Carg24953 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24953
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Signal-recognition particle receptor FtsY
Location	Cucurbita_argyrosperma_scaffold_290 : 145986 .. 149754 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTATCCATTTGGCTCTGAAACATTCCGTTCTCGGAGCTGTAACAAAAATGGCCGCGGCCTCACTCTCTCATCTCTCCTTTCTCTCAAACCCTTCACCTCGAAGCTTGATCGTTCCATCTCTCCGGCTGACTTCTCCTTCCAGGAAAGGCCGTGTCGGTGGTTCTCGATTCAGATGCTCCGCTGGTCAGACGGGATTCTTCACTCGGCTTGGCAGGCTGCTTAAGGAGAAGGCCAAAAGCGATGTCGAGAAGGTCTTCTCGGGCTTCTCAAAGACTCGAGACAATCTTGCTGTTATTGATGAGCTTCTTCTTTACTGGAACCTCGCGGAGACCGATAGAGTTCTCGATGAACTCGAAGAGGTCAGTATTCTGTTCCTGCTCTATTTTCTCTCTTTTGTTTTATGTTCGTCTCAAGGAAGTATTGCCTACTTAGGAAACTGTTCTGTTCAGGAATTCTTGGATTTTTTGAACTCGAATTTGTCAAATCTAATCCAATCCACTGTTCTGAATGTGGATTCCTCGGAGGTGTAATTCGATTTTGGTTTACATATGTCTCTTATCTTACAACTTCCCTCAGGTCTTTATTTCCGAGAATGAGCTTAAATCCAACCTTCTTTCAGACCTGAATTTTTGTATGGCTTGAATGTTAGTAATTGAGCTATTTTCGTATTATTGATATAAGTGGTCCTTTTAATACTGGAGTCTTTCGGAAAAATCGTTTGTAAGCCGGATGAAATTCCATGGTTAATCGTAGTGTTGATAATCTTGTAGGCATTATTGGTGTCTGATTTCGGGCCGAGGATCACCATTAAGATCGTGGAGAGCTTGCGTGACGACATATTGTCTGGGAAGCTAAAATCGGGTAGTGAAATAAAGGTAATTAGTTCACGAATTGTTTCATTACTCTGTGTTGAAAGAAAGAAGGGCTTACTACACGGAAATGAATTAATAATTATTGCGTTAAACGTTAAATGAAGCTCTAGCGGCACAGTGAGCAATTTACCTCTCTTTCTGCTTGGAATTGGAATTCGTTTCATTTGGAGAAATTTCTATTATGAAAATTTTTATACTCATTTAAGTTTGTCGATGAAAAATTTTATGTACTGCTCTGAGTTTTGAATCATGGAATTTGGATTTAATTTTTGAAGTGGTAGTTTGGTCGATGATCGCCAATTTGATGAAAGAAATGCTTTAGATTCCAAGTTTGGTTGTCAATTCTATATTTTTATATCCATATAGTTTGTAACGCTTGATTGAACTTGTAATACACTGATCAAAACGATCCCAGGATGCCTTAAAGAAGAATGTGTTGGAGTTGTTGAAAGGGAAGGGGAGCAAAACCGAACTTCAACTTGGATTCCGGTCTACTTTCTTTTTGGTTTCTAGTTTGTGCAATCTATCTAACTAAGCGCAATATCTCAAGCACTAACTCCGATTCTGCTTTTATCATGTCATCAGTAAACCGGCCGTGATTATGATAGTTGGTGTTAACGGAGGTGGAAAGACAACATCTCTTGGTAAGACCTAGCATTAACATGGTATGAGTATTCTATTGAGTTTAAACCTCATTTCTTGTGATAATTTCTTGGCAGAAGTTCTTACGTAGTTTTGAGGATATTTACTTGGATTTTCATGCGGCCTGACCTCGTAAAAAAAAAAAATATATATATATATGGCTCGAACATAATATATTTCCTTTTAAAAGCATGTTAAATATACTTTCCCATTTATTTGTTGCAATTTCATTATTACTACTCCAGTAAGACAAGTTTAGGAAATTAAAATGACCTCATATTGCATAAGGTTAAGCTATCTACTTCTCTGTCTATTTGCTAAATTGGGATATATTTATTTGCGGTGCTATTACTCAAATTACCCAGTAATATCTTTTCAACTCCATGTTGCAGGAAAGCTGGCTTTTAGACTAAAAAACGAAGGAGCCAAGGTTAGATGATCTTCTTACCCTTCTAAGTGGAAGTTACTTTCTTATTTAAAAAAGTAACTCGATGGAAATATAGTAATTTACATTTTTGTGTGCCAGATATTGATGGCAGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGCTGGAAATCTGGGCAGAGAGATGTGGATGTGAGATTGTTGTTGCTGAAAAGGACAATGCCAAGGCGTCATCAGGTATGCAGTAGTTATAGTGCTCTGTTTCTTTTTCTTGACATTGTAATGTTTGAGGAAGTTTGTATCATATACTGTGGATGCTAACTTATCCTCTTGAAGTGTTTCCCTGATAGTTCTATCACAGGCTGTAAAGAAAGGAAAAGAAGGTGGTTTTGACATTGTTTTGTGTGATACATCTGGACGTAAGTATATGTAGTGTATCGGCTTACTGTTAGTATTCTTTCTTGTGTCTTCTTAATAGATGAAAATCTTGGTTTTTTTTTTTTTTTTCATAGGTCTGCATACAAATTATAGTTTGATGGAAGAGTTAATAGCATGTAAGAAAGCTGTGAAAAAAGTTATGCCCGGGGCACCTAATGTAAGCATTACTATTTTTTCGTTTTACCTTGTTGACTTGTTCTATTTCAAAAGCCGGATGTGTAGGCATTTACACTTCTAGACTGCGTAAGCCATTCAATTTTCCTTCAACATTATCATGCGTGACTACCCAGTATTAAGTGAAAGTCTGAAGTTTTAACCTAGTAATAAAGACATATTTTTGTATAGCGTAAAGGCTCTTGTCAAGACTTCAATGAGTGCAACTGCAAAGCTTTTTTCTTGTATTTTCGGTGTAGGGATTTGCACTTTACACTTGCATAAGCATTTAATTTATCTTCGACGTTATTATGCACGGGACTGTGGGGTGAGTGGCACCTTTTCTTTGAGATTTCTTCTCTTTTCCTCCAATGCTTTCGGCTGTTAGCTGAGGTTAAAATCAAACTTGATTTCTGTGTTAGGAAAATAATTTATTTAAATATGACACTATTAGTTGTAAGGCAGATGATACTCAGATCACTGAAAATTCCATTTTTCTACTTTGTTATTATTACCTCATTCAGGCAAACACTGCCTCCCATGAAATTTATGGTTCAAGCAGATATGAAGAATTTTATAAAAGTTGGATATCTGGTCATTAAAGTGAAATTCTACCTAGTATCATGTACTTATTAAGAGTTTCATTACAATTGCAGGAGATCCTGCAGGTATTGGATGGGACAACTGGTTTGAATATGCTACCACAAGCAAGGGAGTTCAATGATGTAACTTTTACTATCCTTTTCCTTCTAAATGAATATATCATTTCTTGCCATTTTGCAAGTTTTCGTTCACGATTTCCCCAAAAGTAAAATATAGCATCATCTGCTGAGTACAATATATGCATTTGGATTATTATATTTATGTGTCTTTTACCTTGGGGCAAGTATTCTTGAAACATAATAGCTAATGGAGTTCTTAGCATGTTGCAATCCTGCTTGTAGTTACCAAGAAATTTCAATTGACAAGCTTGTTGGCTTCTGTAACAGGTAGTTGGAATTACTGGTTTAATTTTGACAAAACTTGATGGTTCTGCAAGAGGTGGTTGTGTGGTATGCCTTAAAATTCTGAGATGAACAACTTCCTGAAATGACATGACCGCCAACTACTCTCTGATGATATAATCCTTCTTTCTCAGGTCAGTGTGGTCGACGAGCTTGGTATCCCTGTAAAGTTTGTTGGCGTTGGTGAAGGGTTAGAAGATCTTCAACCTTTTGATCCAGAGGCCTTCGTTGATGCCATATTTTCATGA

