CmoCh06G005430 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G005430
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCmo_Chr06 : 2630157 .. 2633136 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTCGACTCTTATGAAGAAATTTCTCAAAGGGGTTAAACCAAATTCATGCTTATCTCCAATTCTTAGTGGTAATTATGTTGATTCTTTCCTGGAAAACAATCAGAGTAATCCAAGGTTAGAAGAAAGTACACAATCCTTGAACAATAAGTTCGTCTTAAACAACTCGGTCAAAGGTTTGGATAATGAAAATAACCTGAACTCAGAGGTAGAAATCTTCAAATGTTTGGCTATCCAGAAGGGATTTTCCCATACGGTCCAAACATATTATGTGACGATTCTCAAGCAGGGTTTGGATGGGAACGTTGAGGAAATGGATAGGACATGTCAAGATCTCGTGAAGGATGGGTGTCTGGGTGTTGAAGAAGTTATTGTCACTTTGGTTAATGCCTTTGTTAGACATGGTAGAACCAGAGAAGCACTTCGGGTACTTCCTCATGTAAACTTGGTTGGTTTAAAGCCTTCGATAGAGACATTTAACGTTGTATTGGCTGTTTTCGTTGAGGAGAACAGAGATATTGAAGAGGTTTTATTTGTTTACAAAGAGATGGTGAAAGCTAGCATTGTACCAAATGTTGACACATTAAATTTTCTGTTAGCTGCATTGTTTCATGCTGAACAAATCAAGACAGCCATGAACCAGTTTAGGAGAATGAGCAAGAAAGGATGCGTTCCTAACAGTAAAACCTTCGAGATTCTCTTAAATGGTCTAATTACACGAAATCTAGTGGATGAAGCTGTTTTAGCTTTGGGTATATTATACAAAATTGGGTGCGAACTCGATTTGAGCTTTTATACATGTGCAGTATCTTTATTTTGTAGGGTAGACAGAATAGATGTTGGAAGCTGGTTGTTTAGAATGATGAAAGCTTCCAATATTATACCAGATACCTTGATTTATAGTACTCTAATACAAAGTTTGTGCAAAAATCTATTATTAGATGAGGCATCATTTCTGCTCGAAGAGATGGTTGAAAGTGGTTTGATGCCTGAAGACAATGTATATGTTAGTATTATAAAAGTTTTTTTTGAGCTTGGGAAAACCGATGAGGCTATAAAGTTTGTGAAAGATAGATGTTTTTTGTTCACTTCTCCTCACAACGCATTGCTTGAAGGTTGCTGCAATGTTGGAAATATCTTAATAGCAAATCGTGTCTTAGGACAAATGTCGAAAATGAGTATTGATGATTGTAAATCTTGGAACATAGTTATTGGATGGTTGTGCAACAATGCAAGAATTGGAAAAGCTTTTGAATTCCTAGGTAAAATGATTGTGTTGTCATTTGTGCCTAACAAGGACACATATGCAGCTCTTATAATTGGAAATTGTAAATCCAGGAGGTACGAGGCTGCATTACAGTTAATGAACGAGGTACATGCTAGATGTTGGGTTCTTCATGCTGGATGTTATTCCGAGCTTATCGAAAGCCTTTGCCAAGCCAAAAGGACTCTTGAGGCTGCAGAAGTCTTTTGCTACATGTCTAAAAACAGATACCCTCTTCATCCTTCTTTATTTGATACATTGATCAAAGGGATATGTGATTTAGGACATATCGATGAAGCTTTAGTGCTGCTACAATTGGCATGTTATGCTGGTACTTCTTGTAAAACCGTGACGTATGCTTCTATCGTGTATGAGTTGTCTAAATCTAACAAGGCAGAGATTGCCTTACTAGTCTTATCACAGATGCTGGTGTTGGGCTATAGCCTTAATTTGGAGACATACTGCATTTTCATACATAGTTTTTGTGCCATGAATCGGGTAAAGGATTCTATAACGCTTTTCAACCGTATGGTCAATGAGGGCCTTCTACCTGATTCAGAAAGACTTCATGATTTATTGTTATGTATAGCTGATCATTCTCAGCTACATATGATTTTGACTACAATTGATAAACTTATTGCACATACTGACCTTGTAAATACTGCTACTTACAACTTGCTTATCAATGGGCTATGGAAAGAGGACAGAAAATATGAAGCATGTAAATTGTTGGACTCGATGTTGGAAAAGGGGTGGGTACCGGATGCTACGACTCATGGATTGCTGATTGGCTCTCTAGTTAATGAGAATTCGGTCATTGAGGATAATGTAAGCAGCATACTTGTTGAGGGCCTAGGGAATACATGAGAACCGACTTTCACAGGAGAATGCCATTTGATCCATCGACGATCGAAGGCCTGGGGTGCCATTTGATCGATTTATGGTTCACATGTATCATTAATGCTGGCCTCTTTGATTGTTTGACTGTAAAGACATTTCTCAAGCTTTCTCCTCAACACTTATCCCCCCTTATAAATGAGCAATGTCAAATGAGCAAATGGATACAACCGGATCCTCTCTCCACAAGCAGCAACAGAAAGAACAGTTTTGAATTAAAAGGTGAGTTTGATTTCTTCTTATTGTTTTTTGAGTAATATCTTAGTGTGTGGCTGATAAATGTAAGTGAAACTGGGTGTGGGTAGCTGATAAGTTAGCATATAAGCTAATGGTACATTTTCTCCCAAGTTCGCCGCCAGTATTAGCAACGAGATCCGCGAAAATTGCACCCTTTTATGCATTTTCCCTGGTGAACCTGGAATTTCTAGAAGAACTTTATTTGTTTGCCATATCTTCGCCAGGTGTTTATGGAATTATTATTGCGGGTTGGTCTAGTAATTAGGGGGCGGCCGTTCGGTCGCCTATGATACTAGGACCAATAGGTCAAAAATGGGTTTGTGCCGCAGGTGTTGAATGATCTACTCTACACAGGTGTGGGCTCATAAACCCTTTCTTTCATTCATCAATAGGGTCCTCGTCGGTCACTTTTCCGGACCAGGATCGATAAGTGGAAGTCATAAAAAAGCATGTTAGCTTAAAATACATACAATGGCTTAAATGTCATATCAATGTCACAGTTTTCTCTCTGATATTAACTCCAGAATTCTATGCTTCAGGGGCCATGGAGGGAAAGAAGCTATCGTGCAAGTTAAAGTAA

mRNA sequence

ATGCCGTCGACTCTTATGAAGAAATTTCTCAAAGGGGTTAAACCAAATTCATGCTTATCTCCAATTCTTAGTGGTAATTATGTTGATTCTTTCCTGGAAAACAATCAGAGTAATCCAAGGTTAGAAGAAAGTACACAATCCTTGAACAATAAGTTCGTCTTAAACAACTCGGTCAAAGGTTTGGATAATGAAAATAACCTGAACTCAGAGGTAGAAATCTTCAAATGTTTGGCTATCCAGAAGGGATTTTCCCATACGGTCCAAACATATTATGTGACGATTCTCAAGCAGGGTTTGGATGGGAACGTTGAGGAAATGGATAGGACATGTCAAGATCTCGTGAAGGATGGGTGTCTGGGTGTTGAAGAAGTTATTGTCACTTTGGTTAATGCCTTTGTTAGACATGGTAGAACCAGAGAAGCACTTCGGGTACTTCCTCATGTAAACTTGGTTGGTTTAAAGCCTTCGATAGAGACATTTAACGTTGTATTGGCTGTTTTCGTTGAGGAGAACAGAGATATTGAAGAGGTTTTATTTGTTTACAAAGAGATGGTGAAAGCTAGCATTGTACCAAATGTTGACACATTAAATTTTCTGTTAGCTGCATTGTTTCATGCTGAACAAATCAAGACAGCCATGAACCAGTTTAGGAGAATGAGCAAGAAAGGATGCGTTCCTAACAGTAAAACCTTCGAGATTCTCTTAAATGGTCTAATTACACGAAATCTAGTGGATGAAGCTGTTTTAGCTTTGGGTATATTATACAAAATTGGGTGCGAACTCGATTTGAGCTTTTATACATGTGCAGTATCTTTATTTTGTAGGGTAGACAGAATAGATGTTGGAAGCTGGTTGTTTAGAATGATGAAAGCTTCCAATATTATACCAGATACCTTGATTTATAGTACTCTAATACAAAGTTTGTGCAAAAATCTATTATTAGATGAGGCATCATTTCTGCTCGAAGAGATGGTTGAAAGTGGTTTGATGCCTGAAGACAATGTATATGTTAGTATTATAAAAGTTTTTTTTGAGCTTGGGAAAACCGATGAGGCTATAAAGTTTGTGAAAGATAGATGTTTTTTGTTCACTTCTCCTCACAACGCATTGCTTGAAGGTTGCTGCAATGTTGGAAATATCTTAATAGCAAATCGTGTCTTAGGACAAATGTCGAAAATGAGTATTGATGATTGTAAATCTTGGAACATAGTTATTGGATGGTTGTGCAACAATGCAAGAATTGGAAAAGCTTTTGAATTCCTAGGTAAAATGATTGTGTTGTCATTTGTGCCTAACAAGGACACATATGCAGCTCTTATAATTGGAAATTGTAAATCCAGGAGGTACGAGGCTGCATTACAGTTAATGAACGAGGTACATGCTAGATGTTGGGTTCTTCATGCTGGATGTTATTCCGAGCTTATCGAAAGCCTTTGCCAAGCCAAAAGGACTCTTGAGGCTGCAGAAGTCTTTTGCTACATGTCTAAAAACAGATACCCTCTTCATCCTTCTTTATTTGATACATTGATCAAAGGGATATGTGATTTAGGACATATCGATGAAGCTTTAGTGCTGCTACAATTGGCATGTTATGCTGGTACTTCTTGTAAAACCGTGACGTATGCTTCTATCGTGTATGAGTTGTCTAAATCTAACAAGGCAGAGATTGCCTTACTAGTCTTATCACAGATGCTGGTGTTGGGCTATAGCCTTAATTTGGAGACATACTGCATTTTCATACATAGTTTTTGTGCCATGAATCGGGTAAAGGATTCTATAACGCTTTTCAACCGTATGGTCAATGAGGGCCTTCTACCTGATTCAGAAAGACTTCATGATTTATTGTTATGTATAGCTGATCATTCTCAGCTACATATGATTTTGACTACAATTGATAAACTTATTGCACATACTGACCTTGTAAATACTGCTACTTACAACTTGCTTATCAATGGGCTATGGAAAGAGGACAGAAAATATGAAGCATGTAAATTGTTGGACTCGATGTTGGAAAAGGGGTGGGTACCGGATGCTACGACTCATGGATTGCTGATTGGCTCTCTAGTTAATGAGAATTCGGTCATTGAGGATAATACATTTCTCAAGCTTTCTCCTCAACACTTATCCCCCCTTATAAATGAGCAATGTCAAATGAGCAAATGGATACAACCGGATCCTCTCTCCACAAGCAGCAACAGAAAGAACAGTTTTGAATTAAAAGGGGCCATGGAGGGAAAGAAGCTATCGTGCAAGTTAAAGTAA

