CmoCh06G005440 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G005440
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMal d 1-associated protein
LocationCmo_Chr06 : 2634673 .. 2637312 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGGGTATGGAGAGGCGCGTCTGGCGAATTGGATTCACCCGCCGGCGACGGTGTTACGTCTAATAATCCCAGCACTTGGTCTTCCGGCGATCGATGTTCGACTAGAAAAGTGGTGAAGTCGCAGTGCAAGACGGAGGAGGTCGAGCCCGGGAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGAGACTGCATCGGAAGGTATGTGCATCCGTGTTCCTCTGATTTCTGTTGTCCTGTGATAATTTATTTTAACCTAACTGTTATTGTCTTTCGAATTAAGATCTTAGTTTTCTACGGAAGTGTGAAGAAAAGAAAATTGGTTCGTTCTATTTGTTGTTGGCAAAGAGAAATTGTTAAACGTAGGTTTCGTTTCTTTATTTGGAATCAAATTGGTGTGATCCACATGGCTATTCCTAAGTTTGATTTCTTCTTTATTGTTTAGGGATATATCGTAGTTCTAAATTTTGAAGTATAATGTGCTAGGCTAAGGCTGATTCCTACGACTTGTTAAGTGAACATCTGTTTGATGCGTTGAAAATTCCGAGCCATTTGGGCGGTTTAATTTCTGATTTTGTTGCCGTGATTGGTTGTTTTAATGGAATCTTAGAGGGATGGACATTGAAATTGGAAGGTGCTAGGCTTACTGTTTGACATGTGAGTGATGATTTTTCTTGGGTTATTTGTATTGAAGGTTGAAGAATCATGACTTACCGGTTACCTCATAATTTTGTTCACTATGTTTTTTGGCCTAAATGACCAACATATAAGAATATTGATTTTTTCTTCTTGGTTATTTCACACACACTCACTTTCATTTCGGGTTCCTTCTGTCGAATTTTCTTCCAAATTTTGATAATTCATCACATAGAAAATGTAGATGCTTGCAAGGGACCGGAAAGAATCAAAATTTCCACACCCATTCAACATTTCATCCTAATAATTGTAAAAGCTTCTCTGGTGGTTTATATTCTTAAAGCACATCATATGAAAATTTTACAGTGTCCTCCCATGAAGGGACCTAGCAAATGAATAAATAATGTGTTTAACGTTCACTTTCTTAAAGTGTATGGGTTTCATAATTTGAGAATGTGTTTTGGAAGATGAGAATGAGAGTAGAAACTGAGAATGAGAGGAAGGAACAGATAAATGAAAGAAGAGACAAAAACTGAGTAGAAACTGAGAATGTGTTTTGGAAGATGAGAATGAGAGTGATGAAGGGGCATATGAAATAAGAGGGTTGAATGTGCTTTTTCTATCGTTCCTTAAGCGAAGTGCAACATCTCTAAACAATTAAAGTGAAAGAATGTAGCTGAGGTTATTTAATATATAAGAGCTCCTTCACTTTAAAATCTCTTCTGCGTTGTGATATAGAAAGGCAGGTTTAGGAAAAATATGTTTCTTGGATGGAAAATTATGAAGATGACCGAGGAATGCATTTCCTGGATTGCACTTGTGCTGGCTCGGTGTTTGATGGTTGAATGACTATGACATGATTGGAACTCATTGGTTAGTGCCTTGAGCCTCATGTAGTAGAATCCATGCATCATATATTGGAAAATATTGATTAGCCCTTAGATGAATGGTGATTAGGAACTTGAAGGGCAGTGTCTGGGAATATTTTTTCTGAGCCTGCCAGACGGAAGCTATTAGAACTCGTTAATGTTGTACATGGTCGGTTGCAAACTTGAAAATGATAAATTTTTTAACCTACATTGATGCTGCTTTAATTGCATGGAAGATCAAGTTGGAAAATATAGTAATCCCTTGCTTACATCGAATTCGAGCAGCCATCTACCGTGACAAAAACCGCCAGAAAGCCTTCCACTTGATATGTTGTAAGAGGATCACATGATATGATATTGGAGCTAGGAGTGAGGAAACTCTTTTCATTTATCGGATTGAACCAGGTGCTTTTGCTTCTTTAATGTGCTATGCTAAATTCTTAACACACGATGACTTCGGTTTTTGTGTTACCATGTTTTGATAGTATGAATGTATATCATTTGATAGATAGAACCCAAAGTGGAAAATTCATTTATAAAAGAACACATGTAAGGAATTTAAGAGCTCTTCCACCCCCCTCCAATCTATCAAAACCATCAGGAACTTGTGTCCTCTAGTTACTCATCTTCCCTTTTTTAAAATTACTTGCTTCTGGTTAGTTACTTTAGGCCTCTAGGTTGCTTCCCTGCTCCAACTGTTCTCCCCTTTTAGTTCAATTAAAGTGAGCTGAAGAGCTACCTATCAACTATACGAGTCATATGACTAAGTCATAGTTGCTTTGTTTCTTTACAGGCCGGTCGAAGTGATACAGTCCAATAGGGAATTTACAGAAGAGGATGTAACGAATGAGGTGGTTAATAATAGGTCATTCTCGTCAGGATCATCAGAATATCAACCATTTAATTTCCCTGGACTTCGCAGCGATATTGAAGCCATTGAACACAGCCTCTTCGGTAGCATGAAGGGGTTCTTTGATGCAGCTGAAGAGATTAGAAATGGTTTCTTTGGCTCTTTCAGAGATCCACCCCTATTCAGCAGAGAGCCTTCGTCCTCCCCATCGATGAGACAAAACGAGCCCGACTCCGGTCACGTTGACCTATCTGGATTGGCCAGGGATGTCTGA

