CmoCh06G001100 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G001100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	26S proteasome non-ATPase regulatory subunit 4
Location	Cmo_Chr06 : 625580 .. 629211 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGGTTTCTCTGGTGAAGTGCTTCTTCAGTTCCAGACGTTCCGGCTTATTCTGCAAGAAACCTCAGTCTTCTGCCTTCTCTGCGATTCTCTGCTACTCCTTCGATTTCTCGGCGATTTCAATCTCTCAATATGGTGCTCGAGGTAGTTACTGATTACTGATCTCTTGTTCCAGATTGCAAATTTCATCCAGTTTTCCCCATTTCTTTGGAATTTCATTCTTCGCTACTTAGTTTAATGACCTTGAGTTTGTATGGATATGAAACTATCTTTTTTTTTTTTCGTTGCTTTTGGGTAGGCGACGATGATCTGTATCGACAATTCGGAATGGATGAGGAACGGCGATTATGCTCCTTCGCGATTTCAAGCTCAATCGGATGCCATTAGTCTCATTTGCGGAGCGAAGACTCAGGTGATTGATCGATTTCTCTTGTTTGACTATATTTCATTGTATGGATTCTTGGAAATCAAGGAATGTGGAGTCTTGATTTTACATTTTATGTTCTGTTTGGAGGGAAATTAGTTCTTCTGTCTCTTTGGCCTCCGTTGCTGTTTGGGGTTGTGAACTAGTTAGATTTATTGTATTGGTAGCTGTGAATTGGATTTTATTATGAAAAAACGAAATCACATTGCCGTCATTATCAAAATAGAAACTATCGTAATTAGTTTCTTCGAATTATCTGTTAGTCTCGCTATTTTTGTTTAAGCTATGGTTCTTTAGTTTTGAGGAAATTCTTTTCTCGTTTGCTTTTTTCCTTACAGTCTAACCCAGAGAATACAGTGGGAGTTCTTACAATGGCTGGAAAAGGGGTTCGGGTTTTGGTAACTCCTACAAGTGATCTTGGCAAGATTCTAGGGTGCATGCATGGTTAGTTCTTTTACTTGCCTTTTCTTTCAAGTTAGTTCCCTTTTTTGAGTTTGAGGCTTCTTATAATGCCATGGGAGATTACATGAAAACTTAGGCACAAGATATTTATATGTGATCGTTTCTGTATTTGAAAAAAATTGCAAAATTTTAAACAAGCTCCTTAGTTCTGTCGCTTTTCTGGATTGTGACTCTCTGTCTCATGACTAATGATGTTTTGGACAATCTTAAAGTGCATTTTGTACATTCTCTGTAACTCATAAGATGCAATACATGTAACCTTTTCATTGATCCCTATAGAATTCGATCATTTTATTTTTGATAGACTGTTCATTTCTGTCGTGCAGTTCTGTCGATTTTTCTGAATAATGAGATTTTAGATGACTAATGATATATACGCCTCTCTTTGAATAATTTTCCCTACGAAAAAAGTATATATCCTCCTAAATTCTTGAATTTGACACTATTGGGCTTTACACTTTTGATACGTTACACGCCATGTGTTGCTGGTTGTAAATTAATCTACAGTGAAGAGCTGTAGTCTTTTTTGCTAGATTTCTCACTACGCTCACTCTATAAAACTTTTAACATTTTTATTTTTTCCACACTAGGTTTAGAGATAGGTGGGGAGACAAACTTGGCTGCTGGGATCCAGGTGGCTCAGTTGGCTCTTAAGCATCGTCAGAATAAGAAGCAGCAACAAAGAATTATTGTTTTTGCGGGAAGGTAGGCTCTTGTATCCCTTTTATGCATGTTTATTGTGCCATCCCAGTTATCGATTGTTCTCAAGTACCTATCCTATGTGTTCTTAGTCCTGCTAAACAAGAAAAAAAGTTGTTGGAGATGATTGGAAAGAAATTAAAGAAGAACAACGTGGCACTTGATATCATTGATTTTGGTGAAGAAGATGATTGTAAGCCAGAGAAGCTGGAAGCCCTTCTTTCAGCTGTAAATAGTAATGATTCCAGTCACATTGTTCACGTTCCCTCTGGTCCAAATGCTCTTTCCGATGTACTTATTAGGTCAGTTGCTTCTTATTGTTTCCATTGTTGGACATAGTAAAATAGTACCCTCCATATGTTTTCTCAATCTCCCCTTCCATGTCAGTACACCAATCTTCACCAGCGATGGGGAGGGAGGAAGTGAATTTGCAGCAGCTTCAGCTGGTGGGGCCGGTTTTGATTTTGGTGTGGATCCCAACCTAGACCCTGAACTAGCACTTGCACTTCGAGTCTCAATGGAAGAGGAAAGGGCCAGACAGGAGGTGGCTGCTAAGAGATCTGCTGAGGAGACTTCAAAGCAGGAAAAAGGAGGGGAACTACCATCTGGCGCACAGGATACAACTATGAACGAACGTGCTAGTGCTGAATGTTCTGATGCTCAAAAGACAAGTGATCCAATGGTTGGTTTATCTTAAATTACATAAGTTCAAATGCTGCAATAGACTAATAGAATGTCCATTATTTCAAATATATCAATGACACTCGCTTCATTGCTTAGTTTACTTTCTCTTCTCACACTTTTTTTTGGAGAGGAGAGAATGTTCATACATAGCTTCTACTTTGTTCATGGCGACATTTTTATTGCCTTGACAACTTTATGGAAAATAGAAGTACATGCGAAGTTTTGATATTCAATCTGGATTTGATTACAGGAAGATGAGAATGCTCTGTTACAACAAGCCCTTGCAATGTCGATGGAAGATCCTGTCTCGAGTCATGAGATGCAGGATACTGAAATGTCAGATGCAACAATAGATGATCCAGAGTTAGCTCTGGGTATGGTTATTTACTTCAAGTTTACCCATTCTTTGTATTGAATGTATGTTCTAACTATCTTTTCCATCTTCGTTTACCGCTTGGGTGGTTGCAGCCCTCAAGTTGTCTGTGCAGGAGGATGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAATTACTGGCAGACCAGTCATTCGTATCCTCCATTCTTGCATCGGTATGAATTCTACAAGTTGCAAATACTTCTCTGAACTTATAGAATTACTATCAAATGATTCGGAGTATAGTTCAATTAGTTAAAACATATATTCTCAACCAACCGACTTAAGGTTTGAATCTTTCACTTCCACGTGTTGATCTCAAAAGTCATTCCAACCTGACCCTAAGAGAAACAAAAAAGTGGCTCCAACTACATGGTTTATGTTTAATCGACACAAGTGGAGATGTTTTGCAGCTTCCAGGGGTAGATCCAAATGATCCATCGGTCAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGGCAGAGGTTAGTTTGTGATTAGTTAAAAAACCATGAGATGTTGCAGTTACTTTTAACCAGGGGTTGATCCATTTGTGCTTGTATGCCTTGAAACACAAATACACAGAAGATTAAAATTGTAAATTGTTTTGAAATCTTGTTTAAGGACAAGAAGAATGAAGAAAAGCCCCCCAAGGAAGACGAGGAAAAATGATCCATGCATCCATCCATCCATCCATCTTCCGAAGCTGAATATTGTGCTAGGTATTTCTCCTCATACAAGTGTTGCATTGTGTTCGTTCATCTGCAAAAGTAGTCACTTTTTTTTGCTTTTGGTTGGGCTGAAAACAAGAATGTATCACTTTGATGAAACTTCATTTTGATCAAAAAACTTGTTCAGAATTGTTGATCAGGTCCCTAACGTTTACTTTTGATTTGTTAATGTATGATTATAAATTTGTCAATTTTATTATTATGATTATAAACTTGTTCAATTCTCACTCTCAC