Coding sequence (CDS)

ATGCCGTCGACTCTTATGAAGAAATTTCTCAAAGGGGTTAAACCAAATTCATGCTTATCTCCAATTCTTAGTGGTAATTATGTTGATTCTTTCCTGGAAAACAATCAGAGTAATCCAAGGTTAGAAGAAAGTACACAATCCTTGAACAATAAGTTCGTCTTAAACAACTCGGTCAAAGGTTTGGATAATGAAAATAACCTGAACTCAGAGGTAGAAATCTTCAAATGTTTGGCTATCCAGAAGGGATTTTCCCATACGGTCCAAACATATTATGTGACGATTCTCAAGCAGGGTTTGGATGGGAACGTTGAGGAAATGGATAGGACATGTCAAGATCTCGTGAAGGATGGGTGTCTGGGTGTTGAAGAAGTTATTGTCACTTTGGTTAATGCCTTTGTTAGACATGGTAGAACCAGAGAAGCACTTCGGGTACTTCCTCATGTAAACTTGGTTGGTTTAAAGCCTTCGATAGAGACATTTAACGTTGTATTGGCTGTTTTCGTTGAGGAGAACAGAGATATTGAAGAGGTTTTATTTGTTTACAAAGAGATGGTGAAAGCTAGCATTGTACCAAATGTTGACACATTAAATTTTCTGTTAGCTGCATTGTTTCATGCTGAACAAATCAAGACAGCCATGAACCAGTTTAGGAGAATGAGCAAGAAAGGATGCGTTCCTAACAGTAAAACCTTCGAGATTCTCTTAAATGGTCTAATTACACGAAATCTAGTGGATGAAGCTGTTTTAGCTTTGGGTATATTATACAAAATTGGGTGCGAACTCGATTTGAGCTTTTATACATGTGCAGTATCTTTATTTTGTAGGGTAGACAGAATAGATGTTGGAAGCTGGTTGTTTAGAATGATGAAAGCTTCCAATATTATACCAGATACCTTGATTTATAGTACTCTAATACAAAGTTTGTGCAAAAATCTATTATTAGATGAGGCATCATTTCTGCTCGAAGAGATGGTTGAAAGTGGTTTGATGCCTGAAGACAATGTATATGTTAGTATTATAAAAGTTTTTTTTGAGCTTGGGAAAACCGATGAGGCTATAAAGTTTGTGAAAGATAGATGTTTTTTGTTCACTTCTCCTCACAACGCATTGCTTGAAGGTTGCTGCAATGTTGGAAATATCTTAATAGCAAATCGTGTCTTAGGACAAATGTCGAAAATGAGTATTGATGATTGTAAATCTTGGAACATAGTTATTGGATGGTTGTGCAACAATGCAAGAATTGGAAAAGCTTTTGAATTCCTAGGTAAAATGATTGTGTTGTCATTTGTGCCTAACAAGGACACATATGCAGCTCTTATAATTGGAAATTGTAAATCCAGGAGGTACGAGGCTGCATTACAGTTAATGAACGAGGTACATGCTAGATGTTGGGTTCTTCATGCTGGATGTTATTCCGAGCTTATCGAAAGCCTTTGCCAAGCCAAAAGGACTCTTGAGGCTGCAGAAGTCTTTTGCTACATGTCTAAAAACAGATACCCTCTTCATCCTTCTTTATTTGATACATTGATCAAAGGGATATGTGATTTAGGACATATCGATGAAGCTTTAGTGCTGCTACAATTGGCATGTTATGCTGGTACTTCTTGTAAAACCGTGACGTATGCTTCTATCGTGTATGAGTTGTCTAAATCTAACAAGGCAGAGATTGCCTTACTAGTCTTATCACAGATGCTGGTGTTGGGCTATAGCCTTAATTTGGAGACATACTGCATTTTCATACATAGTTTTTGTGCCATGAATCGGGTAAAGGATTCTATAACGCTTTTCAACCGTATGGTCAATGAGGGCCTTCTACCTGATTCAGAAAGACTTCATGATTTATTGTTATGTATAGCTGATCATTCTCAGCTACATATGATTTTGACTACAATTGATAAACTTATTGCACATACTGACCTTGTAAATACTGCTACTTACAACTTGCTTATCAATGGGCTATGGAAAGAGGACAGAAAATATGAAGCATGTAAATTGTTGGACTCGATGTTGGAAAAGGGGTGGGTACCGGATGCTACGACTCATGGATTGCTGATTGGCTCTCTAGTTAATGAGAATTCGGTCATTGAGGATAATACATTTCTCAAGCTTTCTCCTCAACACTTATCCCCCCTTATAAATGAGCAATGTCAAATGAGCAAATGGATACAACCGGATCCTCTCTCCACAAGCAGCAACAGAAAGAACAGTTTTGAATTAAAAGGGGCCATGGAGGGAAAGAAGCTATCGTGCAAGTTAAAGTAA
Homology
[Close]
BLAST of CmoCh06G005430 vs. Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 3.9e-54
Identity = 158/636 (24.84%), Postives = 297/636 (46.70%), Query Frame = 1 

Query: 66  NLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGCLGVEEVI 125
           N+++ +E+F     Q G+ H+   Y V I K G +G  + +DR    +  +G +  E + 
Sbjct: 90  NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149

Query: 126 VTLVNAFVRHGRTREALRVLPHV-NLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEM 185
           ++++  + + G   +  R++  + N+   +P+ +++NVVL + V  N   +    V+ +M
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCH-KVAANVFYDM 209

Query: 186 VKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGLITRNLV 245
           +   I P + T   ++ A     +I +A++  R M+K GCVPNS  ++ L++ L   N V
Sbjct: 210 LSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 269

Query: 246 DEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTL 305
           +EA+  L  ++ +GC  D   +   +   C+ DRI+  + +   M      PD + Y  L
Sbjct: 270 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 329

Query: 306 IQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKDRCFLF- 365
           +  LCK   +D A  L   + +    PE  ++ ++I  F   G+ D+A   + D    + 
Sbjct: 330 MNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 389

Query: 366 ----TSPHNALLEGCCNVGNILIANRVLGQM-SKMSIDDCKSWNIVIGWLCNNARIGKAF 425
                  +N+L+ G    G + +A  VL  M +K    +  S+ I++   C   +I +A+
Sbjct: 390 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 449

Query: 426 EFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESL 485
             L +M      PN   +  LI   CK  R   A+++  E+  +        ++ LI  L
Sbjct: 450 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 509

Query: 486 CQAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKT 545
           C+      A  +   M       +   ++TLI      G I EA  L+    + G+    
Sbjct: 510 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 569

Query: 546 VTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNR 605
           +TY S++  L ++ + + A  +  +ML  G++ +  +  I I+  C    V++++     
Sbjct: 570 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 629

Query: 606 MVNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWKEDR 665
           MV  G  PD    + L+  +    ++   LT   KL A     +T T+N L++ L K   
Sbjct: 630 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 689

Query: 666 KYEACKLLDSMLEKGWVPDATTHGLLIGSLVNENSV 695
            Y+AC LLD  +E G+VP+  T  +L+ S++ + ++
Sbjct: 690 VYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720

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BLAST of CmoCh06G005430 vs. Swiss-Prot
Match: PPR99_ARATH (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-44
Identity = 128/470 (27.23%), Postives = 224/470 (47.66%), Query Frame = 1 

Query: 151 VGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIK 210
           +G+  ++ T+++++  F   ++ +   L V  +M+K    P++ TLN LL    H  +I 
Sbjct: 110 LGISHNLYTYSILINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 169

Query: 211 TAMNQFRRMSKKGCVPNSKTFEILLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAV 270
            A++   +M + G  P+S TF  L++GL   N   EAV  +  +   GC+ DL  Y   V
Sbjct: 170 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 229

Query: 271 SLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDEASFLLEEMVESGLM 330
           +  C+   ID+   L + M+   I P  +IY+T+I +LC    +++A  L  EM   G+ 
Sbjct: 230 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 289

Query: 331 PEDNVYVSIIKVFFELGKTDEAIKFVKDRCFLFTSPH----NALLEGCCNVGNILIANRV 390
           P    Y S+I+     G+  +A + + D      +P+    +AL++     G ++ A ++
Sbjct: 290 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 349

Query: 391 LGQMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCK 450
             +M K SID D  +++ +I   C + R+ +A      MI     PN  TY  LI G CK
Sbjct: 350 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 409

Query: 451 SRRYEAALQLMNEVHARCWVLHAGCYSELIESLCQAKRTLEAAEVFCYMSKNRYPLHPSL 510
           ++R +  ++L  E+  R  V +   Y+ LI    QA+    A  VF  M  +        
Sbjct: 410 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 469

Query: 511 FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTVTYASIVYELSKSNKAEIALLVLSQML 570
           +  L+ G+C+ G ++ ALV+ +    +       TY  ++  + K+ K E    +   + 
Sbjct: 470 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 529