mRNA sequence

ATGGGTGGGGTATGGAGAGGCGCGTCTGGCGAATTGGATTCACCCGCCGGCGACGGTGTTACGTCTAATAATCCCAGCACTTGGTCTTCCGGCGATCGATGTTCGACTAGAAAAGTGGTGAAGTCGCAGTGCAAGACGGAGGAGGTCGAGCCCGGGAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGAGACTGCATCGGAAGGCCGGTCGAAGTGATACAGTCCAATAGGGAATTTACAGAAGAGGATGTAACGAATGAGGTGGTTAATAATAGGTCATTCTCGTCAGGATCATCAGAATATCAACCATTTAATTTCCCTGGACTTCGCAGCGATATTGAAGCCATTGAACACAGCCTCTTCGGTAGCATGAAGGGGTTCTTTGATGCAGCTGAAGAGATTAGAAATGGTTTCTTTGGCTCTTTCAGAGATCCACCCCTATTCAGCAGAGAGCCTTCGTCCTCCCCATCGATGAGACAAAACGAGCCCGACTCCGGTCACGTTGACCTATCTGGATTGGCCAGGGATGTCTGA

Coding sequence (CDS)

ATGGGTGGGGTATGGAGAGGCGCGTCTGGCGAATTGGATTCACCCGCCGGCGACGGTGTTACGTCTAATAATCCCAGCACTTGGTCTTCCGGCGATCGATGTTCGACTAGAAAAGTGGTGAAGTCGCAGTGCAAGACGGAGGAGGTCGAGCCCGGGAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGAGACTGCATCGGAAGGCCGGTCGAAGTGATACAGTCCAATAGGGAATTTACAGAAGAGGATGTAACGAATGAGGTGGTTAATAATAGGTCATTCTCGTCAGGATCATCAGAATATCAACCATTTAATTTCCCTGGACTTCGCAGCGATATTGAAGCCATTGAACACAGCCTCTTCGGTAGCATGAAGGGGTTCTTTGATGCAGCTGAAGAGATTAGAAATGGTTTCTTTGGCTCTTTCAGAGATCCACCCCTATTCAGCAGAGAGCCTTCGTCCTCCCCATCGATGAGACAAAACGAGCCCGACTCCGGTCACGTTGACCTATCTGGATTGGCCAGGGATGTCTGA
Homology
[Close]
BLAST of CmoCh06G005440 vs. TrEMBL
Match: A0A0A0LGU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782830 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.6e-61
Identity = 134/198 (67.68%), Postives = 153/198 (77.27%), Query Frame = 1 

Query: 1   MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCER 60
           MG VWR  + + DS A D    NN ++ SS D CSTR VV+S CKTEEVEPGKFVRKCER
Sbjct: 1   MGWVWRDDTDDSDSFAADADKFNNSTSPSSSDWCSTRNVVRSHCKTEEVEPGKFVRKCER 60

