CmaCh06G005410 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G005410
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCma_Chr06 : 2553802 .. 2555949 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAAGGCTCATGCCGTCGACTCTTATGAAGAAATTTCTCAAAGGGGTTAAACCAAATTCATGCTTATCTCCAATTCTTAGTGGTAATTATGTTGATTCTTTCCTGGAAAACAATCAGAGTAATCCAAGGTTAGAAGAAAGTACACAATCCTTGAACAATAAGTTTGTCTTAAACAACTCGGTCAAAGGTTTGGATAATGAAAATAACCTGAACTCAGAGGTAGAAATCTTCAAATGTTTGGCTATCCAGAAGGGATTTTCCCATACGGTCCAAACATATTATGTGACGATTCTCAAGCAGGGTTTGGATGGGAACGTTGAGGAAATGGATAGGACATGTCAAGATCTGGTGAAGGATGGGTGTCTGGGTGTTGAAGAAGTTATTGTCACTTTGGTTAATGCCTTTGTTAGACATGGTAGAACCAGAGAAGCACTTCGGGTACTTCCTCATGTAAACTTGGTTGGTTTAAAGCCTTCGATAGAGACATTTAACGTTGTATTGGCTGTTTTCGTTGAGGAGAACAGAGATATTGAAGAGGTTTTATTTGTTTACAAAGAGATGGTGAAAGCTAGCATTGTACCAAATGTTGACACATTAAATTTTCTGTTAGCTGCATTGTTTCATGCTGAACAAATCAAGACAGCCATGAACCAGTTTAGGAGAATGAGCAAGAAAGGATGCGTTCCTAACAGTAAAACCTTTGAGGTTCTCTTAAATGGTTTAATTACACGAAATCTAGTGGATGAAGCTGTTTTAGCTTTGGGTATATTATACAAAATTGGGTGCGAACTTGATTTGAGCTTTTATACATGTGCAGTATCTTTATTTTGTAGGGTAGACAGAATAGATGTTGGAAGCTGGTTGTTTAGAATGATGAAAGCTTCCAATATTATACCAGATACCTTGATTTATAGTACTCTAATACAAAGTTTGTGCAAAAATCTATTATTAGATGAGGCATTATTTCTGCTCGAAGAGATGGCCGAAAGTGGTTTGAGGCCCAAAGACGATGTATATGTAGGTATTATAAAAGTTTTTTTTGAGCTTGGGAAAACCGGTGAGGCTATAAAGTTCGTGAAAGATAGATGTTTTTTGTTCACTTCTCCTCACAACGCATTGCTTGAAGGTTGCTGCAATGTTGAAAATATCTTAATAGCAAATCGTGTCTTAGGACGAATGTCGAAAATGAGTATTGATGATTGTAAATCTTGGAACATAGTTATTGGATGGTTGTGCAACAATGCAAGAATTGGAAAAGCTTTTGAATTCCTTGGTAAAATGATTGTGTTGTCATTTGTGCCAAACAAAGACACATATGCAGCTCTTATAATTGGAAATTGTAAATCCAGGAGGTACGAGGCTGCATTACAGTTAATGAACGAGGTACATGCTAGATGTTGGGTTCTTCATGCTGTATGTTACTCCGAGCTTATCGAAAGCCTTTGCCAAGCCAAAAGGACTCTTGAGGCTGCAGAAGTCTTTTGCTACATGTCTAAAAACAAATACCCTCTTCATCCTTCTTTATTTGATACATTGATCAAAGGGATATGTGATTTAGGACATATCGATGAAGCTTTAGTGCTGCTACAATTGGCATGTTATGCTGGTACTTCTTGTAAAACCATGACGTATGCTTCTATCGTGTACGAGTTGTCTAAATCTAACAAGGCAGAGATTGCCTTACTAGTCTTATCACAGATGCTTGTGTTGGGCTATAGCCTTAATTTGGAGACATACTGCATTTTCATACATAGTTTTTGTGCCATGAATCGAGTAAAGGATTCTATAACGCTTTTCAACCGTATGGTCAATGAGGGTCTTCTACCTGATTCAGAAAGACTTTATGATTTATTGTTATGTATAGCCGACCATTCTCAGCTACATATGATTTTGACTACAATTGATAAACTGATTGAACATACTGACCTTGTAAATACTGCTACTTACAACTTGCTTATCAATGGGCTTTGGAAAGAGGACAGAAAATATGAAGCATGTAAATTGTTGGACTCGATGTTGGAAAAGGGGTGGGTACCGGATGCTATGACTCATGGATTGCTGATTGGCTCTCTAGTTAATGAGAGTTCTGTCATTGAGGATAATGTAAGCAGCATACTTGTTGAGGGCCTAGGGAATACATGA

mRNA sequence

ATGGCTGCAAGGCTCATGCCGTCGACTCTTATGAAGAAATTTCTCAAAGGGGTTAAACCAAATTCATGCTTATCTCCAATTCTTAGTGGTAATTATGTTGATTCTTTCCTGGAAAACAATCAGAGTAATCCAAGGTTAGAAGAAAGTACACAATCCTTGAACAATAAGTTTGTCTTAAACAACTCGGTCAAAGGTTTGGATAATGAAAATAACCTGAACTCAGAGGTAGAAATCTTCAAATGTTTGGCTATCCAGAAGGGATTTTCCCATACGGTCCAAACATATTATGTGACGATTCTCAAGCAGGGTTTGGATGGGAACGTTGAGGAAATGGATAGGACATGTCAAGATCTGGTGAAGGATGGGTGTCTGGGTGTTGAAGAAGTTATTGTCACTTTGGTTAATGCCTTTGTTAGACATGGTAGAACCAGAGAAGCACTTCGGGTACTTCCTCATGTAAACTTGGTTGGTTTAAAGCCTTCGATAGAGACATTTAACGTTGTATTGGCTGTTTTCGTTGAGGAGAACAGAGATATTGAAGAGGTTTTATTTGTTTACAAAGAGATGGTGAAAGCTAGCATTGTACCAAATGTTGACACATTAAATTTTCTGTTAGCTGCATTGTTTCATGCTGAACAAATCAAGACAGCCATGAACCAGTTTAGGAGAATGAGCAAGAAAGGATGCGTTCCTAACAGTAAAACCTTTGAGGTTCTCTTAAATGGTTTAATTACACGAAATCTAGTGGATGAAGCTGTTTTAGCTTTGGGTATATTATACAAAATTGGGTGCGAACTTGATTTGAGCTTTTATACATGTGCAGTATCTTTATTTTGTAGGGTAGACAGAATAGATGTTGGAAGCTGGTTGTTTAGAATGATGAAAGCTTCCAATATTATACCAGATACCTTGATTTATAGTACTCTAATACAAAGTTTGTGCAAAAATCTATTATTAGATGAGGCATTATTTCTGCTCGAAGAGATGGCCGAAAGTGGTTTGAGGCCCAAAGACGATGTATATGTAGGTATTATAAAAGTTTTTTTTGAGCTTGGGAAAACCGGTGAGGCTATAAAGTTCGTGAAAGATAGATGTTTTTTGTTCACTTCTCCTCACAACGCATTGCTTGAAGGTTGCTGCAATGTTGAAAATATCTTAATAGCAAATCGTGTCTTAGGACGAATGTCGAAAATGAGTATTGATGATTGTAAATCTTGGAACATAGTTATTGGATGGTTGTGCAACAATGCAAGAATTGGAAAAGCTTTTGAATTCCTTGGTAAAATGATTGTGTTGTCATTTGTGCCAAACAAAGACACATATGCAGCTCTTATAATTGGAAATTGTAAATCCAGGAGGTACGAGGCTGCATTACAGTTAATGAACGAGGTACATGCTAGATGTTGGGTTCTTCATGCTGTATGTTACTCCGAGCTTATCGAAAGCCTTTGCCAAGCCAAAAGGACTCTTGAGGCTGCAGAAGTCTTTTGCTACATGTCTAAAAACAAATACCCTCTTCATCCTTCTTTATTTGATACATTGATCAAAGGGATATGTGATTTAGGACATATCGATGAAGCTTTAGTGCTGCTACAATTGGCATGTTATGCTGGTACTTCTTGTAAAACCATGACGTATGCTTCTATCGTGTACGAGTTGTCTAAATCTAACAAGGCAGAGATTGCCTTACTAGTCTTATCACAGATGCTTGTGTTGGGCTATAGCCTTAATTTGGAGACATACTGCATTTTCATACATAGTTTTTGTGCCATGAATCGAGTAAAGGATTCTATAACGCTTTTCAACCGTATGGTCAATGAGGGTCTTCTACCTGATTCAGAAAGACTTTATGATTTATTGTTATGTATAGCCGACCATTCTCAGCTACATATGATTTTGACTACAATTGATAAACTGATTGAACATACTGACCTTGTAAATACTGCTACTTACAACTTGCTTATCAATGGGCTTTGGAAAGAGGACAGAAAATATGAAGCATGTAAATTGTTGGACTCGATGTTGGAAAAGGGGTGGGTACCGGATGCTATGACTCATGGATTGCTGATTGGCTCTCTAGTTAATGAGAGTTCTGTCATTGAGGATAATGTAAGCAGCATACTTGTTGAGGGCCTAGGGAATACATGA

Coding sequence (CDS)