Query: 571 VLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDSERLHDLL 616
           + G   N+ TY   +  FC     +++  LF  M  EG LPDS   + L+
Sbjct: 530 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578

[Close]
BLAST of CmoCh06G005430 vs. Swiss-Prot
Match: PP101_ARATH (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 180.6 bits (457), Expect = 6.2e-44
Identity = 128/470 (27.23%), Postives = 226/470 (48.09%), Query Frame = 1 

Query: 151 VGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIK 210
           +G+  ++ T+N+++  F   ++ I   L +  +M+K    P++ TL+ LL    H ++I 
Sbjct: 39  LGISHNLYTYNILINCFCRRSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 98

Query: 211 TAMNQFRRMSKKGCVPNSKTFEILLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAV 270
            A+    +M + G  P++ TF  L++GL   N   EAV  +  + + GC+ +L  Y   V
Sbjct: 99  DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 158

Query: 271 SLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDEASFLLEEMVESGLM 330
           +  C+   ID+   L   M+A+ I  D +I++T+I SLCK   +D+A  L +EM   G+ 
Sbjct: 159 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 218

Query: 331 PEDNVYVSIIKVFFELGKTDEAIKFVKDRCFLFTSPH----NALLEGCCNVGNILIANRV 390
           P    Y S+I      G+  +A + + D      +P+    NAL++     G  + A ++
Sbjct: 219 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 278

Query: 391 LGQMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCK 450
              M K SID D  ++N +I   C + R+ KA +    M+     P+ DTY  LI G CK
Sbjct: 279 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 338

Query: 451 SRRYEAALQLMNEVHARCWVLHAGCYSELIESLCQAKRTLEAAEVFCYMSKNRYPLHPSL 510
           S+R E   +L  E+  R  V     Y+ LI+ L        A +VF  M  +  P     
Sbjct: 339 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 398

Query: 511 FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTVTYASIVYELSKSNKAEIALLVLSQML 570
           +  L+ G+C+ G +++AL +      +        Y +++  + K+ K +    +   + 
Sbjct: 399 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 458

Query: 571 VLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDSERLHDLL 616
           + G   N+ TY   I   C+   ++++  L  +M  +G LPDS   + L+
Sbjct: 459 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507

[Close]
BLAST of CmoCh06G005430 vs. Swiss-Prot
Match: PPR94_ARATH (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.4e-43
Identity = 130/495 (26.26%), Postives = 239/495 (48.28%), Query Frame = 1 

Query: 128 LVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKA 187
           L++A  +  +    + +   +  +G+   + T+++ +  F   ++ +   L V  +M+K 
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ-LSLALAVLAKMMKL 148

Query: 188 SIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGLITRNLVDEA 247
              P++ TL+ LL    H+++I  A+    +M + G  P++ TF  L++GL   N   EA
Sbjct: 149 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 208

Query: 248 VLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQS 307
           V  +  + + GC+ DL  Y   V+  C+   ID+   L + M+   I  D +IY+T+I  
Sbjct: 209 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 268

Query: 308 LCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKDRCFLFTSPH 367
           LCK   +D+A  L  EM   G+ P+   Y S+I      G+  +A + + D      +P+
Sbjct: 269 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 328

Query: 368 ----NALLEGCCNVGNILIANRVLGQMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLG 427
               +AL++     G ++ A ++  +M K SID D  +++ +I   C + R+ +A     
Sbjct: 329 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 388

Query: 428 KMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESLCQAK 487
            MI     PN  TY+ LI G CK++R E  ++L  E+  R  V +   Y+ LI    QA+
Sbjct: 389 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 448

Query: 488 RTLEAAEVFCYMSKNRYPLHPSL--FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTVT 547
               A  VF  M      +HP++  ++ L+ G+C  G + +A+V+ +    +       T
Sbjct: 449 DCDNAQMVFKQMVS--VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 508

Query: 548 YASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMV 607
           Y  ++  + K+ K E    +   + + G S N+  Y   I  FC     +++ +L  +M 
Sbjct: 509 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 568

Query: 608 NEGLLPDSERLHDLL 616
            +G LP+S   + L+
Sbjct: 569 EDGPLPNSGTYNTLI 580

[Close]
BLAST of CmoCh06G005430 vs. Swiss-Prot
Match: PP100_ARATH (Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 8.9e-43
Identity = 128/493 (25.96%), Postives = 236/493 (47.87%), Query Frame = 1 

Query: 128 LVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKA 187
           L++A  +  +    + +   +  +G+   + T+++ +  F   ++ +   L V  +M+K 
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ-LSLALAVLAKMMKL 148

Query: 188 SIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGLITRNLVDEA 247
              P++ TL+ LL    H+++I  A+    +M + G  P++ TF  L++GL   N   EA
Sbjct: 149 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 208

Query: 248 VLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQS 307
           V  +  + + GC+ DL  Y   V+  C+   ID+   L   M+A+ I  + +I++T+I S
Sbjct: 209 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 268

Query: 308 LCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKDRCFLFTSPH 367
           LCK   ++ A  L  EM   G+ P    Y S+I      G+  +A + + +      +P+
Sbjct: 269 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 328

Query: 368 ----NALLEGCCNVGNILIANRVLGQMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLG 427
               NAL++     G ++ A ++  +M + SID D  ++N++I   C + R+ +A +   
Sbjct: 329 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 388

Query: 428 KMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESLCQAK 487
            M+    +PN  TY  LI G CK +R E  ++L  E+  R  V +   Y+ +I+   QA 
Sbjct: 389 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 448

Query: 488 RTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKTVTYA 547
               A  VF  M  NR P     +  L+ G+C  G +D ALV+ +    +        Y 
Sbjct: 449 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 508

Query: 548 SIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNE 607
           +++  + K+ K   A  +      L    ++ TY   I   C+   ++++  LF +M  +
Sbjct: 509 TMIEGMCKAGKVGEAWDLFCS---LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 568

Query: 608 GLLPDSERLHDLL 616
           G LP+S   + L+
Sbjct: 569 GTLPNSGTYNTLI 577

[Close]
BLAST of CmoCh06G005430 vs. TrEMBL
Match: A0A0A0LE83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782810 PE=4 SV=1)

HSP 1 Score: 1157.1 bits (2992), Expect = 0.0e+00
Identity = 581/711 (81.72%), Postives = 643/711 (90.44%), Query Frame = 1 

Query: 1   MPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEESTQSLNNKFVLNNSV-- 60
           MPSTLMKKFLKGV PNSCLSPILSG +VD+FLENNQ+ PRL++STQ L++K V NNSV  
Sbjct: 6   MPSTLMKKFLKGVVPNSCLSPILSGIHVDTFLENNQNCPRLKQSTQFLSDKSVSNNSVNS 65

Query: 61  -KGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDG 120
            KGLD + NLNSEVEIFK LAIQKG   +VQTYY TILK GLDGN+EEM+ TC+DLV +G
Sbjct: 66  VKGLDYDKNLNSEVEIFKSLAIQKGIFQSVQTYYETILKLGLDGNIEEMEMTCRDLVNEG 125

Query: 121 CLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEV 180
           C GVEEVIVTLVN  VR GR REALRVLPH++LVGL+PS+ETFNVVLAV VEE+RDI+EV
Sbjct: 126 CSGVEEVIVTLVNTLVRRGRVREALRVLPHISLVGLRPSVETFNVVLAVLVEEDRDIQEV 185

Query: 181 LFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNG 240
           LFVYKEMVKA IVPNVDTLNFLLAALFHAEQIKTAMNQFRRM KKGC PNSKTFE+L+NG
Sbjct: 186 LFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFEVLVNG 245

Query: 241 LITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPD 300
           LIT+NLVDEAVL LGI+YKI CEL LSFYTCA+SLFCR DRIDVGSWLF MMKASNI+P 
Sbjct: 246 LITKNLVDEAVLVLGIMYKIRCELHLSFYTCAISLFCREDRIDVGSWLFTMMKASNIVPG 305

Query: 301 TLIYSTLIQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVK 360
           TLIYSTLIQSLCK+L LD+A FLLEEMVE+GL+PE++VYVSI++VFFELGKTDEAIKFV+
Sbjct: 306 TLIYSTLIQSLCKSLSLDKALFLLEEMVENGLIPEESVYVSIVEVFFELGKTDEAIKFVE 365

Query: 361 DRCFLFTSPHNALLEGCCNVGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIGKA 420
           DRC  +TSPHNALLEGC N G IL+AN +LG+MSKM+IDDCKSWNIVIGWLCNNA+IG A
Sbjct: 366 DRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNAKIGNA 425

Query: 421 FEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIES 480
           FEFLGKMIVLSFVPN+DTYAALI+GNCKSRRYEAALQLMNEVH+RCW+L+AGCYSELIE 
Sbjct: 426 FEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEAALQLMNEVHSRCWILNAGCYSELIEG 485

Query: 481 LCQAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCK 540
           LCQA RTLEAAEVFC+MSKNR+PLHPSLFDTLIKG+CDLGH+DEALVLLQLA YAGTSCK
Sbjct: 486 LCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKGMCDLGHVDEALVLLQLASYAGTSCK 545

Query: 541 TVTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFN 600
           +VTYASI++ELSKSNKAE ALLVLSQMLVLG +L+LETY I IHSF ++NRVK+SI LFN
Sbjct: 546 SVTYASIIHELSKSNKAETALLVLSQMLVLGCNLDLETYYILIHSFSSINRVKESILLFN 605

Query: 601 RMVNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWKED 660
            MVNE LLPDSERL+DL LCIA+HSQLHMI TTIDKL+ HTDLVNTATYNLLINGLWKED
Sbjct: 606 HMVNEALLPDSERLYDLFLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLINGLWKED 665

Query: 661 RKYEACKLLDSMLEKGWVPDATTHGLLIGS----------LVNENSVIEDN 699
           RKYEACKLLDSMLEKGWVPDATTHGLLIGS          L++ENS IEDN
Sbjct: 666 RKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDKVLISENSAIEDN 716

[Close]
BLAST of CmoCh06G005430 vs. TrEMBL
Match: M5WJY3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002033mg PE=4 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 1.4e-196
Identity = 355/693 (51.23%), Postives = 486/693 (70.13%), Query Frame = 1 