mRNA sequence

TGAGGTTTCTCTGGTGAAGTGCTTCTTCAGTTCCAGACGTTCCGGCTTATTCTGCAAGAAACCTCAGTCTTCTGCCTTCTCTGCGATTCTCTGCTACTCCTTCGATTTCTCGGCGATTTCAATCTCTCAATATGGTGCTCGAGGCGACGATGATCTGTATCGACAATTCGGAATGGATGAGGAACGGCGATTATGCTCCTTCGCGATTTCAAGCTCAATCGGATGCCATTAGTCTCATTTGCGGAGCGAAGACTCAGTCTAACCCAGAGAATACAGTGGGAGTTCTTACAATGGCTGGAAAAGGGGTTCGGGTTTTGGTAACTCCTACAAGTGATCTTGGCAAGATTCTAGGGTGCATGCATGGTTTAGAGATAGGTGGGGAGACAAACTTGGCTGCTGGGATCCAGGTGGCTCAGTTGGCTCTTAAGCATCGTCAGAATAAGAAGCAGCAACAAAGAATTATTGTTTTTGCGGGAAGTCCTGCTAAACAAGAAAAAAAGTTGTTGGAGATGATTGGAAAGAAATTAAAGAAGAACAACGTGGCACTTGATATCATTGATTTTGGTGAAGAAGATGATTGTAAGCCAGAGAAGCTGGAAGCCCTTCTTTCAGCTGTAAATAGTAATGATTCCAGTCACATTGTTCACGTTCCCTCTGGTCCAAATGCTCTTTCCGATGTACTTATTAGTACACCAATCTTCACCAGCGATGGGGAGGGAGGAAGTGAATTTGCAGCAGCTTCAGCTGGTGGGGCCGGTTTTGATTTTGGTGTGGATCCCAACCTAGACCCTGAACTAGCACTTGCACTTCGAGTCTCAATGGAAGAGGAAAGGGCCAGACAGGAGGTGGCTGCTAAGAGATCTGCTGAGGAGACTTCAAAGCAGGAAAAAGGAGGGGAACTACCATCTGGCGCACAGGATACAACTATGAACGAACGTGCTAGTGCTGAATGTTCTGATGCTCAAAAGACAAGTGATCCAATGGAAGATGAGAATGCTCTGTTACAACAAGCCCTTGCAATGTCGATGGAAGATCCTGTCTCGAGTCATGAGATGCAGGATACTGAAATGTCAGATGCAACAATAGATGATCCAGAGTTAGCTCTGGCCCTCAAGTTGTCTGTGCAGGAGGATGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAATTACTGGCAGACCAGTCATTCGTATCCTCCATTCTTGCATCGCTTCCAGGGGTAGATCCAAATGATCCATCGGTCAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGGCAGAGGACAAGAAGAATGAAGAAAAGCCCCCCAAGGAAGACGAGGAAAAATGATCCATGCATCCATCCATCCATCCATCTTCCGAAGCTGAATATTGTGCTAGGTATTTCTCCTCATACAAGTGTTGCATTGTGTTCGTTCATCTGCAAAAGTAGTCACTTTTTTTTGCTTTTGGTTGGGCTGAAAACAAGAATGTATCACTTTGATGAAACTTCATTTTGATCAAAAAACTTGTTCAGAATTGTTGATCAGGTCCCTAACGTTTACTTTTGATTTGTTAATGTATGATTATAAATTTGTCAATTTTATTATTATGATTATAAACTTGTTCAATTCTCACTCTCAC

Coding sequence (CDS)

