Carg12455 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12455
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	PRA1 family protein
Location	Cucurbita_argyrosperma_scaffold_056 : 141921 .. 142595 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCTCTCCGGCCATACTTCCCATCTCCAATCCTCAATCCCCCGCCATCCTCTCCGCTGCATCCGGCGGTTCTCTCCAATCTCAAGGCCCTGTCACCACGCCGGCCTTCCGCGTCTTCATTAACCACATATCGGAATCTCTCCGGCACGGCCTCTCCCAGCGAAAACCATGGGCCGAACTTGCGGATCGGACGGCATTTTCAAAGCCCGAATCATTATCCGAAGCGACCTTGCGAATTCGCAAGAATTACTCCTATTTTCGCGTCAATTATCTCGCTGTGGTTGCTCTGATCCTTGGCTTTTCTCTCGTTTCTCATCCGTTTTCCCTTATTCTTCTGGTCGGGCTTTTATCCTCGTGGATATTCCTCTACCTCTTCCGTCCGTCGGATCAGCCGCTGGTTGTATTCGGCCGCACATTCAAGGACAGTGAAACCCTAATTCTCCTGGTTTTGCTCAGCGTGTTCGTCGTGTTCCTCACTAGCGTTGGATCGGTCCTCGTTTCGGCTCTTTTGGTCGGTGTGGCTCTGGTTTGTGCCCACGGCGCGTTTAGAGTTCCCGAAGATCTCTTCCTGGACGAACAAGACAATGTATCCCCCGGATTTCTCTCGTTCTTTAGCAGCGCGGCTTCCAGCGCTGCCGCTGCCGCCGTGCCTGTGGCTGCTCGCACGTGA

mRNA sequence

ATGTCTTCCTCTCCGGCCATACTTCCCATCTCCAATCCTCAATCCCCCGCCATCCTCTCCGCTGCATCCGGCGGTTCTCTCCAATCTCAAGGCCCTGTCACCACGCCGGCCTTCCGCGTCTTCATTAACCACATATCGGAATCTCTCCGGCACGGCCTCTCCCAGCGAAAACCATGGGCCGAACTTGCGGATCGGACGGCATTTTCAAAGCCCGAATCATTATCCGAAGCGACCTTGCGAATTCGCAAGAATTACTCCTATTTTCGCGTCAATTATCTCGCTGTGGTTGCTCTGATCCTTGGCTTTTCTCTCGTTTCTCATCCGTTTTCCCTTATTCTTCTGGTCGGGCTTTTATCCTCGTGGATATTCCTCTACCTCTTCCGTCCGTCGGATCAGCCGCTGGTTGTATTCGGCCGCACATTCAAGGACAGTGAAACCCTAATTCTCCTGGTTTTGCTCAGCGTGTTCGTCGTGTTCCTCACTAGCGTTGGATCGGTCCTCGTTTCGGCTCTTTTGGTCGGTGTGGCTCTGGTTTGTGCCCACGGCGCGTTTAGAGTTCCCGAAGATCTCTTCCTGGACGAACAAGACAATGTATCCCCCGGATTTCTCTCGTTCTTTAGCAGCGCGGCTTCCAGCGCTGCCGCTGCCGCCGTGCCTGTGGCTGCTCGCACGTGA

Coding sequence (CDS)

ATGTCTTCCTCTCCGGCCATACTTCCCATCTCCAATCCTCAATCCCCCGCCATCCTCTCCGCTGCATCCGGCGGTTCTCTCCAATCTCAAGGCCCTGTCACCACGCCGGCCTTCCGCGTCTTCATTAACCACATATCGGAATCTCTCCGGCACGGCCTCTCCCAGCGAAAACCATGGGCCGAACTTGCGGATCGGACGGCATTTTCAAAGCCCGAATCATTATCCGAAGCGACCTTGCGAATTCGCAAGAATTACTCCTATTTTCGCGTCAATTATCTCGCTGTGGTTGCTCTGATCCTTGGCTTTTCTCTCGTTTCTCATCCGTTTTCCCTTATTCTTCTGGTCGGGCTTTTATCCTCGTGGATATTCCTCTACCTCTTCCGTCCGTCGGATCAGCCGCTGGTTGTATTCGGCCGCACATTCAAGGACAGTGAAACCCTAATTCTCCTGGTTTTGCTCAGCGTGTTCGTCGTGTTCCTCACTAGCGTTGGATCGGTCCTCGTTTCGGCTCTTTTGGTCGGTGTGGCTCTGGTTTGTGCCCACGGCGCGTTTAGAGTTCCCGAAGATCTCTTCCTGGACGAACAAGACAATGTATCCCCCGGATTTCTCTCGTTCTTTAGCAGCGCGGCTTCCAGCGCTGCCGCTGCCGCCGTGCCTGTGGCTGCTCGCACGTGA

