CmoCh06G011260 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G011260
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Signal recognition particle 54 kDa protein, chloroplast, putative, expressed
Location	Cmo_Chr06 : 8664859 .. 8671050 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGACGTTTACCGAAGGTAGTTGGTTTATCCATTTGGCTCTGAAACATTCCGTTCTCGGAGCTGTAACAAAAATGGCCGCGGCCTCACTCTCTCATCTCTCCTTTCTCTCAAACCCTTCACCTCGAAGCTTGATCGTTCCATCTCTCCGGCTGACTTCTCCTTCCAGGAAAGGCCGCGTCGGTGGTTCTCGATTCAGATGCTCCGCTGGTCAGACGGGATTCTTCACTCGGCTTGGCAGGCTGCTTAAGGAGAAGGCCAAAAGCGATGTCGAGAAGGTCTTCTCAGGCTTCTCAAAGACTCGAGACAATCTTGCTGTTATTGATGAGCTTCTTCTTTACTGGAACCTCGCGGAGACCGATAGAGTTCTCGATGAACTCGAAGAGGTCAGTATTCTGTTCCTGCTCTATTTTCTCTCTTTTGTTTTATGTTCGTCTCAAGGAAGTATTGCCTACTTAGGAAACTGTTCTGTTCAGGAATTCTTGGATTTTTTGAACTCCAATTTGTCAAATCTAATCTAATCCACTGTTCTGAATGTGGATTCCACGGAGGTGTAATTCGATTTTGGTTTACATATGTCTCTTATCTTACAACTTCCCTCAGGTCTTTATTTCCGAGAATGAGCTTAAATCCAACCTTCTTTCAGACCTGAATTTTTGTATGGCTTGAATGTTAGTAATTGAGCTATTTTCTTGTTACTGATATAAGTAGTCCTTTTAATACTGGAGTCTATCGGAAAAATCATTTGTAAGCCGGATGAAATTCCATGGTTAATCGTAGTGTTGATAATCTTGTAGGCATTATTGGTGTCTGATTTCGGGCCGAGGATCACCATTAAGATCGTGGAGAGCTTGCGTGACGACATATTGTCTGGGAAGCTAAAATCGGGTAGTGAAATAAAGGTAATTAGTTCACGAATTGTTTCATTACTCTGTGTTCTAAGAAAGAAAGGCTTACTACACGGAAATGAATTAATAATTATTGCGTTAAACGTTAAATGAAGCTCTAGCGGCACAGTGAGCAATTTACCTCTCTTTCTGCTTGGAATTGGAATTCGTTTCATTTGGAGAAATTTCTATTATGAAAATTTTTATACTCATTTAAGTTTGTCGATGAAAAATTTTATGTACTGCTCTGAGTTTTGAATCATGGAATTTGGATTTAATTTTTGAAGTGGTAGTTTGGTTGATGATCGCCAATTTGATGAAAGAAATGCTTTAGATTCCAAGTTTGGTTTTCAATTCTATATTTTTATATCCATATAGTTTGTAACGCTTGATTGAACTTGTAATACACTGATCAAAACGATCCCAGGATGCCTTAAAGAAGAATGTGTTGGAGTTGTTGAAAGGGAAGGGGAGCAAAACCGAACTTCAACTTGGATTCCGGTCTACTTTCTTTTTGGTTTCTAGTTTGTGCAATCTATCTAACTAAGCGCAATATCTCAAGCACTAACTCCGATTCTGCTTTTATCATGTCATCAGTAAACCGGCCGTGATTATGATAGTTGGTGTTAACGGAGGTGGAAAGACAACATCTCTTGGTAAGACCTAGCATTAACATGGTATGAGTATTCTATTGAGTTTAAACCTCATTTCTTGTGATAATTTCTTGTGATAATTTCTTGGCAGAAGTTCTTACGTAGTTTTGAGGATATTTACTTGGATTTTCATGCGGCCTGACTCGTAAAAATATATATATATATATGGCTCGAACATAATATATTTCCTTTTAAAAGCATGTTAAATATACTTTCCCATTTATTTGTTGCAATTTCATTATTACTACTCCAGTAAGACAAGTTTAGGAAATTAAAATGACCTCATATTGCATAAGGTTAAGCTATCTACTTCTCTGTCTATTTGCTAAATTGGGATATATTTATTTGCGGTGCTATTACTCAAATTACCCAGTAATATCTTTTCAACTCCATGTTGCAGGAAAGCTGGCTTTTAGACTAAAAAACGAAGGAGCCAAGGTTAGATGATCTTCTTACCCTTCTAAGTGGAAGTTACTTTCTTATTTAAAAAAGTAACTCGATGGAAATATAGTAATTTACATTTTTGTGTGCCAGATATTGATGGCAGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGCTGGAAATCTGGGCAGAGAGATGTGGATGTGAGATTGTTGTTGCTGAAAAGGACAATGCCAAGGCGTCATCAGGTATGCAGTAGTTATAGTGCTCTGTTTCTTTTTCTTGACATTGTAATGTTTGAGGAAGTTTGTATCATATACTGTGGATGCTAACTTATCCTCTTGAAGTGTTTCCCTGATAGTTCTATCACAGGCTGTAAAGAAAGGAAAAGAAGGTGGTTTTGACATTGTTTTGTGTGATACATCTGGACGTAAGTATATGTAGTGTATCGGCTTACTGTTAGTATTCTTTCTTGTGTCTTCTTAATAGATGAAAATCTTGGTTTTTTTTTTTTTTCATAGGTCTGCATACAAATTATAGTTTGATGGAAGAGTTAATAGCATGCAAGAAAGCTGTGAAAAAAGTTATGCCCGGGGCACCTAATGTAAGCATTACTATTTTTTCGTTTTACCTTGTTGACTTGTTCTATTTCAAAAGCCGGATGTGTAGGCATTTACACTTCTAGACTGCATAAGCCATTCAATTTTCCTTCAACATTATCATGCGTGACTACCCAGTATTAAGTGAAAGTCTGAAGTTTTAACCTAGTAATAAAGACATATTTTTGTATAGCGTAAAGGCTCTTGTCAAGACTTCAATGAGTGCAACTGCAAAGCTTTTTTCTTGTATTTTCGGTGTAGGGATTTGCACTTTACACTTGCATAAGCATTTAATTTATCTTCGACGTTATTATGCACGGGACTGTGGGGTGAGTGGCACCTTTTCTTTGAGATTTCTTCTCTTTTCCTCCAATGCTTTCGGCTGTTAGCTGAGGTTAAAATCAAACTTGATTTCTGTGTTAGGAAAATAATTTATTTAAATATGACACTATTAGTTGTAAGGCAGATGATACTCAGATCACTGAAAATTCCATTTTTCTACTTTGTTATTATTACCTCATTCAGGCCAACACTGCTTCCCATGAAATTTATGGTTCAAGCAGATATGAAGAATTTTATAAAAGTTGGATATCTGGTCATTAAAATGAAATTCTACGTAGTATCATGTACTTATTAAGAGTTTCATTACAATTGCAGGAGATCCTGCAGGTATTGGATGGGACAACTGGTTTGAATATGCTACCACAAGCAAGGGAGTTCAATGATGTAACTTTTACTATCCTTTTCCTTCTAAATGAATATTCTTGGATGACACGCATCATTTCTTGCCATTTTGCAAGTTTTCGTTCACGATTTCCCCAAAAGTAAAATATAGCATCATCTGCTGAGTACAATATATGCATGTGGATTATTATATTTATGTGTCTTTTACCTTGGGGCAAGTATTCTTGAAACATAATAGCTAATGGAGTTCTTAGCATGTTGCAATCCTGCTTGTAGTTACCAAGAAATTTCAATTGACAAGCTTGTTGGCTTCTGTAACAGGTAGTTGGAATTACTGGTTTAATTTTGACAAAACTTGATGGTTCTGCAAGAGGTGGTTGTGTGGTATGCCTTAAAATTCTGAGATGAACAACTTCCTGAAATGACATGACCGCCAACTACTCTCTGATGATATAATCCTTCTTTCTCAGGTCAGTGTGGTCGACGAGCTTGGCATCCCTGTAAAGTTTGTTGGCGTTGGTGAAGGGTTAGAAGATCTTCAACCTTTTGATCCAGAGGCCTTCGTTGATGCCATATTTTCATGATGTGTACAATATGGTCAGTATCAATATCACTACCATCAATATCTCCTTTCACCACTGTGTCACAATTTGTCTGCATTCCTTCTAAAGTCTACCCATCTCATTCGTAAAGTTCAGTAAGCTCATAAGGTTTCATCCATGATTCAACTCAGTGTGTTAGTAACTTGGTTCTAGGTGATGAAGTAGCTTATCGTCATTATTTCATGCTATTTATTAGTATGCTGACTTGATCATTTTTATTTTTGATCAGAAAAATCTTCCAATAATTGCGTCACTTTTAAATTTTATAAGATAATAGCTGAAAAGAGCGTGCCCTTGCATTGCATTGTGGAAGACTATCTCTTGAATATTGATGTTAAACAGACATAGGATTTTTTTTGGAAAAATTGCAAACCACTCCTGAAATCACATCTCTGAATTTTTAATTTCATCATTCAGTCCTCTATATTTTGTTAAGTGTTGCGATCAACCCCTTATGTTAGTTGTTAGATTACCTTTTAATTGAGCTTCACATGTGTAACGGCCCAGTTCCACCGCTAGCAGATATTGTCCTCTTTAGGCTTTCCCTTTCGGGCTCCCCCTCAATGCTTTAAAACACGTATGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGATTTGTTCTCCTCCTCAACCAACGTGGGATATCACAACATGTGTGACTCACACGTTAGTAGAGAATAGCACACTTGTTGTAACACTTAACAAAGTATAGTAAACTCATTGATCAAATTAGAAATTAGAGGATTGTCATGGCAATTTTTCTAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAAGATATATTTATACATTAATGTTTTTTTGCTACTACAGATTTCTCGTTTGTGATCCACCCAATTTTGCACCCCAAGCAACATCACCAGGCTCTAGCACAGGGTGCAAACCATAATATTGGTTTGAAATTGAAGCAGAAAAATTTGCTGCCTGCGATTCTATTGGTTGAGCAAGTGGAAACCTGAAAAATGCATAGATCTCTCACATCTGTGGTTTTGATGTCCATACTTCAACAGCAAAAAGGCGTCTCCTGGTTGATTGGTAAGATTCTCAGGTCCAGTTGAACTCTCATAACCATATACGTATTGAAACTCCTAAGAGCTTGGTGCCTCCTTTTTTTAACCATTGGCATTCATAATTGAATTATGTTTGATGCCATTATCTGTTTTGTTTTCAGTGTTGATTTCTTCAAGTCTCTATCGTATTTCCTGTATCGATACTATGTCGTTTGTTAAATTTTGTGTTCCATTGAATAGGATAAATATAATCGAAAGAGAAAAATACTCTTTTGGTCTCTGAAATTTGAGTTAGGTTCCATTTGGGTTGTGGCTTGCTTATGGATTGTGTTAAGTTGGGGAGGGGGTGTTGTTGATGCTGGAGGAACATATCTAAGTGAACTTCTCAAGCCTGCTAGAAGTATGGTGCTTATGTGCAACATATATCTACAAACTTCAAACTCCTTCACTCAGTGCGCTACTTTCACTTCAACCACCCTGTTCTTATACAACATTGTGAGAATTATGTGTCGAGTTCTGTCTCCAACCAGCTCCTGAGCGAGTTATCTAAAGATGGTCGAGTTGACGAAGCGCGTAAGTTATCTATAAACTTCAGCTCATGGAATATTATGATTTCTGCTTAATGCCCAATCGGGAGATCCTTTTCCATGAATCTCCAACTAAAATTCTATCACTTGGTCATCCCTGGTATATGGATATTGCCGAGATGGGTGTGAAGCTGAAGGCTTGAGACTATTCAGCCAAATGTGGAGTTTAGGGCAAATTTATTCATTGCTATGTAAAGAAGATCCAATTAGAAAGCTATGATCTTTGTTGCCACTGGTCTTGTTGACATATTTTCCATCACTTCGAAGGGGGGAAATGGTCAGCTCCTTGGAGAAAGAACCGAC