mRNA sequence

GTTTATCCATTTGGCTCTGAAACATTCCGTTCTCGGAGCTGTAACAAAAATGGCCGCGGCCTCACTCTCTCATCTCTCCTTTCTCTCAAACCCTTCACCTCGAAGCTTGATCGTTCCATCTCTCCGGCTGACTTCTCCTTCCAGGAAAGGCCGTGTCGGTGGTTCTCGATTCAGATGCTCCGCTGGTCAGACGGGATTCTTCACTCGGCTTGGCAGGCTGCTTAAGGAGAAGGCCAAAAGCGATGTCGAGAAGGTCTTCTCGGGCTTCTCAAAGACTCGAGACAATCTTGCTGTTATTGATGAGCTTCTTCTTTACTGGAACCTCGCGGAGACCGATAGAGTTCTCGATGAACTCGAAGAGGCATTATTGGTGTCTGATTTCGGGCCGAGGATCACCATTAAGATCGTGGAGAGCTTGCGTGACGACATATTGTCTGGGAAGCTAAAATCGGGTAGTGAAATAAAGGATGCCTTAAAGAAGAATGTGTTGGAGTTGTTGAAAGGGAAGGGGAGCAAAACCGAACTTCAACTTGGATTCCGTAAACCGGCCGTGATTATGATAGTTGGTGTTAACGGAGGTGGAAAGACAACATCTCTTGGAAAGCTGGCTTTTAGACTAAAAAACGAAGGAGCCAAGATATTGATGGCAGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGCTGGAAATCTGGGCAGAGAGATGTGGATGTGAGATTGTTGTTGCTGAAAAGGACAATGCCAAGGCGTCATCAGGTATGCAGTATGTTTCCCTGATAGTTCTATCACAGGCTGTAAAGAAAGGAAAAGAAGGTGGTTTTGACATTGTTTTGTGTGATACATCTGGACGTCTGCATACAAATTATAGTTTGATGGAAGAGTTAATAGCATGTAAGAAAGCTGTGAAAAAAGTTATGCCCGGGGCACCTAATGAGATCCTGCAGGTATTGGATGGGACAACTGGTTTGAATATGCTACCACAAGCAAGGGAGTTCAATGATGTAGTTGGAATTACTGGTTTAATTTTGACAAAACTTGATGGTTCTGCAAGAGGTGGTTGTGTGGTCAGTGTGGTCGACGAGCTTGGTATCCCTGTAAAGTTTGTTGGCGTTGGTGAAGGGTTAGAAGATCTTCAACCTTTTGATCCAGAGGCCTTCGTTGATGCCATATTTTCATGA

Coding sequence (CDS)

ATGGCCGCGGCCTCACTCTCTCATCTCTCCTTTCTCTCAAACCCTTCACCTCGAAGCTTGATCGTTCCATCTCTCCGGCTGACTTCTCCTTCCAGGAAAGGCCGTGTCGGTGGTTCTCGATTCAGATGCTCCGCTGGTCAGACGGGATTCTTCACTCGGCTTGGCAGGCTGCTTAAGGAGAAGGCCAAAAGCGATGTCGAGAAGGTCTTCTCGGGCTTCTCAAAGACTCGAGACAATCTTGCTGTTATTGATGAGCTTCTTCTTTACTGGAACCTCGCGGAGACCGATAGAGTTCTCGATGAACTCGAAGAGGCATTATTGGTGTCTGATTTCGGGCCGAGGATCACCATTAAGATCGTGGAGAGCTTGCGTGACGACATATTGTCTGGGAAGCTAAAATCGGGTAGTGAAATAAAGGATGCCTTAAAGAAGAATGTGTTGGAGTTGTTGAAAGGGAAGGGGAGCAAAACCGAACTTCAACTTGGATTCCGTAAACCGGCCGTGATTATGATAGTTGGTGTTAACGGAGGTGGAAAGACAACATCTCTTGGAAAGCTGGCTTTTAGACTAAAAAACGAAGGAGCCAAGATATTGATGGCAGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGCTGGAAATCTGGGCAGAGAGATGTGGATGTGAGATTGTTGTTGCTGAAAAGGACAATGCCAAGGCGTCATCAGGTATGCAGTATGTTTCCCTGATAGTTCTATCACAGGCTGTAAAGAAAGGAAAAGAAGGTGGTTTTGACATTGTTTTGTGTGATACATCTGGACGTCTGCATACAAATTATAGTTTGATGGAAGAGTTAATAGCATGTAAGAAAGCTGTGAAAAAAGTTATGCCCGGGGCACCTAATGAGATCCTGCAGGTATTGGATGGGACAACTGGTTTGAATATGCTACCACAAGCAAGGGAGTTCAATGATGTAGTTGGAATTACTGGTTTAATTTTGACAAAACTTGATGGTTCTGCAAGAGGTGGTTGTGTGGTCAGTGTGGTCGACGAGCTTGGTATCCCTGTAAAGTTTGTTGGCGTTGGTGAAGGGTTAGAAGATCTTCAACCTTTTGATCCAGAGGCCTTCGTTGATGCCATATTTTCATGA

Protein sequence

MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKEKAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQYVSLIVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAIFS

Homology

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BLAST of Carg24953 vs. NCBI nr
Match: XP_022934037.1 (cell division protein FtsY homolog, chloroplastic [Cucurbita moschata])

HSP 1 Score: 702.2 bits (1811), Expect = 9.5e-199
Identity = 368/376 (97.87%), Postives = 368/376 (97.87%), Query Frame = 0


Query: 1   MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60
           MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE
Sbjct: 1   MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60

Query: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120
           KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV
Sbjct: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120

Query: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180
           ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT
Sbjct: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180

Query: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQY 240
           TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASS    
Sbjct: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASS---- 240