Protein sequence

MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSWIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAHGAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAART

Homology

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BLAST of Carg12455 vs. NCBI nr
Match: XP_023527930.1 (PRA1 family protein B4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.9 bits (995), Expect = 2.4e-104
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA
Sbjct: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60

Query: 61  ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS
Sbjct: 61  ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA
Sbjct: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSFXXXXXXXXXXXXXPVAART 225
           HGAFRVPEDLFLDEQDNVSPGFLSFXXXXXXXXXXXXXPVAART
Sbjct: 181 HGAFRVPEDLFLDEQDNVSPGFLSFXXXXXXXXXXXXXPVAART 224

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BLAST of Carg12455 vs. NCBI nr
Match: XP_022934319.1 (PRA1 family protein B4-like [Cucurbita moschata])

HSP 1 Score: 385.6 bits (989), Expect = 1.2e-103
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA
Sbjct: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60

Query: 61  ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           ELADRTAFSKPESLSEAT RIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS
Sbjct: 61  ELADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA
Sbjct: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSFXXXXXXXXXXXXXPVAART 225
           HGAFRVPEDLFLDEQDNVSPGFLSFXXXXXXXXXXXXXPVAART
Sbjct: 181 HGAFRVPEDLFLDEQDNVSPGFLSFXXXXXXXXXXXXXPVAART 224

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BLAST of Carg12455 vs. NCBI nr
Match: XP_022983331.1 (PRA1 family protein B4-like [Cucurbita maxima])

HSP 1 Score: 374.0 bits (959), Expect = 3.5e-100
Identity = 200/205 (97.56%), Postives = 203/205 (99.02%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           MSSSPAILPISNPQS A+LSA SGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA
Sbjct: 1   MSSSPAILPISNPQSTAVLSATSGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60

Query: 61  ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILL+GLLSS
Sbjct: 61  ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLLGLLSS 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA
Sbjct: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSF 206
           HGAFRVPEDLFLDEQDNV+PGFLSF
Sbjct: 181 HGAFRVPEDLFLDEQDNVTPGFLSF 205

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BLAST of Carg12455 vs. NCBI nr
Match: XP_022159363.1 (PRA1 family protein B4-like [Momordica charantia])

HSP 1 Score: 360.1 bits (923), Expect = 5.3e-96
Identity = 192/224 (85.71%), Postives = 204/224 (91.07%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           MSSSPAILPISNPQS A ++AASGGS+QSQGPVTTPAFRVFINH+SESLRHGLSQR+PWA
Sbjct: 1   MSSSPAILPISNPQSTATVAAASGGSVQSQGPVTTPAFRVFINHLSESLRHGLSQRRPWA 60

Query: 61  ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           E+ADRTAFSKPESLSEATLRIRKNY+YFRVNYLAV+ALILGFSLVSHPFSLILL GLLSS
Sbjct: 61  EVADRTAFSKPESLSEATLRIRKNYTYFRVNYLAVIALILGFSLVSHPFSLILLAGLLSS 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           W+FLYLFRPSDQPLV+FGRTFKDSETLILLV LSVFVVFLTSVGSVLVSAL+VGVALVCA
Sbjct: 121 WLFLYLFRPSDQPLVLFGRTFKDSETLILLVCLSVFVVFLTSVGSVLVSALMVGVALVCA 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSFXXXXXXXXXXXXXPVAART 225
           HGAFRVPEDLFLDEQ+ VS GFLSF             PV ART
Sbjct: 181 HGAFRVPEDLFLDEQETVSTGFLSFFSSAASNAAAVGVPVTART 224

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BLAST of Carg12455 vs. NCBI nr
Match: XP_004137695.1 (PREDICTED: PRA1 family protein B4 [Cucumis sativus] >KGN58721.1 hypothetical protein Csa_3G730850 [Cucumis sativus])

