CmoCh06G002040 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G002040
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	PRA1 (Prenylated RAB acceptor) family protein
Location	Cmo_Chr06 : 1109641 .. 1110318 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTCCTCCCCGGCCATACTTCCAATCTCCAATCCTCAATCCGGCACCGTCCCCGCCGCTGCCTCAGGCGGTTCTGTTCAATCTCAAGCCCCTGTTACCACGCCGGCCTTTCGCGCCTTCATCAACCACCTAACGGAATCGCTCCGACACGGCCTCTCCCAGCAGAGATCATGGGCTGAAGTTGCGGATCGGACGGCCTTTTCGAAGCCTGAGTCGTTCTCCGAAGCGACTCTGCGAATCCGCAAGAATTACTCCTATTTTCGCGTCAATTATCTCGCAGTGGTTGCTCTGATCCTCGGATTTTCCCTCGTTTCTCATCCGTTTTCTCTTCTCCTTTTGGTCGGGCTTTTATCCTCGTGGCTATTCCTCTACCTCTTCCGCCCGTCGGATCAGCCGCTGGTTCTATTTGGCCGCACATTCAAGGATAGCGAAACCCTAATTCTCTTGGTTTTGCTCAGCGTGTTCGTCGTGTTCCTCACCAGTGTTGGATCGGTCCTCGTCTCGGCTCTTATGGTCGGTGTGGGTCTGGTCTGTGCCCATGGTGCGTTTAGGGTTCCTGAGGATCTCTTCCTCGACGAACAAGTAACTGAATCCACCGGATTCCTCTCGTTCTTCAGCAGCGCGGCTTCCAGCGCCGCCGCTGCCGCCGTGCCTGTGGCTGCTCGCACGTGA

mRNA sequence

ATGGCTTCCTCCTCCCCGGCCATACTTCCAATCTCCAATCCTCAATCCGGCACCGTCCCCGCCGCTGCCTCAGGCGGTTCTGTTCAATCTCAAGCCCCTGTTACCACGCCGGCCTTTCGCGCCTTCATCAACCACCTAACGGAATCGCTCCGACACGGCCTCTCCCAGCAGAGATCATGGGCTGAAGTTGCGGATCGGACGGCCTTTTCGAAGCCTGAGTCGTTCTCCGAAGCGACTCTGCGAATCCGCAAGAATTACTCCTATTTTCGCGTCAATTATCTCGCAGTGGTTGCTCTGATCCTCGGATTTTCCCTCGTTTCTCATCCGTTTTCTCTTCTCCTTTTGGTCGGGCTTTTATCCTCGTGGCTATTCCTCTACCTCTTCCGCCCGTCGGATCAGCCGCTGGTTCTATTTGGCCGCACATTCAAGGATAGCGAAACCCTAATTCTCTTGGTTTTGCTCAGCGTGTTCGTCGTGTTCCTCACCAGTGTTGGATCGGTCCTCGTCTCGGCTCTTATGGTCGGTGTGGGTCTGGTCTGTGCCCATGGTGCGTTTAGGGTTCCTGAGGATCTCTTCCTCGACGAACAAGTAACTGAATCCACCGGATTCCTCTCGTTCTTCAGCAGCGCGGCTTCCAGCGCCGCCGCTGCCGCCGTGCCTGTGGCTGCTCGCACGTGA

Coding sequence (CDS)

ATGGCTTCCTCCTCCCCGGCCATACTTCCAATCTCCAATCCTCAATCCGGCACCGTCCCCGCCGCTGCCTCAGGCGGTTCTGTTCAATCTCAAGCCCCTGTTACCACGCCGGCCTTTCGCGCCTTCATCAACCACCTAACGGAATCGCTCCGACACGGCCTCTCCCAGCAGAGATCATGGGCTGAAGTTGCGGATCGGACGGCCTTTTCGAAGCCTGAGTCGTTCTCCGAAGCGACTCTGCGAATCCGCAAGAATTACTCCTATTTTCGCGTCAATTATCTCGCAGTGGTTGCTCTGATCCTCGGATTTTCCCTCGTTTCTCATCCGTTTTCTCTTCTCCTTTTGGTCGGGCTTTTATCCTCGTGGCTATTCCTCTACCTCTTCCGCCCGTCGGATCAGCCGCTGGTTCTATTTGGCCGCACATTCAAGGATAGCGAAACCCTAATTCTCTTGGTTTTGCTCAGCGTGTTCGTCGTGTTCCTCACCAGTGTTGGATCGGTCCTCGTCTCGGCTCTTATGGTCGGTGTGGGTCTGGTCTGTGCCCATGGTGCGTTTAGGGTTCCTGAGGATCTCTTCCTCGACGAACAAGTAACTGAATCCACCGGATTCCTCTCGTTCTTCAGCAGCGCGGCTTCCAGCGCCGCCGCTGCCGCCGTGCCTGTGGCTGCTCGCACGTGA