Query: 241 VSLIVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV 300
               VLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV
Sbjct: 241 ----VLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV 300

Query: 301 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 360
           LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE
Sbjct: 301 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 360

Query: 361 DLQPFDPEAFVDAIFS 377
           DLQPFDPEAFVDAIFS
Sbjct: 361 DLQPFDPEAFVDAIFS 368

[Close]

BLAST of Carg24953 vs. NCBI nr
Match: XP_023540627.1 (cell division protein FtsY homolog, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 698.7 bits (1802), Expect = 1.0e-197
Identity = 366/376 (97.34%), Postives = 367/376 (97.61%), Query Frame = 0


Query: 1   MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60
           MAAASLS LSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE
Sbjct: 1   MAAASLSQLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60

Query: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120
           KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV
Sbjct: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120

Query: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180
           ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT
Sbjct: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180

Query: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQY 240
           TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIV+AEKDNAKASS    
Sbjct: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVIAEKDNAKASS---- 240

Query: 241 VSLIVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV 300
               VLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV
Sbjct: 241 ----VLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV 300

Query: 301 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 360
           LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE
Sbjct: 301 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 360

Query: 361 DLQPFDPEAFVDAIFS 377
           DLQPFDPEAFVDAIFS
Sbjct: 361 DLQPFDPEAFVDAIFS 368

[Close]

BLAST of Carg24953 vs. NCBI nr
Match: XP_022975096.1 (cell division protein FtsY homolog, chloroplastic [Cucurbita maxima])

HSP 1 Score: 698.0 bits (1800), Expect = 1.8e-197
Identity = 366/376 (97.34%), Postives = 367/376 (97.61%), Query Frame = 0


Query: 1   MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60
           MAAASLSHLSFLSNPSPRSLIVPSLR+TSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE
Sbjct: 1   MAAASLSHLSFLSNPSPRSLIVPSLRITSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60

Query: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120
           KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV
Sbjct: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120

Query: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180
           ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT
Sbjct: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180

Query: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQY 240
           TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASS    
Sbjct: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASS---- 240

Query: 241 VSLIVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV 300
               VLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV
Sbjct: 241 ----VLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV 300

Query: 301 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 360
           LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVV ELGIPVKFVGVGEGLE
Sbjct: 301 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVYELGIPVKFVGVGEGLE 360

Query: 361 DLQPFDPEAFVDAIFS 377
           DLQPFDPEAFVDAIFS
Sbjct: 361 DLQPFDPEAFVDAIFS 368

[Close]

BLAST of Carg24953 vs. NCBI nr
Match: XP_004133877.1 (PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Cucumis sativus] >KGN56541.1 hypothetical protein Csa_3G122650 [Cucumis sativus])

HSP 1 Score: 662.5 bits (1708), Expect = 8.3e-187
Identity = 348/376 (92.55%), Postives = 358/376 (95.21%), Query Frame = 0


Query: 1   MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60
           MAAASLS LSFLSNPSPRSL VPSLR T+P R+    GSRFRCSAGQTGFFTRLGRLLKE
Sbjct: 1   MAAASLSQLSFLSNPSPRSLFVPSLRPTTPFRRIHGDGSRFRCSAGQTGFFTRLGRLLKE 60

Query: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120
           KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV
Sbjct: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120

Query: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180
           +SLRDDIL+GKLKSGSEIK+ALKKNVLELLKGKGSKT+LQLGFRKPAVIMIVGVNGGGKT
Sbjct: 121 DSLRDDILAGKLKSGSEIKEALKKNVLELLKGKGSKTDLQLGFRKPAVIMIVGVNGGGKT 180

Query: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQY 240
           TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWA+R GCEIVVAEK+NAKASS    
Sbjct: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWADRTGCEIVVAEKENAKASS---- 240

Query: 241 VSLIVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV 300
               VLSQAVK+GKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAV KV+PGAPNEILQV
Sbjct: 241 ----VLSQAVKRGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVAKVIPGAPNEILQV 300

Query: 301 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 360
           LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE
Sbjct: 301 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 360

Query: 361 DLQPFDPEAFVDAIFS 377
           DLQPFDPEAFVDAIFS
Sbjct: 361 DLQPFDPEAFVDAIFS 368

[Close]

BLAST of Carg24953 vs. NCBI nr
Match: XP_008438084.1 (PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 659.1 bits (1699), Expect = 9.2e-186
Identity = 345/376 (91.76%), Postives = 358/376 (95.21%), Query Frame = 0


Query: 1   MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60
           MAAASLS LSFLSNPSPRSLIVPSLR T+P R+    GSRFRCSAGQTGFFTRLGRLLKE
Sbjct: 49  MAAASLSQLSFLSNPSPRSLIVPSLRPTTPFRRIHGDGSRFRCSAGQTGFFTRLGRLLKE 108

Query: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120
           KAKSDVEK+FSGFSKTRDNLAVIDELLLYWNLAETDRVL+ELEEALLVSDFGPRITIKIV
Sbjct: 109 KAKSDVEKIFSGFSKTRDNLAVIDELLLYWNLAETDRVLEELEEALLVSDFGPRITIKIV 168

Query: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180
           +SLRDDIL+GKLKSGSEIK+ALKKNVLELLKGKGSK +LQLGFRKPAVIMIVGVNGGGKT
Sbjct: 169 DSLRDDILAGKLKSGSEIKEALKKNVLELLKGKGSKNDLQLGFRKPAVIMIVGVNGGGKT 228

Query: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQY 240
           TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWA+R GCEIVVAE++NAKASS    
Sbjct: 229 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWADRTGCEIVVAERENAKASS---- 288

Query: 241 VSLIVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV 300
               VLSQAVK+GKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAV KV+PGAPNEILQV
Sbjct: 289 ----VLSQAVKRGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVAKVIPGAPNEILQV 348

Query: 301 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 360
           LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE
Sbjct: 349 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 408

Query: 361 DLQPFDPEAFVDAIFS 377
           DLQPFDPEAFVDAIFS
Sbjct: 409 DLQPFDPEAFVDAIFS 416

[Close]

BLAST of Carg24953 vs. TAIR10
Match: AT2G45770.2 (signal recognition particle receptor protein, chloroplast (FTSY))

HSP 1 Score: 554.7 bits (1428), Expect = 4.4e-158
Identity = 301/384 (78.39%), Postives = 332/384 (86.46%), Query Frame = 0


Query: 3   AASLSHLSFLSNP-SPRSLIVPSLRLTSPSRKG--RVGGSRFRCSAGQTGFFTRLGRLLK 62
           A S +HLSFL+   SP S    S R+     +G  R   +RFRCSAG +GFFTRLGRL+K
Sbjct: 2   ATSSAHLSFLAGRISPFS----SERIGLFPLRGEFRPRMTRFRCSAGPSGFFTRLGRLIK 61

Query: 63  EKAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKI 122
           EKAKSDVEKVFSGFSKTR+NLAVIDELLL+WNLAETDRVLDELEEALLVSDFGP+IT++I
Sbjct: 62  EKAKSDVEKVFSGFSKTRENLAVIDELLLFWNLAETDRVLDELEEALLVSDFGPKITVRI 121