Query: 2   PSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPR---LEESTQSLNNKFVLNNSV 61
           P T  K+    V   +C+S       V+ F   NQ  P     E++ QSL NK V +N +
Sbjct: 4   PLTFSKRIPFWVCSGACISSASCAKTVECFPGKNQDPPNSSDFEQNIQSLRNKLVPDNLI 63

Query: 62  KGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGC 121
           + LDN ++L+S V++FK  ++Q+ F+HT  TYY  ILK GL G VEEM+  CQ++VKD C
Sbjct: 64  RVLDNTDDLSSAVKVFKWASLQRRFNHTADTYYRIILKLGLAGKVEEMEGFCQNMVKDKC 123

Query: 122 LGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVL 181
            GVEE ++ LV+ FV+H R  EA+RVL ++   G +PSIETFN VL   VE+ RD ++VL
Sbjct: 124 PGVEEALLALVDMFVKHCRQSEAIRVLVNMKAGGYRPSIETFNAVLGALVEDKRDFQDVL 183

Query: 182 FVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGL 241
           FVYKEMV A I+P ++TLN+LL AL   + I++A+ Q+RRM KKGC PN +TFEIL+   
Sbjct: 184 FVYKEMVTAGILPTIETLNYLLEALLETDHIESALGQYRRMKKKGCSPNCRTFEILIKAH 243

Query: 242 ITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDT 301
           I +  VDEAV+ L  + ++GC+ DLSFY+  + LFC+ +R + G  LF MM+ASN +PD+
Sbjct: 244 IAKGRVDEAVIVLSEMLELGCQPDLSFYSTLIPLFCQNNRPEEGIRLFEMMRASNFMPDS 303

Query: 302 LIYSTLIQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKD 361
           LI   L+Q LCKNL L++A  +LE+M+E+GL P ++V+  ++ VF +LGK D+A+KF++D
Sbjct: 304 LICGVLLQCLCKNLCLNDAIKVLEDMMETGLTPANDVFADVVNVFCKLGKIDDAMKFLED 363

Query: 362 RCFLFTSPHNALLEGCCNVGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIGKAF 421
           +  L TS  N LLEGCC+ G  L+A  +L +MS+  + DC SWNI+I WLC N+RI  A 
Sbjct: 364 KHILETSVCNVLLEGCCSAGKFLMAKDLLVKMSESDVADCNSWNILIRWLCENSRIRVAS 423

Query: 422 EFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESL 481
           E LG+M+V S +P+  TY+AL+IGNCK   Y  AL L + + A+ WVL    YSEL++ L
Sbjct: 424 EILGRMVVSSSLPDCATYSALVIGNCKMSNYRNALDLFHHIRAKSWVLDPTSYSELVKGL 483

Query: 482 CQAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKT 541
           C  + T EA EVFCYMS NR  +  S F+ LIKG+C+ G +DEA+ L +LA Y+GTS  +
Sbjct: 484 CLVEMTHEATEVFCYMSSNRCSIQSSSFNMLIKGVCETGKVDEAIRLQKLAYYSGTSSTS 543

Query: 542 VTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNR 601
            TY++I++ LSK + A+  L+VLS+MLV G +L+L+ YCI I S    NRVK+ I LF  
Sbjct: 544 STYSAIMFGLSKVDNAKDLLVVLSKMLVEGCNLDLDAYCILIQSMSLQNRVKECILLFRM 603

Query: 602 MVNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWKEDR 661
           MVN+GL+PDSERL +LL CIA+ SQLH+I  +IDKL + ++ +N+A YN+LINGLWKE  
Sbjct: 604 MVNKGLIPDSERLFNLLSCIANLSQLHVISDSIDKLASSSEALNSAIYNVLINGLWKEGY 663

Query: 662 KYEACKLLDSMLEKGWVPDATTHGLLIGSLVNE 692
           K+EAC+LLD MLEKGWVPDA THGLLIGS V+E
Sbjct: 664 KHEACRLLDIMLEKGWVPDAKTHGLLIGSAVSE 696

[Close]
BLAST of CmoCh06G005430 vs. TrEMBL
Match: B9N416_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s00500g PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 5.6e-193
Identity = 347/689 (50.36%), Postives = 478/689 (69.38%), Query Frame = 1 

Query: 2   PSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEE---STQSLNNKFVLNNSV 61
           PST +K+  K V   + +S +   N +    E NQ+ P   +     QSL NK   +N +
Sbjct: 4   PSTFLKRIPKWVNLKAFISSVSCTNTIQINPEINQNTPNFPDFDVKIQSLRNKLYPDNLI 63

Query: 62  KGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGC 121
           K L + +++NS V+IFK  A+Q+ F+HT  TYY  I K G+ GNVEEM+  CQ++VK+ C
Sbjct: 64  KVLKSTSDVNSAVKIFKWAALQRKFNHTADTYYWIIFKLGMAGNVEEMEGFCQNMVKERC 123

Query: 122 LGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVL 181
            G E+V+V+LV+AFVR+ R  EA+RVL ++NL G+KPSI+ FN VL   VEE R  ++V+
Sbjct: 124 TGEEDVLVSLVDAFVRNCRLNEAMRVLFNMNLAGIKPSIDVFNFVLGALVEEKRGFQDVV 183

Query: 182 FVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGL 241
           FVYKEMVKA + P++DTLN+LL  LF  +++ +A++Q+RR++KKGC P+ KTFEI++ GL
Sbjct: 184 FVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKGCRPDGKTFEIVIKGL 243

Query: 242 ITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDT 301
           I  + VD++V  L  + ++GC  +LSFY   + LFCR DR++ G  LFR MK SN  PD+
Sbjct: 244 IANDRVDDSVSILHEMLELGCLPELSFYRTTIPLFCREDRLEEGIRLFRKMKESNFTPDS 303

Query: 302 LIYSTLIQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKD 361
            IY  LIQ LCK L LDEA  LLEEM+ES L  ++NV+V ++  F +LGK +EA+K ++D
Sbjct: 304 FIYGALIQCLCKQLRLDEAVNLLEEMMESQLEGDNNVFVDVVNGFCKLGKINEAVKLLED 363

Query: 362 RCFLFTSPHNALLEGCCNVGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIGKAF 421
           +  L TSPHNALL  CC+    L+A  +L +MS+ +IDDC SWNI+I WLC    + KA+
Sbjct: 364 KHVLETSPHNALLRCCCDADKFLMAKGLLEKMSERNIDDCDSWNILIRWLCEREEMVKAY 423

Query: 422 EFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESL 481
           E LG+MI+ S +P+  TY+AL+ GNC+  +YE ALQL  ++HA+CW+L    YSELIE L
Sbjct: 424 ELLGRMIISSLIPDYATYSALVAGNCRLSKYEDALQLFLQLHAKCWILDPASYSELIEGL 483

Query: 482 CQAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKT 541
           C+ ++ LEA +VFCYMS+NR  L    F  LIKGICD+G I EA+ L  LA  +GTSC  
Sbjct: 484 CRGEKYLEAVKVFCYMSENRCSLQSLPFIMLIKGICDMGMIGEAVRLQSLAYNSGTSCVN 543

Query: 542 VTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNR 601
            TY  ++  LSKS +    L  LS+MLV G +LN E YCI I S  A NR+KD     N 
Sbjct: 544 ATYNYVMLRLSKSEQGRHVLAFLSRMLVQGGNLNTEAYCILIQSLIAQNRIKDCSMFLNV 603

Query: 602 MVNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWKEDR 661
           M+N+GL+PDS+ L++LL C+A HSQL++I  ++DKL +  +++++A YN+LING+WKE  
Sbjct: 604 MINKGLVPDSDTLYNLLSCLAKHSQLYLISVSLDKLASDCEVLDSAMYNILINGMWKEGN 663

Query: 662 KYEACKLLDSMLEKGWVPDATTHGLLIGS 688
           K +A +LLD MLEKGWVPDA THGLLIGS
Sbjct: 664 KNDARRLLDLMLEKGWVPDAMTHGLLIGS 692

[Close]
BLAST of CmoCh06G005430 vs. TrEMBL
Match: A0A067JKK4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23171 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 3.7e-189
Identity = 340/692 (49.13%), Postives = 477/692 (68.93%), Query Frame = 1 

Query: 17  SCLSPILSGNYVDSFLENNQSNPRLEESTQSLNNKFVLNNSVKGLDNENNLNSEVEIFKC 76
           SC + I     +D  +EN+      E   Q L +K   ++ +K L + N+++S V+IFK 
Sbjct: 25  SCTNSIQINPEIDQSIENSLD---FEAKIQFLRDKLYPDSLIKVLKSTNDISSAVKIFKW 84

Query: 77  LAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGCLGVEEVIVTLVNAFVRHG 136
            ++QK F+HT  TYY  ILK G+ GNV E++  CQ+LV+DG  GV+ V+V L+ +FVRH 
Sbjct: 85  ASLQKRFNHTADTYYWIILKLGMAGNVGEVEGFCQNLVRDGSPGVDYVLVLLIESFVRHR 144

Query: 137 RTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTL 196
           R  EA+ +L ++NL G KPSI  FNV+L   VEE R  +EV+FVYKEMVKA + PNVDTL
Sbjct: 145 RLNEAICILVNMNLGGYKPSINIFNVILGALVEERRGFQEVVFVYKEMVKARVAPNVDTL 204

Query: 197 NFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGLITRNLVDEAVLALGILYK 256
           N+LL  LF  +++ +A++Q+RR++KKGC PN KTFEI++ GLI    VD+A++ L  + K
Sbjct: 205 NYLLEILFEIDKVSSALDQYRRINKKGCSPNCKTFEIVIKGLILNKQVDDAIIILDEMQK 264

Query: 257 IGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDE 316
           +GC  +L+FYTC + LFCR ++++    LFRMM+ SN++P++ IY  LIQ LCKNL LD+
Sbjct: 265 VGCLPELNFYTCIIPLFCRENKLEEAIRLFRMMQTSNLVPNSFIYEALIQCLCKNLQLDD 324

