKIIWLVCNFHPTERVLEE 361

Query: 364 MMACGVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSWRRSPCFP 401
           M+  G VKKL+ +LHMD        GRSSTK+K +KI KMHG+SW+R PCFP
Sbjct: 362 MLMYGSVKKLLALLHMD--------GRSSTKDKVVKIFKMHGNSWKRYPCFP 401

[Close]
BLAST of CmoCh06G011970 vs. NCBI nr
Match: gi|657950220|ref|XP_008346772.1| (PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Malus domestica])

HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126
Identity = 237/411 (57.66%), Postives = 314/411 (76.40%), Query Frame = 1 

Query: 2   DSDFPPL-FGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDFV 61
           D DFPP  F CPISMELM+DPVTISTGVTYER +IEKW F+Y  KTCPATMQ+L   D +
Sbjct: 14  DHDFPPYHFRCPISMELMKDPVTISTGVTYERNNIEKWFFSYKKKTCPATMQSLENFDMI 73

Query: 62  ITPNLTLKRLILAWK--------ITDSSASP---ATIEEVRSLLATVESSPFKVSSLRKL 121
             PN TLKRLI+AW+        I  +S++P   A  +E+++LL T+ SSPFKV+S++KL
Sbjct: 74  --PNHTLKRLIVAWQTEEDAKNVICSTSSTPRPSAKHDEIQALLNTIMSSPFKVNSIKKL 133

Query: 122 RSMIETSDEMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPISNEDK 181
           RS+I+  DEMK++F+R NG+ ++V ++ QIL++ SDF TF ACEEA+ +L QLPIS E K
Sbjct: 134 RSIIDLDDEMKNDFIRSNGVEVLVQILDQILLESSDFTTFRACEEALCILHQLPISGEGK 193

Query: 182 LFDEMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGIDFFKPL 241
            F  +SK+E   +S+ ++LQRGS E R + + I + +AK T ++W  V+++QGIDFFK L
Sbjct: 194 TFKLLSKQEST-RSMTVMLQRGSTEARLHTITIFKKMAK-TEYDWSFVIQDQGIDFFKSL 253

Query: 242 LELVSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPESGRSKCERMLQ 301
           LEL+SDE  +KASSC L V++EIL  SK+++++AIEAGAVC+LIELLP+S RSKCE+MLQ
Sbjct: 254 LELLSDEICSKASSCALKVLIEILTASKKNKLRAIEAGAVCVLIELLPDSNRSKCEKMLQ 313

Query: 302 ILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVVEEM 361
           +++ LCEC+EGR ALVEH MGI AV+K +L+VSN ATK+GVKI+  I +FHP ERV+EEM
Sbjct: 314 VIKLLCECSEGRQALVEHSMGIVAVSKNMLHVSNAATKIGVKIIWLICNFHPTERVLEEM 373

Query: 362 MACGVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSWRRSPCFP 401
           + CG VKKL+ +L MD         RSSTK+K +KI KMHG+SW+R PCFP
Sbjct: 374 LICGSVKKLLALLQMD--------SRSSTKDKVVKIFKMHGNSWKRYPCFP 412

[Close]
BLAST of CmoCh06G011970 vs. NCBI nr
Match: gi|470146246|ref|XP_004308738.1| (PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 458.0 bits (1177), Expect = 2.5e-125
Identity = 234/408 (57.35%), Postives = 314/408 (76.96%), Query Frame = 1 

Query: 1   MDSDFPPL-FGCPISMELMEDPVTISTGVTYERKSIEKWLFTYNNKTCPATMQTLAAGDF 60
           M  DFPP  F CPISMELM+DPVTISTGVTYER +IEKW FTY  KTCPATMQ +   D 
Sbjct: 1   MAMDFPPYHFRCPISMELMKDPVTISTGVTYERVNIEKWFFTYKKKTCPATMQRIENFDT 60

Query: 61  VITPNLTLKRLILAW------KITDSSASPATI-EEVRSLLATVESSPFKVSSLRKLRSM 120
           +  PN TLKRLILAW      K ++ S SP+   EE+ +LL+T+ SSPFKVSSL+KLRS+
Sbjct: 61  I--PNHTLKRLILAWQNQGDSKSSELSNSPSDKHEEIEALLSTIMSSPFKVSSLKKLRSI 120