Query: 123 VESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGK 182
           VE LR+DI+SGKLKSGSEIKDALK++VLE+L  K SKTELQLGFRKPAVIMIVGVNGGGK
Sbjct: 122 VERLREDIMSGKLKSGSEIKDALKESVLEMLAKKNSKTELQLGFRKPAVIMIVGVNGGGK 181

Query: 183 TTSL-------GKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNA 242
           TTSL       GKLA RLKNEG K+LMAAGDTFRAAASDQLEIWAER GCEIVVAE D A
Sbjct: 182 TTSLDSGFCFSGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGDKA 241

Query: 243 KASSGMQYVSLIVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPG 302
           KA++        VLS+AVK+GKE G+D+VLCDTSGRLHTNYSLMEELIACKKAV K++ G
Sbjct: 242 KAAT--------VLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSG 301

Query: 303 APNEILQVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKF 362
           APNEIL VLDG TGLNMLPQAREFN+VVGITGLILTKLDGSARGGCVVSVV+ELGIPVKF
Sbjct: 302 APNEILLVLDGNTGLNMLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVEELGIPVKF 361

Query: 363 VGVGEGLEDLQPFDPEAFVDAIFS 377
           +GVGE +EDLQPFDPEAFV+AIFS
Sbjct: 362 IGVGEAVEDLQPFDPEAFVNAIFS 373

[Close]

BLAST of Carg24953 vs. TAIR10
Match: AT5G03940.1 (chloroplast signal recognition particle 54 kDa subunit)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-39
Identity = 110/293 (37.54%), Postives = 156/293 (53.24%), Query Frame = 0


Query: 84  DELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLRDDILSGKLKSGSEIKDALK 143
           +E+L   N+AE  R   ++  ALL +D    +  + V+S+ D  +   +  G +    L 
Sbjct: 95  EEVLTKDNIAEPMR---DIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLV 154

Query: 144 KNVL-ELLKGKGSK-TELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRLKNEGAKILMAA 203
           K V  EL+K  G + +ELQ     P VI++ G+ G GKTT   KLA  LK +G   ++ A
Sbjct: 155 KIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIA 214

Query: 204 GDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQYVSLIVLSQAVKKGKEGGFDIV 263
           GD +R AA DQL I  E+ G  +  A  D   A          +  Q +K+ K+   D+V
Sbjct: 215 GDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPAD---------IAKQGLKEAKKNNVDVV 274

Query: 264 LCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAREFNDVVG 323
           + DT+GRL  +  +M+EL    K VKK +   P E+L V+D  TG         FN  +G
Sbjct: 275 IMDTAGRLQIDKGMMDEL----KDVKKFL--NPTEVLLVVDAMTGQEAAALVTTFNVEIG 334

Query: 324 ITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAI 375
           ITG ILTKLDG +RGG  +SV +  G P+K VG GE +EDL+PF P+     I
Sbjct: 335 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRI 369

[Close]

BLAST of Carg24953 vs. TAIR10
Match: AT1G15310.1 (signal recognition particle 54 kDa subunit)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26
Identity = 91/304 (29.93%), Postives = 148/304 (48.68%), Query Frame = 0


Query: 78  DNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLR-----DDILSGKL 137
           +N+ +IDE +L       +  L+E+  ALL SD    +  K+  +++     DD+ +G  
Sbjct: 18  NNVTIIDEKVL-------NDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHN 77

Query: 138 KSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRLKN 197
           K    I+ A+ K +  +L     K        KP+V+M VG+ G GKTT+  K A+  + 
Sbjct: 78  KR-LIIEQAIFKELCRML--DPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQK 137

Query: 198 EGAKILMAAGDTFRAAASDQLEIWAERCGCEIV--VAEKDNAKASSGMQYVSLIVLSQAV 257
           +G K  +   DTFRA A DQL+  A +          E D  K           +  + V
Sbjct: 138 KGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVK-----------IAVEGV 197

Query: 258 KKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNML 317
            + K+   D+++ DTSGR     SL EE+    +A +      P+ ++ V+D + G    
Sbjct: 198 DRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATE------PDLVIFVMDSSIGQAAF 257

Query: 318 PQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAF 375
            QA  F + V +  +I+TK+DG A+GG  +S V     PV F+G GE +++ + FD + F
Sbjct: 258 EQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 294

[Close]

BLAST of Carg24953 vs. TAIR10
Match: AT1G48900.1 (Signal recognition particle, SRP54 subunit protein)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-24
Identity = 87/300 (29.00%), Postives = 142/300 (47.33%), Query Frame = 0


Query: 79  NLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLRDDILSGKLKSGSEI 138
           N+ +IDE  L       +  L+E+  ALL SD    +  ++  +++  +    L +G   
Sbjct: 19  NVTIIDEKAL-------NECLNEITRALLQSDVSFPLVKEMQSNIKKIVNLEDLAAGHNK 78

Query: 139 KDALKKNVL-ELLKG-KGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRLKNEGAK 198
           +  +++ +  EL K     K        K +V+M VG+ G GKTT+  K A+  + +G K
Sbjct: 79  RRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTKYAYYHQKKGYK 138

Query: 199 ILMAAGDTFRAAASDQLEIWAERCGCEIV--VAEKDNAKASSGMQYVSLIVLSQAVKKGK 258
             +   DTFRA A DQL+  A +          E D  K           +  + V   K
Sbjct: 139 PALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVK-----------IAVEGVDTFK 198

Query: 259 EGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAR 318
           +   D+++ DTSGR     SL EE+    +A K      P+ ++ V+D + G     QA+
Sbjct: 199 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATK------PDLVIFVMDSSIGQAAFDQAQ 258

Query: 319 EFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAFVDAI 375
            F   V +  +I+TK+DG A+GG  +S V     PV F+G GE +++ + FD + FV  +
Sbjct: 259 AFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294

[Close]

BLAST of Carg24953 vs. TAIR10
Match: AT4G30600.1 (signal recognition particle receptor alpha subunit family protein)

HSP 1 Score: 105.9 bits (263), Expect = 5.5e-23
Identity = 91/306 (29.74%), Postives = 145/306 (47.39%), Query Frame = 0


Query: 91  NLAETD--RVLDELEEALLVSDFGPR----ITIKIVESLRDDILSGKLKSGSEIKDALKK 150
           NL  TD    L  L+E L+  +            +  SL    LS   +  S ++ A++ 
Sbjct: 342 NLERTDLGPALKALKERLMTKNVAEEXXXXXXXXVEASLEGKKLSSFTRISSTVQAAMED 401

Query: 151 NVLELLKGKGSKTELQ-----LGFRKPAVIMIVGVNGGGKTTSLGKLAFRLKNEGAKILM 210
            ++ +L  + S   L+        RKP V++ VGVNG GK+T+L K+A+ L+     ++M
Sbjct: 402 ALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMM 461