Query: 317 ASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKDRCFLFTSPHNALLEGCCN 376
              LL++MV++ L P+ NV V I+  F  LGK D+A+KF++D+  L TSPHNALLEGCC+
Sbjct: 325 VLTLLDKMVQNCLTPDKNVLVDIVNGFCRLGKIDKAVKFLEDKLILETSPHNALLEGCCD 384

Query: 377 VGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTY 436
            G   +A   L +MSK ++ DC SWNI+I WLC  A + KA E LG+MIV S VPN  TY
Sbjct: 385 AGRFFLAKDQLEKMSKRTVADCDSWNILIRWLCKKADVKKAHELLGRMIVSSLVPNCATY 444

Query: 437 AALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESLCQAKRTLEAAEVFCYMSK 496
           +AL+IG C+  ++E ALQL  ++ A+ WVL +  YS+LIE LC+ ++ LEA EVF YM  
Sbjct: 445 SALVIGLCRLSKFEDALQLFLQLQAKSWVLDSLSYSDLIEGLCRVEKYLEATEVFHYMFS 504

Query: 497 NRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKTVTYASIVYELSKSNKAEI 556
           NR PL    F  L+KGIC+ G ++EA+ LLQ+A  +G SC   TY +I+  LSK+++   
Sbjct: 505 NRCPLQSFSFSLLVKGICNKGMVNEAVSLLQMAFDSGISCDNATYNNIMLGLSKTDEGRN 564

Query: 557 ALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDSERLHDLLL 616
            L+ LSQMLV G +L+ E YCI I S  A N++KD   +FN M+NEGL+PDS+ LH++L 
Sbjct: 565 LLVFLSQMLVKGCNLDAEAYCILIKSMIARNQIKDCALIFNTMINEGLVPDSDMLHNMLS 624

Query: 617 CIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWKEDRKYEACKLLDSMLEKGWVP 676
           C A+HS+LH+I ++ID+L+ +++++++  YN+L+ GLWKE  K  A +LLD MLEKGW+P
Sbjct: 625 CFANHSKLHLISSSIDRLVPNSEVLDSTMYNMLVKGLWKEGNKNGARQLLDLMLEKGWIP 684

Query: 677 DATTHGLLIGS----------LVNENSVIEDN 699
           DATTH LLIGS          L  EN  I+DN
Sbjct: 685 DATTHRLLIGSVDRVESGEKMLTYENFTIKDN 713

[Close]
BLAST of CmoCh06G005430 vs. TrEMBL
Match: B9I6D0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s00430g PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 1.9e-188
Identity = 341/689 (49.49%), Postives = 478/689 (69.38%), Query Frame = 1 

Query: 2   PSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEE---STQSLNNKFVLNNSV 61
           PSTL K   K +   S +S +   N +    E NQ+ P + +     QSL NK   +  +
Sbjct: 4   PSTLSKTIPKWLNLKSFISSVSCTNAIQINPEINQNAPNITDFDAKIQSLRNKLCPDYLI 63

Query: 62  KGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGC 121
           K L + +++NS V++FK  ++Q+ F+HT  TYY  I K G+  NVEEM+  CQ++VKD C
Sbjct: 64  KVLKSTSDINSAVKLFKWASLQRRFNHTDDTYYWIIFKLGMAENVEEMEGFCQNMVKDRC 123

Query: 122 LGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVL 181
            GVE+V+++LV+AFVR+ R  EALRVL ++NL G+KPSI+ FN VL   VEE R  ++V+
Sbjct: 124 PGVEDVLLSLVDAFVRNCRLNEALRVLFNMNLAGIKPSIDVFNFVLGALVEEKRGFQDVV 183

Query: 182 FVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGL 241
           FVYKEMVKA + P++DTLN+LL  LF  +++ +A++Q+RR++KKGC+PNS+TFEI++ GL
Sbjct: 184 FVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKGCIPNSRTFEIVIKGL 243

Query: 242 ITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDT 301
           I +N VD++V  L  + ++GC  +L F+   + LFC  DR+  G  LFR MK SN  PD 
Sbjct: 244 IAKNRVDDSVTILHEMLELGCLPELRFFRSTILLFCGEDRLQQGIRLFRKMKDSNFTPDP 303

Query: 302 LIYSTLIQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKD 361
            IY  LIQ LCK+L LDEA+ LLEEM+ES L P++NV+V I+  F +LGK +EAIK ++D
Sbjct: 304 FIYGALIQCLCKHLRLDEAANLLEEMMESRLTPDNNVFVDIVNGFCKLGKINEAIKLLED 363

Query: 362 RCFLFTSPHNALLEGCCNVGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIGKAF 421
           +    TSPHNALL  CC+     +A  +L +MS+ +IDDC SWNI+I WLC    +  A+
Sbjct: 364 KHVHVTSPHNALLRCCCDADKFFMAKGLLEKMSERNIDDCDSWNILIRWLCEKVGVMNAY 423

Query: 422 EFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESL 481
           E LG+MI+ S +P+  TY+AL+ GNC+  +YE ALQL  ++HA+ W+L    YSELIE L
Sbjct: 424 ELLGRMIISSLIPDCATYSALVAGNCRLSKYEDALQLFLQLHAKFWILDPASYSELIEGL 483

Query: 482 CQAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKT 541
           C+ ++ LEA +VFCYMS+NR  L    F+ LI+G+C++G ++EA+ L  L   +GTSC  
Sbjct: 484 CRGEKYLEAVKVFCYMSENRCSLQSLSFNMLIEGVCNMGMLNEAVRLQLLGYNSGTSCSN 543

Query: 542 VTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNR 601
            T   I+  LSKS+K +  L  LSQMLV G +L++E YCI I S  A  ++KD     N 
Sbjct: 544 ATCNYIMLGLSKSDKGKHMLAFLSQMLVQGTNLDMEAYCILIQSMIAQKQIKDCTLFLNV 603

Query: 602 MVNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWKEDR 661
           MVNEGL+PDS+ L+ LL C+A+HSQL++I  ++DKL++  +++++A YN+LINGLWKE  
Sbjct: 604 MVNEGLVPDSDTLYKLLSCLANHSQLYLISLSLDKLVSDCEVLDSAMYNILINGLWKEGN 663

Query: 662 KYEACKLLDSMLEKGWVPDATTHGLLIGS 688
           K EA +LLD MLEKGWVPD+ THGLLIGS
Sbjct: 664 KNEAHRLLDLMLEKGWVPDSMTHGLLIGS 692

[Close]
BLAST of CmoCh06G005430 vs. TAIR10
Match: AT5G64320.1 (AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 214.5 bits (545), Expect = 2.2e-55
Identity = 158/636 (24.84%), Postives = 297/636 (46.70%), Query Frame = 1 

Query: 66  NLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGCLGVEEVI 125
           N+++ +E+F     Q G+ H+   Y V I K G +G  + +DR    +  +G +  E + 
Sbjct: 90  NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149

Query: 126 VTLVNAFVRHGRTREALRVLPHV-NLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEM 185
           ++++  + + G   +  R++  + N+   +P+ +++NVVL + V  N   +    V+ +M
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCH-KVAANVFYDM 209

Query: 186 VKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGLITRNLV 245
           +   I P + T   ++ A     +I +A++  R M+K GCVPNS  ++ L++ L   N V
Sbjct: 210 LSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 269

Query: 246 DEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTL 305
           +EA+  L  ++ +GC  D   +   +   C+ DRI+  + +   M      PD + Y  L
Sbjct: 270 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 329

Query: 306 IQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKDRCFLF- 365
           +  LCK   +D A  L   + +    PE  ++ ++I  F   G+ D+A   + D    + 
Sbjct: 330 MNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 389

Query: 366 ----TSPHNALLEGCCNVGNILIANRVLGQM-SKMSIDDCKSWNIVIGWLCNNARIGKAF 425
                  +N+L+ G    G + +A  VL  M +K    +  S+ I++   C   +I +A+
Sbjct: 390 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 449

Query: 426 EFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESL 485
             L +M      PN   +  LI   CK  R   A+++  E+  +        ++ LI  L
Sbjct: 450 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 509

Query: 486 CQAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKT 545
           C+      A  +   M       +   ++TLI      G I EA  L+    + G+    
Sbjct: 510 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 569

Query: 546 VTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNR 605
           +TY S++  L ++ + + A  +  +ML  G++ +  +  I I+  C    V++++     
Sbjct: 570 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 629

Query: 606 MVNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWKEDR 665
           MV  G  PD    + L+  +    ++   LT   KL A     +T T+N L++ L K   
Sbjct: 630 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 689

Query: 666 KYEACKLLDSMLEKGWVPDATTHGLLIGSLVNENSV 695
            Y+AC LLD  +E G+VP+  T  +L+ S++ + ++
Sbjct: 690 VYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720

[Close]
BLAST of CmoCh06G005430 vs. TAIR10
Match: AT1G63130.1 (AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 181.0 bits (458), Expect = 2.7e-45
Identity = 128/470 (27.23%), Postives = 224/470 (47.66%), Query Frame = 1 

Query: 151 VGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIK 210
           +G+  ++ T+++++  F   ++ +   L V  +M+K    P++ TLN LL    H  +I 
Sbjct: 110 LGISHNLYTYSILINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 169

Query: 211 TAMNQFRRMSKKGCVPNSKTFEILLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAV 270
            A++   +M + G  P+S TF  L++GL   N   EAV  +  +   GC+ DL  Y   V
Sbjct: 170 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 229

Query: 271 SLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDEASFLLEEMVESGLM 330
           +  C+   ID+   L + M+   I P  +IY+T+I +LC    +++A  L  EM   G+ 
Sbjct: 230 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 289

Query: 331 PEDNVYVSIIKVFFELGKTDEAIKFVKDRCFLFTSPH----NALLEGCCNVGNILIANRV 390
           P    Y S+I+     G+  +A + + D      +P+    +AL++     G ++ A ++
Sbjct: 290 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 349

Query: 391 LGQMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCK 450
             +M K SID D  +++ +I   C + R+ +A      MI     PN  TY  LI G CK
Sbjct: 350 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 409