ATGGCTGCAAGGCTCATGCCGTCGACTCTTATGAAGAAATTTCTCAAAGGGGTTAAACCAAATTCATGCTTATCTCCAATTCTTAGTGGTAATTATGTTGATTCTTTCCTGGAAAACAATCAGAGTAATCCAAGGTTAGAAGAAAGTACACAATCCTTGAACAATAAGTTTGTCTTAAACAACTCGGTCAAAGGTTTGGATAATGAAAATAACCTGAACTCAGAGGTAGAAATCTTCAAATGTTTGGCTATCCAGAAGGGATTTTCCCATACGGTCCAAACATATTATGTGACGATTCTCAAGCAGGGTTTGGATGGGAACGTTGAGGAAATGGATAGGACATGTCAAGATCTGGTGAAGGATGGGTGTCTGGGTGTTGAAGAAGTTATTGTCACTTTGGTTAATGCCTTTGTTAGACATGGTAGAACCAGAGAAGCACTTCGGGTACTTCCTCATGTAAACTTGGTTGGTTTAAAGCCTTCGATAGAGACATTTAACGTTGTATTGGCTGTTTTCGTTGAGGAGAACAGAGATATTGAAGAGGTTTTATTTGTTTACAAAGAGATGGTGAAAGCTAGCATTGTACCAAATGTTGACACATTAAATTTTCTGTTAGCTGCATTGTTTCATGCTGAACAAATCAAGACAGCCATGAACCAGTTTAGGAGAATGAGCAAGAAAGGATGCGTTCCTAACAGTAAAACCTTTGAGGTTCTCTTAAATGGTTTAATTACACGAAATCTAGTGGATGAAGCTGTTTTAGCTTTGGGTATATTATACAAAATTGGGTGCGAACTTGATTTGAGCTTTTATACATGTGCAGTATCTTTATTTTGTAGGGTAGACAGAATAGATGTTGGAAGCTGGTTGTTTAGAATGATGAAAGCTTCCAATATTATACCAGATACCTTGATTTATAGTACTCTAATACAAAGTTTGTGCAAAAATCTATTATTAGATGAGGCATTATTTCTGCTCGAAGAGATGGCCGAAAGTGGTTTGAGGCCCAAAGACGATGTATATGTAGGTATTATAAAAGTTTTTTTTGAGCTTGGGAAAACCGGTGAGGCTATAAAGTTCGTGAAAGATAGATGTTTTTTGTTCACTTCTCCTCACAACGCATTGCTTGAAGGTTGCTGCAATGTTGAAAATATCTTAATAGCAAATCGTGTCTTAGGACGAATGTCGAAAATGAGTATTGATGATTGTAAATCTTGGAACATAGTTATTGGATGGTTGTGCAACAATGCAAGAATTGGAAAAGCTTTTGAATTCCTTGGTAAAATGATTGTGTTGTCATTTGTGCCAAACAAAGACACATATGCAGCTCTTATAATTGGAAATTGTAAATCCAGGAGGTACGAGGCTGCATTACAGTTAATGAACGAGGTACATGCTAGATGTTGGGTTCTTCATGCTGTATGTTACTCCGAGCTTATCGAAAGCCTTTGCCAAGCCAAAAGGACTCTTGAGGCTGCAGAAGTCTTTTGCTACATGTCTAAAAACAAATACCCTCTTCATCCTTCTTTATTTGATACATTGATCAAAGGGATATGTGATTTAGGACATATCGATGAAGCTTTAGTGCTGCTACAATTGGCATGTTATGCTGGTACTTCTTGTAAAACCATGACGTATGCTTCTATCGTGTACGAGTTGTCTAAATCTAACAAGGCAGAGATTGCCTTACTAGTCTTATCACAGATGCTTGTGTTGGGCTATAGCCTTAATTTGGAGACATACTGCATTTTCATACATAGTTTTTGTGCCATGAATCGAGTAAAGGATTCTATAACGCTTTTCAACCGTATGGTCAATGAGGGTCTTCTACCTGATTCAGAAAGACTTTATGATTTATTGTTATGTATAGCCGACCATTCTCAGCTACATATGATTTTGACTACAATTGATAAACTGATTGAACATACTGACCTTGTAAATACTGCTACTTACAACTTGCTTATCAATGGGCTTTGGAAAGAGGACAGAAAATATGAAGCATGTAAATTGTTGGACTCGATGTTGGAAAAGGGGTGGGTACCGGATGCTATGACTCATGGATTGCTGATTGGCTCTCTAGTTAATGAGAGTTCTGTCATTGAGGATAATGTAAGCAGCATACTTGTTGAGGGCCTAGGGAATACATGA

Protein sequence

MAARLMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEESTQSLNNKFVLNNSVKGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEVLLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEAIKFVKDRCFLFTSPHNALLEGCCNVENILIANRVLGRMSKMSIDDCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYSELIESLCQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKTMTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLINGLWKEDRKYEACKLLDSMLEKGWVPDAMTHGLLIGSLVNESSVIEDNVSSILVEGLGNT
Homology
[Close]
BLAST of CmaCh06G005410 vs. Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.4e-50
Identity = 154/636 (24.21%), Postives = 292/636 (45.91%), Query Frame = 1 

Query: 71  NLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGCLGVEEVI 130
           N+++ +E+F     Q G+ H+   Y V I K G +G  + +DR    +  +G +  E + 
Sbjct: 90  NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149

Query: 131 VTLVNAFVRHGRTREALRVLPHV-NLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEM 190
           ++++  + + G   +  R++  + N+   +P+ +++NVVL + V  N   +    V+ +M
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCH-KVAANVFYDM 209

Query: 191 VKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEVLLNGLITRNLV 250
           +   I P + T   ++ A     +I +A++  R M+K GCVPNS  ++ L++ L   N V
Sbjct: 210 LSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 269

Query: 251 DEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTL 310
           +EA+  L  ++ +GC  D   +   +   C+ DRI+  + +   M      PD + Y  L
Sbjct: 270 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 329

Query: 311 IQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEAIKFVKDRCFLF- 370
           +  LCK   +D A  L   +     +P+  ++  +I  F   G+  +A   + D    + 
Sbjct: 330 MNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 389

Query: 371 ----TSPHNALLEGCCNVENILIANRVLGRM-SKMSIDDCKSWNIVIGWLCNNARIGKAF 430
                  +N+L+ G      + +A  VL  M +K    +  S+ I++   C   +I +A+
Sbjct: 390 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 449

Query: 431 EFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYSELIESL 490
             L +M      PN   +  LI   CK  R   A+++  E+  +        ++ LI  L
Sbjct: 450 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 509

Query: 491 CQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKT 550
           C+      A  +   M       +   ++TLI      G I EA  L+    + G+    
Sbjct: 510 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 569

Query: 551 MTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNR 610
           +TY S++  L ++ + + A  +  +ML  G++ +  +  I I+  C    V++++     
Sbjct: 570 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 629

Query: 611 MVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLINGLWKEDR 670
           MV  G  PD      L+  +    ++   LT   KL       +T T+N L++ L K   
Sbjct: 630 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 689

Query: 671 KYEACKLLDSMLEKGWVPDAMTHGLLIGSLVNESSV 700
            Y+AC LLD  +E G+VP+  T  +L+ S++ + ++
Sbjct: 690 VYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720

[Close]
BLAST of CmaCh06G005410 vs. Swiss-Prot
Match: PPR99_ARATH (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 5.3e-45
Identity = 128/463 (27.65%), Postives = 221/463 (47.73%), Query Frame = 1 

Query: 156 VGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIK 215
           +G+  ++ T+++++  F   ++ +   L V  +M+K    P++ TLN LL    H  +I 
Sbjct: 110 LGISHNLYTYSILINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 169

Query: 216 TAMNQFRRMSKKGCVPNSKTFEVLLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAV 275
            A++   +M + G  P+S TF  L++GL   N   EAV  +  +   GC+ DL  Y   V
Sbjct: 170 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 229

Query: 276 SLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLR 335
           +  C+   ID+   L + M+   I P  +IY+T+I +LC    +++AL L  EM   G+R
Sbjct: 230 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 289

Query: 336 PKDDVYVGIIKVFFELGKTGEAIKFVKDRCFLFTSPH----NALLEGCCNVENILIANRV 395
           P    Y  +I+     G+  +A + + D      +P+    +AL++       ++ A ++
Sbjct: 290 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 349

Query: 396 LGRMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCK 455
              M K SID D  +++ +I   C + R+ +A      MI     PN  TY  LI G CK
Sbjct: 350 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 409

Query: 456 SRRYEAALQLMNEVHARCWVLHAVCYSELIESLCQAKRTLEAAEVFCYMSKNKYPLHPSL 515
           ++R +  ++L  E+  R  V + V Y+ LI    QA+    A  VF  M  +        
Sbjct: 410 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 469

Query: 516 FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTMTYASIVYELSKSNKAEIALLVLSQML 575
           +  L+ G+C+ G ++ ALV+ +    +       TY  ++  + K+ K E    +   + 
Sbjct: 470 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 529

Query: 576 VLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDS 614
           + G   N+ TY   +  FC     +++  LF  M  EG LPDS
Sbjct: 530 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571

[Close]
BLAST of CmaCh06G005410 vs. Swiss-Prot
Match: PP101_ARATH (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 6.9e-45
Identity = 128/463 (27.65%), Postives = 224/463 (48.38%), Query Frame = 1 

Query: 156 VGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIK 215
           +G+  ++ T+N+++  F   ++ I   L +  +M+K    P++ TL+ LL    H ++I 
Sbjct: 39  LGISHNLYTYNILINCFCRRSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 98

Query: 216 TAMNQFRRMSKKGCVPNSKTFEVLLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAV 275
            A+    +M + G  P++ TF  L++GL   N   EAV  +  + + GC+ +L  Y   V
Sbjct: 99  DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 158

Query: 276 SLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLR 335
           +  C+   ID+   L   M+A+ I  D +I++T+I SLCK   +D+AL L +EM   G+R
Sbjct: 159 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 218

Query: 336 PKDDVYVGIIKVFFELGKTGEAIKFVKDRCFLFTSPH----NALLEGCCNVENILIANRV 395
           P    Y  +I      G+  +A + + D      +P+    NAL++        + A ++
Sbjct: 219 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 278

Query: 396 LGRMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCK 455
              M K SID D  ++N +I   C + R+ KA +    M+     P+ DTY  LI G CK
Sbjct: 279 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 338

Query: 456 SRRYEAALQLMNEVHARCWVLHAVCYSELIESLCQAKRTLEAAEVFCYMSKNKYPLHPSL 515
           S+R E   +L  E+  R  V   V Y+ LI+ L        A +VF  M  +  P     
Sbjct: 339 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 398

Query: 516 FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTMTYASIVYELSKSNKAEIALLVLSQML 575
           +  L+ G+C+ G +++AL +      +        Y +++  + K+ K +    +   + 
Sbjct: 399 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 458

Query: 576 VLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDS 614
           + G   N+ TY   I   C+   ++++  L  +M  +G LPDS
Sbjct: 459 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500

[Close]
BLAST of CmaCh06G005410 vs. Swiss-Prot
Match: PPR94_ARATH (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 5.9e-44
Identity = 130/488 (26.64%), Postives = 235/488 (48.16%), Query Frame = 1 

Query: 133 LVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKA 192
           L++A  +  +    + +   +  +G+   + T+++ +  F   ++ +   L V  +M+K 
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ-LSLALAVLAKMMKL 148

Query: 193 SIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEVLLNGLITRNLVDEA 252
              P++ TL+ LL    H+++I  A+    +M + G  P++ TF  L++GL   N   EA
Sbjct: 149 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 208