Query: 211 AAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQYVSLIVLSQAVKKGKEGGFD 270
           AA DTFR+ A +QL   A R   +I + EK       G +    +V  +A+++    G D
Sbjct: 462 AACDTFRSGAVEQLRTHARR--LQIPIFEK-------GYEKDPAVVAKEAIQEATRNGSD 521

Query: 271 IVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNMLPQAREFNDV 330
           +VL DT+GR+  N  LM  L       K +    P+ +L V +   G + + Q  +FN  
Sbjct: 522 VVLVDTAGRMQDNEPLMRAL------SKLINLNQPDLVLFVGEALVGNDAVDQLSKFNQK 581

Query: 331 VG----------ITGLILTKLDG-SARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPE 375
           +           I G++LTK D    + G  +S+V   G PV FVG G+   DL+  + +
Sbjct: 582 LSDLSTSGNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVK 632

[Close]

BLAST of Carg24953 vs. Swiss-Prot
Match: sp|O80842|CFTSY_ARATH (Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPFTSY PE=1 SV=2)

HSP 1 Score: 561.6 bits (1446), Expect = 6.6e-159
Identity = 301/377 (79.84%), Postives = 332/377 (88.06%), Query Frame = 0


Query: 3   AASLSHLSFLSNP-SPRSLIVPSLRLTSPSRKG--RVGGSRFRCSAGQTGFFTRLGRLLK 62
           A S +HLSFL+   SP S    S R+     +G  R   +RFRCSAG +GFFTRLGRL+K
Sbjct: 2   ATSSAHLSFLAGRISPFS----SERIGLFPLRGEFRPRMTRFRCSAGPSGFFTRLGRLIK 61

Query: 63  EKAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKI 122
           EKAKSDVEKVFSGFSKTR+NLAVIDELLL+WNLAETDRVLDELEEALLVSDFGP+IT++I
Sbjct: 62  EKAKSDVEKVFSGFSKTRENLAVIDELLLFWNLAETDRVLDELEEALLVSDFGPKITVRI 121

Query: 123 VESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGK 182
           VE LR+DI+SGKLKSGSEIKDALK++VLE+L  K SKTELQLGFRKPAVIMIVGVNGGGK
Sbjct: 122 VERLREDIMSGKLKSGSEIKDALKESVLEMLAKKNSKTELQLGFRKPAVIMIVGVNGGGK 181

Query: 183 TTSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQ 242
           TTSLGKLA RLKNEG K+LMAAGDTFRAAASDQLEIWAER GCEIVVAE D AKA++   
Sbjct: 182 TTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGDKAKAAT--- 241

Query: 243 YVSLIVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQ 302
                VLS+AVK+GKE G+D+VLCDTSGRLHTNYSLMEELIACKKAV K++ GAPNEIL 
Sbjct: 242 -----VLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILL 301

Query: 303 VLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGL 362
           VLDG TGLNMLPQAREFN+VVGITGLILTKLDGSARGGCVVSVV+ELGIPVKF+GVGE +
Sbjct: 302 VLDGNTGLNMLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAV 361

Query: 363 EDLQPFDPEAFVDAIFS 377
           EDLQPFDPEAFV+AIFS
Sbjct: 362 EDLQPFDPEAFVNAIFS 366

[Close]

BLAST of Carg24953 vs. Swiss-Prot
Match: sp|P51835|FTSY_BACSU (Signal recognition particle receptor FtsY OS=Bacillus subtilis (strain 168) OX=224308 GN=ftsY PE=1 SV=2)

HSP 1 Score: 232.6 bits (592), Expect = 7.0e-60
Identity = 124/329 (37.69%), Postives = 206/329 (62.61%), Query Frame = 0


Query: 50  FFTRLGRLLKEKAKSDVEKVFSGFSKTRDNLA-VIDELLLYWNLAETDRVLDELEEALLV 109
           FF +L   + ++  S  EK   G  KTR++    +++L+  +   + D   +ELEE L+ 
Sbjct: 3   FFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDED-FFEELEEVLIS 62

Query: 110 SDFGPRITIKIVESLRDDILSGKLKSGSEIKDALKKNVLELL-KGKGSKTELQLGFRKPA 169
           +D G    +++++ L+ ++    ++   E++  + + ++E+   G    +EL +   +  
Sbjct: 63  ADVGFTTVMELIDELKKEVKRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLN 122

Query: 170 VIMIVGVNGGGKTTSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVA 229
           VI++VGVNG GKTT++GKLA ++K EG  +++AAGDTFRA A +QLE+W ER G  ++  
Sbjct: 123 VILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFRAGAIEQLEVWGERTGVPVI-- 182

Query: 230 EKDNAKASSGMQYVSLIVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVK 289
                K ++G    +  V+  AV   K    D+++CDT+GRL    +LM+EL   K+ ++
Sbjct: 183 -----KQTAGSDPAA--VIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIE 242

Query: 290 KVMPGAPNEILQVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELG 349
           + +P AP+E+L  LD TTG N + QA+EF+    +TG+ LTKLDG+A+GG V+++ +EL 
Sbjct: 243 REVPEAPHEVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELH 302

Query: 350 IPVKFVGVGEGLEDLQPFDPEAFVDAIFS 377
           IPVK VG+GE ++DLQ FDPE++V  +FS
Sbjct: 303 IPVKLVGLGEKVDDLQEFDPESYVYGLFS 321

[Close]

BLAST of Carg24953 vs. Swiss-Prot
Match: sp|P57010|FTSY_NEIMA (Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) OX=122587 GN=ftsY PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-58
Identity = 129/304 (42.43%), Postives = 189/304 (62.17%), Query Frame = 0


Query: 72  GFSKTRDNLAVIDELLLYWNLAETDRVL-DELEEALLVSDFGPRITIKIVESLRDDILSG 131
           G +K+RD +A    L   +   + D  L +ELE  L+ SD G   T  +++ +RD +   
Sbjct: 129 GLTKSRDKMA--KSLAGVFGGGQIDEDLYEELETVLITSDMGMEATEYLMKDVRDRVSLK 188

Query: 132 KLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRL 191
            LK G+E++ ALK+ + +L+K    K  +    ++P VIM+ G+NG GKTTS+GKLA   
Sbjct: 189 GLKDGNELRGALKEALYDLIKPL-EKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKYF 248

Query: 192 KNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQYVSLIVLSQAV 251
           + +G  +L+AAGDTFRAAA +QL+ W ER          +N    S     S  V   AV
Sbjct: 249 QAQGKSVLLAAGDTFRAAAREQLQAWGER----------NNVTVISQTTGDSAAVCFDAV 308

Query: 252 KKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNML 311
           +  K  G DIVL DT+GRL T   LMEE+   K+ ++K MP AP+EI+ VLD   G N +
Sbjct: 309 QAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAV 368

Query: 312 PQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAF 371
            Q + F+D +G+TGLI+TKLDG+A+GG + ++  +  +PV+++GVGEG++DL+PFD  AF
Sbjct: 369 NQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAF 419

Query: 372 VDAI 375
           VDA+
Sbjct: 429 VDAL 419

[Close]