Query: 451 SRRYEAALQLMNEVHARCWVLHAGCYSELIESLCQAKRTLEAAEVFCYMSKNRYPLHPSL 510
           ++R +  ++L  E+  R  V +   Y+ LI    QA+    A  VF  M  +        
Sbjct: 410 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 469

Query: 511 FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTVTYASIVYELSKSNKAEIALLVLSQML 570
           +  L+ G+C+ G ++ ALV+ +    +       TY  ++  + K+ K E    +   + 
Sbjct: 470 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 529

Query: 571 VLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDSERLHDLL 616
           + G   N+ TY   +  FC     +++  LF  M  EG LPDS   + L+
Sbjct: 530 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578

[Close]
BLAST of CmoCh06G005430 vs. TAIR10
Match: AT1G63330.1 (AT1G63330.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 180.6 bits (457), Expect = 3.5e-45
Identity = 128/470 (27.23%), Postives = 226/470 (48.09%), Query Frame = 1 

Query: 151 VGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIK 210
           +G+  ++ T+N+++  F   ++ I   L +  +M+K    P++ TL+ LL    H ++I 
Sbjct: 39  LGISHNLYTYNILINCFCRRSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 98

Query: 211 TAMNQFRRMSKKGCVPNSKTFEILLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAV 270
            A+    +M + G  P++ TF  L++GL   N   EAV  +  + + GC+ +L  Y   V
Sbjct: 99  DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 158

Query: 271 SLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDEASFLLEEMVESGLM 330
           +  C+   ID+   L   M+A+ I  D +I++T+I SLCK   +D+A  L +EM   G+ 
Sbjct: 159 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 218

Query: 331 PEDNVYVSIIKVFFELGKTDEAIKFVKDRCFLFTSPH----NALLEGCCNVGNILIANRV 390
           P    Y S+I      G+  +A + + D      +P+    NAL++     G  + A ++
Sbjct: 219 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 278

Query: 391 LGQMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCK 450
              M K SID D  ++N +I   C + R+ KA +    M+     P+ DTY  LI G CK
Sbjct: 279 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 338

Query: 451 SRRYEAALQLMNEVHARCWVLHAGCYSELIESLCQAKRTLEAAEVFCYMSKNRYPLHPSL 510
           S+R E   +L  E+  R  V     Y+ LI+ L        A +VF  M  +  P     
Sbjct: 339 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 398

Query: 511 FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTVTYASIVYELSKSNKAEIALLVLSQML 570
           +  L+ G+C+ G +++AL +      +        Y +++  + K+ K +    +   + 
Sbjct: 399 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 458

Query: 571 VLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDSERLHDLL 616
           + G   N+ TY   I   C+   ++++  L  +M  +G LPDS   + L+
Sbjct: 459 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507

[Close]
BLAST of CmoCh06G005430 vs. TAIR10
Match: AT1G62910.1 (AT1G62910.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-44
Identity = 130/495 (26.26%), Postives = 239/495 (48.28%), Query Frame = 1 

Query: 128 LVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKA 187
           L++A  +  +    + +   +  +G+   + T+++ +  F   ++ +   L V  +M+K 
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ-LSLALAVLAKMMKL 148

Query: 188 SIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGLITRNLVDEA 247
              P++ TL+ LL    H+++I  A+    +M + G  P++ TF  L++GL   N   EA
Sbjct: 149 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 208

Query: 248 VLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQS 307
           V  +  + + GC+ DL  Y   V+  C+   ID+   L + M+   I  D +IY+T+I  
Sbjct: 209 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 268

Query: 308 LCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKDRCFLFTSPH 367
           LCK   +D+A  L  EM   G+ P+   Y S+I      G+  +A + + D      +P+
Sbjct: 269 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 328

Query: 368 ----NALLEGCCNVGNILIANRVLGQMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLG 427
               +AL++     G ++ A ++  +M K SID D  +++ +I   C + R+ +A     
Sbjct: 329 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 388

Query: 428 KMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESLCQAK 487
            MI     PN  TY+ LI G CK++R E  ++L  E+  R  V +   Y+ LI    QA+
Sbjct: 389 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 448

Query: 488 RTLEAAEVFCYMSKNRYPLHPSL--FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTVT 547
               A  VF  M      +HP++  ++ L+ G+C  G + +A+V+ +    +       T
Sbjct: 449 DCDNAQMVFKQMVS--VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 508

Query: 548 YASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMV 607
           Y  ++  + K+ K E    +   + + G S N+  Y   I  FC     +++ +L  +M 
Sbjct: 509 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 568

Query: 608 NEGLLPDSERLHDLL 616
            +G LP+S   + L+
Sbjct: 569 EDGPLPNSGTYNTLI 580

[Close]
BLAST of CmoCh06G005430 vs. TAIR10
Match: AT1G63150.1 (AT1G63150.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 176.8 bits (447), Expect = 5.0e-44
Identity = 128/493 (25.96%), Postives = 236/493 (47.87%), Query Frame = 1 

Query: 128 LVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKA 187
           L++A  +  +    + +   +  +G+   + T+++ +  F   ++ +   L V  +M+K 
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ-LSLALAVLAKMMKL 148

Query: 188 SIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGLITRNLVDEA 247
              P++ TL+ LL    H+++I  A+    +M + G  P++ TF  L++GL   N   EA
Sbjct: 149 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 208

Query: 248 VLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQS 307
           V  +  + + GC+ DL  Y   V+  C+   ID+   L   M+A+ I  + +I++T+I S
Sbjct: 209 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 268

Query: 308 LCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKDRCFLFTSPH 367
           LCK   ++ A  L  EM   G+ P    Y S+I      G+  +A + + +      +P+
Sbjct: 269 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 328

Query: 368 ----NALLEGCCNVGNILIANRVLGQMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLG 427
               NAL++     G ++ A ++  +M + SID D  ++N++I   C + R+ +A +   
Sbjct: 329 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 388

Query: 428 KMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESLCQAK 487
            M+    +PN  TY  LI G CK +R E  ++L  E+  R  V +   Y+ +I+   QA 
Sbjct: 389 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 448

Query: 488 RTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKTVTYA 547
               A  VF  M  NR P     +  L+ G+C  G +D ALV+ +    +        Y 
Sbjct: 449 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 508

Query: 548 SIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNE 607
           +++  + K+ K   A  +      L    ++ TY   I   C+   ++++  LF +M  +
Sbjct: 509 TMIEGMCKAGKVGEAWDLFCS---LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 568

Query: 608 GLLPDSERLHDLL 616
           G LP+S   + L+
Sbjct: 569 GTLPNSGTYNTLI 577

[Close]
BLAST of CmoCh06G005430 vs. NCBI nr
Match: gi|449437884|ref|XP_004136720.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 1157.1 bits (2992), Expect = 0.0e+00
Identity = 581/711 (81.72%), Postives = 643/711 (90.44%), Query Frame = 1 

Query: 1   MPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEESTQSLNNKFVLNNSV-- 60
           MPSTLMKKFLKGV PNSCLSPILSG +VD+FLENNQ+ PRL++STQ L++K V NNSV  
Sbjct: 6   MPSTLMKKFLKGVVPNSCLSPILSGIHVDTFLENNQNCPRLKQSTQFLSDKSVSNNSVNS 65

Query: 61  -KGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDG 120
            KGLD + NLNSEVEIFK LAIQKG   +VQTYY TILK GLDGN+EEM+ TC+DLV +G
Sbjct: 66  VKGLDYDKNLNSEVEIFKSLAIQKGIFQSVQTYYETILKLGLDGNIEEMEMTCRDLVNEG 125

Query: 121 CLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEV 180
           C GVEEVIVTLVN  VR GR REALRVLPH++LVGL+PS+ETFNVVLAV VEE+RDI+EV
Sbjct: 126 CSGVEEVIVTLVNTLVRRGRVREALRVLPHISLVGLRPSVETFNVVLAVLVEEDRDIQEV 185

Query: 181 LFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNG 240
           LFVYKEMVKA IVPNVDTLNFLLAALFHAEQIKTAMNQFRRM KKGC PNSKTFE+L+NG
Sbjct: 186 LFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFEVLVNG 245

Query: 241 LITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPD 300
           LIT+NLVDEAVL LGI+YKI CEL LSFYTCA+SLFCR DRIDVGSWLF MMKASNI+P 
Sbjct: 246 LITKNLVDEAVLVLGIMYKIRCELHLSFYTCAISLFCREDRIDVGSWLFTMMKASNIVPG 305

Query: 301 TLIYSTLIQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVK 360
           TLIYSTLIQSLCK+L LD+A FLLEEMVE+GL+PE++VYVSI++VFFELGKTDEAIKFV+
Sbjct: 306 TLIYSTLIQSLCKSLSLDKALFLLEEMVENGLIPEESVYVSIVEVFFELGKTDEAIKFVE 365

Query: 361 DRCFLFTSPHNALLEGCCNVGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIGKA 420
           DRC  +TSPHNALLEGC N G IL+AN +LG+MSKM+IDDCKSWNIVIGWLCNNA+IG A
Sbjct: 366 DRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNAKIGNA 425

Query: 421 FEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIES 480
           FEFLGKMIVLSFVPN+DTYAALI+GNCKSRRYEAALQLMNEVH+RCW+L+AGCYSELIE 
Sbjct: 426 FEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEAALQLMNEVHSRCWILNAGCYSELIEG 485

Query: 481 LCQAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCK 540
           LCQA RTLEAAEVFC+MSKNR+PLHPSLFDTLIKG+CDLGH+DEALVLLQLA YAGTSCK
Sbjct: 486 LCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKGMCDLGHVDEALVLLQLASYAGTSCK 545

Query: 541 TVTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFN 600
           +VTYASI++ELSKSNKAE ALLVLSQMLVLG +L+LETY I IHSF ++NRVK+SI LFN
Sbjct: 546 SVTYASIIHELSKSNKAETALLVLSQMLVLGCNLDLETYYILIHSFSSINRVKESILLFN 605

Query: 601 RMVNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWKED 660
            MVNE LLPDSERL+DL LCIA+HSQLHMI TTIDKL+ HTDLVNTATYNLLINGLWKED
Sbjct: 606 HMVNEALLPDSERLYDLFLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLINGLWKED 665