mRNA sequence

TGACGTTTACCGAAGGTAGTTGGTTTATCCATTTGGCTCTGAAACATTCCGTTCTCGGAGCTGTAACAAAAATGGCCGCGGCCTCACTCTCTCATCTCTCCTTTCTCTCAAACCCTTCACCTCGAAGCTTGATCGTTCCATCTCTCCGGCTGACTTCTCCTTCCAGGAAAGGCCGCGTCGGTGGTTCTCGATTCAGATGCTCCGCTGGTCAGACGGGATTCTTCACTCGGCTTGGCAGGCTGCTTAAGGAGAAGGCCAAAAGCGATGTCGAGAAGGTCTTCTCAGGCTTCTCAAAGACTCGAGACAATCTTGCTGTTATTGATGAGCTTCTTCTTTACTGGAACCTCGCGGAGACCGATAGAGTTCTCGATGAACTCGAAGAGGCATTATTGGTGTCTGATTTCGGGCCGAGGATCACCATTAAGATCGTGGAGAGCTTGCGTGACGACATATTGTCTGGGAAGCTAAAATCGGGTAGTGAAATAAAGGATGCCTTAAAGAAGAATGTGTTGGAGTTGTTGAAAGGGAAGGGGAGCAAAACCGAACTTCAACTTGGATTCCGTAAACCGGCCGTGATTATGATAGTTGGTGTTAACGGAGGTGGAAAGACAACATCTCTTGGAAAGCTGGCTTTTAGACTAAAAAACGAAGGAGCCAAGATATTGATGGCAGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGCTGGAAATCTGGGCAGAGAGATGTGGATGTGAGATTGTTGTTGCTGAAAAGGACAATGCCAAGGCGTCATCAGTTCTATCACAGGCTGTAAAGAAAGGAAAAGAAGGTGGTTTTGACATTGTTTTGTGTGATACATCTGGACGTCTGCATACAAATTATAGTTTGATGGAAGAGTTAATAGCATGCAAGAAAGCTGTGAAAAAAGTTATGCCCGGGGCACCTAATGAGATCCTGCAGGTATTGGATGGGACAACTGGTTTGAATATGCTACCACAAGCAAGGGAGTTCAATGATGTAGTTGGAATTACTGGTTTAATTTTGACAAAACTTGATGGTTCTGCAAGAGGTGGTTGTGTGGTCAGTGTGGTCGACGAGCTTGGCATCCCTGTAAAGTTTGTTGGCGTTGGTGAAGGGTTAGAAGATCTTCAACCTTTTGATCCAGAGGCCTTCGTTGATGCCATATTTTCATGATGTGTACAATATGATTTCTCGTTTGTGATCCACCCAATTTTGCACCCCAAGCAACATCACCAGGCTCTAGCACAGGGTGCAAACCATAATATTGGTTTGAAATTGAAGCAGAAAAATTTGCTGCCTGCGATTCTATTGGTTGAGCAAGTGGAAACCTGAAAAATGCATAGATCTCTCACATCTGTGGTTTTGATGTCCATACTTCAACAGCAAAAAGGCGTCTCCTGGTTGATTGGTAAGATTCTCAGGTCCAGTTGAACTCTCATAACCATATACGTATTGAAACTCCTAAGAGCTTGGTGCCTCCTTTTTTTAACCATTGGCATTCATAATTGAATTATGTTTGATGCCATTATCTGTTTTGTTTTCAGTGTTGATTTCTTCAAGTCTCTATCGTATTTCCTGTATCGATACTATGTCGTTTGTTAAATTTTGTGTTCCATTGAATAGGATAAATATAATCGAAAGAGAAAAATACTCTTTTGGTCTCTGAAATTTGAGTTAGGTTCCATTTGGGTTGTGGCTTGCTTATGGATTGTGTTAAGTTGGGGAGGGGGTGTTGTTGATGCTGGAGGAACATATCTAAGTGAACTTCTCAAGCCTGCTAGAAGTATGGTGCTTATGTGCAACATATATCTACAAACTTCAAACTCCTTCACTCAGTGCGCTACTTTCACTTCAACCACCCTGTTCTTATACAACATTGTGAGAATTATGTGTCGAGTTCTGTCTCCAACCAGCTCCTGAGCGAGTTATCTAAAGATGGTCGAGTTGACGAAGCGCGTAAGTTATCTATAAACTTCAGCTCATGGAATATTATGATTTCTGCTTAATGCCCAATCGGGAGATCCTTTTCCATGAATCTCCAACTAAAATTCTATCACTTGGTCATCCCTGGTATATGGATATTGCCGAGATGGGTGTGAAGCTGAAGGCTTGAGACTATTCAGCCAAATGTGGAGTTTAGGGCAAATTTATTCATTGCTATGTAAAGAAGATCCAATTAGAAAGCTATGATCTTTGTTGCCACTGGTCTTGTTGACATATTTTCCATCACTTCGAAGGGGGGAAATGGTCAGCTCCTTGGAGAAAGAACCGAC