BLAST of Carg24953 vs. Swiss-Prot
Match: sp|P57011|FTSY_NEIMB (Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=ftsY PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-58
Identity = 129/304 (42.43%), Postives = 189/304 (62.17%), Query Frame = 0


Query: 72  GFSKTRDNLAVIDELLLYWNLAETDRVL-DELEEALLVSDFGPRITIKIVESLRDDILSG 131
           G +K+RD +A    L   +   + D  L +ELE  L+ SD G   T  +++ +RD +   
Sbjct: 129 GLTKSRDKMA--KSLAGVFGGGQIDEDLYEELETVLITSDMGMEATEYLMKDVRDRVSLK 188

Query: 132 KLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRL 191
            LK G+E++ ALK+ + +L+K    K  +    ++P VIM+ G+NG GKTTS+GKLA   
Sbjct: 189 GLKDGNELRGALKEALYDLIKPL-EKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKYF 248

Query: 192 KNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQYVSLIVLSQAV 251
           + +G  +L+AAGDTFRAAA +QL+ W ER          +N    S     S  V   AV
Sbjct: 249 QAQGKSVLLAAGDTFRAAAREQLQAWGER----------NNVTVISQTTGDSAAVCFDAV 308

Query: 252 KKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNML 311
           +  K  G DIVL DT+GRL T   LMEE+   K+ ++K MP AP+EI+ VLD   G N +
Sbjct: 309 QAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAV 368

Query: 312 PQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAF 371
            Q + F+D +G+TGLI+TKLDG+A+GG + ++  +  +PV+++GVGEG++DL+PFD  AF
Sbjct: 369 NQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAF 419

Query: 372 VDAI 375
           VDA+
Sbjct: 429 VDAL 419

[Close]

BLAST of Carg24953 vs. Swiss-Prot
Match: sp|O30391|FTSY_NEIMC (Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup C OX=135720 GN=ftsY PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 8.5e-58
Identity = 128/304 (42.11%), Postives = 188/304 (61.84%), Query Frame = 0


Query: 72  GFSKTRDNLAVIDELLLYWNLAETDRVL-DELEEALLVSDFGPRITIKIVESLRDDILSG 131
           G +K+RD +A    L   +   + D  L +ELE  L+ SD     T  +++ +RD +   
Sbjct: 129 GLTKSRDKMA--KSLAGVFGGGQIDEDLYEELETVLITSDMDMEATEYLMKDVRDRVSLK 188

Query: 132 KLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRL 191
            LK G+E++ ALK+ + +L+K    K  +    ++P VIM+ G+NG GKTTS+GKLA   
Sbjct: 189 GLKDGNELRGALKEALYDLIKPL-EKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKYF 248

Query: 192 KNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQYVSLIVLSQAV 251
           + +G  +L+AAGDTFRAAA +QL+ W ER          +N    S     S  V   AV
Sbjct: 249 QAQGKSVLLAAGDTFRAAAREQLQAWGER----------NNVTVISQTTGDSAAVCFDAV 308

Query: 252 KKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTGLNML 311
           +  K  G DIVL DT+GRL T   LMEE+   K+ ++K MP AP+EI+ VLD   G N +
Sbjct: 309 QAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAV 368

Query: 312 PQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFDPEAF 371
            Q + F+D +G+TGLI+TKLDG+A+GG + ++  +  +PV+++GVGEG++DL+PFD  AF
Sbjct: 369 NQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAF 419

Query: 372 VDAI 375
           VDA+
Sbjct: 429 VDAL 419

[Close]

BLAST of Carg24953 vs. TrEMBL
Match: tr|A0A0A0L8Y8|A0A0A0L8Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122650 PE=4 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 5.5e-187
Identity = 348/376 (92.55%), Postives = 358/376 (95.21%), Query Frame = 0


Query: 1   MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60
           MAAASLS LSFLSNPSPRSL VPSLR T+P R+    GSRFRCSAGQTGFFTRLGRLLKE
Sbjct: 1   MAAASLSQLSFLSNPSPRSLFVPSLRPTTPFRRIHGDGSRFRCSAGQTGFFTRLGRLLKE 60

Query: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120
           KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV
Sbjct: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120

Query: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180
           +SLRDDIL+GKLKSGSEIK+ALKKNVLELLKGKGSKT+LQLGFRKPAVIMIVGVNGGGKT
Sbjct: 121 DSLRDDILAGKLKSGSEIKEALKKNVLELLKGKGSKTDLQLGFRKPAVIMIVGVNGGGKT 180

Query: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQY 240
           TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWA+R GCEIVVAEK+NAKASS    
Sbjct: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWADRTGCEIVVAEKENAKASS---- 240

Query: 241 VSLIVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV 300
               VLSQAVK+GKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAV KV+PGAPNEILQV
Sbjct: 241 ----VLSQAVKRGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVAKVIPGAPNEILQV 300

Query: 301 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 360
           LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE
Sbjct: 301 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 360

Query: 361 DLQPFDPEAFVDAIFS 377
           DLQPFDPEAFVDAIFS
Sbjct: 361 DLQPFDPEAFVDAIFS 368

[Close]

BLAST of Carg24953 vs. TrEMBL
Match: tr|A0A1S3AV68|A0A1S3AV68_CUCME (cell division protein FtsY homolog, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483298 PE=4 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 6.1e-186
Identity = 345/376 (91.76%), Postives = 358/376 (95.21%), Query Frame = 0


Query: 1   MAAASLSHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKE 60
           MAAASLS LSFLSNPSPRSLIVPSLR T+P R+    GSRFRCSAGQTGFFTRLGRLLKE
Sbjct: 49  MAAASLSQLSFLSNPSPRSLIVPSLRPTTPFRRIHGDGSRFRCSAGQTGFFTRLGRLLKE 108

Query: 61  KAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIV 120
           KAKSDVEK+FSGFSKTRDNLAVIDELLLYWNLAETDRVL+ELEEALLVSDFGPRITIKIV
Sbjct: 109 KAKSDVEKIFSGFSKTRDNLAVIDELLLYWNLAETDRVLEELEEALLVSDFGPRITIKIV 168

Query: 121 ESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKT 180
           +SLRDDIL+GKLKSGSEIK+ALKKNVLELLKGKGSK +LQLGFRKPAVIMIVGVNGGGKT
Sbjct: 169 DSLRDDILAGKLKSGSEIKEALKKNVLELLKGKGSKNDLQLGFRKPAVIMIVGVNGGGKT 228

Query: 181 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQY 240
           TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWA+R GCEIVVAE++NAKASS    
Sbjct: 229 TSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWADRTGCEIVVAERENAKASS---- 288

Query: 241 VSLIVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQV 300
               VLSQAVK+GKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAV KV+PGAPNEILQV
Sbjct: 289 ----VLSQAVKRGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVAKVIPGAPNEILQV 348

Query: 301 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 360
           LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE
Sbjct: 349 LDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLE 408