Query: 253 VLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQS 312
           V  +  + + GC+ DL  Y   V+  C+   ID+   L + M+   I  D +IY+T+I  
Sbjct: 209 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 268

Query: 313 LCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEAIKFVKDRCFLFTSPH 372
           LCK   +D+AL L  EM   G+RP    Y  +I      G+  +A + + D      +P+
Sbjct: 269 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 328

Query: 373 ----NALLEGCCNVENILIANRVLGRMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLG 432
               +AL++       ++ A ++   M K SID D  +++ +I   C + R+ +A     
Sbjct: 329 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 388

Query: 433 KMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYSELIESLCQAK 492
            MI     PN  TY+ LI G CK++R E  ++L  E+  R  V + V Y+ LI    QA+
Sbjct: 389 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 448

Query: 493 RTLEAAEVFCYMSKNKYPLHPSL--FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTMT 552
               A  VF  M      +HP++  ++ L+ G+C  G + +A+V+ +    +       T
Sbjct: 449 DCDNAQMVFKQMV--SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 508

Query: 553 YASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMV 612
           Y  ++  + K+ K E    +   + + G S N+  Y   I  FC     +++ +L  +M 
Sbjct: 509 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 568

Query: 613 NEGLLPDS 614
            +G LP+S
Sbjct: 569 EDGPLPNS 573

[Close]
BLAST of CmaCh06G005410 vs. Swiss-Prot
Match: PP102_ARATH (Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.7e-43
Identity = 130/465 (27.96%), Postives = 228/465 (49.03%), Query Frame = 1 

Query: 156 VGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIK 215
           +G+  ++ T+N+++  F   ++ I   L +  +M+K    P++ TL+ LL    H ++I 
Sbjct: 114 LGISHNLYTYNILINCFCRRSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 173

Query: 216 TAMNQFRRMSKKGCVPNSKTFEVLLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAV 275
            A+    +M + G  P++ TF  L++GL   N   EAV  +  + + GC+ +L  Y   V
Sbjct: 174 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 233

Query: 276 SLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLR 335
           +  C+   ID+   L   M+A+ I  + +IYST+I SLCK    D+AL L  EM   G+R
Sbjct: 234 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 293

Query: 336 PKDDVYVGIIKVFFELGKTGEAIKFVKDRCFLFTSPH----NALLEGCCNVENILIANRV 395
           P    Y  +I       +  +A + + D      +P+    NAL++       ++ A ++
Sbjct: 294 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 353

Query: 396 LGRMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCK 455
              M K SID D  +++ +I   C + R+ +A      MI     PN  TY  LI G CK
Sbjct: 354 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 413

Query: 456 SRRYEAALQLMNEVHARCWVLHAVCYSELIESLCQAKRTLEAAEVFCYMSKNKYPLHPSL 515
           ++R +  ++L  E+  R  V + V Y+ LI    QA+    A  VF  M  +   +HP++
Sbjct: 414 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD--GVHPNI 473

Query: 516 --FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTMTYASIVYELSKSNKAEIALLVLSQ 575
             ++TL+ G+C  G +++A+V+ +    +       TY  ++  + K+ K E    +   
Sbjct: 474 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 533

Query: 576 MLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDS 614
           + + G   ++  Y   I  FC     +++  LF +M  +G LPDS
Sbjct: 534 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575

[Close]
BLAST of CmaCh06G005410 vs. TrEMBL
Match: A0A0A0LE83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782810 PE=4 SV=1)

HSP 1 Score: 1166.4 bits (3016), Expect = 0.0e+00
Identity = 590/728 (81.04%), Postives = 653/728 (89.70%), Query Frame = 1 

Query: 1   MAARLMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEESTQSLNNKFVLN 60
           MAARLMPSTLMKKFLKGV PNSCLSPILSG +VD+FLENNQ+ PRL++STQ L++K V N
Sbjct: 1   MAARLMPSTLMKKFLKGVVPNSCLSPILSGIHVDTFLENNQNCPRLKQSTQFLSDKSVSN 60

Query: 61  NSV---KGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQD 120
           NSV   KGLD + NLNSEVEIFK LAIQKG   +VQTYY TILK GLDGN+EEM+ TC+D
Sbjct: 61  NSVNSVKGLDYDKNLNSEVEIFKSLAIQKGIFQSVQTYYETILKLGLDGNIEEMEMTCRD 120

Query: 121 LVKDGCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENR 180
           LV +GC GVEEVIVTLVN  VR GR REALRVLPH++LVGL+PS+ETFNVVLAV VEE+R
Sbjct: 121 LVNEGCSGVEEVIVTLVNTLVRRGRVREALRVLPHISLVGLRPSVETFNVVLAVLVEEDR 180

Query: 181 DIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFE 240
           DI+EVLFVYKEMVKA IVPNVDTLNFLLAALFHAEQIKTAMNQFRRM KKGC PNSKTFE
Sbjct: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFE 240

Query: 241 VLLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKAS 300
           VL+NGLIT+NLVDEAVL LGI+YKI CEL LSFYTCA+SLFCR DRIDVGSWLF MMKAS
Sbjct: 241 VLVNGLITKNLVDEAVLVLGIMYKIRCELHLSFYTCAISLFCREDRIDVGSWLFTMMKAS 300

Query: 301 NIIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEA 360
           NI+P TLIYSTLIQSLCK+L LD+ALFLLEEM E+GL P++ VYV I++VFFELGKT EA
Sbjct: 301 NIVPGTLIYSTLIQSLCKSLSLDKALFLLEEMVENGLIPEESVYVSIVEVFFELGKTDEA 360

Query: 361 IKFVKDRCFLFTSPHNALLEGCCNVENILIANRVLGRMSKMSIDDCKSWNIVIGWLCNNA 420
           IKFV+DRC  +TSPHNALLEGC N   IL+AN +LG+MSKM+IDDCKSWNIVIGWLCNNA
Sbjct: 361 IKFVEDRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNA 420

Query: 421 RIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYS 480
           +IG AFEFLGKMIVLSFVPN+DTYAALI+GNCKSRRYEAALQLMNEVH+RCW+L+A CYS
Sbjct: 421 KIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEAALQLMNEVHSRCWILNAGCYS 480

Query: 481 ELIESLCQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYA 540
           ELIE LCQA RTLEAAEVFC+MSKN++PLHPSLFDTLIKG+CDLGH+DEALVLLQLA YA
Sbjct: 481 ELIEGLCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKGMCDLGHVDEALVLLQLASYA 540

Query: 541 GTSCKTMTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDS 600
           GTSCK++TYASI++ELSKSNKAE ALLVLSQMLVLG +L+LETY I IHSF ++NRVK+S
Sbjct: 541 GTSCKSVTYASIIHELSKSNKAETALLVLSQMLVLGCNLDLETYYILIHSFSSINRVKES 600

Query: 601 ITLFNRMVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLING 660
           I LFN MVNE LLPDSERLYDL LCIA+HSQLHMI TTIDKL+ HTDLVNTATYNLLING
Sbjct: 601 ILLFNHMVNEALLPDSERLYDLFLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLING 660

Query: 661 LWKEDRKYEACKLLDSMLEKGWVPDAMTHGLLIGS----------LVNESSVIEDNVSSI 716
           LWKEDRKYEACKLLDSMLEKGWVPDA THGLLIGS          L++E+S IEDNVSSI
Sbjct: 661 LWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDKVLISENSAIEDNVSSI 720

[Close]
BLAST of CmaCh06G005410 vs. TrEMBL
Match: M5WJY3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002033mg PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 1.1e-198
Identity = 362/722 (50.14%), Postives = 498/722 (68.98%), Query Frame = 1 

Query: 7   PSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPR---LEESTQSLNNKFVLNNSV 66
           P T  K+    V   +C+S       V+ F   NQ  P     E++ QSL NK V +N +
Sbjct: 4   PLTFSKRIPFWVCSGACISSASCAKTVECFPGKNQDPPNSSDFEQNIQSLRNKLVPDNLI 63

Query: 67  KGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGC 126
           + LDN ++L+S V++FK  ++Q+ F+HT  TYY  ILK GL G VEEM+  CQ++VKD C
Sbjct: 64  RVLDNTDDLSSAVKVFKWASLQRRFNHTADTYYRIILKLGLAGKVEEMEGFCQNMVKDKC 123

Query: 127 LGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVL 186
            GVEE ++ LV+ FV+H R  EA+RVL ++   G +PSIETFN VL   VE+ RD ++VL
Sbjct: 124 PGVEEALLALVDMFVKHCRQSEAIRVLVNMKAGGYRPSIETFNAVLGALVEDKRDFQDVL 183

Query: 187 FVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEVLLNGL 246
           FVYKEMV A I+P ++TLN+LL AL   + I++A+ Q+RRM KKGC PN +TFE+L+   
Sbjct: 184 FVYKEMVTAGILPTIETLNYLLEALLETDHIESALGQYRRMKKKGCSPNCRTFEILIKAH 243

Query: 247 ITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDT 306
           I +  VDEAV+ L  + ++GC+ DLSFY+  + LFC+ +R + G  LF MM+ASN +PD+
Sbjct: 244 IAKGRVDEAVIVLSEMLELGCQPDLSFYSTLIPLFCQNNRPEEGIRLFEMMRASNFMPDS 303

Query: 307 LIYSTLIQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEAIKFVKD 366
           LI   L+Q LCKNL L++A+ +LE+M E+GL P +DV+  ++ VF +LGK  +A+KF++D
Sbjct: 304 LICGVLLQCLCKNLCLNDAIKVLEDMMETGLTPANDVFADVVNVFCKLGKIDDAMKFLED 363

Query: 367 RCFLFTSPHNALLEGCCNVENILIANRVLGRMSKMSIDDCKSWNIVIGWLCNNARIGKAF 426
           +  L TS  N LLEGCC+    L+A  +L +MS+  + DC SWNI+I WLC N+RI  A 
Sbjct: 364 KHILETSVCNVLLEGCCSAGKFLMAKDLLVKMSESDVADCNSWNILIRWLCENSRIRVAS 423

Query: 427 EFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYSELIESL 486
           E LG+M+V S +P+  TY+AL+IGNCK   Y  AL L + + A+ WVL    YSEL++ L
Sbjct: 424 EILGRMVVSSSLPDCATYSALVIGNCKMSNYRNALDLFHHIRAKSWVLDPTSYSELVKGL 483