Query: 61  TEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGS--SEYQPFNFPGLRSDIEA 120
           TEEILRDCIGRP EVI+SN+E TEEDVT+++V NRSFS GS  SE++P +FPGLRSDI+A
Sbjct: 61  TEEILRDCIGRPTEVIKSNKEITEEDVTDQMV-NRSFSLGSSPSEHRPLDFPGLRSDIDA 120

Query: 121 IEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ--------------- 180
           IE SLFGSMKGFF+AAEEI+NGFFGS RDPPLF+R+ SSS SMR+               
Sbjct: 121 IEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNRDSSSSASMRRGIPIEEDHDPVFFYN 180

[Close]
BLAST of CmoCh06G005440 vs. TrEMBL
Match: W9SK10_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016892 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.9e-47
Identity = 114/216 (52.78%), Postives = 138/216 (63.89%), Query Frame = 1 

Query: 1   MGGVWRGA---SGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRK 60
           MG VWR      G   SPAG+     N +T S GDR STRKVV+SQCKTEEVEPG+FVRK
Sbjct: 1   MGWVWRNEPDDGGSEISPAGEFREVGNANTRSDGDRRSTRKVVRSQCKTEEVEPGRFVRK 60

Query: 61  CERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGSSE-------------- 120
           CERTEEILRDC+GRPVEV+QSN+E+TE+DVT++V+   SF +GSSE              
Sbjct: 61  CERTEEILRDCVGRPVEVVQSNKEYTEDDVTDQVLKG-SFPTGSSEGGALDFPGLHSDID 120

Query: 121 --YQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSM 180
              + FNFPGLR DI+ IE S FG +  FF+ AEE++N FF    DP +F  + SSS + 
Sbjct: 121 AIERSFNFPGLRGDIDTIERSFFGGLGRFFEVAEEMKNDFFRGLGDPHIFDGDSSSSSAS 180

[Close]
BLAST of CmoCh06G005440 vs. TrEMBL
Match: M5VR87_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011952mg PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.9e-47
Identity = 114/197 (57.87%), Postives = 134/197 (68.02%), Query Frame = 1 

Query: 1   MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCER 60
           MG VWR    +  S AGD     NP   S G+RCSTRKV+K+QCKTEEVEPGKFVRKCE+
Sbjct: 1   MGWVWRDDEDDNKSTAGD----INPR--SVGERCSTRKVMKTQCKTEEVEPGKFVRKCEK 60

Query: 61  TEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGSSEYQPFNFPGLRSDIEAIE 120
           TE++LRDC GRPVEV+QSN+E+TE+DVT EV+   S   GSS++  F+FPGLRSDIE IE
Sbjct: 61  TEQLLRDCAGRPVEVVQSNKEYTEDDVTEEVLKG-SVYLGSSQHGAFDFPGLRSDIEDIE 120

Query: 121 HSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSS-PSMRQNEP------------- 180
            +  G +  FFDAAEE+RNGFF +F  P +F   PS S PS RQ  P             
Sbjct: 121 RTFMGGLSRFFDAAEEMRNGFFSAFGVPRIFDEGPSCSLPSKRQEVPIEGSQQEAFPKAN 180

[Close]
BLAST of CmoCh06G005440 vs. TrEMBL
Match: A0A059A3D5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01914 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.1e-45
Identity = 110/203 (54.19%), Postives = 137/203 (67.49%), Query Frame = 1 

Query: 1   MGGVWR-----GASGELDSPAGDGVTSNNPSTWSS--GDRCSTRKVVKSQCKTEEVEPGK 60
           MG VWR     G  G  D PA  G+     S  S+  GDRCSTRKVVKS+C+TEEVEPGK
Sbjct: 1   MGWVWRDDGDGGGDGGGDPPASGGIAEYGGSGGSAGTGDRCSTRKVVKSRCRTEEVEPGK 60

Query: 61  FVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGSSEYQPFNFPGLR 120
           F+RKCERTEEILRDC+GRPVEV+QSN+E+TE+DVT +V+   SF +GSS++  F+ PGL 
Sbjct: 61  FIRKCERTEEILRDCVGRPVEVVQSNKEYTEDDVTEQVLRG-SFPAGSSDHGVFDLPGLH 120

Query: 121 SDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ---------- 180
           SDI+AI  + FG++  FF+AAEE++ G FG F  P L   + SS  SMRQ          
Sbjct: 121 SDIDAIGRNFFGNLDRFFEAAEEMKKGLFGMFDGPSLHDGD-SSWSSMRQGVPIEEPSPR 180