Coding sequence (CDS)

ATGGCCGCGGCCTCACTCTCTCATCTCTCCTTTCTCTCAAACCCTTCACCTCGAAGCTTGATCGTTCCATCTCTCCGGCTGACTTCTCCTTCCAGGAAAGGCCGCGTCGGTGGTTCTCGATTCAGATGCTCCGCTGGTCAGACGGGATTCTTCACTCGGCTTGGCAGGCTGCTTAAGGAGAAGGCCAAAAGCGATGTCGAGAAGGTCTTCTCAGGCTTCTCAAAGACTCGAGACAATCTTGCTGTTATTGATGAGCTTCTTCTTTACTGGAACCTCGCGGAGACCGATAGAGTTCTCGATGAACTCGAAGAGGCATTATTGGTGTCTGATTTCGGGCCGAGGATCACCATTAAGATCGTGGAGAGCTTGCGTGACGACATATTGTCTGGGAAGCTAAAATCGGGTAGTGAAATAAAGGATGCCTTAAAGAAGAATGTGTTGGAGTTGTTGAAAGGGAAGGGGAGCAAAACCGAACTTCAACTTGGATTCCGTAAACCGGCCGTGATTATGATAGTTGGTGTTAACGGAGGTGGAAAGACAACATCTCTTGGAAAGCTGGCTTTTAGACTAAAAAACGAAGGAGCCAAGATATTGATGGCAGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGCTGGAAATCTGGGCAGAGAGATGTGGATGTGAGATTGTTGTTGCTGAAAAGGACAATGCCAAGGCGTCATCAGTTCTATCACAGGCTGTAAAGAAAGGAAAAGAAGGTGGTTTTGACATTGTTTTGTGTGATACATCTGGACGTCTGCATACAAATTATAGTTTGATGGAAGAGTTAATAGCATGCAAGAAAGCTGTGAAAAAAGTTATGCCCGGGGCACCTAATGAGATCCTGCAGGTATTGGATGGGACAACTGGTTTGAATATGCTACCACAAGCAAGGGAGTTCAATGATGTAGTTGGAATTACTGGTTTAATTTTGACAAAACTTGATGGTTCTGCAAGAGGTGGTTGTGTGGTCAGTGTGGTCGACGAGCTTGGCATCCCTGTAAAGTTTGTTGGCGTTGGTGAAGGGTTAGAAGATCTTCAACCTTTTGATCCAGAGGCCTTCGTTGATGCCATATTTTCATGA

Homology

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BLAST of CmoCh06G011260 vs. Swiss-Prot
Match: CFTSY_ARATH (Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis thaliana GN=CPFTSY PE=1 SV=2)

HSP 1 Score: 568.5 bits (1464), Expect = 5.2e-161
Identity = 301/369 (81.57%), Postives = 332/369 (89.97%), Query Frame = 1


Query: 3   AASLSHLSFLSNP-SPRSLIVPSLRLTSPSRKG--RVGGSRFRCSAGQTGFFTRLGRLLK 62
           A S +HLSFL+   SP S    S R+     +G  R   +RFRCSAG +GFFTRLGRL+K
Sbjct: 2   ATSSAHLSFLAGRISPFS----SERIGLFPLRGEFRPRMTRFRCSAGPSGFFTRLGRLIK 61

Query: 63  EKAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKI 122
           EKAKSDVEKVFSGFSKTR+NLAVIDELLL+WNLAETDRVLDELEEALLVSDFGP+IT++I
Sbjct: 62  EKAKSDVEKVFSGFSKTRENLAVIDELLLFWNLAETDRVLDELEEALLVSDFGPKITVRI 121

Query: 123 VESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGK 182
           VE LR+DI+SGKLKSGSEIKDALK++VLE+L  K SKTELQLGFRKPAVIMIVGVNGGGK
Sbjct: 122 VERLREDIMSGKLKSGSEIKDALKESVLEMLAKKNSKTELQLGFRKPAVIMIVGVNGGGK 181

Query: 183 TTSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLS 242
           TTSLGKLA RLKNEG K+LMAAGDTFRAAASDQLEIWAER GCEIVVAE D AKA++VLS
Sbjct: 182 TTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGDKAKAATVLS 241

Query: 243 QAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGL 302
           +AVK+GKE G+D+VLCDTSGRLHTNYSLMEELIACKKAV K++ GAPNEIL VLDG TGL
Sbjct: 242 KAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGL 301

Query: 303 NMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDP 362
           NMLPQAREFN+VVGITGLILTKLDGSARGGCVVSVV+ELGIPVKF+GVGE +EDLQPFDP
Sbjct: 302 NMLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAVEDLQPFDP 361

Query: 363 EAFVDAIFS 369
           EAFV+AIFS
Sbjct: 362 EAFVNAIFS 366

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BLAST of CmoCh06G011260 vs. Swiss-Prot
Match: FTSY_AQUAE (Signal recognition particle receptor FtsY OS=Aquifex aeolicus (strain VF5) GN=ftsY PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.1e-70
Identity = 142/320 (44.38%), Postives = 217/320 (67.81%), Query Frame = 1


Query: 50  FFTRLGR---LLKEKAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEAL 109
           F T+L +   L++EK +S ++K+  G  KT++    ++  +L+      +   +ELEE L
Sbjct: 146 FITQLKKELGLIEEKKESILDKLRRGLQKTKE---AVEFGVLFRGRKVDEEFFEELEEML 205

Query: 110 LVSDFGPRITIKIVESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKP 169
           + +D G +  +++ E LR + +   +K G +IK+ LKK + ELLK    + EL++  +  
Sbjct: 206 VKADVGVKTAVELTEKLRKEAIRKNIKEGEKIKELLKKELKELLKN--CQGELKIPEKVG 265

Query: 170 AVIMIVGVNGGGKTTSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVV 229
           AV++ VGVNG GKTT++GKLA +LK +G K+L+ AGDTFRAAA +QLE+WA+R G +IV 
Sbjct: 266 AVLLFVGVNGSGKTTTIGKLAHQLKQKGKKVLLVAGDTFRAAAIEQLEVWAKRAGVDIVK 325

Query: 230 AEKDNAKASSVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAP 289
            E + +   +V+ + +KK KE G+++VL DT+GRLHT   L+ EL   KK ++K     P
Sbjct: 326 KE-EGSDPGAVVYEGMKKAKEEGYEVVLVDTAGRLHTKEPLINELRKIKKVIQKFDKEEP 385

Query: 290 NEILQVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVG 349
           +E L V+D TTG N + QA+ F + V ITG+++TKLDGSA+GG VV++  EL IP+K VG
Sbjct: 386 SETLLVIDATTGQNAIQQAKVFKEAVDITGIVVTKLDGSAKGGAVVAICRELKIPIKLVG 445

Query: 350 VGEGLEDLQPFDPEAFVDAI 367
           VGEG++DLQPFD +A+V+A+
Sbjct: 446 VGEGIDDLQPFDADAYVEAL 459

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BLAST of CmoCh06G011260 vs. Swiss-Prot
Match: FTSY_BACSU (Signal recognition particle receptor FtsY OS=Bacillus subtilis (strain 168) GN=ftsY PE=1 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 6.1e-61
Identity = 123/321 (38.32%), Postives = 205/321 (63.86%), Query Frame = 1