Query: 487 CQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKT 546
           C  + T EA EVFCYMS N+  +  S F+ LIKG+C+ G +DEA+ L +LA Y+GTS  +
Sbjct: 484 CLVEMTHEATEVFCYMSSNRCSIQSSSFNMLIKGVCETGKVDEAIRLQKLAYYSGTSSTS 543

Query: 547 MTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNR 606
            TY++I++ LSK + A+  L+VLS+MLV G +L+L+ YCI I S    NRVK+ I LF  
Sbjct: 544 STYSAIMFGLSKVDNAKDLLVVLSKMLVEGCNLDLDAYCILIQSMSLQNRVKECILLFRM 603

Query: 607 MVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLINGLWKEDR 666
           MVN+GL+PDSERL++LL CIA+ SQLH+I  +IDKL   ++ +N+A YN+LINGLWKE  
Sbjct: 604 MVNKGLIPDSERLFNLLSCIANLSQLHVISDSIDKLASSSEALNSAIYNVLINGLWKEGY 663

Query: 667 KYEACKLLDSMLEKGWVPDAMTHGLLIGSLVNE----------SSVIEDNVSSILVEGLG 716
           K+EAC+LLD MLEKGWVPDA THGLLIGS V+E          +  ++D VS+ILVEGL 
Sbjct: 664 KHEACRLLDIMLEKGWVPDAKTHGLLIGSAVSEEVDWNVLDYDNCTVQDTVSNILVEGLD 723

[Close]
BLAST of CmaCh06G005410 vs. TrEMBL
Match: B9N416_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s00500g PE=4 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 1.9e-195
Identity = 357/724 (49.31%), Postives = 489/724 (67.54%), Query Frame = 1 

Query: 5   LMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEE---STQSLNNKFVLNN 64
           L PST +K+  K V   + +S +   N +    E NQ+ P   +     QSL NK   +N
Sbjct: 2   LSPSTFLKRIPKWVNLKAFISSVSCTNTIQINPEINQNTPNFPDFDVKIQSLRNKLYPDN 61

Query: 65  SVKGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKD 124
            +K L + +++NS V+IFK  A+Q+ F+HT  TYY  I K G+ GNVEEM+  CQ++VK+
Sbjct: 62  LIKVLKSTSDVNSAVKIFKWAALQRKFNHTADTYYWIIFKLGMAGNVEEMEGFCQNMVKE 121

Query: 125 GCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEE 184
            C G E+V+V+LV+AFVR+ R  EA+RVL ++NL G+KPSI+ FN VL   VEE R  ++
Sbjct: 122 RCTGEEDVLVSLVDAFVRNCRLNEAMRVLFNMNLAGIKPSIDVFNFVLGALVEEKRGFQD 181

Query: 185 VLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEVLLN 244
           V+FVYKEMVKA + P++DTLN+LL  LF  +++ +A++Q+RR++KKGC P+ KTFE+++ 
Sbjct: 182 VVFVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKGCRPDGKTFEIVIK 241

Query: 245 GLITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIP 304
           GLI  + VD++V  L  + ++GC  +LSFY   + LFCR DR++ G  LFR MK SN  P
Sbjct: 242 GLIANDRVDDSVSILHEMLELGCLPELSFYRTTIPLFCREDRLEEGIRLFRKMKESNFTP 301

Query: 305 DTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEAIKFV 364
           D+ IY  LIQ LCK L LDEA+ LLEEM ES L   ++V+V ++  F +LGK  EA+K +
Sbjct: 302 DSFIYGALIQCLCKQLRLDEAVNLLEEMMESQLEGDNNVFVDVVNGFCKLGKINEAVKLL 361

Query: 365 KDRCFLFTSPHNALLEGCCNVENILIANRVLGRMSKMSIDDCKSWNIVIGWLCNNARIGK 424
           +D+  L TSPHNALL  CC+ +  L+A  +L +MS+ +IDDC SWNI+I WLC    + K
Sbjct: 362 EDKHVLETSPHNALLRCCCDADKFLMAKGLLEKMSERNIDDCDSWNILIRWLCEREEMVK 421

Query: 425 AFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYSELIE 484
           A+E LG+MI+ S +P+  TY+AL+ GNC+  +YE ALQL  ++HA+CW+L    YSELIE
Sbjct: 422 AYELLGRMIISSLIPDYATYSALVAGNCRLSKYEDALQLFLQLHAKCWILDPASYSELIE 481

Query: 485 SLCQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSC 544
            LC+ ++ LEA +VFCYMS+N+  L    F  LIKGICD+G I EA+ L  LA  +GTSC
Sbjct: 482 GLCRGEKYLEAVKVFCYMSENRCSLQSLPFIMLIKGICDMGMIGEAVRLQSLAYNSGTSC 541

Query: 545 KTMTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLF 604
              TY  ++  LSKS +    L  LS+MLV G +LN E YCI I S  A NR+KD     
Sbjct: 542 VNATYNYVMLRLSKSEQGRHVLAFLSRMLVQGGNLNTEAYCILIQSLIAQNRIKDCSMFL 601

Query: 605 NRMVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLINGLWKE 664
           N M+N+GL+PDS+ LY+LL C+A HSQL++I  ++DKL    +++++A YN+LING+WKE
Sbjct: 602 NVMINKGLVPDSDTLYNLLSCLAKHSQLYLISVSLDKLASDCEVLDSAMYNILINGMWKE 661

Query: 665 DRKYEACKLLDSMLEKGWVPDAMTHGLLIGSLVNESS----------VIEDNVSSILVEG 716
             K +A +LLD MLEKGWVPDAMTHGLLIGS   E              +D V  IL EG
Sbjct: 662 GNKNDARRLLDLMLEKGWVPDAMTHGLLIGSADMEEKGEGMLAYVDLSTKDGVGDILAEG 721

[Close]
BLAST of CmaCh06G005410 vs. TrEMBL
Match: B9I6D0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s00430g PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 7.7e-192
Identity = 354/723 (48.96%), Postives = 492/723 (68.05%), Query Frame = 1 

Query: 5   LMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEE---STQSLNNKFVLNN 64
           L PSTL K   K +   S +S +   N +    E NQ+ P + +     QSL NK   + 
Sbjct: 2   LSPSTLSKTIPKWLNLKSFISSVSCTNAIQINPEINQNAPNITDFDAKIQSLRNKLCPDY 61

Query: 65  SVKGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKD 124
            +K L + +++NS V++FK  ++Q+ F+HT  TYY  I K G+  NVEEM+  CQ++VKD
Sbjct: 62  LIKVLKSTSDINSAVKLFKWASLQRRFNHTDDTYYWIIFKLGMAENVEEMEGFCQNMVKD 121

Query: 125 GCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEE 184
            C GVE+V+++LV+AFVR+ R  EALRVL ++NL G+KPSI+ FN VL   VEE R  ++
Sbjct: 122 RCPGVEDVLLSLVDAFVRNCRLNEALRVLFNMNLAGIKPSIDVFNFVLGALVEEKRGFQD 181

Query: 185 VLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEVLLN 244
           V+FVYKEMVKA + P++DTLN+LL  LF  +++ +A++Q+RR++KKGC+PNS+TFE+++ 
Sbjct: 182 VVFVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKGCIPNSRTFEIVIK 241

Query: 245 GLITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIP 304
           GLI +N VD++V  L  + ++GC  +L F+   + LFC  DR+  G  LFR MK SN  P
Sbjct: 242 GLIAKNRVDDSVTILHEMLELGCLPELRFFRSTILLFCGEDRLQQGIRLFRKMKDSNFTP 301

Query: 305 DTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEAIKFV 364
           D  IY  LIQ LCK+L LDEA  LLEEM ES L P ++V+V I+  F +LGK  EAIK +
Sbjct: 302 DPFIYGALIQCLCKHLRLDEAANLLEEMMESRLTPDNNVFVDIVNGFCKLGKINEAIKLL 361

Query: 365 KDRCFLFTSPHNALLEGCCNVENILIANRVLGRMSKMSIDDCKSWNIVIGWLCNNARIGK 424
           +D+    TSPHNALL  CC+ +   +A  +L +MS+ +IDDC SWNI+I WLC    +  
Sbjct: 362 EDKHVHVTSPHNALLRCCCDADKFFMAKGLLEKMSERNIDDCDSWNILIRWLCEKVGVMN 421

Query: 425 AFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYSELIE 484
           A+E LG+MI+ S +P+  TY+AL+ GNC+  +YE ALQL  ++HA+ W+L    YSELIE
Sbjct: 422 AYELLGRMIISSLIPDCATYSALVAGNCRLSKYEDALQLFLQLHAKFWILDPASYSELIE 481

Query: 485 SLCQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSC 544
            LC+ ++ LEA +VFCYMS+N+  L    F+ LI+G+C++G ++EA+ L  L   +GTSC
Sbjct: 482 GLCRGEKYLEAVKVFCYMSENRCSLQSLSFNMLIEGVCNMGMLNEAVRLQLLGYNSGTSC 541

Query: 545 KTMTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLF 604
              T   I+  LSKS+K +  L  LSQMLV G +L++E YCI I S  A  ++KD     
Sbjct: 542 SNATCNYIMLGLSKSDKGKHMLAFLSQMLVQGTNLDMEAYCILIQSMIAQKQIKDCTLFL 601

Query: 605 NRMVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLINGLWKE 664
           N MVNEGL+PDS+ LY LL C+A+HSQL++I  ++DKL+   +++++A YN+LINGLWKE
Sbjct: 602 NVMVNEGLVPDSDTLYKLLSCLANHSQLYLISLSLDKLVSDCEVLDSAMYNILINGLWKE 661

Query: 665 DRKYEACKLLDSMLEKGWVPDAMTHGLLIGSLVNESS---------VIEDNVSSILVEGL 716
             K EA +LLD MLEKGWVPD+MTHGLLIGS   E +          I+D+VS ILVEGL
Sbjct: 662 GNKNEAHRLLDLMLEKGWVPDSMTHGLLIGSGNREGTGKGKLTYVDSIKDSVSDILVEGL 721

[Close]
BLAST of CmaCh06G005410 vs. TrEMBL
Match: A0A061FBA6_THECC (Pentatricopeptide repeat superfamily protein, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_026836 PE=4 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 4.6e-189
Identity = 341/699 (48.78%), Postives = 467/699 (66.81%), Query Frame = 1 