HSP 1 Score: 354.8 bits (909), Expect = 2.2e-94
Identity = 199/223 (89.24%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 2   SSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAE 61
           SSSPAILPISNPQS  + +  SGGS+QSQGPVTTPAFR FINH+SE LRHGLSQR+PWAE
Sbjct: 3   SSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAE 62

Query: 62  LADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSW 121
           LADRTAFSKPES SEATLRIRKNYSYFRVNYLAV+ALILGFSLVSHPFSLILL GLLSSW
Sbjct: 63  LADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVIALILGFSLVSHPFSLILLAGLLSSW 122

Query: 122 IFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAH 181
           +FLYLFRPSDQPLV+FGRTFKDSETLILLV+LSVFVVFLTSVGSVLVSAL+VGVALVCAH
Sbjct: 123 LFLYLFRPSDQPLVLFGRTFKDSETLILLVVLSVFVVFLTSVGSVLVSALMVGVALVCAH 182

Query: 182 GAFRVPEDLFLDEQDNVSPGFLSFXXXXXXXXXXXXXPVAART 225
           GAFRVPEDLFLDEQ+NVS GFLSF  XXXXXXXXXX PVAART
Sbjct: 183 GAFRVPEDLFLDEQENVSTGFLSFFSXXXXXXXXXXVPVAART 225

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BLAST of Carg12455 vs. TAIR10
Match: AT2G38360.1 (prenylated RAB acceptor 1.B4)

HSP 1 Score: 265.0 bits (676), Expect = 4.2e-71
Identity = 134/204 (65.69%), Postives = 169/204 (82.84%), Query Frame = 0


Query: 2   SSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAE 61
           SS+P +LPISNPQ+   +         SQ P+ TPAFR FIN I+E++++GLS+R+PWAE
Sbjct: 3   SSAPPVLPISNPQT---VXXXXXXXXXSQPPIATPAFRNFINQITETVKNGLSKRRPWAE 62

Query: 62  LADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSW 121
           LADR+A SKPES+S+A +RIRKNYSYF+VNYL V   I+GFSLV+HPFSL+ L+ LL+SW
Sbjct: 63  LADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASW 122

Query: 122 IFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAH 181
           +FLYLFRP+DQP+V+FGRTF D ETL  L+L S+FV+FLT VGSVLVSA+++GVAL+CAH
Sbjct: 123 LFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAH 182

Query: 182 GAFRVPEDLFLDEQDNVSPGFLSF 206
           GAFR PEDLFLDEQ+  + GFLSF
Sbjct: 183 GAFRAPEDLFLDEQEPAATGFLSF 203

[Close]

BLAST of Carg12455 vs. TAIR10
Match: AT3G56110.1 (prenylated RAB acceptor 1.B1)

HSP 1 Score: 240.7 bits (613), Expect = 8.5e-64
Identity = 121/203 (59.61%), Postives = 159/203 (78.33%), Query Frame = 0


Query: 3   SSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAEL 62
           ++P  LP++N Q           ++QSQ P+ TPAFR F + +S S+R GLSQR+PW EL
Sbjct: 2   ATPPTLPVTNQQ-----------AVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTEL 61

Query: 63  ADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSWI 122
            DR++ ++PESL++A  RIRKN +YF+VNY+A+V+L+L FSL SHP SL++L+GLL  W+
Sbjct: 62  IDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWM 121

Query: 123 FLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAHG 182
           FLYLFRPSDQPLVVFGRTF D ETL+ LVL ++ VVF+TSVGS+L SAL++GVA+VC HG
Sbjct: 122 FLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHG 181

Query: 183 AFRVPEDLFLDEQDNVSPGFLSF 206
           AF VP+DLFLDEQ+  + G LSF
Sbjct: 182 AFVVPDDLFLDEQEPANAGLLSF 193

[Close]

BLAST of Carg12455 vs. TAIR10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2)

HSP 1 Score: 239.2 bits (609), Expect = 2.5e-63
Identity = 122/205 (59.51%), Postives = 163/205 (79.51%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           MSSSPAILP++N Q+          + QSQ P+ + AFR F++ +S SLR  LSQR+PW 
Sbjct: 1   MSSSPAILPVTNQQA----------ATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWL 60

Query: 61  ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           EL DR++F++P+SL+++  RIRKN +YF+VNY A+V+L+L FSL+SHPFSL++L+ LL S
Sbjct: 61  ELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGS 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           W+FLYLFR SDQPLV+FGR+F D ETL+ LVL ++ VVF+TSVGS+L SAL +G+A+VC 
Sbjct: 121 WMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCL 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSF 206
           HGAFRVP+DLFLDEQ+  + G LSF
Sbjct: 181 HGAFRVPDDLFLDEQEPANAGLLSF 195