Query: 50  FFTRLGRLLKEKAKSDVEKVFSGFSKTRDNLA-VIDELLLYWNLAETDRVLDELEEALLV 109
           FF +L   + ++  S  EK   G  KTR++    +++L+  +   + D   +ELEE L+ 
Sbjct: 3   FFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDED-FFEELEEVLIS 62

Query: 110 SDFGPRITIKIVESLRDDILSGKLKSGSEIKDALKKNVLELLK-GKGSKTELQLGFRKPA 169
           +D G    +++++ L+ ++    ++   E++  + + ++E+   G    +EL +   +  
Sbjct: 63  ADVGFTTVMELIDELKKEVKRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLN 122

Query: 170 VIMIVGVNGGGKTTSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVA 229
           VI++VGVNG GKTT++GKLA ++K EG  +++AAGDTFRA A +QLE+W ER G   V+ 
Sbjct: 123 VILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFRAGAIEQLEVWGERTGVP-VIK 182

Query: 230 EKDNAKASSVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPN 289
           +   +  ++V+  AV   K    D+++CDT+GRL    +LM+EL   K+ +++ +P AP+
Sbjct: 183 QTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH 242

Query: 290 EILQVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGV 349
           E+L  LD TTG N + QA+EF+    +TG+ LTKLDG+A+GG V+++ +EL IPVK VG+
Sbjct: 243 EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGL 302

Query: 350 GEGLEDLQPFDPEAFVDAIFS 369
           GE ++DLQ FDPE++V  +FS
Sbjct: 303 GEKVDDLQEFDPESYVYGLFS 321

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BLAST of CmoCh06G011260 vs. Swiss-Prot
Match: FTSY_NEIMA (Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=ftsY PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.1e-60
Identity = 127/296 (42.91%), Postives = 190/296 (64.19%), Query Frame = 1


Query: 72  GFSKTRDNLAVIDELLLYWNLAETDRVL-DELEEALLVSDFGPRITIKIVESLRDDILSG 131
           G +K+RD +A    L   +   + D  L +ELE  L+ SD G   T  +++ +RD +   
Sbjct: 129 GLTKSRDKMA--KSLAGVFGGGQIDEDLYEELETVLITSDMGMEATEYLMKDVRDRVSLK 188

Query: 132 KLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRL 191
            LK G+E++ ALK+ + +L+K       L    ++P VIM+ G+NG GKTTS+GKLA   
Sbjct: 189 GLKDGNELRGALKEALYDLIKPLEKPLVLP-ETKEPFVIMLAGINGAGKTTSIGKLAKYF 248

Query: 192 KNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQAVKKGKEGGF 251
           + +G  +L+AAGDTFRAAA +QL+ W ER    + V  +    +++V   AV+  K  G 
Sbjct: 249 QAQGKSVLLAAGDTFRAAAREQLQAWGERNN--VTVISQTTGDSAAVCFDAVQAAKARGI 308

Query: 252 DIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAREFND 311
           DIVL DT+GRL T   LMEE+   K+ ++K MP AP+EI+ VLD   G N + Q + F+D
Sbjct: 309 DIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDD 368

Query: 312 VVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAI 367
            +G+TGLI+TKLDG+A+GG + ++  +  +PV+++GVGEG++DL+PFD  AFVDA+
Sbjct: 369 ALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDAL 419

[Close]

BLAST of CmoCh06G011260 vs. Swiss-Prot
Match: FTSY_NEIMB (Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup B (strain MC58) GN=ftsY PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.1e-60
Identity = 127/296 (42.91%), Postives = 190/296 (64.19%), Query Frame = 1


Query: 72  GFSKTRDNLAVIDELLLYWNLAETDRVL-DELEEALLVSDFGPRITIKIVESLRDDILSG 131
           G +K+RD +A    L   +   + D  L +ELE  L+ SD G   T  +++ +RD +   
Sbjct: 129 GLTKSRDKMA--KSLAGVFGGGQIDEDLYEELETVLITSDMGMEATEYLMKDVRDRVSLK 188

Query: 132 KLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRL 191
            LK G+E++ ALK+ + +L+K       L    ++P VIM+ G+NG GKTTS+GKLA   
Sbjct: 189 GLKDGNELRGALKEALYDLIKPLEKPLVLP-ETKEPFVIMLAGINGAGKTTSIGKLAKYF 248

Query: 192 KNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQAVKKGKEGGF 251
           + +G  +L+AAGDTFRAAA +QL+ W ER    + V  +    +++V   AV+  K  G 
Sbjct: 249 QAQGKSVLLAAGDTFRAAAREQLQAWGERNN--VTVISQTTGDSAAVCFDAVQAAKARGI 308

Query: 252 DIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAREFND 311
           DIVL DT+GRL T   LMEE+   K+ ++K MP AP+EI+ VLD   G N + Q + F+D
Sbjct: 309 DIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDD 368

Query: 312 VVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAI 367
            +G+TGLI+TKLDG+A+GG + ++  +  +PV+++GVGEG++DL+PFD  AFVDA+
Sbjct: 369 ALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDAL 419

[Close]

BLAST of CmoCh06G011260 vs. TrEMBL
Match: A0A0A0L8Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122650 PE=4 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 2.4e-189
Identity = 348/368 (94.57%), Postives = 358/368 (97.28%), Query Frame = 1


Query: 1   MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60
           MAAASLS LSFLSNPSPRSL VPSLR T+P R+    GSRFRCSAGQTGFFTRLGRLLKE
Sbjct: 1   MAAASLSQLSFLSNPSPRSLFVPSLRPTTPFRRIHGDGSRFRCSAGQTGFFTRLGRLLKE 60

Query: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120
           KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV
Sbjct: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120

Query: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180
           +SLRDDIL+GKLKSGSEIK+ALKKNVLELLKGKGSKT+LQLGFRKPAVIMIVGVNGGGKT
Sbjct: 121 DSLRDDILAGKLKSGSEIKEALKKNVLELLKGKGSKTDLQLGFRKPAVIMIVGVNGGGKT 180

Query: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQ 240
           TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWA+R GCEIVVAEK+NAKASSVLSQ
Sbjct: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWADRTGCEIVVAEKENAKASSVLSQ 240

Query: 241 AVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLN 300
           AVK+GKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAV KV+PGAPNEILQVLDGTTGLN
Sbjct: 241 AVKRGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVAKVIPGAPNEILQVLDGTTGLN 300

Query: 301 MLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPE 360
           MLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPE
Sbjct: 301 MLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPE 360

Query: 361 AFVDAIFS 369
           AFVDAIFS
Sbjct: 361 AFVDAIFS 368

[Close]

BLAST of CmoCh06G011260 vs. TrEMBL
Match: A0A061DTJ5_THECC (Signal recognition particle receptor protein isoform 1 OS=Theobroma cacao GN=TCM_005404 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 5.2e-168
Identity = 313/361 (86.70%), Postives = 332/361 (91.97%), Query Frame = 1


Query: 7   SHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKEKAKSDV 66
           + LS +S PSP    +P  R  +PS   R   SRF+C A QTGFFTRLGRL+KEKAKSDV
Sbjct: 85  TQLSLISKPSPLFSNLPRTRF-NPSTTARPTASRFKCLASQTGFFTRLGRLIKEKAKSDV 144

Query: 67  EKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLRDD 126
           EK+FSGFSKTRDNLAVIDELLLYWNLA+TDRVLDELEEALLVSDFGPRITIKIVESLR+D
Sbjct: 145 EKIFSGFSKTRDNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPRITIKIVESLRED 204

Query: 127 ILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKL 186
           ILSGKLKSGSEIKDALKK VL+LL  KGSKTEL+LGFRKPAVIMIVGVNGGGKTTSLGKL
Sbjct: 205 ILSGKLKSGSEIKDALKKCVLDLLTKKGSKTELRLGFRKPAVIMIVGVNGGGKTTSLGKL 264

Query: 187 AFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQAVKKGK 246
           A+RLKNEGAKILMAAGDTFRAAASDQLEIWAER GCEIVVAEK+NAKASSVLSQAVK+GK
Sbjct: 265 AYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEKENAKASSVLSQAVKRGK 324

Query: 247 EGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAR 306
           E GFDIVLCDTSGRLHTN+SLMEELIACKKAV KV+PGAPNEIL VLDG TGLNMLPQAR
Sbjct: 325 EKGFDIVLCDTSGRLHTNFSLMEELIACKKAVGKVIPGAPNEILLVLDGNTGLNMLPQAR 384