Homology

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BLAST of CmoCh06G002040 vs. Swiss-Prot
Match: PR1B4_ARATH (PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.3e-74
Identity = 151/219 (68.95%), Postives = 183/219 (83.56%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           MASS+P +LPISNPQ  TVP+AA   SV+SQ P+ TPAFR FIN +TE++++GLS++R W
Sbjct: 1   MASSAPPVLPISNPQ--TVPSAAPS-SVESQPPIATPAFRNFINQITETVKNGLSKRRPW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           AE+ADR+A SKPES S+A +RIRKNYSYF+VNYL V   I+GFSLV+HPFSL+ L+ LL+
Sbjct: 61  AELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLA 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SWLFLYLFRP+DQP+VLFGRTF D ETL  L+L S+FV+FLT VGSVLVSA+M+GV L+C
Sbjct: 121 SWLFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALIC 180

Query: 181 AHGAFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAAAV 220
           AHGAFR PEDLFLDEQ   +TGFLSF   AASSAA A +
Sbjct: 181 AHGAFRAPEDLFLDEQEPAATGFLSFLGGAASSAAPAVI 216

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BLAST of CmoCh06G002040 vs. Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-61
Identity = 130/220 (59.09%), Postives = 166/220 (75.45%), Query Frame = 1


Query: 4   SSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSWAEV 63
           ++P  LPIS+          SGG  QSQ PV+TPAFR F++ L+ S+R  LSQ+R W E+
Sbjct: 3   ANPPTLPISDH---------SGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLEL 62

Query: 64  ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLSSWL 123
            DR+A S+PES ++A  RIR+N  YF+VNY+ +V+L+L  SL+SHPFSLL+L+ L  +W+
Sbjct: 63  VDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWI 122

Query: 124 FLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVCAHG 183
           FLYLFRPSDQPLV+ GRTF D ETL +LV+L++ VVFLTSVGS+L SALM+G G+VC HG
Sbjct: 123 FLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHG 182

Query: 184 AFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAAAVPVAA 224
           AFRVPEDLFLD+Q   +TG LSF S AA+SAA AA    A
Sbjct: 183 AFRVPEDLFLDDQEPANTGLLSFLSGAATSAAVAAASTPA 213

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BLAST of CmoCh06G002040 vs. Swiss-Prot
Match: PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-61
Identity = 125/214 (58.41%), Postives = 163/214 (76.17%), Query Frame = 1


Query: 4   SSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSWAEV 63
           ++P  LP++N Q+           VQSQ P+ TPAFR F + L+ S+R GLSQ+R W E+
Sbjct: 2   ATPPTLPVTNQQA-----------VQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTEL 61

Query: 64  ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLSSWL 123
            DR++ ++PES ++A  RIRKN +YF+VNY+A+V+L+L FSL SHP SLL+L+GLL  W+
Sbjct: 62  IDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWM 121

Query: 124 FLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVCAHG 183
           FLYLFRPSDQPLV+FGRTF D ETL+ LVL ++ VVF+TSVGS+L SALM+GV +VC HG
Sbjct: 122 FLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHG 181

Query: 184 AFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAA 218
           AF VP+DLFLDEQ   + G LSF   +A+SAAAA
Sbjct: 182 AFVVPDDLFLDEQEPANAGLLSFLGGSATSAAAA 204

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BLAST of CmoCh06G002040 vs. Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-60
Identity = 128/222 (57.66%), Postives = 172/222 (77.48%), Query Frame = 1


Query: 3   SSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSWAE 62
           SSSPAILP++N Q+ T          QSQ P+ + AFR F++ L+ SLR  LSQ+R W E
Sbjct: 2   SSSPAILPVTNQQAAT----------QSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLE 61

Query: 63  VADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLSSW 122
           + DR++F++P+S +++  RIRKN +YF+VNY A+V+L+L FSL+SHPFSLL+L+ LL SW
Sbjct: 62  LVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSW 121

Query: 123 LFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVCAH 182
           +FLYLFR SDQPLVLFGR+F D ETL+ LVL ++ VVF+TSVGS+L SAL +G+ +VC H
Sbjct: 122 MFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLH 181

Query: 183 GAFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAAAVPVAAR 225
           GAFRVP+DLFLDEQ   + G LSF  ++A+++AAA+V VA R
Sbjct: 182 GAFRVPDDLFLDEQEPANAGLLSFIGNSAATSAAASV-VAGR 212