Query: 361 DLQPFDPEAFVDAIFS 377
           DLQPFDPEAFVDAIFS
Sbjct: 409 DLQPFDPEAFVDAIFS 416

[Close]

BLAST of Carg24953 vs. TrEMBL
Match: tr|A0A2N9GLA4|A0A2N9GLA4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31118 PE=3 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 3.7e-167
Identity = 314/380 (82.63%), Postives = 340/380 (89.47%), Query Frame = 0


Query: 3   AASLSHLSFLSNPSPRS------LIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGR 62
           AAS +HLS LS PSP +      L +P+ R T+P    R   SRF+CSAGQTGFFTRLGR
Sbjct: 2   AASPAHLSLLSKPSPTTSSPHLLLNLPNTRSTTPFHHTRPANSRFKCSAGQTGFFTRLGR 61

Query: 63  LLKEKAKSDVEKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRIT 122
           L+KEKAKSDVEK+FSGFSKTRDNLAVIDELLLYWNLA+TD+VLDELEEALLVSDFGPRIT
Sbjct: 62  LIKEKAKSDVEKIFSGFSKTRDNLAVIDELLLYWNLADTDKVLDELEEALLVSDFGPRIT 121

Query: 123 IKIVESLRDDILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNG 182
           IKIV+ LR+DIL+GKLKSGSEIK+ALK +VLEL+  +GSKTELQLGFRKPAV+MIVGVNG
Sbjct: 122 IKIVDRLREDILAGKLKSGSEIKEALKNSVLELITTRGSKTELQLGFRKPAVVMIVGVNG 181

Query: 183 GGKTTSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASS 242
           GGKTTSLGKLA+RLKNEGAKILMAAGDTFRAAASDQLEIWAER GCEIVVAEKD AKAS+
Sbjct: 182 GGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEKDKAKASA 241

Query: 243 GMQYVSLIVLSQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNE 302
                   VLSQAVK+GKE GFD+VLCDTSGRLHTNYSLMEELIACKKAV KV+  APNE
Sbjct: 242 --------VLSQAVKRGKEQGFDVVLCDTSGRLHTNYSLMEELIACKKAVGKVVSSAPNE 301

Query: 303 ILQVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVG 362
           IL VLDGTTGLNMLPQAREFN+VVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVG
Sbjct: 302 ILLVLDGTTGLNMLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVG 361

Query: 363 EGLEDLQPFDPEAFVDAIFS 377
           EG+EDLQPFD EAFV+AIFS
Sbjct: 362 EGVEDLQPFDAEAFVNAIFS 373

[Close]

BLAST of Carg24953 vs. TrEMBL
Match: tr|A0A061DTJ5|A0A061DTJ5_THECC (Signal recognition particle receptor protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005404 PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.2e-165
Identity = 313/369 (84.82%), Postives = 332/369 (89.97%), Query Frame = 0


Query: 7   SHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKEKAKSDV 66
           + LS +S PSP    +P  R  +PS   R   SRF+C A QTGFFTRLGRL+KEKAKSDV
Sbjct: 85  TQLSLISKPSPLFSNLPRTRF-NPSTTARPTASRFKCLASQTGFFTRLGRLIKEKAKSDV 144

Query: 67  EKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLRDD 126
           EK+FSGFSKTRDNLAVIDELLLYWNLA+TDRVLDELEEALLVSDFGPRITIKIVESLR+D
Sbjct: 145 EKIFSGFSKTRDNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPRITIKIVESLRED 204

Query: 127 ILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKL 186
           ILSGKLKSGSEIKDALKK VL+LL  KGSKTEL+LGFRKPAVIMIVGVNGGGKTTSLGKL
Sbjct: 205 ILSGKLKSGSEIKDALKKCVLDLLTKKGSKTELRLGFRKPAVIMIVGVNGGGKTTSLGKL 264

Query: 187 AFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQYVSLIVL 246
           A+RLKNEGAKILMAAGDTFRAAASDQLEIWAER GCEIVVAEK+NAKASS        VL
Sbjct: 265 AYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEKENAKASS--------VL 324

Query: 247 SQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTG 306
           SQAVK+GKE GFDIVLCDTSGRLHTN+SLMEELIACKKAV KV+PGAPNEIL VLDG TG
Sbjct: 325 SQAVKRGKEKGFDIVLCDTSGRLHTNFSLMEELIACKKAVGKVIPGAPNEILLVLDGNTG 384

Query: 307 LNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFD 366
           LNMLPQAREFN+VVGITG ILTKLDGSARGGCVVSVVDELGIPVKF+GVGEGLEDLQPFD
Sbjct: 385 LNMLPQAREFNEVVGITGFILTKLDGSARGGCVVSVVDELGIPVKFLGVGEGLEDLQPFD 444

Query: 367 PEAFVDAIF 376
            EAFV+AIF
Sbjct: 445 AEAFVNAIF 444

[Close]

BLAST of Carg24953 vs. TrEMBL
Match: tr|A0A061DVG5|A0A061DVG5_THECC (Signal recognition particle receptor protein, chloroplast (FTSY) isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_005404 PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.2e-165
Identity = 313/369 (84.82%), Postives = 332/369 (89.97%), Query Frame = 0


Query: 7   SHLSFLSNPSPRSLIVPSLRLTSPSRKGRVGGSRFRCSAGQTGFFTRLGRLLKEKAKSDV 66
           + LS +S PSP    +P  R  +PS   R   SRF+C A QTGFFTRLGRL+KEKAKSDV
Sbjct: 5   TQLSLISKPSPLFSNLPRTRF-NPSTTARPTASRFKCLASQTGFFTRLGRLIKEKAKSDV 64

Query: 67  EKVFSGFSKTRDNLAVIDELLLYWNLAETDRVLDELEEALLVSDFGPRITIKIVESLRDD 126
           EK+FSGFSKTRDNLAVIDELLLYWNLA+TDRVLDELEEALLVSDFGPRITIKIVESLR+D
Sbjct: 65  EKIFSGFSKTRDNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPRITIKIVESLRED 124

Query: 127 ILSGKLKSGSEIKDALKKNVLELLKGKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKL 186
           ILSGKLKSGSEIKDALKK VL+LL  KGSKTEL+LGFRKPAVIMIVGVNGGGKTTSLGKL
Sbjct: 125 ILSGKLKSGSEIKDALKKCVLDLLTKKGSKTELRLGFRKPAVIMIVGVNGGGKTTSLGKL 184

Query: 187 AFRLKNEGAKILMAAGDTFRAAASDQLEIWAERCGCEIVVAEKDNAKASSGMQYVSLIVL 246
           A+RLKNEGAKILMAAGDTFRAAASDQLEIWAER GCEIVVAEK+NAKASS        VL
Sbjct: 185 AYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEKENAKASS--------VL 244

Query: 247 SQAVKKGKEGGFDIVLCDTSGRLHTNYSLMEELIACKKAVKKVMPGAPNEILQVLDGTTG 306
           SQAVK+GKE GFDIVLCDTSGRLHTN+SLMEELIACKKAV KV+PGAPNEIL VLDG TG
Sbjct: 245 SQAVKRGKEKGFDIVLCDTSGRLHTNFSLMEELIACKKAVGKVIPGAPNEILLVLDGNTG 304

