CmoCh06G009170 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G009170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCytochrome c
LocationCmo_Chr06 : 6470120 .. 6473644 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAATAAGAAAAATAAATAAATAAATATAGAGAACTGTAAGAAGACAATTAAGGCCCTATGCGGTGCGTTGGTATAAAATGATGCAGAGTATGGAGAACTCGAGAAACGTTGCGAGCCCTAGCCCTCAGATCTGAACAACATCTCATTCCAACGCCATGGCCAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATTTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAGGGTGCTGGTCACAAGCAAGGTTAGAGATTATCATTTCTTATTTATATGTTTGGATTTCTTGCGATTCGAAATCGGAGGTTAGAGATCTCGAAGTCTCTATTAGTAATCTGAACATGTTCGTCCATCTTTGAGGATTCAGATGCTGAGTTTTGCTACGTTTGAATCGATCTGATCGTTTTCTCTGTTTTCCCCCAATATACTCTAGGAAACTAATACCTATTGGCCTTCATCAAATTTTTCCATCGCCTACCAGGAACATGATATTTATTATTATTTATTTATTTTTTTTTTTAATGGAAATTTGACTTGGTGAAATGATTTTGGAAATACTTGGAAGCGTTTACTTTTATGAAACTAATAACAAATATATGGATTTTTTTTTTTAAAAAAAATCATTTAATACAGTAATTTTTTTATATCTCACTAATTATTCATTAACTTGGTAATGATAAATTAGTACGTTTTTTTTTTTTTTTTTATGGCGTTGGCCTTGGTGAGTAGAAATCATGATTAAGGTGAACAATCGATTTTAGTCAATAGTATATGGCTTCTTACTTTTTATTTTTGATATTAGTTTTTTAGCTCCAGTTTTTGTGCTATTTTACGGAAGTTGTGTTAGATTTGCAGTTACTTTTATTCTGTTTCAATTGGGTTTCATTAGGTTTTGAGTTGTGGATGTACGAAGCTTATTGTTGCGTAATGTTTGACTTTTTTATTTTTTATTTGGAGTATATTTTCATCCCTCCCTTTCGCTTTTTCATGAGGAGAAAATCAGCCTTTCTATATTCATGTGTAAGTAGACTCTAAGACGAGCAATGGCACTTGAATCTTGCAGGTCCCAATTTGAATGGGCTATTTGGACGCCAATCTGGCACAACTGCTGGATACTCTTATTCTGCTGCCAACAAGAATATGGCCGTGATATGGGAAGAAAAGACCTTGTATGACTACTTGCTTAACCCCAAGAAGGTAACTCCCGTCTATTTCTCAACACTTGTGGCCTTGTAGTATTTGATTTGAAGCTAGTTTATTTCCCTGCGTTGTCCTCCAGATGTTCTGATTGTTGATTCATTGATATTACTGTGAATTCACCTAAATAGGCTTGCCGTGTTCCTTACTAGCCTTTTTCTTCATAATGCCTCTTCAACTGATCCCCAAGTGCTGAAATGTTTTTTGCAACTTTGATCAACCTGTTCGTCTTTTACCATCTTACAAGTAGCCTGAACTATAAAAATATGTACATTCCTTTTCTACAATAATAGCCAAAAGTTTTGAAGAACGGTCAACCACCATTTGCGTCACAAATCTCCCTTCACTTGGAGTTTCAATCATAATTTAAGCAAAAATAAAACATAAAAAAATTGCCTCTTATATCTGAATATGCTTCAGACAAGCACGTTAATAGTTTCTTGACACATGATTGATTTCCACAATTTCCCTCGATTCCTTCACAAGTCTCCTTTAGGAAAATCACTTGCCCTTAAATCTATCTTTTGTGACATGATTAACTTTTTTGGCATTGATGCTATTAGGAACACTCTGGTCCCAATGTATCGACACGGTAAATCCATTTAGGCATTAGTTATGTGTCTTCCCTTGCTCTCTTCGCTTCTTCTTGCAGCTATAACAAAGTTCATCCTGAACCCTTGCTTAGGGTTTCCTCTCAATGGAAATCTTCATTTGCCCTCAAGTTTCAATGACATAATTAACGAAGGAAGTTTGGAAAATCCCAGTCTATTCTTCTCAGTTTGGCTATAAAATGAAAAATTCAAAACTTCCAAAGCAAGTGAAATTCTCTAAGGGAACTTTTGAGTTAAGTGTTAACGTTCACTCAAATCCCTTGATAATGTCCCTTGTGATCTCACTGTGTCTATGAACACCCTCATTTTCAGCACTTAAAACTGTTTTCTTTATTCCTAGATGGTCATCTTTCTAATAGTGATGGCTTTATGGCCACAATGTTTGATGGTTTATTTTTTGCCTATTTGTTGGCTTGAAAGGAAAGAAACAAGTCTTCTGGTTATGGCGAATAAAATCCCATGTTATACTCGTCGTTTTATCATTTAACCATGTTTGTTAGGTTATGATTCTTAAGTCTGGATATGTTAAAGCTTGTGTTGCGAGTTTATTTTAAGAAACAGGGGTCAGTATACTATTTGAATTGTGCAGATAAATGGGGTTTAGTTTGTGTAACCTATGTTCATCTTTTTTGTTTTGGTTTTGGATTTATAAGAAATTTTAATAATTTACATGTTCACCATTTTTTGTATAGAAAATTCATTTCTACATTAAATTTGGTAAAAATATCATAATATTTTTCTTTTGTAATCAGCCAGTACAATGAGTAATGTTTAAAATAGTTTTAATACCGTTGTCAACCCTGTAACCTTGAATAATTATTTTGTAATGTGAATCTTCAACTACTTTTGTAATTGCTTCTCAAATATTCACCAAGGTGCGATGAAGTGTGTATAAATTCTTACAAACAGGCCAAGCTTTCTGAACCATTGTTATCTTTCTAGTTCTTTCTTGATGTTAATTTTGTGTAATTTACAAACCCTCCAATCATCTTCTTTTTTGAAAATGCATCCTCTTGTGTGGAATCTGCATTAACTCTAGTGCTTATGATTGCTATGGTTTATAGAGGAATGTGAAGCTAATTGTAAATTTGGAGGAATGAAAAGAATACTGAGCTTGGTTTATGAATTTTGTTTGTCCTTCTTTGATCAATGATCACTTATGTCTCTTTCAAAGTTTTAGGAGATGGTAGTGTTTCAGTTGGTAAATATTCTAACAAAAAGTTGGGGGATGTGTATCCATTGTGCAGTATATTCCTGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAAGCAACTGCTTAATTGCATAATATATGGTTGATGCTTCTTCCAATCTACAATTTTTTGCTATCAGTTTTCCCCATCATCGTTAAAATAAGAACATTGAGAGGAGAGGAACCTTAGATGAAAAGTTGGAGGTGGTCACACACACACTTTTTTTTCTTTTTCATTAAATTCTTACTTCCCTTCCTTCGCTACACTCATTTGCAGAGTTCGCCCCATTTGTAGCTTACATTATTGTTATGTGAACATAACTGCTACAATTTTTTTGGCCAGCCCGGTTCTGCCAACTTATTTTCTCATAATAAATATCACACTTGTTAGAGACTACCTATTTTCAATGCATTATATTAAGATGGAACTTCAACATTTCTGG