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BLAST of CmoCh06G002040 vs. Swiss-Prot
Match: PR1B5_ARATH (PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.2e-56
Identity = 126/226 (55.75%), Postives = 165/226 (73.01%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           M S++P +LPIS   + T        +V    P   P  RAF+N +TE++  GLS+ R W
Sbjct: 1   MVSTNPPVLPISTTATDTTNQPPIVTAVVESQP---PVVRAFVNGVTETVCGGLSRSRPW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           +E+ DR+AF+KP+S SEA  R RKN SYFRVNY+ +VALILGFSL++HPFSL+LL+ L +
Sbjct: 61  SELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAA 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SWLFLYLFRPSD+PL+LFGR+F + ETL  L+L ++ V+F TSVGSVL+SALM+G+  +C
Sbjct: 121 SWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATIC 180

Query: 181 AHGAFRVPEDLFLDEQVTESTGFLSFFS-----SAASSAAAAAVPV 222
            HGAFR P+DLFLDEQ   ++GFLSF       S A SA++AA PV
Sbjct: 181 VHGAFRAPDDLFLDEQDHAASGFLSFIGVPAIPSVAPSASSAASPV 223

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BLAST of CmoCh06G002040 vs. TrEMBL
Match: A0A0A0LF69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G730850 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 8.2e-100
Identity = 205/225 (91.11%), Postives = 213/225 (94.67%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           M+SSSPAILPISNPQS  VPA  SGGSVQSQ PVTTPAFRAFINHL+E LRHGLSQ+R W
Sbjct: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           AE+ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAV+ALILGFSLVSHPFSL+LL GLLS
Sbjct: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVIALILGFSLVSHPFSLILLAGLLS 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SWLFLYLFRPSDQPLVLFGRTFKDSETLILLV+LSVFVVFLTSVGSVLVSALMVGV LVC
Sbjct: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVVLSVFVVFLTSVGSVLVSALMVGVALVC 180

Query: 181 AHGAFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAAAVPVAART 226
           AHGAFRVPEDLFLDEQ   STGFLSFFSSAAS+AAAAAVPVAART
Sbjct: 181 AHGAFRVPEDLFLDEQENVSTGFLSFFSSAASTAAAAAVPVAART 225

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BLAST of CmoCh06G002040 vs. TrEMBL
Match: V4S5L7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012679mg PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.4e-77
Identity = 162/226 (71.68%), Postives = 197/226 (87.17%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           M S+SP +LPISN Q  T  ++AS  SVQSQ PV TPAFRA INH+++SLR+G +Q+R W
Sbjct: 1   MTSASPPVLPISNSQPTTTASSAS--SVQSQPPVATPAFRALINHISDSLRYGFAQRRPW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           AE+ADR+AFSKPESFSEATLRIRKNYSYFRVNYL VVA+++ FSL+++PFSLL+LVGLL+
Sbjct: 61  AELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLA 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SW+FLYLFRPSDQPLV+FGRTF + ETL +L++LS+FV FLTSVGS+L+SA+MVG GL+C
Sbjct: 121 SWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLIC 180

Query: 181 AHGAFRVPEDLFLDEQ-VTESTGFLSFFSSAASSAAAAAVP-VAAR 225
           AHGAFRVPEDLFLDEQ  + +TGFLSF   AAS+AAAAA P V+AR
Sbjct: 181 AHGAFRVPEDLFLDEQEPSANTGFLSFIGGAASNAAAAAAPAVSAR 224

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BLAST of CmoCh06G002040 vs. TrEMBL
Match: A0A067F7B6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027328mg PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.7e-77
Identity = 162/226 (71.68%), Postives = 196/226 (86.73%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           M S+SP +LPISN Q  T  ++AS  SVQSQ PV TPAFRA INH+++SLR+G +Q+R W
Sbjct: 1   MTSASPPVLPISNSQPTTTASSAS--SVQSQPPVATPAFRALINHISDSLRYGFAQRRPW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           AE+ADR+AFSKPESFSEATLRIRKNYSYFRVNYL VVA+++ FSL+++PFSLL+LVGLL+
Sbjct: 61  AELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLA 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SW+FLYLFRPSDQPLV+FGRTF + ETL +L++LS+FV FLTSVGS+L+SA+MVG GL+C
Sbjct: 121 SWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLIC 180

Query: 181 AHGAFRVPEDLFLDEQ-VTESTGFLSFFSSAASSAAAAAVP-VAAR 225
           AHGAFRVPEDLFLDEQ  + STGFLSF   AAS+AAA A P V+AR
Sbjct: 181 AHGAFRVPEDLFLDEQEPSASTGFLSFIGGAASNAAATAAPAVSAR 224