Query: 307 EFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAI 366
           EFN+VVGITG ILTKLDGSARGGCVVSVVDELGIPVKF+GVGEGLEDLQPFD EAFV+AI
Sbjct: 385 EFNEVVGITGFILTKLDGSARGGCVVSVVDELGIPVKFLGVGEGLEDLQPFDAEAFVNAI 444

Query: 367 F 368
           F
Sbjct: 445 F 444

[Close]

BLAST of CmoCh06G011260 vs. TrEMBL
Match: A0A061DVG5_THECC (Signal recognition particle receptor protein, chloroplast (FTSY) isoform 2 OS=Theobroma cacao GN=TCM_005404 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 5.2e-168
Identity = 313/361 (86.70%), Postives = 332/361 (91.97%), Query Frame = 1


Query: 7   SHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKEKAKSDV 66
           + LS +S PSP    +P  R  +PS   R   SRF+C A QTGFFTRLGRL+KEKAKSDV
Sbjct: 5   TQLSLISKPSPLFSNLPRTRF-NPSTTARPTASRFKCLASQTGFFTRLGRLIKEKAKSDV 64

Query: 67  EKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLRDD 126
           EK+FSGFSKTRDNLAVIDELLLYWNLA+TDRVLDELEEALLVSDFGPRITIKIVESLR+D
Sbjct: 65  EKIFSGFSKTRDNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPRITIKIVESLRED 124

Query: 127 ILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKL 186
           ILSGKLKSGSEIKDALKK VL+LL  KGSKTEL+LGFRKPAVIMIVGVNGGGKTTSLGKL
Sbjct: 125 ILSGKLKSGSEIKDALKKCVLDLLTKKGSKTELRLGFRKPAVIMIVGVNGGGKTTSLGKL 184

Query: 187 AFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQAVKKGK 246
           A+RLKNEGAKILMAAGDTFRAAASDQLEIWAER GCEIVVAEK+NAKASSVLSQAVK+GK
Sbjct: 185 AYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEKENAKASSVLSQAVKRGK 244

Query: 247 EGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAR 306
           E GFDIVLCDTSGRLHTN+SLMEELIACKKAV KV+PGAPNEIL VLDG TGLNMLPQAR
Sbjct: 245 EKGFDIVLCDTSGRLHTNFSLMEELIACKKAVGKVIPGAPNEILLVLDGNTGLNMLPQAR 304

Query: 307 EFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAI 366
           EFN+VVGITG ILTKLDGSARGGCVVSVVDELGIPVKF+GVGEGLEDLQPFD EAFV+AI
Sbjct: 305 EFNEVVGITGFILTKLDGSARGGCVVSVVDELGIPVKFLGVGEGLEDLQPFDAEAFVNAI 364

Query: 367 F 368
           F
Sbjct: 365 F 364

[Close]

BLAST of CmoCh06G011260 vs. TrEMBL
Match: A0A151UCJ2_CAJCA (Cell division protein ftsY isogeny OS=Cajanus cajan GN=KK1_021300 PE=4 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 1.7e-166
Identity = 309/366 (84.43%), Postives = 336/366 (91.80%), Query Frame = 1


Query: 3   AASLSHLSFLSNPSPR-SLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKEK 62
           +AS +  S +S  S     I+ ++   + +   R G +RFRCSAGQTGFFT+LGRLLKEK
Sbjct: 5   SASFARFSVISKLSSHPQFILFNIATPTGNPHSRTGAARFRCSAGQTGFFTKLGRLLKEK 64

Query: 63  AKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVE 122
           AKSDVEKVFSGFSKTR+NLAVIDELLLYWNLA+TDRVLDELEEALLVSDFGP+ITIKIVE
Sbjct: 65  AKSDVEKVFSGFSKTRNNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPKITIKIVE 124

Query: 123 SLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTT 182
           +LR+DILSGKLKSG+EIK+ALK+NVLELL  KGSKTELQLGFRKP+VIMIVGVNGGGKTT
Sbjct: 125 NLREDILSGKLKSGNEIKEALKRNVLELLTSKGSKTELQLGFRKPSVIMIVGVNGGGKTT 184

Query: 183 SLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQA 242
           SLGKLA+RLKNEGAKILMAAGDTFRAAASDQLEIWAER GCEIVVAE + AKASSVLSQA
Sbjct: 185 SLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAESEKAKASSVLSQA 244

Query: 243 VKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNM 302
           VKKGKE GFDIVLCDTSGRLHTNYSLMEELI+CKK+V KV+PGAPNEIL VLDGTTGLNM
Sbjct: 245 VKKGKELGFDIVLCDTSGRLHTNYSLMEELISCKKSVAKVIPGAPNEILLVLDGTTGLNM 304

Query: 303 LPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEA 362
           LPQAREFNDVVG+TGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEG+EDLQPFD EA
Sbjct: 305 LPQAREFNDVVGVTGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEA 364

Query: 363 FVDAIF 368
           FV+AIF
Sbjct: 365 FVNAIF 370

[Close]

BLAST of CmoCh06G011260 vs. TrEMBL
Match: V7ANV4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G093600g PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 2.8e-166
Identity = 306/366 (83.61%), Postives = 338/366 (92.35%), Query Frame = 1


Query: 3   AASLSHLSFLSNPSPRS-LIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKEK 62
           +ASL+    +S PS  S  I+ ++   + +   R G +RFRCSAGQTGFFT+LGRL+KEK
Sbjct: 5   SASLARFCVISRPSSNSQYILFNVAPRTGTPNSRTGSARFRCSAGQTGFFTKLGRLIKEK 64

Query: 63  AKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVE 122
           AKSDVEKVFSGFSKTR+NLAVIDELLLYWNLA+TDRVLDELEEALLVSDFGP+ITIKIVE
Sbjct: 65  AKSDVEKVFSGFSKTRNNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPKITIKIVE 124

Query: 123 SLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTT 182
           +LR+DILSGKLKSG+EIK+ALK+NVLELL  KGSKTELQLGFRKPAVIMIVGVNGGGKTT
Sbjct: 125 NLREDILSGKLKSGNEIKEALKRNVLELLTSKGSKTELQLGFRKPAVIMIVGVNGGGKTT 184

Query: 183 SLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQA 242
           SLGKLA+RLKNEGAKIL+AAGDTFRAAASDQLEIWAER GCEIV+AE + AKASSVLSQA
Sbjct: 185 SLGKLAYRLKNEGAKILLAAGDTFRAAASDQLEIWAERTGCEIVMAESEKAKASSVLSQA 244

Query: 243 VKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNM 302
           VKKGK+ GFD+VLCDTSGRLHTNYSLMEELI+CKK+V KV+PGAPNEIL VLDGTTGLNM
Sbjct: 245 VKKGKQLGFDVVLCDTSGRLHTNYSLMEELISCKKSVAKVIPGAPNEILLVLDGTTGLNM 304

Query: 303 LPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEA 362
           LPQAREFNDVVG+TGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEG+EDLQPFD +A
Sbjct: 305 LPQAREFNDVVGVTGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDADA 364

Query: 363 FVDAIF 368
           FV+AIF
Sbjct: 365 FVNAIF 370

[Close]

BLAST of CmoCh06G011260 vs. TAIR10
Match: AT2G45770.2 (AT2G45770.2 signal recognition particle receptor protein, chloroplast (FTSY))

HSP 1 Score: 561.6 bits (1446), Expect = 3.6e-160
Identity = 301/376 (80.05%), Postives = 332/376 (88.30%), Query Frame = 1


Query: 3   AASLSHLSFLSNP-SPRSLIVPSLRLTSPSRKG--RVGGSRFRCSAGQTGFFTRLGRLLK 62
           A S +HLSFL+   SP S    S R+     +G  R   +RFRCSAG +GFFTRLGRL+K
Sbjct: 2   ATSSAHLSFLAGRISPFS----SERIGLFPLRGEFRPRMTRFRCSAGPSGFFTRLGRLIK 61

Query: 63  EKAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKI 122
           EKAKSDVEKVFSGFSKTR+NLAVIDELLL+WNLAETDRVLDELEEALLVSDFGP+IT++I
Sbjct: 62  EKAKSDVEKVFSGFSKTRENLAVIDELLLFWNLAETDRVLDELEEALLVSDFGPKITVRI 121