[Close]

BLAST of Carg12455 vs. TAIR10
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3)

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-62
Identity = 123/205 (60.00%), Postives = 158/205 (77.07%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           M ++P  LPIS+          SGG  QSQ PV+TPAFR F++ +S S+R  LSQR+PW 
Sbjct: 1   MMANPPTLPISD---------HSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWL 60

Query: 61  ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           EL DR+A S+PESL++A  RIR+N  YF+VNY+ +V+L+L  SL+SHPFSL++L+ L  +
Sbjct: 61  ELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCA 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           WIFLYLFRPSDQPLVV GRTF D ETL +LV+L++ VVFLTSVGS+L SAL++G  +VC 
Sbjct: 121 WIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCL 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSF 206
           HGAFRVPEDLFLD+Q+  + G LSF
Sbjct: 181 HGAFRVPEDLFLDDQEPANTGLLSF 196

[Close]

BLAST of Carg12455 vs. TAIR10
Match: AT5G01640.1 (prenylated RAB acceptor 1.B5)

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-57
Identity = 115/212 (54.25%), Postives = 157/212 (74.06%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFR-------VFINHISESLRHGL 60
           +S++P +LPIS           +     +Q P+ T            F+N ++E++  GL
Sbjct: 2   VSTNPPVLPIS----------TTATDTTNQPPIVTAVVEXXXXXXXXFVNGVTETVCGGL 61

Query: 61  SQRKPWAELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLIL 120
           S+ +PW+EL DR+AF+KP+SLSEA  R RKN SYFRVNY+ +VALILGFSL++HPFSLIL
Sbjct: 62  SRSRPWSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLIL 121

Query: 121 LVGLLSSWIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLV 180
           L+ L +SW+FLYLFRPSD+PL++FGR+F + ETL  L+L ++ V+F TSVGSVL+SAL++
Sbjct: 122 LLCLAASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMI 181

Query: 181 GVALVCAHGAFRVPEDLFLDEQDNVSPGFLSF 206
           G+A +C HGAFR P+DLFLDEQD+ + GFLSF
Sbjct: 182 GIATICVHGAFRAPDDLFLDEQDHAASGFLSF 203

[Close]

BLAST of Carg12455 vs. Swiss-Prot
Match: sp|O80915|PR1B4_ARATH (PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.6e-70
Identity = 134/204 (65.69%), Postives = 169/204 (82.84%), Query Frame = 0


Query: 2   SSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAE 61
           SS+P +LPISNPQ+   +         SQ P+ TPAFR FIN I+E++++GLS+R+PWAE
Sbjct: 3   SSAPPVLPISNPQT---VXXXXXXXXXSQPPIATPAFRNFINQITETVKNGLSKRRPWAE 62

Query: 62  LADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSW 121
           LADR+A SKPES+S+A +RIRKNYSYF+VNYL V   I+GFSLV+HPFSL+ L+ LL+SW
Sbjct: 63  LADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASW 122

Query: 122 IFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAH 181
           +FLYLFRP+DQP+V+FGRTF D ETL  L+L S+FV+FLT VGSVLVSA+++GVAL+CAH
Sbjct: 123 LFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAH 182

Query: 182 GAFRVPEDLFLDEQDNVSPGFLSF 206
           GAFR PEDLFLDEQ+  + GFLSF
Sbjct: 183 GAFRAPEDLFLDEQEPAATGFLSF 203

[Close]

BLAST of Carg12455 vs. Swiss-Prot
Match: sp|Q9LYN0|PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.5e-62
Identity = 121/203 (59.61%), Postives = 159/203 (78.33%), Query Frame = 0


Query: 3   SSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAEL 62
           ++P  LP++N Q           ++QSQ P+ TPAFR F + +S S+R GLSQR+PW EL
Sbjct: 2   ATPPTLPVTNQQ-----------AVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTEL 61

Query: 63  ADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSWI 122
            DR++ ++PESL++A  RIRKN +YF+VNY+A+V+L+L FSL SHP SL++L+GLL  W+
Sbjct: 62  IDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWM 121