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BLAST of CmoCh06G002040 vs. TrEMBL
Match: A0A061EXR9_THECC (Prenylated RAB acceptor 1.B4 OS=Theobroma cacao GN=TCM_021593 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 4.9e-76
Identity = 161/225 (71.56%), Postives = 187/225 (83.11%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           M+SS+P +LPIS  QS            +SQ PV TPAFR FI+HL +SLR+G SQ+RSW
Sbjct: 1   MSSSAPPVLPISTTQSA-----------ESQPPVATPAFRVFISHLNDSLRNGFSQRRSW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           +E+ DR+AFSKPESFSEA LR+RKNYSYFRVNYL+V+ LIL FSL+SHPFSLLLL+GLL 
Sbjct: 61  SELVDRSAFSKPESFSEAALRVRKNYSYFRVNYLSVIGLILAFSLLSHPFSLLLLLGLLC 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SW+FLYLFRP+DQPLVLFGRTF D ETL +L++ SVFVVFLT+VGS+L+SALMVG GLVC
Sbjct: 121 SWIFLYLFRPADQPLVLFGRTFSDRETLGILIIFSVFVVFLTTVGSLLISALMVGFGLVC 180

Query: 181 AHGAFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAAAVP-VAAR 225
           AHGAFRVPEDLFLDEQ   +TGFLSF   AAS+AAAAA P VAAR
Sbjct: 181 AHGAFRVPEDLFLDEQEPAATGFLSFLGGAASNAAAAAAPAVAAR 214

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BLAST of CmoCh06G002040 vs. TrEMBL
Match: B9SL15_RICCO (Prenylated Rab acceptor protein, putative OS=Ricinus communis GN=RCOM_0848340 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.8e-75
Identity = 165/227 (72.69%), Postives = 189/227 (83.26%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           M+S SP ILPISNPQ  T        +  SQ P+ TPAFRAFINH+++S+R+GLSQ+R W
Sbjct: 1   MSSPSPPILPISNPQPTTT-------TTSSQPPIATPAFRAFINHISDSVRNGLSQRRPW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           AE+ADR+AFSKPESFSEA LR+RKNYSYFRVNYL+V+ LIL FSL+SHP SLLLL+GLLS
Sbjct: 61  AELADRSAFSKPESFSEAALRVRKNYSYFRVNYLSVIGLILAFSLLSHPLSLLLLLGLLS 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SWLFLYLFRPSDQPLVLFGRTF D ETL LL++ SV VVFLTSVGSVL+SALMVG+ +V 
Sbjct: 121 SWLFLYLFRPSDQPLVLFGRTFSDRETLGLLIVFSVVVVFLTSVGSVLISALMVGLAIVF 180

Query: 181 AHGAFRVPEDLFLDEQ-VTESTGFLSFFSSAASSAAAAAVP--VAAR 225
           AHGAFRVPEDLFLD+Q    +TGFLSF   AAS+AAAAA P  VAAR
Sbjct: 181 AHGAFRVPEDLFLDDQEPAAATGFLSFLGGAASNAAAAAAPAVVAAR 220

[Close]

BLAST of CmoCh06G002040 vs. TAIR10
Match: AT2G38360.1 (AT2G38360.1 prenylated RAB acceptor 1.B4)

HSP 1 Score: 280.8 bits (717), Expect = 7.4e-76
Identity = 151/219 (68.95%), Postives = 183/219 (83.56%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           MASS+P +LPISNPQ  TVP+AA   SV+SQ P+ TPAFR FIN +TE++++GLS++R W
Sbjct: 1   MASSAPPVLPISNPQ--TVPSAAPS-SVESQPPIATPAFRNFINQITETVKNGLSKRRPW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           AE+ADR+A SKPES S+A +RIRKNYSYF+VNYL V   I+GFSLV+HPFSL+ L+ LL+
Sbjct: 61  AELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLA 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SWLFLYLFRP+DQP+VLFGRTF D ETL  L+L S+FV+FLT VGSVLVSA+M+GV L+C
Sbjct: 121 SWLFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALIC 180

Query: 181 AHGAFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAAAV 220
           AHGAFR PEDLFLDEQ   +TGFLSF   AASSAA A +
Sbjct: 181 AHGAFRAPEDLFLDEQEPAATGFLSFLGGAASSAAPAVI 216

[Close]

BLAST of CmoCh06G002040 vs. TAIR10
Match: AT5G05380.1 (AT5G05380.1 prenylated RAB acceptor 1.B3)