Query: 123 VESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGK 182
           VE LR+DI+SGKLKSGSEIKDALK++VLE+L  K SKTELQLGFRKPAVIMIVGVNGGGK
Sbjct: 122 VERLREDIMSGKLKSGSEIKDALKESVLEMLAKKNSKTELQLGFRKPAVIMIVGVNGGGK 181

Query: 183 TTSL-------GKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNA 242
           TTSL       GKLA RLKNEG K+LMAAGDTFRAAASDQLEIWAER GCEIVVAE D A
Sbjct: 182 TTSLDSGFCFSGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGDKA 241

Query: 243 KASSVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV 302
           KA++VLS+AVK+GKE G+D+VLCDTSGRLHTNYSLMEELIACKKAV K++ GAPNEIL V
Sbjct: 242 KAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLV 301

Query: 303 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 362
           LDG TGLNMLPQAREFN+VVGITGLILTKLDGSARGGCVVSVV+ELGIPVKF+GVGE +E
Sbjct: 302 LDGNTGLNMLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAVE 361

Query: 363 DLQPFDPEAFVDAIFS 369
           DLQPFDPEAFV+AIFS
Sbjct: 362 DLQPFDPEAFVNAIFS 373

[Close]

BLAST of CmoCh06G011260 vs. TAIR10
Match: AT5G03940.1 (AT5G03940.1 chloroplast signal recognition particle 54 kDa subunit)

HSP 1 Score: 166.4 bits (420), Expect = 3.3e-41
Identity = 110/285 (38.60%), Postives = 157/285 (55.09%), Query Frame = 1


Query: 84  DELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLRDDILSGKLKSGSEIKDALK 143
           +E+L   N+AE  R   ++  ALL +D    +  + V+S+ D  +   +  G +    L 
Sbjct: 95  EEVLTKDNIAEPMR---DIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLV 154

Query: 144 KNVL-ELLKGKGSK-TELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRLKNEGAKILMAA 203
           K V  EL+K  G + +ELQ     P VI++ G+ G GKTT   KLA  LK +G   ++ A
Sbjct: 155 KIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIA 214

Query: 204 GDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQAVKKGKEGGFDIVLCDTSGRL 263
           GD +R AA DQL I  E+ G  +  A  D  K + +  Q +K+ K+   D+V+ DT+GRL
Sbjct: 215 GDVYRPAAIDQLVILGEQVGVPVYTAGTD-VKPADIAKQGLKEAKKNNVDVVIMDTAGRL 274

Query: 264 HTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAREFNDVVGITGLILTK 323
             +  +M+EL    K VKK +   P E+L V+D  TG         FN  +GITG ILTK
Sbjct: 275 QIDKGMMDEL----KDVKKFLN--PTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTK 334

Query: 324 LDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAI 367
           LDG +RGG  +SV +  G P+K VG GE +EDL+PF P+     I
Sbjct: 335 LDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRI 369

[Close]

BLAST of CmoCh06G011260 vs. TAIR10
Match: AT1G15310.1 (AT1G15310.1 signal recognition particle 54 kDa subunit)

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-27
Identity = 91/296 (30.74%), Postives = 148/296 (50.00%), Query Frame = 1


Query: 78  DNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLR-----DDILSGKL 137
           +N+ +IDE +L       +  L+E+  ALL SD    +  K+  +++     DD+ +G  
Sbjct: 18  NNVTIIDEKVL-------NDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHN 77

Query: 138 KSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRLKN 197
           K    I+ A+ K +  +L     K        KP+V+M VG+ G GKTT+  K A+  + 
Sbjct: 78  KR-LIIEQAIFKELCRMLDP--GKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQK 137

Query: 198 EGAKILMAAGDTFRAAASDQLEIWAERCGCEIV--VAEKDNAKASSVLSQAVKKGKEGGF 257
           +G K  +   DTFRA A DQL+  A +          E D  K   +  + V + K+   
Sbjct: 138 KGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVK---IAVEGVDRFKKEKC 197

Query: 258 DIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAREFND 317
           D+++ DTSGR     SL EE+    +A +      P+ ++ V+D + G     QA  F +
Sbjct: 198 DLIIVDTSGRHKQAASLFEEMRQVAEATE------PDLVIFVMDSSIGQAAFEQAEAFKE 257

Query: 318 VVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAI 367
            V +  +I+TK+DG A+GG  +S V     PV F+G GE +++ + FD + FV  +
Sbjct: 258 TVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294

[Close]

BLAST of CmoCh06G011260 vs. TAIR10
Match: AT4G30600.1 (AT4G30600.1 signal recognition particle receptor alpha subunit family protein)

HSP 1 Score: 116.3 bits (290), Expect = 4.0e-26
Identity = 94/299 (31.44%), Postives = 150/299 (50.17%), Query Frame = 1


Query: 91  NLAETDR--VLDELEEALLVSDFGPRITIKIVESLRDDILSGKLKS----GSEIKDALKK 150
           NL  TD    L  L+E L+  +    I  K+ ES+   +   KL S     S ++ A++ 
Sbjct: 342 NLERTDLGPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLSSFTRISSTVQAAMED 401

Query: 151 NVLELLKGKGSKTELQ-----LGFRKPAVIMIVGVNGGGKTTSLGKLAFRLKNEGAKILM 210
            ++ +L  + S   L+        RKP V++ VGVNG GK+T+L K+A+ L+     ++M
Sbjct: 402 ALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMM 461

Query: 211 AAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLS-QAVKKGKEGGFDIVLCDTS 270
           AA DTFR+ A +QL   A R   +I + EK   K  +V++ +A+++    G D+VL DT+
Sbjct: 462 AACDTFRSGAVEQLRTHARR--LQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTA 521

Query: 271 GRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAREFNDVVG----- 330
           GR+  N  LM  L       K +    P+ +L V +   G + + Q  +FN  +      
Sbjct: 522 GRMQDNEPLMRAL------SKLINLNQPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSTS 581

Query: 331 -----ITGLILTKLDG-SARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAI 367
                I G++LTK D    + G  +S+V   G PV FVG G+   DL+  + +A V  +
Sbjct: 582 GNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKAIVKTL 632

[Close]

BLAST of CmoCh06G011260 vs. TAIR10
Match: AT1G48900.1 (AT1G48900.1 Signal recognition particle, SRP54 subunit protein)

HSP 1 Score: 113.6 bits (283), Expect = 2.6e-25
Identity = 87/292 (29.79%), Postives = 142/292 (48.63%), Query Frame = 1


Query: 79  NLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLRDDILSGKLKSGSEI 138
           N+ +IDE  L       +  L+E+  ALL SD    +  ++  +++  +    L +G   
Sbjct: 19  NVTIIDEKAL-------NECLNEITRALLQSDVSFPLVKEMQSNIKKIVNLEDLAAGHNK 78

Query: 139 KDALKKNVL-ELLKGKG-SKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRLKNEGAK 198
           +  +++ +  EL K     K        K +V+M VG+ G GKTT+  K A+  + +G K
Sbjct: 79  RRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTKYAYYHQKKGYK 138

Query: 199 ILMAAGDTFRAAASDQLEIWAERCGCEIV--VAEKDNAKASSVLSQAVKKGKEGGFDIVL 258
             +   DTFRA A DQL+  A +          E D  K   +  + V   K+   D+++
Sbjct: 139 PALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVK---IAVEGVDTFKKENCDLII 198

Query: 259 CDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAREFNDVVGI 318
            DTSGR     SL EE+    +A K      P+ ++ V+D + G     QA+ F   V +
Sbjct: 199 VDTSGRHKQEASLFEEMRQVAEATK------PDLVIFVMDSSIGQAAFDQAQAFKQSVAV 258

Query: 319 TGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAI 367
             +I+TK+DG A+GG  +S V     PV F+G GE +++ + FD + FV  +
Sbjct: 259 GAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294

[Close]

BLAST of CmoCh06G011260 vs. NCBI nr
Match: gi|449432179|ref|XP_004133877.1| (PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 669.5 bits (1726), Expect = 3.4e-189
Identity = 348/368 (94.57%), Postives = 358/368 (97.28%), Query Frame = 1