Query: 31  NYVDSFLENNQSNPR------LEESTQSLNNKFVLNNSVKGLDNENNLNSEVEIFKCLAI 90
           +Y ++ L N++++P        E   + L N    ++ ++ LD   +LNS ++IFK  A+
Sbjct: 27  SYANTVLLNSETDPNPPYVDDFEAKIKFLRNNLYPDSLIRVLDKTQDLNSALKIFKWAAL 86

Query: 91  QKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGCLGVEEVIVTLVNAFVRHGRTR 150
           QK F+HT  TYY  ILK GL GN+ EMD  C +  +D C G EE +  L++ FVRH R  
Sbjct: 87  QKRFNHTANTYYHIILKLGLAGNITEMDHFCLNWARDKCAGTEEALTVLIDTFVRHSRLN 146

Query: 151 EALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTLNFL 210
           EA RVL H+ L G  PS+  FN +L  FV+E RD + VLFVYKEMVKA ++P VDTLN L
Sbjct: 147 EASRVLVHMTLGGYNPSVNVFNDLLGAFVKEKRDFQHVLFVYKEMVKAGVLPTVDTLNSL 206

Query: 211 LAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEVLLNGLITRNLVDEAVLALGILYKIGC 270
           L  LF   ++++ ++QFRRM KKGC P+ +TFE+++ GLI    VDEAVL L  + ++GC
Sbjct: 207 LDVLFETNRVESGLDQFRRMRKKGCSPSGRTFEIVIKGLIVNGRVDEAVLILDEMLELGC 266

Query: 271 ELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDEALF 330
             D+ FYTC V LFC+ +R++ G  LFR+M+ASN++PD+LI   LI+ LC NL LD+A  
Sbjct: 267 SPDMGFYTCIVPLFCQENRLEQGMQLFRLMRASNLVPDSLICRKLIRCLCMNLHLDDATN 326

Query: 331 LLEEMAESGLRPKDDVYVGIIKVFFELGKTGEAIKFVKDRCFLFTSPHNALLEGCCNVEN 390
           +L+EM E G  P  D +V I+  F E  K  EAI F+++ C   TSPH ALLEGCC    
Sbjct: 327 VLQEMIEIGEIPPADSFVDIVNGFCEGEKYIEAIHFLENNCGNLTSPHKALLEGCCRAGK 386

Query: 391 ILIANRVLGRMSKMSIDDCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTYAAL 450
             +   +L +MS+  I DC SWNI+I W+C    I KA E LG+MIV S VP+  TYAAL
Sbjct: 387 FFLGKDLLEKMSEGGIADCDSWNILIRWICEKVGIKKANELLGRMIVQSLVPDCGTYAAL 446

Query: 451 IIGNCKSRRYEAALQLMNEVHARCWVLHAVCYSELIESLCQAKRTLEAAEVFCYMSKNKY 510
           ++GNCK  +YE AL L   +H++CWVL ++CYS L+E+LC+ ++  EA EV+ YMSK+  
Sbjct: 447 VVGNCKLNKYEDALGLFYYIHSKCWVLDSICYSRLVEALCRLEKITEAVEVYYYMSKSGC 506

Query: 511 PLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKTMTYASIVYELSKSNKAEIALL 570
            L  + F+ LIK  CD+G +DEA+ +  LA Y+GTSC ++TY +I+  L KS +A+  L+
Sbjct: 507 LLEATAFNMLIKAACDVGKVDEAIKMRSLAYYSGTSCTSLTYTTIMLGLHKSERAKDVLV 566

Query: 571 VLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDSERLYDLLLCIA 630
           ++SQML+ G ++N E YCI I S   +NR K+    F  M+NEGL+PDSE ++DLL C+A
Sbjct: 567 MVSQMLIGGCAINAEAYCILIRSMSTLNRFKECALFFKLMLNEGLMPDSEAMHDLLSCLA 626

Query: 631 DHSQLHMILTTIDKLIEHTDLVNTATYNLLINGLWKEDRKYEACKLLDSMLEKGWVPDAM 690
           +HSQLH++   I+K+I   +++ +A YNLLINGLWKE  K EAC LLD MLEKGWVPDA 
Sbjct: 627 NHSQLHLLSKDINKIISRMEILESAMYNLLINGLWKEGCKSEACLLLDLMLEKGWVPDAT 686

Query: 691 THGLLIGSLV----------NESSVIEDNVSSILVEGLG 714
           TH LLIGS V          +E+S+ +DNVS+IL EGLG
Sbjct: 687 THTLLIGSNVKEVTSRGTTMHENSMEQDNVSNILAEGLG 725

[Close]
BLAST of CmaCh06G005410 vs. TAIR10
Match: AT5G64320.1 (AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 202.6 bits (514), Expect = 8.1e-52
Identity = 154/636 (24.21%), Postives = 292/636 (45.91%), Query Frame = 1 

Query: 71  NLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVKDGCLGVEEVI 130
           N+++ +E+F     Q G+ H+   Y V I K G +G  + +DR    +  +G +  E + 
Sbjct: 90  NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149

Query: 131 VTLVNAFVRHGRTREALRVLPHV-NLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEM 190
           ++++  + + G   +  R++  + N+   +P+ +++NVVL + V  N   +    V+ +M
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCH-KVAANVFYDM 209

Query: 191 VKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEVLLNGLITRNLV 250
           +   I P + T   ++ A     +I +A++  R M+K GCVPNS  ++ L++ L   N V
Sbjct: 210 LSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 269

Query: 251 DEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTL 310
           +EA+  L  ++ +GC  D   +   +   C+ DRI+  + +   M      PD + Y  L
Sbjct: 270 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 329

Query: 311 IQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEAIKFVKDRCFLF- 370
           +  LCK   +D A  L   +     +P+  ++  +I  F   G+  +A   + D    + 
Sbjct: 330 MNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 389

Query: 371 ----TSPHNALLEGCCNVENILIANRVLGRM-SKMSIDDCKSWNIVIGWLCNNARIGKAF 430
                  +N+L+ G      + +A  VL  M +K    +  S+ I++   C   +I +A+
Sbjct: 390 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 449

Query: 431 EFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYSELIESL 490
             L +M      PN   +  LI   CK  R   A+++  E+  +        ++ LI  L
Sbjct: 450 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 509

Query: 491 CQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTSCKT 550
           C+      A  +   M       +   ++TLI      G I EA  L+    + G+    
Sbjct: 510 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 569

Query: 551 MTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNR 610
           +TY S++  L ++ + + A  +  +ML  G++ +  +  I I+  C    V++++     
Sbjct: 570 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 629

Query: 611 MVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLINGLWKEDR 670
           MV  G  PD      L+  +    ++   LT   KL       +T T+N L++ L K   
Sbjct: 630 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 689

Query: 671 KYEACKLLDSMLEKGWVPDAMTHGLLIGSLVNESSV 700
            Y+AC LLD  +E G+VP+  T  +L+ S++ + ++
Sbjct: 690 VYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720

[Close]
BLAST of CmaCh06G005410 vs. TAIR10
Match: AT1G63130.1 (AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 184.1 bits (466), Expect = 3.0e-46
Identity = 128/463 (27.65%), Postives = 221/463 (47.73%), Query Frame = 1 

Query: 156 VGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIK 215
           +G+  ++ T+++++  F   ++ +   L V  +M+K    P++ TLN LL    H  +I 
Sbjct: 110 LGISHNLYTYSILINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 169

Query: 216 TAMNQFRRMSKKGCVPNSKTFEVLLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAV 275
            A++   +M + G  P+S TF  L++GL   N   EAV  +  +   GC+ DL  Y   V
Sbjct: 170 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 229

Query: 276 SLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLR 335
           +  C+   ID+   L + M+   I P  +IY+T+I +LC    +++AL L  EM   G+R
Sbjct: 230 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 289

Query: 336 PKDDVYVGIIKVFFELGKTGEAIKFVKDRCFLFTSPH----NALLEGCCNVENILIANRV 395
           P    Y  +I+     G+  +A + + D      +P+    +AL++       ++ A ++
Sbjct: 290 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 349

Query: 396 LGRMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCK 455
              M K SID D  +++ +I   C + R+ +A      MI     PN  TY  LI G CK
Sbjct: 350 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 409

Query: 456 SRRYEAALQLMNEVHARCWVLHAVCYSELIESLCQAKRTLEAAEVFCYMSKNKYPLHPSL 515
           ++R +  ++L  E+  R  V + V Y+ LI    QA+    A  VF  M  +        
Sbjct: 410 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 469

Query: 516 FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTMTYASIVYELSKSNKAEIALLVLSQML 575
           +  L+ G+C+ G ++ ALV+ +    +       TY  ++  + K+ K E    +   + 
Sbjct: 470 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 529

Query: 576 VLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDS 614
           + G   N+ TY   +  FC     +++  LF  M  EG LPDS
Sbjct: 530 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571

[Close]
BLAST of CmaCh06G005410 vs. TAIR10
Match: AT1G63330.1 (AT1G63330.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 183.7 bits (465), Expect = 3.9e-46
Identity = 128/463 (27.65%), Postives = 224/463 (48.38%), Query Frame = 1 

Query: 156 VGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIK 215
           +G+  ++ T+N+++  F   ++ I   L +  +M+K    P++ TL+ LL    H ++I 
Sbjct: 39  LGISHNLYTYNILINCFCRRSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 98

Query: 216 TAMNQFRRMSKKGCVPNSKTFEVLLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAV 275
            A+    +M + G  P++ TF  L++GL   N   EAV  +  + + GC+ +L  Y   V
Sbjct: 99  DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 158

Query: 276 SLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLR 335
           +  C+   ID+   L   M+A+ I  D +I++T+I SLCK   +D+AL L +EM   G+R
Sbjct: 159 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 218

Query: 336 PKDDVYVGIIKVFFELGKTGEAIKFVKDRCFLFTSPH----NALLEGCCNVENILIANRV 395
           P    Y  +I      G+  +A + + D      +P+    NAL++        + A ++
Sbjct: 219 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 278

Query: 396 LGRMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCK 455
              M K SID D  ++N +I   C + R+ KA +    M+     P+ DTY  LI G CK
Sbjct: 279 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 338

Query: 456 SRRYEAALQLMNEVHARCWVLHAVCYSELIESLCQAKRTLEAAEVFCYMSKNKYPLHPSL 515
           S+R E   +L  E+  R  V   V Y+ LI+ L        A +VF  M  +  P     
Sbjct: 339 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 398

Query: 516 FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTMTYASIVYELSKSNKAEIALLVLSQML 575
           +  L+ G+C+ G +++AL +      +        Y +++  + K+ K +    +   + 
Sbjct: 399 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 458