HSP 1 Score: 236.9 bits (603), Expect = 1.2e-62
Identity = 130/220 (59.09%), Postives = 166/220 (75.45%), Query Frame = 1


Query: 4   SSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSWAEV 63
           ++P  LPIS+          SGG  QSQ PV+TPAFR F++ L+ S+R  LSQ+R W E+
Sbjct: 3   ANPPTLPISDH---------SGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLEL 62

Query: 64  ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLSSWL 123
            DR+A S+PES ++A  RIR+N  YF+VNY+ +V+L+L  SL+SHPFSLL+L+ L  +W+
Sbjct: 63  VDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWI 122

Query: 124 FLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVCAHG 183
           FLYLFRPSDQPLV+ GRTF D ETL +LV+L++ VVFLTSVGS+L SALM+G G+VC HG
Sbjct: 123 FLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHG 182

Query: 184 AFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAAAVPVAA 224
           AFRVPEDLFLD+Q   +TG LSF S AA+SAA AA    A
Sbjct: 183 AFRVPEDLFLDDQEPANTGLLSFLSGAATSAAVAAASTPA 213

[Close]

BLAST of CmoCh06G002040 vs. TAIR10
Match: AT3G56110.1 (AT3G56110.1 prenylated RAB acceptor 1.B1)

HSP 1 Score: 236.9 bits (603), Expect = 1.2e-62
Identity = 125/214 (58.41%), Postives = 163/214 (76.17%), Query Frame = 1


Query: 4   SSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSWAEV 63
           ++P  LP++N Q+           VQSQ P+ TPAFR F + L+ S+R GLSQ+R W E+
Sbjct: 2   ATPPTLPVTNQQA-----------VQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTEL 61

Query: 64  ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLSSWL 123
            DR++ ++PES ++A  RIRKN +YF+VNY+A+V+L+L FSL SHP SLL+L+GLL  W+
Sbjct: 62  IDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWM 121

Query: 124 FLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVCAHG 183
           FLYLFRPSDQPLV+FGRTF D ETL+ LVL ++ VVF+TSVGS+L SALM+GV +VC HG
Sbjct: 122 FLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHG 181

Query: 184 AFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAA 218
           AF VP+DLFLDEQ   + G LSF   +A+SAAAA
Sbjct: 182 AFVVPDDLFLDEQEPANAGLLSFLGGSATSAAAA 204

[Close]

BLAST of CmoCh06G002040 vs. TAIR10
Match: AT2G40380.1 (AT2G40380.1 prenylated RAB acceptor 1.B2)

HSP 1 Score: 234.2 bits (596), Expect = 8.0e-62
Identity = 128/222 (57.66%), Postives = 172/222 (77.48%), Query Frame = 1


Query: 3   SSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSWAE 62
           SSSPAILP++N Q+ T          QSQ P+ + AFR F++ L+ SLR  LSQ+R W E
Sbjct: 2   SSSPAILPVTNQQAAT----------QSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLE 61

Query: 63  VADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLSSW 122
           + DR++F++P+S +++  RIRKN +YF+VNY A+V+L+L FSL+SHPFSLL+L+ LL SW
Sbjct: 62  LVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSW 121

Query: 123 LFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVCAH 182
           +FLYLFR SDQPLVLFGR+F D ETL+ LVL ++ VVF+TSVGS+L SAL +G+ +VC H
Sbjct: 122 MFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLH 181

Query: 183 GAFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAAAVPVAAR 225
           GAFRVP+DLFLDEQ   + G LSF  ++A+++AAA+V VA R
Sbjct: 182 GAFRVPDDLFLDEQEPANAGLLSFIGNSAATSAAASV-VAGR 212

[Close]

BLAST of CmoCh06G002040 vs. TAIR10
Match: AT5G01640.1 (AT5G01640.1 prenylated RAB acceptor 1.B5)

HSP 1 Score: 221.1 bits (562), Expect = 7.0e-58
Identity = 126/226 (55.75%), Postives = 165/226 (73.01%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           M S++P +LPIS   + T        +V    P   P  RAF+N +TE++  GLS+ R W
Sbjct: 1   MVSTNPPVLPISTTATDTTNQPPIVTAVVESQP---PVVRAFVNGVTETVCGGLSRSRPW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           +E+ DR+AF+KP+S SEA  R RKN SYFRVNY+ +VALILGFSL++HPFSL+LL+ L +
Sbjct: 61  SELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAA 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SWLFLYLFRPSD+PL+LFGR+F + ETL  L+L ++ V+F TSVGSVL+SALM+G+  +C
Sbjct: 121 SWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATIC 180