[Close]
BLAST of CmoCh06G005440 vs. TrEMBL
Match: A0A165YSC4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_013453 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.3e-44
Identity = 99/195 (50.77%), Postives = 134/195 (68.72%), Query Frame = 1 

Query: 1   MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCER 60
           MG VW+    ++D+  GD  TS    + ++ DRC T+K+V S CKTEEVEPGKF+RKCE+
Sbjct: 1   MGWVWKD---DVDNGDGDVDTSPGQLSSTAEDRCYTKKIVSSNCKTEEVEPGKFIRKCEK 60

Query: 61  TEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGSSEYQPFNFPGLRSDIEAIE 120
           TE++++DC+GRP EV+QSN+E+TEED+T +V+   S S GSS  + F+FPGLRSDI+AIE
Sbjct: 61  TEQLIKDCVGRPSEVLQSNKEYTEEDITEQVLKGSS-SIGSSPSEMFSFPGLRSDIDAIE 120

Query: 121 HSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEP-------------- 180
             +F SM  FFDAAEE+RNGFFG+F  P ++ R+  + PS R+  P              
Sbjct: 121 KGIFSSMHRFFDAAEEMRNGFFGAFGTPNIYDRDSQAWPSTRRGIPVEGKPPKDASPKSD 180

[Close]
BLAST of CmoCh06G005440 vs. TAIR10
Match: AT2G35900.1 (AT2G35900.1 unknown protein)

HSP 1 Score: 148.7 bits (374), Expect = 3.5e-36
Identity = 86/200 (43.00%), Postives = 114/200 (57.00%), Query Frame = 1 

Query: 1   MGGVW-------RGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGK 60
           MG +W       +  +   D P GD          ++ + CST  VV+SQCKTEEVEPGK
Sbjct: 1   MGWIWIDDSSASKAGADLTDKPLGDSA--------AAAENCSTTTVVRSQCKTEEVEPGK 60

Query: 61  FVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGSSEYQPFNFPGLR 120
           FVRKC++TEEILR C G+P EV+QSN E TEEDVT+++V   +  +   +  P NFPGLR
Sbjct: 61  FVRKCDKTEEILRHCFGKPSEVVQSNTEHTEEDVTDQMVGRSALPNQFEDKNPLNFPGLR 120

Query: 121 SDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREP----SSSPSMRQNEPD-- 180
            D++AIE      MK FFDAAEE+ +  F    D    +R       + P + ++  D  
Sbjct: 121 RDVDAIERHFLSGMKSFFDAAEEMTSSLFDIMGDHHPSTRRGGIPIENHPKVEEHRNDET 180

[Close]
BLAST of CmoCh06G005440 vs. NCBI nr
Match: gi|659084564|ref|XP_008442953.1| (PREDICTED: uncharacterized protein LOC103486704 [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 3.4e-65
Identity = 137/195 (70.26%), Postives = 155/195 (79.49%), Query Frame = 1 

Query: 1   MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCER 60
           MG VW   +G+LDS A DG   +N +  SS DRCSTR VV+S CKTEEVEPGKFVRKCER
Sbjct: 1   MGWVWIDDTGDLDSSAVDGAKFDNSTYPSSSDRCSTRNVVRSHCKTEEVEPGKFVRKCER 60

Query: 61  TEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGSSEYQPFNFPGLRSDIEAIE 120
           TEEILRDCIGRP EVIQSN+EFTEEDVT+++V NRSF  GSSE++PF+FPGLRSDI+AIE
Sbjct: 61  TEEILRDCIGRPTEVIQSNKEFTEEDVTDQMV-NRSFPLGSSEHRPFDFPGLRSDIDAIE 120

Query: 121 HSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ---------------NE 180
            SLFGSMKGFF+AAEEI+NGFFGS RDPPLF+R+ SS  SMR+                E
Sbjct: 121 QSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNRDSSSPGSMRRGIPIEDHDPEFFSNPKE 180

[Close]
BLAST of CmoCh06G005440 vs. NCBI nr
Match: gi|449437498|ref|XP_004136529.1| (PREDICTED: uncharacterized protein LOC101211397 [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 2.3e-61
Identity = 134/198 (67.68%), Postives = 153/198 (77.27%), Query Frame = 1 

Query: 1   MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCER 60
           MG VWR  + + DS A D    NN ++ SS D CSTR VV+S CKTEEVEPGKFVRKCER
Sbjct: 1   MGWVWRDDTDDSDSFAADADKFNNSTSPSSSDWCSTRNVVRSHCKTEEVEPGKFVRKCER 60