mRNA sequence

GCAAATAAGAAAAATAAATAAATAAATATAGAGAACTGTAAGAAGACAATTAAGGCCCTATGCGGTGCGTTGGTATAAAATGATGCAGAGTATGGAGAACTCGAGAAACGTTGCGAGCCCTAGCCCTCAGATCTGAACAACATCTCATTCCAACGCCATGGCCAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATTTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAGGGTGCTGGTCACAAGCAAGGTCCCAATTTGAATGGGCTATTTGGACGCCAATCTGGCACAACTGCTGGATACTCTTATTCTGCTGCCAACAAGAATATGGCCGTGATATGGGAAGAAAAGACCTTGTATGACTACTTGCTTAACCCCAAGAAGTATATTCCTGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAAGCAACTGCTTAATTGCATAATATATGGTTGATGCTTCTTCCAATCTACAATTTTTTGCTATCAGTTTTCCCCATCATCGTTAAAATAAGAACATTGAGAGGAGAGGAACCTTAGATGAAAAGTTGGAGGTGGTCACACACACACTTTTTTTTCTTTTTCATTAAATTCTTACTTCCCTTCCTTCGCTACACTCATTTGCAGAGTTCGCCCCATTTGTAGCTTACATTATTGTTATGTGAACATAACTGCTACAATTTTTTTGGCCAGCCCGGTTCTGCCAACTTATTTTCTCATAATAAATATCACACTTGTTAGAGACTACCTATTTTCAATGCATTATATTAAGATGGAACTTCAACATTTCTGG

Coding sequence (CDS)

ATGGCCAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATTTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAGGGTGCTGGTCACAAGCAAGGTCCCAATTTGAATGGGCTATTTGGACGCCAATCTGGCACAACTGCTGGATACTCTTATTCTGCTGCCAACAAGAATATGGCCGTGATATGGGAAGAAAAGACCTTGTATGACTACTTGCTTAACCCCAAGAAGTATATTCCTGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAAGCAACTGCTTAA
Homology
[Close]
BLAST of CmoCh06G009170 vs. Swiss-Prot
Match: CYC_VIGRR (Cytochrome c OS=Vigna radiata var. radiata PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.7e-59
Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 61
           ASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYS AN
Sbjct: 1   ASFDEAPPGNSKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSTAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Sbjct: 61  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 111

[Close]
BLAST of CmoCh06G009170 vs. Swiss-Prot
Match: CYC_CUCMA (Cytochrome c OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.3e-59
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAAN
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           KN AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA
Sbjct: 61  KNRAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

[Close]
BLAST of CmoCh06G009170 vs. Swiss-Prot
Match: CYC_BRANA (Cytochrome c OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 3.9e-59
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           KN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA
Sbjct: 61  KNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

[Close]
BLAST of CmoCh06G009170 vs. Swiss-Prot
Match: CYC_BRAOL (Cytochrome c OS=Brassica oleracea PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 3.9e-59
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           KN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA
Sbjct: 61  KNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

[Close]
BLAST of CmoCh06G009170 vs. Swiss-Prot
Match: CYC2_ARATH (Cytochrome c-2 OS=Arabidopsis thaliana GN=CYTC-2 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.1e-57
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTT GYSYSAA
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           NK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE TA
Sbjct: 61  NKSMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEGTA 112

[Close]
BLAST of CmoCh06G009170 vs. TrEMBL
Match: A0A0S3RSC9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G064500 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 5.1e-58
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60
           MASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYS A
Sbjct: 1   MASFDEAPPGNSKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSTA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of CmoCh06G009170 vs. TrEMBL
Match: A0A0L9U2E1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g036400 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 5.1e-58
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60
           MASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYS A
Sbjct: 1   MASFDEAPPGNSKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSTA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of CmoCh06G009170 vs. TrEMBL
Match: A0A078FH37_BRANA (BnaA07g10260D protein OS=Brassica napus GN=BnaC07g13460D PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.5e-57
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60
           MASFDEAPPGNSKAGEKIF+TKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA
Sbjct: 1   MASFDEAPPGNSKAGEKIFRTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           NKN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA
Sbjct: 61  NKNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 112

[Close]
BLAST of CmoCh06G009170 vs. TrEMBL
Match: A0A0A0KPD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G244150 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.5e-57
Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAA
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEAT 112
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+T
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 111