Query: 181 AHGAFRVPEDLFLDEQVTESTGFLSFFS-----SAASSAAAAAVPV 222
            HGAFR P+DLFLDEQ   ++GFLSF       S A SA++AA PV
Sbjct: 181 VHGAFRAPDDLFLDEQDHAASGFLSFIGVPAIPSVAPSASSAASPV 223

[Close]

BLAST of CmoCh06G002040 vs. NCBI nr
Match: gi|449439843|ref|XP_004137695.1| (PREDICTED: PRA1 family protein B4 [Cucumis sativus])

HSP 1 Score: 371.3 bits (952), Expect = 1.2e-99
Identity = 205/225 (91.11%), Postives = 213/225 (94.67%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           M+SSSPAILPISNPQS  VPA  SGGSVQSQ PVTTPAFRAFINHL+E LRHGLSQ+R W
Sbjct: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           AE+ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAV+ALILGFSLVSHPFSL+LL GLLS
Sbjct: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVIALILGFSLVSHPFSLILLAGLLS 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SWLFLYLFRPSDQPLVLFGRTFKDSETLILLV+LSVFVVFLTSVGSVLVSALMVGV LVC
Sbjct: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVVLSVFVVFLTSVGSVLVSALMVGVALVC 180

Query: 181 AHGAFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAAAVPVAART 226
           AHGAFRVPEDLFLDEQ   STGFLSFFSSAAS+AAAAAVPVAART
Sbjct: 181 AHGAFRVPEDLFLDEQENVSTGFLSFFSSAASTAAAAAVPVAART 225

[Close]

BLAST of CmoCh06G002040 vs. NCBI nr
Match: gi|659083458|ref|XP_008442368.1| (PREDICTED: PRA1 family protein B4 [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 1.0e-98
Identity = 203/225 (90.22%), Postives = 211/225 (93.78%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           M+SSSPAILPISNPQS  VPA  SGGSVQSQ PVTTPAFRAFINHL+E LRHGLSQ+R W
Sbjct: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           AE+ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSL+LL GLLS
Sbjct: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SWLFLYLFRPSDQPLVLFGRTFKDSETLILLV+ SVFV+FLTSVGSVLVSALMVGV LVC
Sbjct: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVVFSVFVIFLTSVGSVLVSALMVGVALVC 180

Query: 181 AHGAFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAAAVPVAART 226
           AHGAFRVPEDLFLDEQ   STGFLSFFSSAAS+AAAAA PVAART
Sbjct: 181 AHGAFRVPEDLFLDEQENVSTGFLSFFSSAASTAAAAAAPVAART 225

[Close]

BLAST of CmoCh06G002040 vs. NCBI nr
Match: gi|567873807|ref|XP_006429493.1| (hypothetical protein CICLE_v10012679mg [Citrus clementina])

HSP 1 Score: 295.8 bits (756), Expect = 6.3e-77
Identity = 162/226 (71.68%), Postives = 197/226 (87.17%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           M S+SP +LPISN Q  T  ++AS  SVQSQ PV TPAFRA INH+++SLR+G +Q+R W
Sbjct: 1   MTSASPPVLPISNSQPTTTASSAS--SVQSQPPVATPAFRALINHISDSLRYGFAQRRPW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           AE+ADR+AFSKPESFSEATLRIRKNYSYFRVNYL VVA+++ FSL+++PFSLL+LVGLL+
Sbjct: 61  AELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLA 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SW+FLYLFRPSDQPLV+FGRTF + ETL +L++LS+FV FLTSVGS+L+SA+MVG GL+C
Sbjct: 121 SWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLIC 180

Query: 181 AHGAFRVPEDLFLDEQ-VTESTGFLSFFSSAASSAAAAAVP-VAAR 225
           AHGAFRVPEDLFLDEQ  + +TGFLSF   AAS+AAAAA P V+AR
Sbjct: 181 AHGAFRVPEDLFLDEQEPSANTGFLSFIGGAASNAAAAAAPAVSAR 224

[Close]

BLAST of CmoCh06G002040 vs. NCBI nr
Match: gi|641844375|gb|KDO63269.1| (hypothetical protein CISIN_1g027328mg [Citrus sinensis])

HSP 1 Score: 295.4 bits (755), Expect = 8.2e-77
Identity = 162/226 (71.68%), Postives = 196/226 (86.73%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           M S+SP +LPISN Q  T  ++AS  SVQSQ PV TPAFRA INH+++SLR+G +Q+R W
Sbjct: 1   MTSASPPVLPISNSQPTTTASSAS--SVQSQPPVATPAFRALINHISDSLRYGFAQRRPW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           AE+ADR+AFSKPESFSEATLRIRKNYSYFRVNYL VVA+++ FSL+++PFSLL+LVGLL+
Sbjct: 61  AELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLA 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SW+FLYLFRPSDQPLV+FGRTF + ETL +L++LS+FV FLTSVGS+L+SA+MVG GL+C
Sbjct: 121 SWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLIC 180