Query: 123 FLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAHG 182
           FLYLFRPSDQPLVVFGRTF D ETL+ LVL ++ VVF+TSVGS+L SAL++GVA+VC HG
Sbjct: 122 FLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHG 181

Query: 183 AFRVPEDLFLDEQDNVSPGFLSF 206
           AF VP+DLFLDEQ+  + G LSF
Sbjct: 182 AFVVPDDLFLDEQEPANAGLLSF 193

[Close]

BLAST of Carg12455 vs. Swiss-Prot
Match: sp|Q9SIY7|PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.4e-62
Identity = 122/205 (59.51%), Postives = 163/205 (79.51%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           MSSSPAILP++N Q+          + QSQ P+ + AFR F++ +S SLR  LSQR+PW 
Sbjct: 1   MSSSPAILPVTNQQA----------ATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWL 60

Query: 61  ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           EL DR++F++P+SL+++  RIRKN +YF+VNY A+V+L+L FSL+SHPFSL++L+ LL S
Sbjct: 61  ELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGS 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           W+FLYLFR SDQPLV+FGR+F D ETL+ LVL ++ VVF+TSVGS+L SAL +G+A+VC 
Sbjct: 121 WMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCL 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSF 206
           HGAFRVP+DLFLDEQ+  + G LSF
Sbjct: 181 HGAFRVPDDLFLDEQEPANAGLLSF 195

[Close]

BLAST of Carg12455 vs. Swiss-Prot
Match: sp|Q9FLB6|PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.9e-61
Identity = 123/205 (60.00%), Postives = 158/205 (77.07%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           M ++P  LPIS+          SGG  QSQ PV+TPAFR F++ +S S+R  LSQR+PW 
Sbjct: 1   MMANPPTLPISD---------HSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWL 60

Query: 61  ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           EL DR+A S+PESL++A  RIR+N  YF+VNY+ +V+L+L  SL+SHPFSL++L+ L  +
Sbjct: 61  ELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCA 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           WIFLYLFRPSDQPLVV GRTF D ETL +LV+L++ VVFLTSVGS+L SAL++G  +VC 
Sbjct: 121 WIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCL 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSF 206
           HGAFRVPEDLFLD+Q+  + G LSF
Sbjct: 181 HGAFRVPEDLFLDDQEPANTGLLSF 196

[Close]

BLAST of Carg12455 vs. Swiss-Prot
Match: sp|Q9M012|PR1B5_ARATH (PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 6.2e-56
Identity = 115/212 (54.25%), Postives = 157/212 (74.06%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFR-------VFINHISESLRHGL 60
           +S++P +LPIS           +     +Q P+ T            F+N ++E++  GL
Sbjct: 2   VSTNPPVLPIS----------TTATDTTNQPPIVTAVVEXXXXXXXXFVNGVTETVCGGL 61

Query: 61  SQRKPWAELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLIL 120
           S+ +PW+EL DR+AF+KP+SLSEA  R RKN SYFRVNY+ +VALILGFSL++HPFSLIL
Sbjct: 62  SRSRPWSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLIL 121

Query: 121 LVGLLSSWIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLV 180
           L+ L +SW+FLYLFRPSD+PL++FGR+F + ETL  L+L ++ V+F TSVGSVL+SAL++
Sbjct: 122 LLCLAASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMI 181

Query: 181 GVALVCAHGAFRVPEDLFLDEQDNVSPGFLSF 206
           G+A +C HGAFR P+DLFLDEQD+ + GFLSF
Sbjct: 182 GIATICVHGAFRAPDDLFLDEQDHAASGFLSF 203

[Close]

BLAST of Carg12455 vs. TrEMBL
Match: tr|A0A0A0LF69|A0A0A0LF69_CUCSA (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G730850 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.5e-94
Identity = 199/223 (89.24%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 2   SSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAE 61
           SSSPAILPISNPQS  + +  SGGS+QSQGPVTTPAFR FINH+SE LRHGLSQR+PWAE
Sbjct: 3   SSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAE 62

Query: 62  LADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSW 121
           LADRTAFSKPES SEATLRIRKNYSYFRVNYLAV+ALILGFSLVSHPFSLILL GLLSSW
Sbjct: 63  LADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVIALILGFSLVSHPFSLILLAGLLSSW 122

Query: 122 IFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAH 181
           +FLYLFRPSDQPLV+FGRTFKDSETLILLV+LSVFVVFLTSVGSVLVSAL+VGVALVCAH
Sbjct: 123 LFLYLFRPSDQPLVLFGRTFKDSETLILLVVLSVFVVFLTSVGSVLVSALMVGVALVCAH 182