Query: 121 IETSDEMKSEFVRLNGIGIVVNVVVQILIDCSDFWTFEACEEAVGVLSQLPISNEDKLFD 180
           I+  +E K++F+   G+ ++V ++ Q L + SDF TF ACEEA+ +L QLPIS E+    
Sbjct: 121 IDMGEETKNDFISCKGVEVLVQILDQTLTENSDFVTFRACEEALCILHQLPISEEEGDSF 180

Query: 181 EMSKREELMKSIAIVLQRGSAEGRFYAVKILRNIAKNTNFNWGSVLEEQGIDFFKPLLEL 240
           ++  +++  +S+AI+LQRGSAE R + + I + +AK TN++W  V+++QG+DFFK LLEL
Sbjct: 181 KLLSKQDSTRSMAIMLQRGSAEARLHTITIFKKMAK-TNYDWNFVIQDQGLDFFKSLLEL 240

Query: 241 VSDEFSTKASSCTLDVMMEILALSKRSRVKAIEAGAVCILIELLPESGRSKCERMLQILQ 300
           VSDE  +KASSC L+V++EIL  SK++++KAIEAGAVC+LIELLPES RS+CE+MLQ+++
Sbjct: 241 VSDEICSKASSCALEVLIEILRASKKNKLKAIEAGAVCVLIELLPESSRSRCEKMLQVIK 300

Query: 301 SLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKMGVKILLWISSFHPNERVVEEMMAC 360
            LCECAEGRLALVEHGMGI  ++KK+++VSNVATK+GVKI+  + +FHP E+V+EEM+  
Sbjct: 301 LLCECAEGRLALVEHGMGIVVISKKMMHVSNVATKIGVKIMWLVCNFHPTEKVLEEMLIY 360

Query: 361 GVVKKLMMILHMDGGGGGGGGGRSSTKEKAIKILKMHGSSWRRSPCFP 401
           G VKKL+ +LHMD        GRSSTK+K +KI ++HG+SW+R PC+P
Sbjct: 361 GSVKKLLALLHMD--------GRSSTKDKVVKIFRLHGNSWKRYPCYP 397

The following BLAST results are available for this feature:
BLAST of CmoCh06G011970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PUB23_ARATH3.9e-5433.73E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=1[more]
PUB22_ARATH1.3e-4931.58E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22 PE=1 SV=1[more]
PUB24_ARATH5.9e-3429.37E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24 PE=1 SV=1[more]
PUB25_ARATH2.9e-3330.96U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1[more]
PUB21_ARATH1.1e-2929.06U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21 PE=2 SV=1[more]
BLAST of CmoCh06G011970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6J2_CUCSA5.3e-19186.60Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127120 PE=4 SV=1[more]
A0A059CEH8_EUCGR3.9e-12559.51Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01133 PE=4 SV=1[more]
W9RFU0_9ROSA3.9e-12558.74E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_023862 PE=4 SV=1[more]
A0A118JSS0_CYNCS4.6e-11857.11Armadillo-like helical OS=Cynara cardunculus var. scolymus GN=Ccrd_008760 PE=4 S... [more]
A0A068UM68_COFCA3.0e-11755.15Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028656001 PE=4 SV=1[more]
BLAST of CmoCh06G011970 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G35930.12.2e-5533.73 plant U-box 23[more]
AT3G52450.17.3e-5131.58 plant U-box 22[more]
AT3G11840.13.3e-3529.37 plant U-box 24[more]
AT3G19380.11.6e-3430.96 plant U-box 25[more]
AT5G37490.16.5e-3129.06 ARM repeat superfamily protein[more]
BLAST of CmoCh06G011970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433143|ref|XP_004134357.1|7.6e-19186.60PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus][more]
gi|659075605|ref|XP_008438233.1|3.8e-19087.10PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis melo][more]
gi|645252683|ref|XP_008232231.1|4.5e-12758.25PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Prunus mume][more]
gi|657950220|ref|XP_008346772.1|1.0e-12657.66PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Malus domestica][more]
gi|470146246|ref|XP_004308738.1|2.5e-12557.35PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR003613Ubox_domain
IPR011989ARM-like
IPR013083Znf_RING/FYVE/PHD
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005488 binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G011970.1CmoCh06G011970.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 508..531
score: 0.062coord: 536..560
score: 0.0052coord: 443..469
score:
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 440..474
score: 8.572coord: 503..537
score: 7
IPR003613U box domainPFAMPF04564U-boxcoord: 6..75
score: 1.8
IPR003613U box domainSMARTSM00504Ubox_2coord: 8..74
score: 2.2
IPR003613U box domainPROFILEPS51698U_BOXcoord: 4..81
score: 22
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 86..387
score: 1.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 4..75
score: 5.5
IPR016024Armadillo-type foldunknownSSF48371ARM repeatcoord: 85..363
score: 3.46
NoneNo IPR availablePANTHERPTHR22849WDSAM1 PROTEINcoord: 1..401
score: 2.4E
NoneNo IPR availablePANTHERPTHR22849:SF23SUBFAMILY NOT NAMEDcoord: 1..401
score: 2.4E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 3..77
score: 2.47

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G011970Cucsa.257190Cucumber (Gy14) v1cgycmoB0718
CmoCh06G011970Cucsa.362460Cucumber (Gy14) v1cgycmoB1007
CmoCh06G011970CmaCh00G006650Cucurbita maxima (Rimu)cmacmoB018
CmoCh06G011970CmaCh14G019510Cucurbita maxima (Rimu)cmacmoB271
CmoCh06G011970CmaCh17G000580Cucurbita maxima (Rimu)cmacmoB362
CmoCh06G011970CmaCh06G012110Cucurbita maxima (Rimu)cmacmoB830
CmoCh06G011970Cla006990Watermelon (97103) v1cmowmB801
CmoCh06G011970Cla021350Watermelon (97103) v1cmowmB793
CmoCh06G011970Csa3G127120Cucumber (Chinese Long) v2cmocuB806
CmoCh06G011970Csa6G079190Cucumber (Chinese Long) v2cmocuB829
CmoCh06G011970MELO3C022470Melon (DHL92) v3.5.1cmomeB740
CmoCh06G011970MELO3C006236Melon (DHL92) v3.5.1cmomeB755
CmoCh06G011970ClCG06G000710Watermelon (Charleston Gray)cmowcgB745
CmoCh06G011970CSPI03G10010Wild cucumber (PI 183967)cmocpiB814
CmoCh06G011970CSPI06G06170Wild cucumber (PI 183967)cmocpiB839
CmoCh06G011970Lsi05G019150Bottle gourd (USVL1VR-Ls)cmolsiB757
CmoCh06G011970Lsi09G018730Bottle gourd (USVL1VR-Ls)cmolsiB735
CmoCh06G011970Cp4.1LG12g00450Cucurbita pepo (Zucchini)cmocpeB765
CmoCh06G011970Cp4.1LG03g17500Cucurbita pepo (Zucchini)cmocpeB787
CmoCh06G011970Cp4.1LG08g02200Cucurbita pepo (Zucchini)cmocpeB796
CmoCh06G011970MELO3C022470.2Melon (DHL92) v3.6.1cmomedB842
CmoCh06G011970MELO3C006235.2Melon (DHL92) v3.6.1cmomedB857
CmoCh06G011970CsaV3_6G006500Cucumber (Chinese Long) v3cmocucB0980
CmoCh06G011970CsaV3_3G010150Cucumber (Chinese Long) v3cmocucB0953
CmoCh06G011970Cla97C05G083200Watermelon (97103) v2cmowmbB833
CmoCh06G011970Cla97C06G109960Watermelon (97103) v2cmowmbB836
CmoCh06G011970Bhi12G002247Wax gourdcmowgoB1001
CmoCh06G011970CsGy6G006180Cucumber (Gy14) v2cgybcmoB834
CmoCh06G011970CsGy3G010100Cucumber (Gy14) v2cgybcmoB401
CmoCh06G011970Carg06348Silver-seed gourdcarcmoB1288
CmoCh06G011970Carg14871Silver-seed gourdcarcmoB0852
CmoCh06G011970Carg10178Silver-seed gourdcarcmoB0322
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh06G011970CmoCh14G020110Cucurbita moschata (Rifu)cmocmoB224
CmoCh06G011970CmoCh17G000580Cucurbita moschata (Rifu)cmocmoB308
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G011970Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G011970Watermelon (Charleston Gray)cmowcgB743
CmoCh06G011970Wax gourdcmowgoB1006