Query: 181 AHGAFRVPEDLFLDEQ-VTESTGFLSFFSSAASSAAAAAVP-VAAR 225
           AHGAFRVPEDLFLDEQ  + STGFLSF   AAS+AAA A P V+AR
Sbjct: 181 AHGAFRVPEDLFLDEQEPSASTGFLSFIGGAASNAAATAAPAVSAR 224

[Close]

BLAST of CmoCh06G002040 vs. NCBI nr
Match: gi|590627859|ref|XP_007026562.1| (Prenylated RAB acceptor 1.B4 [Theobroma cacao])

HSP 1 Score: 292.4 bits (747), Expect = 7.0e-76
Identity = 161/225 (71.56%), Postives = 187/225 (83.11%), Query Frame = 1


Query: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60
           M+SS+P +LPIS  QS            +SQ PV TPAFR FI+HL +SLR+G SQ+RSW
Sbjct: 1   MSSSAPPVLPISTTQSA-----------ESQPPVATPAFRVFISHLNDSLRNGFSQRRSW 60

Query: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120
           +E+ DR+AFSKPESFSEA LR+RKNYSYFRVNYL+V+ LIL FSL+SHPFSLLLL+GLL 
Sbjct: 61  SELVDRSAFSKPESFSEAALRVRKNYSYFRVNYLSVIGLILAFSLLSHPFSLLLLLGLLC 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALMVGVGLVC 180
           SW+FLYLFRP+DQPLVLFGRTF D ETL +L++ SVFVVFLT+VGS+L+SALMVG GLVC
Sbjct: 121 SWIFLYLFRPADQPLVLFGRTFSDRETLGILIIFSVFVVFLTTVGSLLISALMVGFGLVC 180

Query: 181 AHGAFRVPEDLFLDEQVTESTGFLSFFSSAASSAAAAAVP-VAAR 225
           AHGAFRVPEDLFLDEQ   +TGFLSF   AAS+AAAAA P VAAR
Sbjct: 181 AHGAFRVPEDLFLDEQEPAATGFLSFLGGAASNAAAAAAPAVAAR 214

The following BLAST results are available for this feature:

BLAST of CmoCh06G002040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR1B4_ARATH	1.3e-74	68.95	PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1	[more]
PR1B3_ARATH	2.2e-61	59.09	PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1	[more]
PR1B1_ARATH	2.2e-61	58.41	PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1	[more]
PR1B2_ARATH	1.4e-60	57.66	PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1	[more]
PR1B5_ARATH	1.2e-56	55.75	PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1	[more]

BLAST of CmoCh06G002040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF69_CUCSA	8.2e-100	91.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G730850 PE=4 SV=1	[more]
V4S5L7_9ROSI	4.4e-77	71.68	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012679mg PE=4 SV=1	[more]
A0A067F7B6_CITSI	5.7e-77	71.68	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027328mg PE=4 SV=1	[more]
A0A061EXR9_THECC	4.9e-76	71.56	Prenylated RAB acceptor 1.B4 OS=Theobroma cacao GN=TCM_021593 PE=4 SV=1	[more]
B9SL15_RICCO	1.8e-75	72.69	Prenylated Rab acceptor protein, putative OS=Ricinus communis GN=RCOM_0848340 PE...	[more]

BLAST of CmoCh06G002040 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38360.1	7.4e-76	68.95	prenylated RAB acceptor 1.B4	[more]
AT5G05380.1	1.2e-62	59.09	prenylated RAB acceptor 1.B3	[more]
AT3G56110.1	1.2e-62	58.41	prenylated RAB acceptor 1.B1	[more]
AT2G40380.1	8.0e-62	57.66	prenylated RAB acceptor 1.B2	[more]
AT5G01640.1	7.0e-58	55.75	prenylated RAB acceptor 1.B5	[more]