Query: 61  TEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGS--SEYQPFNFPGLRSDIEA 120
           TEEILRDCIGRP EVI+SN+E TEEDVT+++V NRSFS GS  SE++P +FPGLRSDI+A
Sbjct: 61  TEEILRDCIGRPTEVIKSNKEITEEDVTDQMV-NRSFSLGSSPSEHRPLDFPGLRSDIDA 120

Query: 121 IEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ--------------- 180
           IE SLFGSMKGFF+AAEEI+NGFFGS RDPPLF+R+ SSS SMR+               
Sbjct: 121 IEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNRDSSSSASMRRGIPIEEDHDPVFFYN 180

[Close]
BLAST of CmoCh06G005440 vs. NCBI nr
Match: gi|703139374|ref|XP_010106964.1| (hypothetical protein L484_016892 [Morus notabilis])

HSP 1 Score: 196.4 bits (498), Expect = 4.2e-47
Identity = 114/216 (52.78%), Postives = 138/216 (63.89%), Query Frame = 1 

Query: 1   MGGVWRGA---SGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRK 60
           MG VWR      G   SPAG+     N +T S GDR STRKVV+SQCKTEEVEPG+FVRK
Sbjct: 1   MGWVWRNEPDDGGSEISPAGEFREVGNANTRSDGDRRSTRKVVRSQCKTEEVEPGRFVRK 60

Query: 61  CERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGSSE-------------- 120
           CERTEEILRDC+GRPVEV+QSN+E+TE+DVT++V+   SF +GSSE              
Sbjct: 61  CERTEEILRDCVGRPVEVVQSNKEYTEDDVTDQVLKG-SFPTGSSEGGALDFPGLHSDID 120

Query: 121 --YQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSM 180
              + FNFPGLR DI+ IE S FG +  FF+ AEE++N FF    DP +F  + SSS + 
Sbjct: 121 AIERSFNFPGLRGDIDTIERSFFGGLGRFFEVAEEMKNDFFRGLGDPHIFDGDSSSSSAS 180

[Close]
BLAST of CmoCh06G005440 vs. NCBI nr
Match: gi|595807540|ref|XP_007202625.1| (hypothetical protein PRUPE_ppa011952mg [Prunus persica])

HSP 1 Score: 196.4 bits (498), Expect = 4.2e-47
Identity = 114/197 (57.87%), Postives = 134/197 (68.02%), Query Frame = 1 

Query: 1   MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCER 60
           MG VWR    +  S AGD     NP   S G+RCSTRKV+K+QCKTEEVEPGKFVRKCE+
Sbjct: 1   MGWVWRDDEDDNKSTAGD----INPR--SVGERCSTRKVMKTQCKTEEVEPGKFVRKCEK 60

Query: 61  TEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGSSEYQPFNFPGLRSDIEAIE 120
           TE++LRDC GRPVEV+QSN+E+TE+DVT EV+   S   GSS++  F+FPGLRSDIE IE
Sbjct: 61  TEQLLRDCAGRPVEVVQSNKEYTEDDVTEEVLKG-SVYLGSSQHGAFDFPGLRSDIEDIE 120

Query: 121 HSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSS-PSMRQNEP------------- 180
            +  G +  FFDAAEE+RNGFF +F  P +F   PS S PS RQ  P             
Sbjct: 121 RTFMGGLSRFFDAAEEMRNGFFSAFGVPRIFDEGPSCSLPSKRQEVPIEGSQQEAFPKAN 180

[Close]
BLAST of CmoCh06G005440 vs. NCBI nr
Match: gi|702493853|ref|XP_010036583.1| (PREDICTED: uncharacterized protein LOC104425559 [Eucalyptus grandis])

HSP 1 Score: 188.7 bits (478), Expect = 8.7e-45
Identity = 110/203 (54.19%), Postives = 137/203 (67.49%), Query Frame = 1 

Query: 1   MGGVWR-----GASGELDSPAGDGVTSNNPSTWSS--GDRCSTRKVVKSQCKTEEVEPGK 60
           MG VWR     G  G  D PA  G+     S  S+  GDRCSTRKVVKS+C+TEEVEPGK
Sbjct: 1   MGWVWRDDGDGGGDGGGDPPASGGIAEYGGSGGSAGTGDRCSTRKVVKSRCRTEEVEPGK 60