Query: 182 GAFRVPEDLFLDEQDNVSPGFLSFXXXXXXXXXXXXXPVAART 225
           GAFRVPEDLFLDEQ+NVS GFLSF  XXXXXXXXXX PVAART
Sbjct: 183 GAFRVPEDLFLDEQENVSTGFLSFFSXXXXXXXXXXVPVAART 225

[Close]

BLAST of Carg12455 vs. TrEMBL
Match: tr|A0A1S3B5J4|A0A1S3B5J4_CUCME (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103486257 PE=3 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.4e-92
Identity = 199/223 (89.24%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 2   SSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAE 61
           SSSPAILPISNPQS  + +  SGGS+QSQGPVTTPAFR FINH+SE LRHGLSQR+PWAE
Sbjct: 3   SSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAE 62

Query: 62  LADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSW 121
           LADRTAFSKPES SEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILL GLLSSW
Sbjct: 63  LADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSW 122

Query: 122 IFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAH 181
           +FLYLFRPSDQPLV+FGRTFKDSETLILLV+ SVFV+FLTSVGSVLVSAL+VGVALVCAH
Sbjct: 123 LFLYLFRPSDQPLVLFGRTFKDSETLILLVVFSVFVIFLTSVGSVLVSALMVGVALVCAH 182

Query: 182 GAFRVPEDLFLDEQDNVSPGFLSFXXXXXXXXXXXXXPVAART 225
           GAFRVPEDLFLDEQ+NVS GFLSFXXXXXXXXXXXXX  AART
Sbjct: 183 GAFRVPEDLFLDEQENVSTGFLSFXXXXXXXXXXXXXXXAART 225

[Close]

BLAST of Carg12455 vs. TrEMBL
Match: tr|A0A218W377|A0A218W377_PUNGR (PRA1 family protein OS=Punica granatum OX=22663 GN=CDL15_Pgr000538 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 3.4e-75
Identity = 149/205 (72.68%), Postives = 177/205 (86.34%), Query Frame = 0


Query: 2   SSSPAILPISNPQSPA-ILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 61
           S+SP ILPISNPQ+ +   + A+G ++QSQ P+  PAFR FINH+S+SLRHGLSQR+PW 
Sbjct: 3   SASPPILPISNPQTTSTTANTAAGSAVQSQPPIANPAFRSFINHLSDSLRHGLSQRRPWT 62

Query: 62  ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 121
           ELADR+AFSKPES SEA LR+RKNYSYFRVNYLAVVALILGFSLV+HPFSL+LL GLL+S
Sbjct: 63  ELADRSAFSKPESFSEAALRVRKNYSYFRVNYLAVVALILGFSLVTHPFSLLLLAGLLAS 122

Query: 122 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 181
           W+FLYLFRP+D PLV+FGRT+ D ETL +LV+ S+ V+FLTSVGSVL+SALL GVA+VC 
Sbjct: 123 WLFLYLFRPADSPLVLFGRTYSDRETLGILVVFSIVVIFLTSVGSVLISALLAGVAVVCI 182

Query: 182 HGAFRVPEDLFLDEQDNVSPGFLSF 206
           HGAFR PEDLFLDE +  + GFLSF
Sbjct: 183 HGAFRAPEDLFLDEPEPAATGFLSF 207

[Close]

BLAST of Carg12455 vs. TrEMBL
Match: tr|A0A251JGN9|A0A251JGN9_MANES (PRA1 family protein OS=Manihot esculenta OX=3983 GN=MANES_13G070100 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.8e-74
Identity = 151/204 (74.02%), Postives = 178/204 (87.25%), Query Frame = 0


Query: 2   SSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAE 61
           S SP +LPISN Q     +AAS  S QSQ P+ TPAFR FIN IS+S+RHG+SQR+PWAE
Sbjct: 3   SPSPPVLPISNSQPS---NAASAASAQSQPPIATPAFRAFINQISDSVRHGISQRRPWAE 62

Query: 62  LADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSW 121
           LADR+AFSKPESLSEA LR+RKNYSYFRVNYLAV+ALIL FSL+SHP SL+LL+GLL++W
Sbjct: 63  LADRSAFSKPESLSEAALRVRKNYSYFRVNYLAVIALILAFSLLSHPLSLLLLLGLLAAW 122