Query: 1   MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60
           MAAASLS LSFLSNPSPRSL VPSLR T+P R+    GSRFRCSAGQTGFFTRLGRLLKE
Sbjct: 1   MAAASLSQLSFLSNPSPRSLFVPSLRPTTPFRRIHGDGSRFRCSAGQTGFFTRLGRLLKE 60

Query: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120
           KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV
Sbjct: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120

Query: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180
           +SLRDDIL+GKLKSGSEIK+ALKKNVLELLKGKGSKT+LQLGFRKPAVIMIVGVNGGGKT
Sbjct: 121 DSLRDDILAGKLKSGSEIKEALKKNVLELLKGKGSKTDLQLGFRKPAVIMIVGVNGGGKT 180

Query: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQ 240
           TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWA+R GCEIVVAEK+NAKASSVLSQ
Sbjct: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWADRTGCEIVVAEKENAKASSVLSQ 240

Query: 241 AVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLN 300
           AVK+GKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAV KV+PGAPNEILQVLDGTTGLN
Sbjct: 241 AVKRGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVAKVIPGAPNEILQVLDGTTGLN 300

Query: 301 MLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPE 360
           MLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPE
Sbjct: 301 MLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPE 360

Query: 361 AFVDAIFS 369
           AFVDAIFS
Sbjct: 361 AFVDAIFS 368

[Close]

BLAST of CmoCh06G011260 vs. NCBI nr
Match: gi|659075323|ref|XP_008438084.1| (PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 666.0 bits (1717), Expect = 3.8e-188
Identity = 345/368 (93.75%), Postives = 358/368 (97.28%), Query Frame = 1


Query: 1   MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60
           MAAASLS LSFLSNPSPRSLIVPSLR T+P R+    GSRFRCSAGQTGFFTRLGRLLKE
Sbjct: 49  MAAASLSQLSFLSNPSPRSLIVPSLRPTTPFRRIHGDGSRFRCSAGQTGFFTRLGRLLKE 108

Query: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120
           KAKSDVEK+FSGFSKTRDNLAVIDELLLYWNLAETDRVL+ELEEALLVSDFGPRITIKIV
Sbjct: 109 KAKSDVEKIFSGFSKTRDNLAVIDELLLYWNLAETDRVLEELEEALLVSDFGPRITIKIV 168

Query: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180
           +SLRDDIL+GKLKSGSEIK+ALKKNVLELLKGKGSK +LQLGFRKPAVIMIVGVNGGGKT
Sbjct: 169 DSLRDDILAGKLKSGSEIKEALKKNVLELLKGKGSKNDLQLGFRKPAVIMIVGVNGGGKT 228

Query: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQ 240
           TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWA+R GCEIVVAE++NAKASSVLSQ
Sbjct: 229 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWADRTGCEIVVAERENAKASSVLSQ 288

Query: 241 AVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLN 300
           AVK+GKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAV KV+PGAPNEILQVLDGTTGLN
Sbjct: 289 AVKRGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVAKVIPGAPNEILQVLDGTTGLN 348

Query: 301 MLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPE 360
           MLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPE
Sbjct: 349 MLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPE 408

Query: 361 AFVDAIFS 369
           AFVDAIFS
Sbjct: 409 AFVDAIFS 416

[Close]

BLAST of CmoCh06G011260 vs. NCBI nr
Match: gi|590722471|ref|XP_007051903.1| (Signal recognition particle receptor protein isoform 1 [Theobroma cacao])

HSP 1 Score: 598.6 bits (1542), Expect = 7.4e-168
Identity = 313/361 (86.70%), Postives = 332/361 (91.97%), Query Frame = 1


Query: 7   SHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKEKAKSDV 66
           + LS +S PSP    +P  R  +PS   R   SRF+C A QTGFFTRLGRL+KEKAKSDV
Sbjct: 85  TQLSLISKPSPLFSNLPRTRF-NPSTTARPTASRFKCLASQTGFFTRLGRLIKEKAKSDV 144

Query: 67  EKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLRDD 126
           EK+FSGFSKTRDNLAVIDELLLYWNLA+TDRVLDELEEALLVSDFGPRITIKIVESLR+D
Sbjct: 145 EKIFSGFSKTRDNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPRITIKIVESLRED 204

Query: 127 ILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKL 186
           ILSGKLKSGSEIKDALKK VL+LL  KGSKTEL+LGFRKPAVIMIVGVNGGGKTTSLGKL
Sbjct: 205 ILSGKLKSGSEIKDALKKCVLDLLTKKGSKTELRLGFRKPAVIMIVGVNGGGKTTSLGKL 264

Query: 187 AFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQAVKKGK 246
           A+RLKNEGAKILMAAGDTFRAAASDQLEIWAER GCEIVVAEK+NAKASSVLSQAVK+GK
Sbjct: 265 AYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEKENAKASSVLSQAVKRGK 324

Query: 247 EGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAR 306
           E GFDIVLCDTSGRLHTN+SLMEELIACKKAV KV+PGAPNEIL VLDG TGLNMLPQAR
Sbjct: 325 EKGFDIVLCDTSGRLHTNFSLMEELIACKKAVGKVIPGAPNEILLVLDGNTGLNMLPQAR 384

Query: 307 EFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAI 366
           EFN+VVGITG ILTKLDGSARGGCVVSVVDELGIPVKF+GVGEGLEDLQPFD EAFV+AI
Sbjct: 385 EFNEVVGITGFILTKLDGSARGGCVVSVVDELGIPVKFLGVGEGLEDLQPFDAEAFVNAI 444

Query: 367 F 368
           F
Sbjct: 445 F 444

[Close]

BLAST of CmoCh06G011260 vs. NCBI nr
Match: gi|590722475|ref|XP_007051904.1| (Signal recognition particle receptor protein, chloroplast (FTSY) isoform 2 [Theobroma cacao])

HSP 1 Score: 598.6 bits (1542), Expect = 7.4e-168
Identity = 313/361 (86.70%), Postives = 332/361 (91.97%), Query Frame = 1


Query: 7   SHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKEKAKSDV 66
           + LS +S PSP    +P  R  +PS   R   SRF+C A QTGFFTRLGRL+KEKAKSDV
Sbjct: 5   TQLSLISKPSPLFSNLPRTRF-NPSTTARPTASRFKCLASQTGFFTRLGRLIKEKAKSDV 64

Query: 67  EKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLRDD 126
           EK+FSGFSKTRDNLAVIDELLLYWNLA+TDRVLDELEEALLVSDFGPRITIKIVESLR+D
Sbjct: 65  EKIFSGFSKTRDNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPRITIKIVESLRED 124

Query: 127 ILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKL 186
           ILSGKLKSGSEIKDALKK VL+LL  KGSKTEL+LGFRKPAVIMIVGVNGGGKTTSLGKL
Sbjct: 125 ILSGKLKSGSEIKDALKKCVLDLLTKKGSKTELRLGFRKPAVIMIVGVNGGGKTTSLGKL 184

Query: 187 AFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQAVKKGK 246
           A+RLKNEGAKILMAAGDTFRAAASDQLEIWAER GCEIVVAEK+NAKASSVLSQAVK+GK
Sbjct: 185 AYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEKENAKASSVLSQAVKRGK 244

Query: 247 EGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAR 306
           E GFDIVLCDTSGRLHTN+SLMEELIACKKAV KV+PGAPNEIL VLDG TGLNMLPQAR
Sbjct: 245 EKGFDIVLCDTSGRLHTNFSLMEELIACKKAVGKVIPGAPNEILLVLDGNTGLNMLPQAR 304

Query: 307 EFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAI 366
           EFN+VVGITG ILTKLDGSARGGCVVSVVDELGIPVKF+GVGEGLEDLQPFD EAFV+AI
Sbjct: 305 EFNEVVGITGFILTKLDGSARGGCVVSVVDELGIPVKFLGVGEGLEDLQPFDAEAFVNAI 364

Query: 367 F 368
           F
Sbjct: 365 F 364

[Close]

BLAST of CmoCh06G011260 vs. NCBI nr
Match: gi|951037128|ref|XP_014516821.1| (PREDICTED: cell division protein FtsY homolog, chloroplastic [Vigna radiata var. radiata])