Query: 661 RKYEACKLLDSMLEKGWVPDATTHGLLIGS----------LVNENSVIEDN 699
           RKYEACKLLDSMLEKGWVPDATTHGLLIGS          L++ENS IEDN
Sbjct: 666 RKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDKVLISENSAIEDN 716

[Close]
BLAST of CmoCh06G005430 vs. NCBI nr
Match: gi|659084558|ref|XP_008442951.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 567/711 (79.75%), Postives = 633/711 (89.03%), Query Frame = 1 

Query: 1   MPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEESTQSLNNKFVLNNSV-- 60
           MPSTLMKKFLKGV PNS LSPILSG +VD+ LENNQ+ PRL++STQ  ++K V NNSV  
Sbjct: 6   MPSTLMKKFLKGVVPNSRLSPILSGIHVDTSLENNQNCPRLKQSTQFSSDKSVTNNSVNS 65

Query: 61  -KGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDG 120
            KGLD +  LNSEVEIFKCLAIQKGF  TVQTYY TI+K GL+GN++EM+RTC+DLV +G
Sbjct: 66  VKGLDYDKKLNSEVEIFKCLAIQKGFFETVQTYYETIVKLGLNGNIDEMERTCRDLVNEG 125

Query: 121 CLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEV 180
           C GVEE+IV+LVN  VR GR REAL V PH++ VGL+PS+ETFNVVLAVFVEE+RDI+EV
Sbjct: 126 CSGVEEIIVSLVNTLVRRGRAREALWVFPHISSVGLRPSVETFNVVLAVFVEEDRDIQEV 185

Query: 181 LFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNG 240
           LFVYKEMVKA IVPNVDTLNFL AALFHAEQIKTAMNQFRRM KKGC PNSKTFE+L+N 
Sbjct: 186 LFVYKEMVKAGIVPNVDTLNFLFAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFEVLVNA 245

Query: 241 LITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPD 300
           LIT+NLVDEAVL LGI+YK  CELDLSFYTCA+SLFCR DRIDVGSWLF MMKASNI+P 
Sbjct: 246 LITKNLVDEAVLVLGIMYKSQCELDLSFYTCAISLFCREDRIDVGSWLFTMMKASNIVPG 305

Query: 301 TLIYSTLIQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVK 360
           TLIY+TLIQSLCK+L LD+A FLLEEMVESGL+PE++VYVSII+VFFELGKTDEAIKFV+
Sbjct: 306 TLIYNTLIQSLCKSLSLDKALFLLEEMVESGLIPEESVYVSIIEVFFELGKTDEAIKFVE 365

Query: 361 DRCFLFTSPHNALLEGCCNVGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIGKA 420
           DRC  +TSPHNALLEGC N G IL+AN +LG+MSKM+IDDCKSWNIVIGWLCNNARIG A
Sbjct: 366 DRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNARIGNA 425

Query: 421 FEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIES 480
           FEFLGKMIVLSFVPN+DTYAALI+GNCKSRRYE ALQLMNEVH++CW+L+AGCYSELIE 
Sbjct: 426 FEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEVALQLMNEVHSKCWILNAGCYSELIEG 485

Query: 481 LCQAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCK 540
           LCQA RTLEAAEVFC+MSKNR+PLHPSLFDTLIK +CDLGH+DE LVLLQLA YAGTSCK
Sbjct: 486 LCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKEMCDLGHVDETLVLLQLASYAGTSCK 545

Query: 541 TVTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFN 600
           TVTYASI++ELSK+NKA  ALLVLSQMLVLG +L+LETY I IHSF ++NRV +SI LFN
Sbjct: 546 TVTYASILHELSKTNKAVTALLVLSQMLVLGCNLDLETYYILIHSFSSINRVNESILLFN 605

Query: 601 RMVNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWKED 660
            MVNE LLPDSE L++LLLCIA+HSQLHMI TTIDKL+ HTDLVNTATYNLLINGLWKED
Sbjct: 606 CMVNEALLPDSEGLYNLLLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLINGLWKED 665

Query: 661 RKYEACKLLDSMLEKGWVPDATTHGLLIGS----------LVNENSVIEDN 699
           RKYEACKLLDSMLEKGWVPDATTHGLLIGS          L++ENS IEDN
Sbjct: 666 RKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDRVLISENSAIEDN 716

[Close]
BLAST of CmoCh06G005430 vs. NCBI nr
Match: gi|1009179194|ref|XP_015870949.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Ziziphus jujuba])

HSP 1 Score: 695.7 bits (1794), Expect = 9.2e-197
Identity = 349/691 (50.51%), Postives = 491/691 (71.06%), Query Frame = 1 

Query: 4   TLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNP----RLEESTQSLNNKFVLNNSVK 63
           TL K+    V P++ +S I     V++F E+NQ +P    + E++   L N    +N ++
Sbjct: 9   TLSKRNPIWVSPSAWISSISCARTVENFPESNQDHPPNSSQFEQNVNILRNNLAPDNLIR 68

Query: 64  GLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGCL 123
            LD+ N+L++ V++FK  ++QK FSHT  TYY  ILK GL G+V+EM+  CQ++VKD C+
Sbjct: 69  VLDSTNDLSAAVKVFKWASLQKRFSHTADTYYRVILKLGLAGHVQEMEGFCQNMVKDKCI 128

Query: 124 GVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVLF 183
           G +E +  LV+ FV+H R  EA+ VL  +N  G  PSIETFN V+  FV+E RD++EVLF
Sbjct: 129 GGKEALTALVDTFVKHCRIDEAVLVLVSMNSGGYNPSIETFNSVMGAFVKEKRDLQEVLF 188

Query: 184 VYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGLI 243
           +YKE+VKA  +P +DTLN+LL ALF  + +++A++QF+RM+KKGC PNS++FEIL+ GLI
Sbjct: 189 IYKEIVKAGNLPTIDTLNYLLEALFETDHVESALDQFKRMNKKGCSPNSRSFEILIKGLI 248

Query: 244 TRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTL 303
            ++ VDEAV  L  +++   + ++SF++C + LFC  ++ +VG  LFRMMK  N +PD L
Sbjct: 249 AKSRVDEAVSVLNEMFESRFQAEMSFFSCTIPLFCLENKPEVGIKLFRMMKDCNFVPDLL 308

Query: 304 IYSTLIQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKDR 363
            Y+ L++ LC NL LD+   L+EEM E+GL   D  YV +I +F  LGK D+AI+F++D 
Sbjct: 309 TYAVLVRCLCDNLWLDDVINLIEEMTEAGLTLPDKAYVDVINMFSRLGKFDQAIEFLEDN 368

Query: 364 CFLFTSPHNALLEGCCNVGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIGKAFE 423
             L TS HN LLEGCC+ G + +A  +L +MS+ +IDDC SWNI++  +C      KA +
Sbjct: 369 HVLETSAHNVLLEGCCSAGKLCMAKHLLEKMSERNIDDCDSWNILVRCVCEQEGSRKASQ 428

Query: 424 FLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESLC 483
            +G+M+VLSF+P+  TY+AL+ GNCK  +YE A++L  ++ A+CWVL++  YS+LIE LC
Sbjct: 429 LIGRMVVLSFIPDCATYSALVTGNCKLSKYEDAVKLFYQIQAKCWVLNSVSYSKLIEGLC 488

Query: 484 QAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKTV 543
              R +EAAEVFCYMS+  Y L  SLF+ LIKG+C LG +DEA+ L + ACY+GTSC + 
Sbjct: 489 HVGRIVEAAEVFCYMSRKGYSLGSSLFNLLIKGVCSLGKVDEAIRLCRWACYSGTSCTSS 548

Query: 544 TYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRM 603
           TY +I+  L+K+NK +  LLVLSQMLV G  L+LE YCI I +    NR+K S+ LFN M
Sbjct: 549 TYTTIMIGLAKANKGKDLLLVLSQMLVEGCGLDLEAYCILILNMSLQNRIKYSVLLFNMM 608

Query: 604 VNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWKEDRK 663
           V EGL+P SE+L ++L CIAD SQL MI  +IDKLI++ +++N + YNLLINGL KE  K
Sbjct: 609 VEEGLIPKSEKLLEILSCIADQSQLCMISCSIDKLISNCEIMNPSIYNLLINGLLKEGNK 668

Query: 664 YEACKLLDSMLEKGWVPDATTHGLLIGSLVN 691
           +EAC+LLD MLEKGWVPD+ THGLLIGS+V+
Sbjct: 669 HEACRLLDLMLEKGWVPDSKTHGLLIGSVVS 699

[Close]
BLAST of CmoCh06G005430 vs. NCBI nr
Match: gi|1009179502|ref|XP_015871114.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g46100-like [Ziziphus jujuba])

HSP 1 Score: 695.7 bits (1794), Expect = 9.2e-197
Identity = 349/691 (50.51%), Postives = 491/691 (71.06%), Query Frame = 1 

Query: 4   TLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNP----RLEESTQSLNNKFVLNNSVK 63
           TL K+    V P++ +S I     V++F E+NQ +P    + E++   L N    +N ++
Sbjct: 9   TLSKRNPIWVSPSAWISSISCARTVENFPESNQDHPPNSSQFEQNVNILRNNLAPDNLIR 68

Query: 64  GLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGCL 123
            LD+ N+L++ V++FK  ++QK FSHT  TYY  ILK GL G+V+EM+  CQ++VKD C+
Sbjct: 69  VLDSTNDLSAAVKVFKWASLQKRFSHTADTYYRVILKLGLAGHVQEMEGFCQNMVKDKCI 128

Query: 124 GVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVLF 183
           G +E +  LV+ FV+H R  EA+ VL  +N  G  PSIETFN V+  FV+E RD++EVLF
Sbjct: 129 GGKEALTALVDTFVKHCRIDEAVLVLVSMNSGGYNPSIETFNSVMGAFVKEKRDLQEVLF 188

Query: 184 VYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGLI 243
           +YKE+VKA  +P +DTLN+LL ALF  + +++A++QF+RM+KKGC PNS++FEIL+ GLI
Sbjct: 189 IYKEIVKAGNLPTIDTLNYLLEALFETDHVESALDQFKRMNKKGCSPNSRSFEILIKGLI 248