Query: 576 VLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDS 614
           + G   N+ TY   I   C+   ++++  L  +M  +G LPDS
Sbjct: 459 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500

[Close]
BLAST of CmaCh06G005410 vs. TAIR10
Match: AT1G62910.1 (AT1G62910.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 180.6 bits (457), Expect = 3.3e-45
Identity = 130/488 (26.64%), Postives = 235/488 (48.16%), Query Frame = 1 

Query: 133 LVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKA 192
           L++A  +  +    + +   +  +G+   + T+++ +  F   ++ +   L V  +M+K 
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ-LSLALAVLAKMMKL 148

Query: 193 SIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEVLLNGLITRNLVDEA 252
              P++ TL+ LL    H+++I  A+    +M + G  P++ TF  L++GL   N   EA
Sbjct: 149 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 208

Query: 253 VLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQS 312
           V  +  + + GC+ DL  Y   V+  C+   ID+   L + M+   I  D +IY+T+I  
Sbjct: 209 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 268

Query: 313 LCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEAIKFVKDRCFLFTSPH 372
           LCK   +D+AL L  EM   G+RP    Y  +I      G+  +A + + D      +P+
Sbjct: 269 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 328

Query: 373 ----NALLEGCCNVENILIANRVLGRMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLG 432
               +AL++       ++ A ++   M K SID D  +++ +I   C + R+ +A     
Sbjct: 329 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 388

Query: 433 KMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYSELIESLCQAK 492
            MI     PN  TY+ LI G CK++R E  ++L  E+  R  V + V Y+ LI    QA+
Sbjct: 389 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 448

Query: 493 RTLEAAEVFCYMSKNKYPLHPSL--FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTMT 552
               A  VF  M      +HP++  ++ L+ G+C  G + +A+V+ +    +       T
Sbjct: 449 DCDNAQMVFKQMV--SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 508

Query: 553 YASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMV 612
           Y  ++  + K+ K E    +   + + G S N+  Y   I  FC     +++ +L  +M 
Sbjct: 509 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 568

Query: 613 NEGLLPDS 614
            +G LP+S
Sbjct: 569 EDGPLPNS 573

[Close]
BLAST of CmaCh06G005410 vs. TAIR10
Match: AT1G63400.1 (AT1G63400.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 179.1 bits (453), Expect = 9.6e-45
Identity = 130/465 (27.96%), Postives = 228/465 (49.03%), Query Frame = 1 

Query: 156 VGLKPSIETFNVVLAVFVEENRDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIK 215
           +G+  ++ T+N+++  F   ++ I   L +  +M+K    P++ TL+ LL    H ++I 
Sbjct: 114 LGISHNLYTYNILINCFCRRSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 173

Query: 216 TAMNQFRRMSKKGCVPNSKTFEVLLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAV 275
            A+    +M + G  P++ TF  L++GL   N   EAV  +  + + GC+ +L  Y   V
Sbjct: 174 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 233

Query: 276 SLFCRVDRIDVGSWLFRMMKASNIIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLR 335
           +  C+   ID+   L   M+A+ I  + +IYST+I SLCK    D+AL L  EM   G+R
Sbjct: 234 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 293

Query: 336 PKDDVYVGIIKVFFELGKTGEAIKFVKDRCFLFTSPH----NALLEGCCNVENILIANRV 395
           P    Y  +I       +  +A + + D      +P+    NAL++       ++ A ++
Sbjct: 294 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 353

Query: 396 LGRMSKMSID-DCKSWNIVIGWLCNNARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCK 455
              M K SID D  +++ +I   C + R+ +A      MI     PN  TY  LI G CK
Sbjct: 354 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 413

Query: 456 SRRYEAALQLMNEVHARCWVLHAVCYSELIESLCQAKRTLEAAEVFCYMSKNKYPLHPSL 515
           ++R +  ++L  E+  R  V + V Y+ LI    QA+    A  VF  M  +   +HP++
Sbjct: 414 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD--GVHPNI 473

Query: 516 --FDTLIKGICDLGHIDEALVLLQLACYAGTSCKTMTYASIVYELSKSNKAEIALLVLSQ 575
             ++TL+ G+C  G +++A+V+ +    +       TY  ++  + K+ K E    +   
Sbjct: 474 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 533

Query: 576 MLVLGYSLNLETYCIFIHSFCAMNRVKDSITLFNRMVNEGLLPDS 614
           + + G   ++  Y   I  FC     +++  LF +M  +G LPDS
Sbjct: 534 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575

[Close]
BLAST of CmaCh06G005410 vs. NCBI nr
Match: gi|449437884|ref|XP_004136720.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 1166.4 bits (3016), Expect = 0.0e+00
Identity = 590/728 (81.04%), Postives = 653/728 (89.70%), Query Frame = 1 

Query: 1   MAARLMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEESTQSLNNKFVLN 60
           MAARLMPSTLMKKFLKGV PNSCLSPILSG +VD+FLENNQ+ PRL++STQ L++K V N
Sbjct: 1   MAARLMPSTLMKKFLKGVVPNSCLSPILSGIHVDTFLENNQNCPRLKQSTQFLSDKSVSN 60

Query: 61  NSV---KGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQD 120
           NSV   KGLD + NLNSEVEIFK LAIQKG   +VQTYY TILK GLDGN+EEM+ TC+D
Sbjct: 61  NSVNSVKGLDYDKNLNSEVEIFKSLAIQKGIFQSVQTYYETILKLGLDGNIEEMEMTCRD 120

Query: 121 LVKDGCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENR 180
           LV +GC GVEEVIVTLVN  VR GR REALRVLPH++LVGL+PS+ETFNVVLAV VEE+R
Sbjct: 121 LVNEGCSGVEEVIVTLVNTLVRRGRVREALRVLPHISLVGLRPSVETFNVVLAVLVEEDR 180

Query: 181 DIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFE 240
           DI+EVLFVYKEMVKA IVPNVDTLNFLLAALFHAEQIKTAMNQFRRM KKGC PNSKTFE
Sbjct: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFE 240

Query: 241 VLLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKAS 300
           VL+NGLIT+NLVDEAVL LGI+YKI CEL LSFYTCA+SLFCR DRIDVGSWLF MMKAS
Sbjct: 241 VLVNGLITKNLVDEAVLVLGIMYKIRCELHLSFYTCAISLFCREDRIDVGSWLFTMMKAS 300

Query: 301 NIIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEA 360
           NI+P TLIYSTLIQSLCK+L LD+ALFLLEEM E+GL P++ VYV I++VFFELGKT EA
Sbjct: 301 NIVPGTLIYSTLIQSLCKSLSLDKALFLLEEMVENGLIPEESVYVSIVEVFFELGKTDEA 360

Query: 361 IKFVKDRCFLFTSPHNALLEGCCNVENILIANRVLGRMSKMSIDDCKSWNIVIGWLCNNA 420
           IKFV+DRC  +TSPHNALLEGC N   IL+AN +LG+MSKM+IDDCKSWNIVIGWLCNNA
Sbjct: 361 IKFVEDRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNA 420

Query: 421 RIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYS 480
           +IG AFEFLGKMIVLSFVPN+DTYAALI+GNCKSRRYEAALQLMNEVH+RCW+L+A CYS
Sbjct: 421 KIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEAALQLMNEVHSRCWILNAGCYS 480

Query: 481 ELIESLCQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYA 540
           ELIE LCQA RTLEAAEVFC+MSKN++PLHPSLFDTLIKG+CDLGH+DEALVLLQLA YA
Sbjct: 481 ELIEGLCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKGMCDLGHVDEALVLLQLASYA 540

Query: 541 GTSCKTMTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDS 600
           GTSCK++TYASI++ELSKSNKAE ALLVLSQMLVLG +L+LETY I IHSF ++NRVK+S
Sbjct: 541 GTSCKSVTYASIIHELSKSNKAETALLVLSQMLVLGCNLDLETYYILIHSFSSINRVKES 600

Query: 601 ITLFNRMVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLING 660
           I LFN MVNE LLPDSERLYDL LCIA+HSQLHMI TTIDKL+ HTDLVNTATYNLLING
Sbjct: 601 ILLFNHMVNEALLPDSERLYDLFLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLING 660

Query: 661 LWKEDRKYEACKLLDSMLEKGWVPDAMTHGLLIGS----------LVNESSVIEDNVSSI 716
           LWKEDRKYEACKLLDSMLEKGWVPDA THGLLIGS          L++E+S IEDNVSSI
Sbjct: 661 LWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDKVLISENSAIEDNVSSI 720

[Close]
BLAST of CmaCh06G005410 vs. NCBI nr
Match: gi|659084558|ref|XP_008442951.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1135.2 bits (2935), Expect = 0.0e+00
Identity = 576/728 (79.12%), Postives = 643/728 (88.32%), Query Frame = 1 

Query: 1   MAARLMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEESTQSLNNKFVLN 60
           MAARLMPSTLMKKFLKGV PNS LSPILSG +VD+ LENNQ+ PRL++STQ  ++K V N
Sbjct: 1   MAARLMPSTLMKKFLKGVVPNSRLSPILSGIHVDTSLENNQNCPRLKQSTQFSSDKSVTN 60

Query: 61  NSV---KGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQD 120
           NSV   KGLD +  LNSEVEIFKCLAIQKGF  TVQTYY TI+K GL+GN++EM+RTC+D
Sbjct: 61  NSVNSVKGLDYDKKLNSEVEIFKCLAIQKGFFETVQTYYETIVKLGLNGNIDEMERTCRD 120

Query: 121 LVKDGCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENR 180
           LV +GC GVEE+IV+LVN  VR GR REAL V PH++ VGL+PS+ETFNVVLAVFVEE+R
Sbjct: 121 LVNEGCSGVEEIIVSLVNTLVRRGRAREALWVFPHISSVGLRPSVETFNVVLAVFVEEDR 180

Query: 181 DIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFE 240
           DI+EVLFVYKEMVKA IVPNVDTLNFL AALFHAEQIKTAMNQFRRM KKGC PNSKTFE
Sbjct: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLFAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFE 240

Query: 241 VLLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKAS 300
           VL+N LIT+NLVDEAVL LGI+YK  CELDLSFYTCA+SLFCR DRIDVGSWLF MMKAS
Sbjct: 241 VLVNALITKNLVDEAVLVLGIMYKSQCELDLSFYTCAISLFCREDRIDVGSWLFTMMKAS 300