[Close]
BLAST of CmoCh06G009170 vs. TrEMBL
Match: M4D786_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.5e-57
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60
           MASFDEAPPGNSKAGEKIF+TKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA
Sbjct: 1   MASFDEAPPGNSKAGEKIFRTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           NKN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA
Sbjct: 61  NKNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 112

[Close]
BLAST of CmoCh06G009170 vs. TAIR10
Match: AT4G10040.1 (AT4G10040.1 cytochrome c-2)

HSP 1 Score: 222.6 bits (566), Expect = 1.2e-58
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTT GYSYSAA
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           NK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE TA
Sbjct: 61  NKSMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEGTA 112

[Close]
BLAST of CmoCh06G009170 vs. TAIR10
Match: AT1G22840.1 (AT1G22840.1 CYTOCHROME C-1)

HSP 1 Score: 221.1 bits (562), Expect = 3.5e-58
Identity = 104/112 (92.86%), Postives = 108/112 (96.43%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60
           MASFDEAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQGPNLNGLFGRQSGTTAGYSYSAA
Sbjct: 1   MASFDEAPPGNAKAGEKIFRTKCAQCHTVEAGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           NKN AV WEEK LYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Sbjct: 61  NKNKAVEWEEKALYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of CmoCh06G009170 vs. NCBI nr
Match: gi|950955084|ref|XP_014496567.1| (PREDICTED: cytochrome c [Vigna radiata var. radiata])

HSP 1 Score: 231.5 bits (589), Expect = 7.3e-58
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60
           MASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYS A
Sbjct: 1   MASFDEAPPGNSKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSTA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of CmoCh06G009170 vs. NCBI nr
Match: gi|118013|sp|P00052.1|CYC_VIGRR (RecName: Full=Cytochrome c)

HSP 1 Score: 229.6 bits (584), Expect = 2.8e-57
Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 61
           ASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYS AN
Sbjct: 1   ASFDEAPPGNSKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSTAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Sbjct: 61  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 111

[Close]
BLAST of CmoCh06G009170 vs. NCBI nr
Match: gi|729296184|ref|XP_010542745.1| (PREDICTED: cytochrome c [Tarenaya hassleriana])

HSP 1 Score: 229.6 bits (584), Expect = 2.8e-57
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60
           MASFDEAPPGNSKAGEKIF+TKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAA
Sbjct: 1   MASFDEAPPGNSKAGEKIFRTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           NKNMAV+WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKEATA
Sbjct: 61  NKNMAVMWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATA 112

[Close]
BLAST of CmoCh06G009170 vs. NCBI nr
Match: gi|449457373|ref|XP_004146423.1| (PREDICTED: cytochrome c [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 3.6e-57
Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAA
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEAT 112
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+T
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 111

[Close]
BLAST of CmoCh06G009170 vs. NCBI nr
Match: gi|117976|sp|P00051.1|CYC_CUCMA (RecName: Full=Cytochrome c)

HSP 1 Score: 229.2 bits (583), Expect = 3.6e-57
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAAN
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 113
           KN AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA
Sbjct: 61  KNRAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