Query: 61  FVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGSSEYQPFNFPGLR 120
           F+RKCERTEEILRDC+GRPVEV+QSN+E+TE+DVT +V+   SF +GSS++  F+ PGL 
Sbjct: 61  FIRKCERTEEILRDCVGRPVEVVQSNKEYTEDDVTEQVLRG-SFPAGSSDHGVFDLPGLH 120

Query: 121 SDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ---------- 180
           SDI+AI  + FG++  FF+AAEE++ G FG F  P L   + SS  SMRQ          
Sbjct: 121 SDIDAIGRNFFGNLDRFFEAAEEMKKGLFGMFDGPSLHDGD-SSWSSMRQGVPIEEPSPR 180

The following BLAST results are available for this feature:
BLAST of CmoCh06G005440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh06G005440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGU7_CUCSA1.6e-6167.68Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782830 PE=4 SV=1[more]
W9SK10_9ROSA2.9e-4752.78Uncharacterized protein OS=Morus notabilis GN=L484_016892 PE=4 SV=1[more]
M5VR87_PRUPE2.9e-4757.87Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011952mg PE=4 SV=1[more]
A0A059A3D5_EUCGR6.1e-4554.19Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01914 PE=4 SV=1[more]
A0A165YSC4_DAUCA1.3e-4450.77Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_013453 PE=4 SV=1[more]
BLAST of CmoCh06G005440 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G35900.13.5e-3643.00 unknown protein[more]
BLAST of CmoCh06G005440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659084564|ref|XP_008442953.1|3.4e-6570.26PREDICTED: uncharacterized protein LOC103486704 [Cucumis melo][more]
gi|449437498|ref|XP_004136529.1|2.3e-6167.68PREDICTED: uncharacterized protein LOC101211397 [Cucumis sativus][more]
gi|703139374|ref|XP_010106964.1|4.2e-4752.78hypothetical protein L484_016892 [Morus notabilis][more]
gi|595807540|ref|XP_007202625.1|4.2e-4757.87hypothetical protein PRUPE_ppa011952mg [Prunus persica][more]
gi|702493853|ref|XP_010036583.1|8.7e-4554.19PREDICTED: uncharacterized protein LOC104425559 [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G005440.1CmoCh06G005440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35722FAMILY NOT NAMEDcoord: 2..166
score: 3.4
NoneNo IPR availablePANTHERPTHR35722:SF1SUBFAMILY NOT NAMEDcoord: 2..166
score: 3.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G005440Cucsa.242100Cucumber (Gy14) v1cgycmoB0681
CmoCh06G005440CmaCh06G005420Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G005440Cla017600Watermelon (97103) v1cmowmB782
CmoCh06G005440Csa3G782830Cucumber (Chinese Long) v2cmocuB808
CmoCh06G005440MELO3C009564Melon (DHL92) v3.5.1cmomeB747
CmoCh06G005440ClCG10G018080Watermelon (Charleston Gray)cmowcgB729
CmoCh06G005440CSPI03G35860Wild cucumber (PI 183967)cmocpiB816
CmoCh06G005440Lsi03G017960Bottle gourd (USVL1VR-Ls)cmolsiB747
CmoCh06G005440Cp4.1LG08g09490Cucurbita pepo (Zucchini)cmocpeB797
CmoCh06G005440MELO3C009564.2Melon (DHL92) v3.6.1cmomedB849
CmoCh06G005440CsaV3_3G038210Cucumber (Chinese Long) v3cmocucB0954
CmoCh06G005440Cla97C10G201050Watermelon (97103) v2cmowmbB818
CmoCh06G005440Bhi11G002051Wax gourdcmowgoB0974
CmoCh06G005440CsGy3G033320Cucumber (Gy14) v2cgybcmoB402
CmoCh06G005440Carg16233Silver-seed gourdcarcmoB0933
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G005440Cucurbita maxima (Rimu)cmacmoB268
CmoCh06G005440Cucurbita pepo (Zucchini)cmocpeB774
CmoCh06G005440Cucurbita pepo (Zucchini)cmocpeB783
CmoCh06G005440Bottle gourd (USVL1VR-Ls)cmolsiB737
CmoCh06G005440Silver-seed gourdcarcmoB0351
CmoCh06G005440Silver-seed gourdcarcmoB1239
CmoCh06G005440Watermelon (97103) v2cmowmbB827
CmoCh06G005440Wax gourdcmowgoB1025
CmoCh06G005440Cucurbita moschata (Rifu)cmocmoB222