BLAST of CmoCh06G002040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439843\|ref\|XP_004137695.1\|	1.2e-99	91.11	PREDICTED: PRA1 family protein B4 [Cucumis sativus]	[more]
gi\|659083458\|ref\|XP_008442368.1\|	1.0e-98	90.22	PREDICTED: PRA1 family protein B4 [Cucumis melo]	[more]
gi\|567873807\|ref\|XP_006429493.1\|	6.3e-77	71.68	hypothetical protein CICLE_v10012679mg [Citrus clementina]	[more]
gi\|641844375\|gb\|KDO63269.1\|	8.2e-77	71.68	hypothetical protein CISIN_1g027328mg [Citrus sinensis]	[more]
gi\|590627859\|ref\|XP_007026562.1\|	7.0e-76	71.56	Prenylated RAB acceptor 1.B4 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004895	Prenylated_rab_accept_PRA1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005768	endosome
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G002040.1	CmoCh06G002040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 54..196 score: 1.2
None	No IPR available	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..212 score: 4.6E
None	No IPR available	PANTHER	PTHR19317:SF9	PRA1 FAMILY PROTEIN B1-RELATED	coord: 1..212 score: 4.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G002040	Cucsa.130230	Cucumber (Gy14) v1	cgycmoB0351
CmoCh06G002040	Cucsa.176730	Cucumber (Gy14) v1	cgycmoB0507
CmoCh06G002040	CmaCh14G000400	Cucurbita maxima (Rimu)	cmacmoB268
CmoCh06G002040	CmaCh03G003210	Cucurbita maxima (Rimu)	cmacmoB664
CmoCh06G002040	CmaCh04G010890	Cucurbita maxima (Rimu)	cmacmoB749
CmoCh06G002040	CmaCh04G001240	Cucurbita maxima (Rimu)	cmacmoB751
CmoCh06G002040	CmaCh06G002120	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G002040	Cla012002	Watermelon (97103) v1	cmowmB797
CmoCh06G002040	Cla018020	Watermelon (97103) v1	cmowmB782
CmoCh06G002040	Csa3G730850	Cucumber (Chinese Long) v2	cmocuB807
CmoCh06G002040	Csa4G314420	Cucumber (Chinese Long) v2	cmocuB824
CmoCh06G002040	MELO3C009132	Melon (DHL92) v3.5.1	cmomeB747
CmoCh06G002040	MELO3C026026	Melon (DHL92) v3.5.1	cmomeB762
CmoCh06G002040	ClCG10G022440	Watermelon (Charleston Gray)	cmowcgB729
CmoCh06G002040	ClCG04G006680	Watermelon (Charleston Gray)	cmowcgB742
CmoCh06G002040	CSPI03G30940	Wild cucumber (PI 183967)	cmocpiB815
CmoCh06G002040	Lsi03G022490	Bottle gourd (USVL1VR-Ls)	cmolsiB747
CmoCh06G002040	Lsi01G015840	Bottle gourd (USVL1VR-Ls)	cmolsiB741
CmoCh06G002040	Cp4.1LG10g07730	Cucurbita pepo (Zucchini)	cmocpeB763
CmoCh06G002040	Cp4.1LG01g11740	Cucurbita pepo (Zucchini)	cmocpeB779
CmoCh06G002040	Cp4.1LG03g03470	Cucurbita pepo (Zucchini)	cmocpeB783
CmoCh06G002040	Cp4.1LG08g12240	Cucurbita pepo (Zucchini)	cmocpeB797
CmoCh06G002040	MELO3C009132.2	Melon (DHL92) v3.6.1	cmomedB849
CmoCh06G002040	MELO3C026026.2	Melon (DHL92) v3.6.1	cmomedB866
CmoCh06G002040	CsaV3_3G033410	Cucumber (Chinese Long) v3	cmocucB0954
CmoCh06G002040	Cla97C04G073280	Watermelon (97103) v2	cmowmbB831
CmoCh06G002040	Cla97C10G205770	Watermelon (97103) v2	cmowmbB818
CmoCh06G002040	Bhi11G001482	Wax gourd	cmowgoB0972
CmoCh06G002040	CsGy4G015520	Cucumber (Gy14) v2	cgybcmoB536
CmoCh06G002040	CsGy3G028740	Cucumber (Gy14) v2	cgybcmoB402
CmoCh06G002040	Carg00191	Silver-seed gourd	carcmoB0927
CmoCh06G002040	Carg12455	Silver-seed gourd	carcmoB1343
CmoCh06G002040	Carg20020	Silver-seed gourd	carcmoB0756
CmoCh06G002040	Carg01124	Silver-seed gourd	carcmoB0227

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh06G002040	CmoCh14G000360	Cucurbita moschata (Rifu)	cmocmoB222
CmoCh06G002040	CmoCh03G003330	Cucurbita moschata (Rifu)	cmocmoB453
CmoCh06G002040	CmoCh04G011540	Cucurbita moschata (Rifu)	cmocmoB473

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G002040	Cucumber (Chinese Long) v3	cmocucB0972
CmoCh06G002040	Wax gourd	cmowgoB1030