Query: 301 NIIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEA 360
           NI+P TLIY+TLIQSLCK+L LD+ALFLLEEM ESGL P++ VYV II+VFFELGKT EA
Sbjct: 301 NIVPGTLIYNTLIQSLCKSLSLDKALFLLEEMVESGLIPEESVYVSIIEVFFELGKTDEA 360

Query: 361 IKFVKDRCFLFTSPHNALLEGCCNVENILIANRVLGRMSKMSIDDCKSWNIVIGWLCNNA 420
           IKFV+DRC  +TSPHNALLEGC N   IL+AN +LG+MSKM+IDDCKSWNIVIGWLCNNA
Sbjct: 361 IKFVEDRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNA 420

Query: 421 RIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYS 480
           RIG AFEFLGKMIVLSFVPN+DTYAALI+GNCKSRRYE ALQLMNEVH++CW+L+A CYS
Sbjct: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEVALQLMNEVHSKCWILNAGCYS 480

Query: 481 ELIESLCQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYA 540
           ELIE LCQA RTLEAAEVFC+MSKN++PLHPSLFDTLIK +CDLGH+DE LVLLQLA YA
Sbjct: 481 ELIEGLCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKEMCDLGHVDETLVLLQLASYA 540

Query: 541 GTSCKTMTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDS 600
           GTSCKT+TYASI++ELSK+NKA  ALLVLSQMLVLG +L+LETY I IHSF ++NRV +S
Sbjct: 541 GTSCKTVTYASILHELSKTNKAVTALLVLSQMLVLGCNLDLETYYILIHSFSSINRVNES 600

Query: 601 ITLFNRMVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLING 660
           I LFN MVNE LLPDSE LY+LLLCIA+HSQLHMI TTIDKL+ HTDLVNTATYNLLING
Sbjct: 601 ILLFNCMVNEALLPDSEGLYNLLLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLING 660

Query: 661 LWKEDRKYEACKLLDSMLEKGWVPDAMTHGLLIGS----------LVNESSVIEDNVSSI 716
           LWKEDRKYEACKLLDSMLEKGWVPDA THGLLIGS          L++E+S IEDNVSSI
Sbjct: 661 LWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDRVLISENSAIEDNVSSI 720

[Close]
BLAST of CmaCh06G005410 vs. NCBI nr
Match: gi|1009179502|ref|XP_015871114.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g46100-like [Ziziphus jujuba])

HSP 1 Score: 707.6 bits (1825), Expect = 2.2e-200
Identity = 360/729 (49.38%), Postives = 509/729 (69.82%), Query Frame = 1 

Query: 1   MAARLMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNP----RLEESTQSLNNK 60
           MA +L   TL K+    V P++ +S I     V++F E+NQ +P    + E++   L N 
Sbjct: 1   MAVKLSSLTLSKRNPIWVSPSAWISSISCARTVENFPESNQDHPPNSSQFEQNVNILRNN 60

Query: 61  FVLNNSVKGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQ 120
              +N ++ LD+ N+L++ V++FK  ++QK FSHT  TYY  ILK GL G+V+EM+  CQ
Sbjct: 61  LAPDNLIRVLDSTNDLSAAVKVFKWASLQKRFSHTADTYYRVILKLGLAGHVQEMEGFCQ 120

Query: 121 DLVKDGCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEEN 180
           ++VKD C+G +E +  LV+ FV+H R  EA+ VL  +N  G  PSIETFN V+  FV+E 
Sbjct: 121 NMVKDKCIGGKEALTALVDTFVKHCRIDEAVLVLVSMNSGGYNPSIETFNSVMGAFVKEK 180

Query: 181 RDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTF 240
           RD++EVLF+YKE+VKA  +P +DTLN+LL ALF  + +++A++QF+RM+KKGC PNS++F
Sbjct: 181 RDLQEVLFIYKEIVKAGNLPTIDTLNYLLEALFETDHVESALDQFKRMNKKGCSPNSRSF 240

Query: 241 EVLLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKA 300
           E+L+ GLI ++ VDEAV  L  +++   + ++SF++C + LFC  ++ +VG  LFRMMK 
Sbjct: 241 EILIKGLIAKSRVDEAVSVLNEMFESRFQAEMSFFSCTIPLFCLENKPEVGIKLFRMMKD 300

Query: 301 SNIIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGE 360
            N +PD L Y+ L++ LC NL LD+ + L+EEM E+GL   D  YV +I +F  LGK  +
Sbjct: 301 CNFVPDLLTYAVLVRCLCDNLWLDDVINLIEEMTEAGLTLPDKAYVDVINMFSRLGKFDQ 360

Query: 361 AIKFVKDRCFLFTSPHNALLEGCCNVENILIANRVLGRMSKMSIDDCKSWNIVIGWLCNN 420
           AI+F++D   L TS HN LLEGCC+   + +A  +L +M++ +IDDC SWNI++  +C  
Sbjct: 361 AIEFLEDNHVLETSAHNVLLEGCCSAGKLCMAKHLLEKMAERNIDDCDSWNILVRCVCEQ 420

Query: 421 ARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCY 480
               KA + +G+M+VLSF+P+  TY+AL+ GNCK  +YE AL+L  ++ A+CWVL++V Y
Sbjct: 421 EGSRKASQLIGRMVVLSFIPDCATYSALVTGNCKLSKYEDALKLFYQIQAKCWVLNSVSY 480

Query: 481 SELIESLCQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACY 540
           S+LIE LC   R +EAAEVFCYMS+  Y L  SLF+ LIKG+C LG +DEA+ L + ACY
Sbjct: 481 SKLIEGLCHVGRIVEAAEVFCYMSRKGYSLGSSLFNLLIKGVCSLGKVDEAIRLCRWACY 540

Query: 541 AGTSCKTMTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKD 600
           +GTSC + TY +I+  L+K+NK +  LLVLSQMLV G  L+LE YCI I +    NR+K 
Sbjct: 541 SGTSCTSSTYTTIMIGLAKANKGKDLLLVLSQMLVEGCGLDLEAYCILILNMSLQNRIKY 600

Query: 601 SITLFNRMVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLIN 660
           S+ LFN MV EGL+P SE+L ++L CIAD SQL MI  +IDKLI + +++N + YNLLIN
Sbjct: 601 SVLLFNMMVEEGLIPKSEKLLEILSCIADQSQLCMISCSIDKLISNCEIMNPSIYNLLIN 660

Query: 661 GLWKEDRKYEACKLLDSMLEKGWVPDAMTHGLLIGSLVN----------ESSVIEDNVSS 716
           GL KE  K+EAC+LLD MLEKGWVPD+ THGLLIGS+V+           +S+++D VS+
Sbjct: 661 GLLKEGNKHEACRLLDLMLEKGWVPDSKTHGLLIGSVVSGEPDSCALAYGNSIMQDTVSN 720

[Close]
BLAST of CmaCh06G005410 vs. NCBI nr
Match: gi|1009179194|ref|XP_015870949.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Ziziphus jujuba])

HSP 1 Score: 707.6 bits (1825), Expect = 2.2e-200
Identity = 360/729 (49.38%), Postives = 509/729 (69.82%), Query Frame = 1 

Query: 1   MAARLMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNP----RLEESTQSLNNK 60
           MA +L   TL K+    V P++ +S I     V++F E+NQ +P    + E++   L N 
Sbjct: 1   MAVKLSSLTLSKRNPIWVSPSAWISSISCARTVENFPESNQDHPPNSSQFEQNVNILRNN 60

Query: 61  FVLNNSVKGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQ 120
              +N ++ LD+ N+L++ V++FK  ++QK FSHT  TYY  ILK GL G+V+EM+  CQ
Sbjct: 61  LAPDNLIRVLDSTNDLSAAVKVFKWASLQKRFSHTADTYYRVILKLGLAGHVQEMEGFCQ 120

Query: 121 DLVKDGCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEEN 180
           ++VKD C+G +E +  LV+ FV+H R  EA+ VL  +N  G  PSIETFN V+  FV+E 
Sbjct: 121 NMVKDKCIGGKEALTALVDTFVKHCRIDEAVLVLVSMNSGGYNPSIETFNSVMGAFVKEK 180

Query: 181 RDIEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTF 240
           RD++EVLF+YKE+VKA  +P +DTLN+LL ALF  + +++A++QF+RM+KKGC PNS++F
Sbjct: 181 RDLQEVLFIYKEIVKAGNLPTIDTLNYLLEALFETDHVESALDQFKRMNKKGCSPNSRSF 240

Query: 241 EVLLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKA 300
           E+L+ GLI ++ VDEAV  L  +++   + ++SF++C + LFC  ++ +VG  LFRMMK 
Sbjct: 241 EILIKGLIAKSRVDEAVSVLNEMFESRFQAEMSFFSCTIPLFCLENKPEVGIKLFRMMKD 300

Query: 301 SNIIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGE 360
            N +PD L Y+ L++ LC NL LD+ + L+EEM E+GL   D  YV +I +F  LGK  +
Sbjct: 301 CNFVPDLLTYAVLVRCLCDNLWLDDVINLIEEMTEAGLTLPDKAYVDVINMFSRLGKFDQ 360

Query: 361 AIKFVKDRCFLFTSPHNALLEGCCNVENILIANRVLGRMSKMSIDDCKSWNIVIGWLCNN 420
           AI+F++D   L TS HN LLEGCC+   + +A  +L +MS+ +IDDC SWNI++  +C  
Sbjct: 361 AIEFLEDNHVLETSAHNVLLEGCCSAGKLCMAKHLLEKMSERNIDDCDSWNILVRCVCEQ 420

Query: 421 ARIGKAFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCY 480
               KA + +G+M+VLSF+P+  TY+AL+ GNCK  +YE A++L  ++ A+CWVL++V Y
Sbjct: 421 EGSRKASQLIGRMVVLSFIPDCATYSALVTGNCKLSKYEDAVKLFYQIQAKCWVLNSVSY 480

Query: 481 SELIESLCQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACY 540
           S+LIE LC   R +EAAEVFCYMS+  Y L  SLF+ LIKG+C LG +DEA+ L + ACY
Sbjct: 481 SKLIEGLCHVGRIVEAAEVFCYMSRKGYSLGSSLFNLLIKGVCSLGKVDEAIRLCRWACY 540

Query: 541 AGTSCKTMTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKD 600
           +GTSC + TY +I+  L+K+NK +  LLVLSQMLV G  L+LE YCI I +    NR+K 
Sbjct: 541 SGTSCTSSTYTTIMIGLAKANKGKDLLLVLSQMLVEGCGLDLEAYCILILNMSLQNRIKY 600