Query: 307 LNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGLEDLQPFD 366
           LNMLPQAREFN+VVGITG ILTKLDGSARGGCVVSVVDELGIPVKF+GVGEGLEDLQPFD
Sbjct: 305 LNMLPQAREFNEVVGITGFILTKLDGSARGGCVVSVVDELGIPVKFLGVGEGLEDLQPFD 364

Query: 367 PEAFVDAIF 376
            EAFV+AIF
Sbjct: 365 AEAFVNAIF 364

The following BLAST results are available for this feature:

BLAST of Carg24953 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934037.1	9.5e-199	97.87	cell division protein FtsY homolog, chloroplastic [Cucurbita moschata]	[more]
XP_023540627.1	1.0e-197	97.34	cell division protein FtsY homolog, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022975096.1	1.8e-197	97.34	cell division protein FtsY homolog, chloroplastic [Cucurbita maxima]	[more]
XP_004133877.1	8.3e-187	92.55	PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Cucumis...	[more]
XP_008438084.1	9.2e-186	91.76	PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Cucumis...	[more]

BLAST of Carg24953 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45770.2	4.4e-158	78.39	signal recognition particle receptor protein, chloroplast (FTSY)	[more]
AT5G03940.1	1.1e-39	37.54	chloroplast signal recognition particle 54 kDa subunit	[more]
AT1G15310.1	1.1e-26	29.93	signal recognition particle 54 kDa subunit	[more]
AT1G48900.1	1.7e-24	29.00	Signal recognition particle, SRP54 subunit protein	[more]
AT4G30600.1	5.5e-23	29.74	signal recognition particle receptor alpha subunit family protein	[more]

BLAST of Carg24953 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O80842\|CFTSY_ARATH	6.6e-159	79.84	Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
sp\|P51835\|FTSY_BACSU	7.0e-60	37.69	Signal recognition particle receptor FtsY OS=Bacillus subtilis (strain 168) OX=2...	[more]
sp\|P57010\|FTSY_NEIMA	1.3e-58	42.43	Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup A ...	[more]
sp\|P57011\|FTSY_NEIMB	1.3e-58	42.43	Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup B ...	[more]
sp\|O30391\|FTSY_NEIMC	8.5e-58	42.11	Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup C ...	[more]

BLAST of Carg24953 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L8Y8\|A0A0A0L8Y8_CUCSA	5.5e-187	92.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122650 PE=4 SV=1	[more]
tr\|A0A1S3AV68\|A0A1S3AV68_CUCME	6.1e-186	91.76	cell division protein FtsY homolog, chloroplastic isoform X1 OS=Cucumis melo OX=...	[more]
tr\|A0A2N9GLA4\|A0A2N9GLA4_FAGSY	3.7e-167	82.63	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31118 PE=3 SV=1	[more]
tr\|A0A061DTJ5\|A0A061DTJ5_THECC	1.2e-165	84.82	Signal recognition particle receptor protein isoform 1 OS=Theobroma cacao OX=364...	[more]
tr\|A0A061DVG5\|A0A061DVG5_THECC	1.2e-165	84.82	Signal recognition particle receptor protein, chloroplast (FTSY) isoform 2 OS=Th...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006614	SRP-dependent cotranslational protein targeting to membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR036225	SRP/SRP_N
IPR004390	SR_rcpt_FtsY
IPR003593	AAA+_ATPase
IPR013822	Signal_recog_particl_SRP54_hlx
IPR000897	SRP54_GTPase_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24953-RA	Carg24953-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	SMART	SM00962	SRP54_3	coord: 166..376 e-value: 3.0E-97 score: 339.1
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PFAM	PF00448	SRP54	coord: 166..375 e-value: 2.2E-67 score: 226.4
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PROSITE	PS00300	SRP54	coord: 349..362
IPR013822	Signal recognition particle, SRP54 subunit, helical bundle	SMART	SM00963	SRP54_N_2	coord: 69..150 e-value: 2.3E-7 score: 40.5
IPR013822	Signal recognition particle, SRP54 subunit, helical bundle	PFAM	PF02881	SRP54_N	coord: 96..144 e-value: 4.4E-7 score: 30.0
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 165..346 e-value: 8.2E-5 score: 32.0
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 158..376 e-value: 1.0E-71 score: 242.8
None	No IPR available	GENE3D	G3DSA:1.20.120.140		coord: 56..155 e-value: 1.3E-25 score: 91.3
None	No IPR available	PANTHER	PTHR43134	FAMILY NOT NAMED	coord: 47..376
IPR004390	Signal-recognition particle receptor FtsY	TIGRFAM	TIGR00064	TIGR00064	coord: 95..375 e-value: 9.9E-88 score: 291.9
IPR004390	Signal-recognition particle receptor FtsY	PANTHER	PTHR43134:SF2	CELL DIVISION PROTEIN FTSY HOMOLOG, CHLOROPLASTIC	coord: 47..376
IPR036225	SRP/SRP receptor, N-terminal	SUPERFAMILY	SSF47364	Domain of the SRP/SRP receptor G-proteins	coord: 66..143
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 163..375

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24953	Cla021256	Watermelon (97103) v1	carwmB0647
Carg24953	Csa3G122650	Cucumber (Chinese Long) v2	carcuB0668
Carg24953	MELO3C006136	Melon (DHL92) v3.5.1	carmeB0647
Carg24953	ClCG05G001760	Watermelon (Charleston Gray)	carwcgB0630
Carg24953	CSPI03G09030	Wild cucumber (PI 183967)	carcpiB0677
Carg24953	Cucsa.258140	Cucumber (Gy14) v1	carcgyB0723
Carg24953	CmaCh06G010990	Cucurbita maxima (Rimu)	carcmaB0919
Carg24953	CmaCh14G020170	Cucurbita maxima (Rimu)	carcmaB0918
Carg24953	CmoCh06G011260	Cucurbita moschata (Rifu)	carcmoB0892
Carg24953	CmoCh14G020770	Cucurbita moschata (Rifu)	carcmoB0891
Carg24953	Lsi05G020150	Bottle gourd (USVL1VR-Ls)	carlsiB592
Carg24953	Cp4.1LG03g16870	Cucurbita pepo (Zucchini)	carcpeB0922
Carg24953	Cp4.1LG08g01610	Cucurbita pepo (Zucchini)	carcpeB0923
Carg24953	CsGy3G009100	Cucumber (Gy14) v2	carcgybB0644
Carg24953	MELO3C006136.2	Melon (DHL92) v3.6.1	carmedB0657
Carg24953	CsaV3_3G009150	Cucumber (Chinese Long) v3	carcucB0679
Carg24953	Cla97C05G082190	Watermelon (97103) v2	carwmbB0676
Carg24953	Bhi01G000282	Wax gourd	carwgoB0763

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24953	Carg14797	Silver-seed gourd	carcarB548

The following block(s) are covering this gene:

None