HSP 1 Score: 593.6 bits (1529), Expect = 2.4e-166
Identity = 309/366 (84.43%), Postives = 337/366 (92.08%), Query Frame = 1


Query: 3   AASLSHLSFLSNPSPRS-LIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKEK 62
           ++SL+  S +S PS  S  I+ ++   + +   R G +RFRCSAGQTGFFT+LGRL+KEK
Sbjct: 5   SSSLARFSVISQPSSNSQYILFNVAPRTGTPNFRNGSARFRCSAGQTGFFTKLGRLIKEK 64

Query: 63  AKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVE 122
           AKSDVEKVFSGFSKTR+NLAVIDELLLYWNLA+TDRVLDELEEALLVSDFGPRITIKIVE
Sbjct: 65  AKSDVEKVFSGFSKTRNNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPRITIKIVE 124

Query: 123 SLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTT 182
           +LR+DI SGKLKSG+EIK+ALK+NVLELL  KGSKTELQLGFRKPAVIMIVGVNGGGKTT
Sbjct: 125 NLREDIFSGKLKSGNEIKEALKRNVLELLTSKGSKTELQLGFRKPAVIMIVGVNGGGKTT 184

Query: 183 SLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSVLSQA 242
           SLGKLA+RLKNEGAKILMAAGDTFRAAASDQLEIWAER GCEIVVAE   AKASSVLSQA
Sbjct: 185 SLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAESQKAKASSVLSQA 244

Query: 243 VKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNM 302
           VKKGKE GFDIVLCDTSGRLHTNYSLMEELI+CKK+V KV+PGAPNE+L VLDGTTGLNM
Sbjct: 245 VKKGKELGFDIVLCDTSGRLHTNYSLMEELISCKKSVAKVIPGAPNEVLLVLDGTTGLNM 304

Query: 303 LPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEA 362
           LPQAREFNDVVG+TGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEG+EDLQPFD +A
Sbjct: 305 LPQAREFNDVVGVTGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDADA 364

Query: 363 FVDAIF 368
           FV+AIF
Sbjct: 365 FVNAIF 370

The following BLAST results are available for this feature:

BLAST of CmoCh06G011260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CFTSY_ARATH	5.2e-161	81.57	Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis thaliana GN=CPF...	[more]
FTSY_AQUAE	1.1e-70	44.38	Signal recognition particle receptor FtsY OS=Aquifex aeolicus (strain VF5) GN=ft...	[more]
FTSY_BACSU	6.1e-61	38.32	Signal recognition particle receptor FtsY OS=Bacillus subtilis (strain 168) GN=f...	[more]
FTSY_NEIMA	5.1e-60	42.91	Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup A ...	[more]
FTSY_NEIMB	5.1e-60	42.91	Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup B ...	[more]

BLAST of CmoCh06G011260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8Y8_CUCSA	2.4e-189	94.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122650 PE=4 SV=1	[more]
A0A061DTJ5_THECC	5.2e-168	86.70	Signal recognition particle receptor protein isoform 1 OS=Theobroma cacao GN=TCM...	[more]
A0A061DVG5_THECC	5.2e-168	86.70	Signal recognition particle receptor protein, chloroplast (FTSY) isoform 2 OS=Th...	[more]
A0A151UCJ2_CAJCA	1.7e-166	84.43	Cell division protein ftsY isogeny OS=Cajanus cajan GN=KK1_021300 PE=4 SV=1	[more]
V7ANV4_PHAVU	2.8e-166	83.61	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G093600g PE=4 SV=1	[more]

BLAST of CmoCh06G011260 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45770.2	3.6e-160	80.05	signal recognition particle receptor protein, chloroplast (FTSY)	[more]
AT5G03940.1	3.3e-41	38.60	chloroplast signal recognition particle 54 kDa subunit	[more]
AT1G15310.1	2.1e-27	30.74	signal recognition particle 54 kDa subunit	[more]
AT4G30600.1	4.0e-26	31.44	signal recognition particle receptor alpha subunit family protein	[more]
AT1G48900.1	2.6e-25	29.79	Signal recognition particle, SRP54 subunit protein	[more]

BLAST of CmoCh06G011260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432179\|ref\|XP_004133877.1\|	3.4e-189	94.57	PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Cucumis...	[more]
gi\|659075323\|ref\|XP_008438084.1\|	3.8e-188	93.75	PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Cucumis...	[more]
gi\|590722471\|ref\|XP_007051903.1\|	7.4e-168	86.70	Signal recognition particle receptor protein isoform 1 [Theobroma cacao]	[more]
gi\|590722475\|ref\|XP_007051904.1\|	7.4e-168	86.70	Signal recognition particle receptor protein, chloroplast (FTSY) isoform 2 [Theo...	[more]
gi\|951037128\|ref\|XP_014516821.1\|	2.4e-166	84.43	PREDICTED: cell division protein FtsY homolog, chloroplastic [Vigna radiata var....	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000897	SRP54_GTPase_dom
IPR003593	AAA+_ATPase
IPR004390	SR_rcpt_FtsY
IPR013822	Signal_recog_particl_SRP54_hlx
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006614	SRP-dependent cotranslational protein targeting to membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G011260.1	CmoCh06G011260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PFAM	PF00448	SRP54	coord: 166..367 score: 1.0
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	SMART	SM00962	SRP54_3	coord: 166..368 score: 1.4E
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PROSITE	PS00300	SRP54	coord: 341..354 scor
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 165..338 score: 0.
IPR004390	Signal-recognition particle receptor FtsY	TIGRFAMs	TIGR00064	TIGR00064	coord: 95..367 score: 1.5
IPR013822	Signal recognition particle, SRP54 subunit, helical bundle	PFAM	PF02881	SRP54_N	coord: 96..144 score: 4.
IPR013822	Signal recognition particle, SRP54 subunit, helical bundle	SMART	SM00963	SRP54_N_2	coord: 69..150 score: 2.
IPR013822	Signal recognition particle, SRP54 subunit, helical bundle	unknown	SSF47364	Domain of the SRP/SRP receptor G-proteins	coord: 66..143 score: 6.28
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 178..367 score: 2.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 163..367 score: 9.1
None	No IPR available	GENE3D	G3DSA:1.20.120.140		coord: 96..177 score: 2.0
None	No IPR available	PANTHER	PTHR11564	GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS	coord: 59..367 score: 2.7E
None	No IPR available	PANTHER	PTHR11564:SF15	CELL DIVISION PROTEIN FTSY HOMOLOG, CHLOROPLASTIC	coord: 59..367 score: 2.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G011260	Cucsa.258140	Cucumber (Gy14) v1	cgycmoB0718
CmoCh06G011260	CmaCh14G020170	Cucurbita maxima (Rimu)	cmacmoB271
CmoCh06G011260	CmaCh06G010990	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G011260	Cla021256	Watermelon (97103) v1	cmowmB793
CmoCh06G011260	Csa3G122650	Cucumber (Chinese Long) v2	cmocuB806
CmoCh06G011260	MELO3C006136	Melon (DHL92) v3.5.1	cmomeB755
CmoCh06G011260	ClCG05G001760	Watermelon (Charleston Gray)	cmowcgB743
CmoCh06G011260	CSPI03G09030	Wild cucumber (PI 183967)	cmocpiB814
CmoCh06G011260	Lsi05G020150	Bottle gourd (USVL1VR-Ls)	cmolsiB757
CmoCh06G011260	Cp4.1LG03g16870	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G011260	Cp4.1LG08g01610	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G011260	MELO3C006136.2	Melon (DHL92) v3.6.1	cmomedB857
CmoCh06G011260	CsaV3_3G009150	Cucumber (Chinese Long) v3	cmocucB0953
CmoCh06G011260	Cla97C05G082190	Watermelon (97103) v2	cmowmbB833
CmoCh06G011260	Bhi01G000282	Wax gourd	cmowgoB1008
CmoCh06G011260	CsGy3G009100	Cucumber (Gy14) v2	cgybcmoB401
CmoCh06G011260	Carg24953	Silver-seed gourd	carcmoB0892
CmoCh06G011260	Carg14797	Silver-seed gourd	carcmoB0852

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh06G011260	CmoCh14G020770	Cucurbita moschata (Rifu)	cmocmoB224

The following block(s) are covering this gene:

None