Query: 244 TRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTL 303
            ++ VDEAV  L  +++   + ++SF++C + LFC  ++ +VG  LFRMMK  N +PD L
Sbjct: 249 AKSRVDEAVSVLNEMFESRFQAEMSFFSCTIPLFCLENKPEVGIKLFRMMKDCNFVPDLL 308

Query: 304 IYSTLIQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKDR 363
            Y+ L++ LC NL LD+   L+EEM E+GL   D  YV +I +F  LGK D+AI+F++D 
Sbjct: 309 TYAVLVRCLCDNLWLDDVINLIEEMTEAGLTLPDKAYVDVINMFSRLGKFDQAIEFLEDN 368

Query: 364 CFLFTSPHNALLEGCCNVGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIGKAFE 423
             L TS HN LLEGCC+ G + +A  +L +M++ +IDDC SWNI++  +C      KA +
Sbjct: 369 HVLETSAHNVLLEGCCSAGKLCMAKHLLEKMAERNIDDCDSWNILVRCVCEQEGSRKASQ 428

Query: 424 FLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESLC 483
            +G+M+VLSF+P+  TY+AL+ GNCK  +YE AL+L  ++ A+CWVL++  YS+LIE LC
Sbjct: 429 LIGRMVVLSFIPDCATYSALVTGNCKLSKYEDALKLFYQIQAKCWVLNSVSYSKLIEGLC 488

Query: 484 QAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKTV 543
              R +EAAEVFCYMS+  Y L  SLF+ LIKG+C LG +DEA+ L + ACY+GTSC + 
Sbjct: 489 HVGRIVEAAEVFCYMSRKGYSLGSSLFNLLIKGVCSLGKVDEAIRLCRWACYSGTSCTSS 548

Query: 544 TYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRM 603
           TY +I+  L+K+NK +  LLVLSQMLV G  L+LE YCI I +    NR+K S+ LFN M
Sbjct: 549 TYTTIMIGLAKANKGKDLLLVLSQMLVEGCGLDLEAYCILILNMSLQNRIKYSVLLFNMM 608

Query: 604 VNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWKEDRK 663
           V EGL+P SE+L ++L CIAD SQL MI  +IDKLI++ +++N + YNLLINGL KE  K
Sbjct: 609 VEEGLIPKSEKLLEILSCIADQSQLCMISCSIDKLISNCEIMNPSIYNLLINGLLKEGNK 668

Query: 664 YEACKLLDSMLEKGWVPDATTHGLLIGSLVN 691
           +EAC+LLD MLEKGWVPD+ THGLLIGS+V+
Sbjct: 669 HEACRLLDLMLEKGWVPDSKTHGLLIGSVVS 699

[Close]
BLAST of CmoCh06G005430 vs. NCBI nr
Match: gi|595842090|ref|XP_007208344.1| (hypothetical protein PRUPE_ppa002033mg [Prunus persica])

HSP 1 Score: 694.5 bits (1791), Expect = 2.0e-196
Identity = 355/693 (51.23%), Postives = 486/693 (70.13%), Query Frame = 1 

Query: 2   PSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPR---LEESTQSLNNKFVLNNSV 61
           P T  K+    V   +C+S       V+ F   NQ  P     E++ QSL NK V +N +
Sbjct: 4   PLTFSKRIPFWVCSGACISSASCAKTVECFPGKNQDPPNSSDFEQNIQSLRNKLVPDNLI 63

Query: 62  KGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGC 121
           + LDN ++L+S V++FK  ++Q+ F+HT  TYY  ILK GL G VEEM+  CQ++VKD C
Sbjct: 64  RVLDNTDDLSSAVKVFKWASLQRRFNHTADTYYRIILKLGLAGKVEEMEGFCQNMVKDKC 123

Query: 122 LGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVL 181
            GVEE ++ LV+ FV+H R  EA+RVL ++   G +PSIETFN VL   VE+ RD ++VL
Sbjct: 124 PGVEEALLALVDMFVKHCRQSEAIRVLVNMKAGGYRPSIETFNAVLGALVEDKRDFQDVL 183

Query: 182 FVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILLNGL 241
           FVYKEMV A I+P ++TLN+LL AL   + I++A+ Q+RRM KKGC PN +TFEIL+   
Sbjct: 184 FVYKEMVTAGILPTIETLNYLLEALLETDHIESALGQYRRMKKKGCSPNCRTFEILIKAH 243

Query: 242 ITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDT 301
           I +  VDEAV+ L  + ++GC+ DLSFY+  + LFC+ +R + G  LF MM+ASN +PD+
Sbjct: 244 IAKGRVDEAVIVLSEMLELGCQPDLSFYSTLIPLFCQNNRPEEGIRLFEMMRASNFMPDS 303

Query: 302 LIYSTLIQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKFVKD 361
           LI   L+Q LCKNL L++A  +LE+M+E+GL P ++V+  ++ VF +LGK D+A+KF++D
Sbjct: 304 LICGVLLQCLCKNLCLNDAIKVLEDMMETGLTPANDVFADVVNVFCKLGKIDDAMKFLED 363

Query: 362 RCFLFTSPHNALLEGCCNVGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIGKAF 421
           +  L TS  N LLEGCC+ G  L+A  +L +MS+  + DC SWNI+I WLC N+RI  A 
Sbjct: 364 KHILETSVCNVLLEGCCSAGKFLMAKDLLVKMSESDVADCNSWNILIRWLCENSRIRVAS 423

Query: 422 EFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELIESL 481
           E LG+M+V S +P+  TY+AL+IGNCK   Y  AL L + + A+ WVL    YSEL++ L
Sbjct: 424 EILGRMVVSSSLPDCATYSALVIGNCKMSNYRNALDLFHHIRAKSWVLDPTSYSELVKGL 483

Query: 482 CQAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKT 541
           C  + T EA EVFCYMS NR  +  S F+ LIKG+C+ G +DEA+ L +LA Y+GTS  +
Sbjct: 484 CLVEMTHEATEVFCYMSSNRCSIQSSSFNMLIKGVCETGKVDEAIRLQKLAYYSGTSSTS 543

Query: 542 VTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNR 601
            TY++I++ LSK + A+  L+VLS+MLV G +L+L+ YCI I S    NRVK+ I LF  
Sbjct: 544 STYSAIMFGLSKVDNAKDLLVVLSKMLVEGCNLDLDAYCILIQSMSLQNRVKECILLFRM 603

Query: 602 MVNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWKEDR 661
           MVN+GL+PDSERL +LL CIA+ SQLH+I  +IDKL + ++ +N+A YN+LINGLWKE  
Sbjct: 604 MVNKGLIPDSERLFNLLSCIANLSQLHVISDSIDKLASSSEALNSAIYNVLINGLWKEGY 663

Query: 662 KYEACKLLDSMLEKGWVPDATTHGLLIGSLVNE 692
           K+EAC+LLD MLEKGWVPDA THGLLIGS V+E
Sbjct: 664 KHEACRLLDIMLEKGWVPDAKTHGLLIGSAVSE 696

The following BLAST results are available for this feature:
BLAST of CmoCh06G005430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP444_ARATH3.9e-5424.84Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
PPR99_ARATH4.7e-4427.23Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... [more]
PP101_ARATH6.2e-4427.23Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana GN... [more]
PPR94_ARATH2.4e-4326.26Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN... [more]
PP100_ARATH8.9e-4325.96Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana GN... [more]
BLAST of CmoCh06G005430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LE83_CUCSA0.0e+0081.72Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782810 PE=4 SV=1[more]
M5WJY3_PRUPE1.4e-19651.23Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002033mg PE=4 SV=1[more]
B9N416_POPTR5.6e-19350.36Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s00500g PE=4 SV=1[more]
A0A067JKK4_JATCU3.7e-18949.13Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23171 PE=4 SV=1[more]
B9I6D0_POPTR1.9e-18849.49Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s00430g PE=4 SV=1[more]
BLAST of CmoCh06G005430 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G64320.12.2e-5524.84 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G63130.12.7e-4527.23 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G63330.13.5e-4527.23 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G62910.11.3e-4426.26 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G63150.15.0e-4425.96 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CmoCh06G005430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437884|ref|XP_004136720.1|0.0e+0081.72PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic-... [more]
gi|659084558|ref|XP_008442951.1|0.0e+0079.75PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-... [more]
gi|1009179194|ref|XP_015870949.1|9.2e-19750.51PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Ziziphus ... [more]
gi|1009179502|ref|XP_015871114.1|9.2e-19750.51PREDICTED: pentatricopeptide repeat-containing protein At5g46100-like [Ziziphus ... [more]
gi|595842090|ref|XP_007208344.1|2.0e-19651.23hypothetical protein PRUPE_ppa002033mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G005430.1CmoCh06G005430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 435..459
score: 0.098coord: 400..426
score: 0.043coord: 471..497
score:
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 294..325
score: 4.7E-7coord: 568..600
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 191..238
score: 5.5E-11coord: 642..688
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 127..169
score: 8.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 575..608
score: 9.9E-7coord: 645..678
score: 1.4E-5coord: 400..432
score: 4.9E-5coord: 300..331
score: 2.1E-4coord: 159..193
score: 0.0031coord: 470..498
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 227..261
score: 6.84coord: 467..501
score: 8.177coord: 297..331
score: 11.586coord: 432..466
score: 8.068coord: 502..536
score: 6.895coord: 121..155
score: 7.52coord: 642..676
score: 11.323coord: 262..296
score: 9.109coord: 363..393
score: 6.423coord: 537..571
score: 7.607coord: 156..191
score: 9.328coord: 572..606
score: 10.764coord: 397..431
score: 9.098coord: 192..226
score: 9
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 33..352
score: 1.3E-212coord: 396..517
score: 1.3E-212coord: 553..683
score: 1.3E
NoneNo IPR availablePANTHERPTHR24015:SF804SUBFAMILY NOT NAMEDcoord: 33..352
score: 1.3E-212coord: 396..517
score: 1.3E-212coord: 553..683
score: 1.3E