Query: 601 SITLFNRMVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLIN 660
           S+ LFN MV EGL+P SE+L ++L CIAD SQL MI  +IDKLI + +++N + YNLLIN
Sbjct: 601 SVLLFNMMVEEGLIPKSEKLLEILSCIADQSQLCMISCSIDKLISNCEIMNPSIYNLLIN 660

Query: 661 GLWKEDRKYEACKLLDSMLEKGWVPDAMTHGLLIGSLVN----------ESSVIEDNVSS 716
           GL KE  K+EAC+LLD MLEKGWVPD+ THGLLIGS+V+           +S+++D VS+
Sbjct: 661 GLLKEGNKHEACRLLDLMLEKGWVPDSKTHGLLIGSVVSGEPDSCALAYGNSIMQDTVSN 720

[Close]
BLAST of CmaCh06G005410 vs. NCBI nr
Match: gi|1009176889|ref|XP_015869671.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Ziziphus jujuba])

HSP 1 Score: 705.7 bits (1820), Expect = 8.4e-200
Identity = 360/727 (49.52%), Postives = 505/727 (69.46%), Query Frame = 1 

Query: 1   MAARLMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNP--RLEESTQSLNNKFV 60
           MA +L   TL K+    V P++ +S I     V++F E+NQ +P    +     L N   
Sbjct: 1   MAVKLSSLTLSKRNPIWVSPSAWISSISCARTVENFPESNQDHPPNSSQFEVNILRNNLA 60

Query: 61  LNNSVKGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDL 120
            +N ++ LD+ N+L++ V++FK  ++QK FSHT  TYY  ILK GL G V+EM+  CQ++
Sbjct: 61  PDNLIRVLDSTNDLSAAVKVFKWASLQKRFSHTADTYYRVILKLGLAGRVQEMEGFCQNM 120

Query: 121 VKDGCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRD 180
           VKD C+G +E +  LV+ FV+H R  EA+ VL ++N  G  PSIETFN V+  FV+E RD
Sbjct: 121 VKDRCIGGKEALTALVDTFVKHCRIDEAVLVLVNMNSGGYNPSIETFNSVMGAFVKEKRD 180

Query: 181 IEEVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEV 240
           ++EVLF+YKE+VKA  +P +DTLN+LL ALF  + +++A++QF+RM+KKGC PNS++FE+
Sbjct: 181 LQEVLFIYKEIVKAGNLPTIDTLNYLLEALFETDHVESALDQFKRMNKKGCSPNSRSFEI 240

Query: 241 LLNGLITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASN 300
           L+ GLI ++ VDEAV  L  +++  C  ++SF++C + LFC  ++ ++G  LFRMMK  N
Sbjct: 241 LIKGLIAKSRVDEAVSVLNEMFESRCLAEMSFFSCTIPLFCLENKPEIGIKLFRMMKDCN 300

Query: 301 IIPDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEAI 360
            +PD+L Y+ L++ LC NL LD+ + L+EEM E+GL   D  YV +I +F  LGK  +AI
Sbjct: 301 FVPDSLTYAVLVRCLCDNLWLDDVINLIEEMTEAGLTLPDTAYVDVINMFSRLGKFDQAI 360

Query: 361 KFVKDRCFLFTSPHNALLEGCCNVENILIANRVLGRMSKMSIDDCKSWNIVIGWLCNNAR 420
           KF++D   L TS HN LLEGCC+   + +A  +L +M++ +IDDC SWNI++  +C    
Sbjct: 361 KFLEDNHVLETSAHNVLLEGCCSAGKLCMAKHLLEKMAERNIDDCDSWNILVRCVCEQEG 420

Query: 421 IGKAFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYSE 480
             KA + +G+M+VLSF+P+  TY+AL+ GNCK  +YE AL+L  ++ A+CWVL++V YS+
Sbjct: 421 SRKASQLIGRMVVLSFIPDCATYSALVTGNCKLSKYEDALKLFYQIQAKCWVLNSVSYSK 480

Query: 481 LIESLCQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAG 540
           LIE LC   R +EAAEVFCYMS+  Y L  SLF+ LIKG+C LG +DEA+ L + ACY+G
Sbjct: 481 LIEGLCHVGRIVEAAEVFCYMSRKGYSLGSSLFNLLIKGVCSLGKVDEAIRLRRWACYSG 540

Query: 541 TSCKTMTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSI 600
           TSC + TY +I+  LSK NK +  LLV SQMLV G  L+LE YCI I +    NR+K S+
Sbjct: 541 TSCTSSTYTTIMIGLSKENKGKDLLLVHSQMLVEGCGLDLEAYCILILNMSLQNRIKYSV 600

Query: 601 TLFNRMVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLINGL 660
            LFN MV EGL+P SE+L ++L CIAD SQL MI  +IDKLI + +++N + YNLLINGL
Sbjct: 601 LLFNMMVEEGLIPKSEKLLEILSCIADQSQLCMISCSIDKLISNCEIMNPSIYNLLINGL 660

Query: 661 WKEDRKYEACKLLDSMLEKGWVPDAMTHGLLIGSLVN----------ESSVIEDNVSSIL 716
            KE  K+EAC+LLD MLEKGWVPD+ THGLLIGS+V+           +S+++D VS+IL
Sbjct: 661 LKEGNKHEACRLLDLMLEKGWVPDSKTHGLLIGSVVSGEPDSCALAYGNSIMQDTVSNIL 720

The following BLAST results are available for this feature:
BLAST of CmaCh06G005410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP444_ARATH1.4e-5024.21Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
PPR99_ARATH5.3e-4527.65Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... [more]
PP101_ARATH6.9e-4527.65Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana GN... [more]
PPR94_ARATH5.9e-4426.64Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN... [more]
PP102_ARATH1.7e-4327.96Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana GN... [more]
BLAST of CmaCh06G005410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LE83_CUCSA0.0e+0081.04Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782810 PE=4 SV=1[more]
M5WJY3_PRUPE1.1e-19850.14Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002033mg PE=4 SV=1[more]
B9N416_POPTR1.9e-19549.31Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s00500g PE=4 SV=1[more]
B9I6D0_POPTR7.7e-19248.96Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s00430g PE=4 SV=1[more]
A0A061FBA6_THECC4.6e-18948.78Pentatricopeptide repeat superfamily protein, putative isoform 2 (Fragment) OS=T... [more]
BLAST of CmaCh06G005410 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G64320.18.1e-5224.21 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G63130.13.0e-4627.65 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G63330.13.9e-4627.65 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G62910.13.3e-4526.64 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G63400.19.6e-4527.96 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CmaCh06G005410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437884|ref|XP_004136720.1|0.0e+0081.04PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic-... [more]
gi|659084558|ref|XP_008442951.1|0.0e+0079.12PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-... [more]
gi|1009179502|ref|XP_015871114.1|2.2e-20049.38PREDICTED: pentatricopeptide repeat-containing protein At5g46100-like [Ziziphus ... [more]
gi|1009179194|ref|XP_015870949.1|2.2e-20049.38PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Ziziphus ... [more]
gi|1009176889|ref|XP_015869671.1|8.4e-20049.52PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Ziziphus ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G005410.1CmaCh06G005410.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 440..464
score: 0.092coord: 405..431
score: 0.04coord: 474..502
score: 0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 299..329
score: 3.8E-7coord: 573..605
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 196..243
score: 1.1E-10coord: 647..693
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 132..174
score: 8.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 164..198
score: 0.0029coord: 650..683
score: 1.3E-5coord: 580..613
score: 9.3E-7coord: 305..336
score: 5.2E-5coord: 474..504
score: 3.9E-4coord: 405..437
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 507..541
score: 6.895coord: 542..576
score: 7.333coord: 368..398
score: 5.612coord: 472..506
score: 8.681coord: 232..266
score: 6.829coord: 126..160
score: 7.52coord: 647..681
score: 11.323coord: 267..301
score: 9.109coord: 302..336
score: 12.057coord: 577..611
score: 10.764coord: 437..471
score: 8.068coord: 161..196
score: 9.328coord: 197..231
score: 9.712coord: 402..436
score: 9
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 401..522
score: 1.0E-210coord: 38..357
score: 1.0E-210coord: 558..688
score: 1.0E
NoneNo IPR availablePANTHERPTHR24015:SF804SUBFAMILY NOT NAMEDcoord: 558..688
score: 1.0E-210coord: 38..357
score: 1.0E-210coord: 401..522
score: 1.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G005410Cucsa.242080Cucumber (Gy14) v1cgycmaB0681
CmaCh06G005410Cla017602Watermelon (97103) v1cmawmB788
CmaCh06G005410Csa3G782810Cucumber (Chinese Long) v2cmacuB816
CmaCh06G005410MELO3C009562Melon (DHL92) v3.5.1cmameB755
CmaCh06G005410ClCG10G018110Watermelon (Charleston Gray)cmawcgB726
CmaCh06G005410CSPI03G35840Wild cucumber (PI 183967)cmacpiB828
CmaCh06G005410CmoCh06G005430Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G005410Lsi03G017990Bottle gourd (USVL1VR-Ls)cmalsiB754
CmaCh06G005410MELO3C009562.2Melon (DHL92) v3.6.1cmamedB855
CmaCh06G005410CsaV3_3G038190Cucumber (Chinese Long) v3cmacucB0966
CmaCh06G005410Cla97C10G201070Watermelon (97103) v2cmawmbB844
CmaCh06G005410Bhi11G002048Wax gourdcmawgoB0978
CmaCh06G005410CsGy3G033300Cucumber (Gy14) v2cgybcmaB428
CmaCh06G005410Carg16231Silver-seed gourdcarcmaB0957
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G005410Silver-seed gourdcarcmaB0350
CmaCh06G005410Silver-seed gourdcarcmaB1270
CmaCh06G005410Watermelon (97103) v2cmawmbB852
CmaCh06G005410Wax gourdcmawgoB1031
CmaCh06G005410Cucurbita maxima (Rimu)cmacmaB278
CmaCh06G005410Cucurbita maxima (Rimu)cmacmaB491
CmaCh06G005410Cucurbita moschata (Rifu)cmacmoB792
CmaCh06G005410Cucurbita pepo (Zucchini)cmacpeB820
CmaCh06G005410Cucurbita pepo (Zucchini)cmacpeB830
CmaCh06G005410Cucurbita pepo (Zucchini)cmacpeB852
CmaCh06G005410Bottle gourd (USVL1VR-Ls)cmalsiB746