Query: 122 IFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAH 181
           +FLYLFRPSD PLV+FGRTF D ETL LL+++SV VVFLTSVGSVL+SAL+VG+A+V AH
Sbjct: 123 LFLYLFRPSDPPLVLFGRTFTDRETLGLLIVVSVVVVFLTSVGSVLISALMVGLAIVFAH 182

Query: 182 GAFRVPEDLFLDEQDNVSPGFLSF 206
           G+FRVPEDLFLDEQ+ V+ GFLSF
Sbjct: 183 GSFRVPEDLFLDEQEPVATGFLSF 203

[Close]

BLAST of Carg12455 vs. TrEMBL
Match: tr|A0A067F7B6|A0A067F7B6_CITSI (PRA1 family protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027328mg PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 6.4e-74
Identity = 149/205 (72.68%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 2   SSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAE 61
           S+SP +LPISN Q     S+AS  S+QSQ PV TPAFR  INHIS+SLR+G +QR+PWAE
Sbjct: 3   SASPPVLPISNSQPTTTASSAS--SVQSQPPVATPAFRALINHISDSLRYGFAQRRPWAE 62

Query: 62  LADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSW 121
           LADR+AFSKPES SEATLRIRKNYSYFRVNYL VVA+++ FSL+++PFSL++LVGLL+SW
Sbjct: 63  LADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASW 122

Query: 122 IFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAH 181
           IFLYLFRPSDQPLVVFGRTF + ETL +L++LS+FV FLTSVGS+L+SA++VG  L+CAH
Sbjct: 123 IFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAH 182

Query: 182 GAFRVPEDLFLDEQD-NVSPGFLSF 206
           GAFRVPEDLFLDEQ+ + S GFLSF
Sbjct: 183 GAFRVPEDLFLDEQEPSASTGFLSF 205

The following BLAST results are available for this feature:

BLAST of Carg12455 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527930.1	2.4e-104	100.00	PRA1 family protein B4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022934319.1	1.2e-103	99.55	PRA1 family protein B4-like [Cucurbita moschata]	[more]
XP_022983331.1	3.5e-100	97.56	PRA1 family protein B4-like [Cucurbita maxima]	[more]
XP_022159363.1	5.3e-96	85.71	PRA1 family protein B4-like [Momordica charantia]	[more]
XP_004137695.1	2.2e-94	89.24	PREDICTED: PRA1 family protein B4 [Cucumis sativus] >KGN58721.1 hypothetical pro...	[more]

BLAST of Carg12455 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38360.1	4.2e-71	65.69	prenylated RAB acceptor 1.B4	[more]
AT3G56110.1	8.5e-64	59.61	prenylated RAB acceptor 1.B1	[more]
AT2G40380.1	2.5e-63	59.51	prenylated RAB acceptor 1.B2	[more]
AT5G05380.1	1.6e-62	60.00	prenylated RAB acceptor 1.B3	[more]
AT5G01640.1	3.4e-57	54.25	prenylated RAB acceptor 1.B5	[more]

BLAST of Carg12455 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O80915\|PR1B4_ARATH	7.6e-70	65.69	PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1	[more]
sp\|Q9LYN0\|PR1B1_ARATH	1.5e-62	59.61	PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1	[more]
sp\|Q9SIY7\|PR1B2_ARATH	4.4e-62	59.51	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]
sp\|Q9FLB6\|PR1B3_ARATH	2.9e-61	60.00	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]
sp\|Q9M012\|PR1B5_ARATH	6.2e-56	54.25	PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1	[more]

BLAST of Carg12455 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LF69\|A0A0A0LF69_CUCSA	1.5e-94	89.24	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G730850 PE=3 SV=1	[more]
tr\|A0A1S3B5J4\|A0A1S3B5J4_CUCME	1.4e-92	89.24	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103486257 PE=3 SV=1	[more]
tr\|A0A218W377\|A0A218W377_PUNGR	3.4e-75	72.68	PRA1 family protein OS=Punica granatum OX=22663 GN=CDL15_Pgr000538 PE=3 SV=1	[more]
tr\|A0A251JGN9\|A0A251JGN9_MANES	3.8e-74	74.02	PRA1 family protein OS=Manihot esculenta OX=3983 GN=MANES_13G070100 PE=3 SV=1	[more]
tr\|A0A067F7B6\|A0A067F7B6_CITSI	6.4e-74	72.68	PRA1 family protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027328mg PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004895	Prenylated_rab_accept_PRA1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12455-RA	Carg12455-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 53..195 e-value: 2.8E-48 score: 163.1
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..223
None	No IPR available	PANTHER	PTHR19317:SF34	PRA1 FAMILY PROTEIN B1-RELATED	coord: 1..223