The following BLAST results are available for this feature:
BLAST of CmoCh06G009170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CYC_VIGRR1.7e-5997.30Cytochrome c OS=Vigna radiata var. radiata PE=1 SV=1[more]
CYC_CUCMA2.3e-5998.20Cytochrome c OS=Cucurbita maxima PE=1 SV=1[more]
CYC_BRANA3.9e-5998.20Cytochrome c OS=Brassica napus PE=1 SV=1[more]
CYC_BRAOL3.9e-5998.20Cytochrome c OS=Brassica oleracea PE=1 SV=1[more]
CYC2_ARATH2.1e-5793.75Cytochrome c-2 OS=Arabidopsis thaliana GN=CYTC-2 PE=1 SV=1[more]
BLAST of CmoCh06G009170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0S3RSC9_PHAAN5.1e-5897.32Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G064500 PE=... [more]
A0A0L9U2E1_PHAAN5.1e-5897.32Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g036400 PE=3 SV=1[more]
A0A078FH37_BRANA2.5e-5797.32BnaA07g10260D protein OS=Brassica napus GN=BnaC07g13460D PE=3 SV=1[more]
A0A0A0KPD8_CUCSA2.5e-5797.30Uncharacterized protein OS=Cucumis sativus GN=Csa_5G244150 PE=3 SV=1[more]
M4D786_BRARP2.5e-5797.32Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1[more]
BLAST of CmoCh06G009170 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10040.11.2e-5893.75 cytochrome c-2[more]
AT1G22840.13.5e-5892.86 CYTOCHROME C-1[more]
BLAST of CmoCh06G009170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|950955084|ref|XP_014496567.1|7.3e-5897.32PREDICTED: cytochrome c [Vigna radiata var. radiata][more]
gi|118013|sp|P00052.1|CYC_VIGRR2.8e-5797.30RecName: Full=Cytochrome c[more]
gi|729296184|ref|XP_010542745.1|2.8e-5796.43PREDICTED: cytochrome c [Tarenaya hassleriana][more]
gi|449457373|ref|XP_004146423.1|3.6e-5797.30PREDICTED: cytochrome c [Cucumis sativus][more]
gi|117976|sp|P00051.1|CYC_CUCMA3.6e-5798.20RecName: Full=Cytochrome c[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002327Cyt_c_1A/1B
IPR009056Cyt_c-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0020037heme binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005758 mitochondrial intermembrane space
cellular_component GO:0070469 respiratory chain
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0020037 heme binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G009170.1CmoCh06G009170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002327Cytochrome c, class IA/ IBPRINTSPR00604CYTCHRMECIABcoord: 101..109
score: 2.4E-36coord: 84..94
score: 2.4E-36coord: 22..29
score: 2.4E-36coord: 65..81
score: 2.4E-36coord: 35..50
score: 2.4E-36coord: 51..61
score: 2.4
IPR002327Cytochrome c, class IA/ IBPANTHERPTHR11961CYTOCHROME Ccoord: 1..112
score: 6.8
IPR009056Cytochrome c-like domainGENE3DG3DSA:1.10.760.10coord: 9..111
score: 6.4
IPR009056Cytochrome c-like domainPFAMPF00034Cytochrom_Ccoord: 13..109
score: 1.7
IPR009056Cytochrome c-like domainPROFILEPS51007CYTCcoord: 10..111
score: 16
IPR009056Cytochrome c-like domainunknownSSF46626Cytochrome ccoord: 9..109
score: 1.76
NoneNo IPR availablePANTHERPTHR11961:SF8SUBFAMILY NOT NAMEDcoord: 1..112
score: 6.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G009170CmaCh06G008830Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G009170Cp4.1LG00g01220Cucurbita pepo (Zucchini)cmocpeB758
CmoCh06G009170Carg26075Silver-seed gourdcarcmoB0438
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G009170Cucumber (Chinese Long) v3cmocucB0965
CmoCh06G009170Watermelon (97103) v2cmowmbB815
CmoCh06G009170Wax gourdcmowgoB0991
CmoCh06G009170Cucurbita moschata (Rifu)cmocmoB227
CmoCh06G009170Cucumber (Gy14) v1cgycmoB0944
CmoCh06G009170Cucurbita maxima (Rimu)cmacmoB274
CmoCh06G009170Wild cucumber (PI 183967)cmocpiB827
CmoCh06G009170Cucumber (Chinese Long) v2cmocuB819
CmoCh06G009170Melon (DHL92) v3.5.1cmomeB745
CmoCh06G009170Watermelon (Charleston Gray)cmowcgB726
CmoCh06G009170Watermelon (97103) v1cmowmB780
CmoCh06G009170Cucurbita pepo (Zucchini)cmocpeB789
CmoCh06G009170Bottle gourd (USVL1VR-Ls)cmolsiB745
CmoCh06G009170Cucumber (Gy14) v2cgybcmoB413
CmoCh06G009170Melon (DHL92) v3.6.1cmomedB847