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12455	Cla018020	Watermelon (97103) v1	carwmB0996
Carg12455	Cla012002	Watermelon (97103) v1	carwmB0999
Carg12455	Csa4G314420	Cucumber (Chinese Long) v2	carcuB1012
Carg12455	Csa3G730850	Cucumber (Chinese Long) v2	carcuB1011
Carg12455	MELO3C026026	Melon (DHL92) v3.5.1	carmeB0974
Carg12455	MELO3C009132	Melon (DHL92) v3.5.1	carmeB0973
Carg12455	ClCG04G006680	Watermelon (Charleston Gray)	carwcgB0975
Carg12455	ClCG10G022440	Watermelon (Charleston Gray)	carwcgB0971
Carg12455	CSPI03G30940	Wild cucumber (PI 183967)	carcpiB1035
Carg12455	Cucsa.130230	Cucumber (Gy14) v1	carcgyB1114
Carg12455	Cucsa.176730	Cucumber (Gy14) v1	carcgyB1116
Carg12455	CmaCh06G002120	Cucurbita maxima (Rimu)	carcmaB1388
Carg12455	CmaCh04G010890	Cucurbita maxima (Rimu)	carcmaB1386
Carg12455	CmaCh04G001240	Cucurbita maxima (Rimu)	carcmaB1385
Carg12455	CmaCh03G003210	Cucurbita maxima (Rimu)	carcmaB1384
Carg12455	CmaCh14G000400	Cucurbita maxima (Rimu)	carcmaB1380
Carg12455	CmoCh14G000360	Cucurbita moschata (Rifu)	carcmoB1335
Carg12455	CmoCh06G002040	Cucurbita moschata (Rifu)	carcmoB1343
Carg12455	CmoCh04G011540	Cucurbita moschata (Rifu)	carcmoB1341
Carg12455	CmoCh03G003330	Cucurbita moschata (Rifu)	carcmoB1340
Carg12455	Lsi01G015840	Bottle gourd (USVL1VR-Ls)	carlsiB911
Carg12455	Lsi03G022490	Bottle gourd (USVL1VR-Ls)	carlsiB915
Carg12455	Cp4.1LG01g11740	Cucurbita pepo (Zucchini)	carcpeB1388
Carg12455	Cp4.1LG08g12240	Cucurbita pepo (Zucchini)	carcpeB1393
Carg12455	Cp4.1LG10g07730	Cucurbita pepo (Zucchini)	carcpeB1383
Carg12455	Cp4.1LG01g05710	Cucurbita pepo (Zucchini)	carcpeB1387
Carg12455	Cp4.1LG03g03470	Cucurbita pepo (Zucchini)	carcpeB1391
Carg12455	CsGy3G028740	Cucumber (Gy14) v2	carcgybB0984
Carg12455	CsGy4G015520	Cucumber (Gy14) v2	carcgybB0985
Carg12455	MELO3C026026.2	Melon (DHL92) v3.6.1	carmedB0984
Carg12455	MELO3C009132.2	Melon (DHL92) v3.6.1	carmedB0983
Carg12455	CsaV3_4G026750	Cucumber (Chinese Long) v3	carcucB1042
Carg12455	CsaV3_3G033410	Cucumber (Chinese Long) v3	carcucB1041
Carg12455	Cla97C10G205770	Watermelon (97103) v2	carwmbB1050
Carg12455	Cla97C04G073280	Watermelon (97103) v2	carwmbB1054
Carg12455	Bhi11G001482	Wax gourd	carwgoB1166

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12455	Carg01124	Silver-seed gourd	carcarB200
Carg12455	Carg20020	Silver-seed gourd	carcarB517
Carg12455	Carg00191	Silver-seed gourd	carcarB573

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12455	Watermelon (97103) v2	carwmbB1051
Carg12455	Wax gourd	carwgoB1171
Carg12455	Cucurbita moschata (Rifu)	carcmoB1337
Carg12455	Wild cucumber (PI 183967)	carcpiB1036