ATGGTGCTCGAGGCGACGATGATCTGTATCGACAATTCGGAATGGATGAGGAACGGCGATTATGCTCCTTCGCGATTTCAAGCTCAATCGGATGCCATTAGTCTCATTTGCGGAGCGAAGACTCAGTCTAACCCAGAGAATACAGTGGGAGTTCTTACAATGGCTGGAAAAGGGGTTCGGGTTTTGGTAACTCCTACAAGTGATCTTGGCAAGATTCTAGGGTGCATGCATGGTTTAGAGATAGGTGGGGAGACAAACTTGGCTGCTGGGATCCAGGTGGCTCAGTTGGCTCTTAAGCATCGTCAGAATAAGAAGCAGCAACAAAGAATTATTGTTTTTGCGGGAAGTCCTGCTAAACAAGAAAAAAAGTTGTTGGAGATGATTGGAAAGAAATTAAAGAAGAACAACGTGGCACTTGATATCATTGATTTTGGTGAAGAAGATGATTGTAAGCCAGAGAAGCTGGAAGCCCTTCTTTCAGCTGTAAATAGTAATGATTCCAGTCACATTGTTCACGTTCCCTCTGGTCCAAATGCTCTTTCCGATGTACTTATTAGTACACCAATCTTCACCAGCGATGGGGAGGGAGGAAGTGAATTTGCAGCAGCTTCAGCTGGTGGGGCCGGTTTTGATTTTGGTGTGGATCCCAACCTAGACCCTGAACTAGCACTTGCACTTCGAGTCTCAATGGAAGAGGAAAGGGCCAGACAGGAGGTGGCTGCTAAGAGATCTGCTGAGGAGACTTCAAAGCAGGAAAAAGGAGGGGAACTACCATCTGGCGCACAGGATACAACTATGAACGAACGTGCTAGTGCTGAATGTTCTGATGCTCAAAAGACAAGTGATCCAATGGAAGATGAGAATGCTCTGTTACAACAAGCCCTTGCAATGTCGATGGAAGATCCTGTCTCGAGTCATGAGATGCAGGATACTGAAATGTCAGATGCAACAATAGATGATCCAGAGTTAGCTCTGGCCCTCAAGTTGTCTGTGCAGGAGGATGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAATTACTGGCAGACCAGTCATTCGTATCCTCCATTCTTGCATCGCTTCCAGGGGTAGATCCAAATGATCCATCGGTCAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGGCAGAGGACAAGAAGAATGAAGAAAAGCCCCCCAAGGAAGACGAGGAAAAATGA

Homology

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BLAST of CmoCh06G001100 vs. Swiss-Prot
Match: PSMD4_ARATH (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana GN=RPN10 PE=1 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.8e-127
Identity = 256/406 (63.05%), Postives = 325/406 (80.05%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+PSR QAQ++A++L+CGAKTQSNPENTVG+LTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VL TPTSDLGKIL CMHGL++GGE NL A IQ+AQLALKHRQNK Q+QRIIVFAGSP K 
Sbjct: 61  VLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKY 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDD-CKPEKLEALLSAVNSNDSSHIVHVPSGPNA 180
           EKK LE++GK+LKKN+V+LDI++FGE+DD  KP+KLEALL+AVN+ND SHIVHVPSG NA
Sbjct: 121 EKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANA 180

Query: 181 LSDVLISTPIFTSDGEGGSEF----AAASAGGAGFDFGVDPNLDPELALALRVSMEEERA 240
           LSDVL+STP+FT D EG S +    AAA+A G  FDFGVDPN+DPELALALRVSMEEERA
Sbjct: 181 LSDVLLSTPVFTGD-EGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEERA 240

Query: 241 RQEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQAL 300
           RQE AAK++A+E  +++K G+  S +Q+T       A  +D  K ++PM++++ALL QA+
Sbjct: 241 RQEAAAKKAADEAGQKDKDGDTASASQETV------ARTTD--KNAEPMDEDSALLDQAI 300

Query: 301 AMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQ-EDAKDSTSQPDMSKLLADQSFV 360
           AMS         + D  MS+A  +D +LALAL++S+  E++ ++T     + LL +Q+F+
Sbjct: 301 AMS---------VGDVNMSEAADEDQDLALALQMSMSGEESSEATGAG--NNLLGNQAFI 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           SS+L+SLPGVDPNDP+VK+LLAS+  +SK  +++       EDE+K
Sbjct: 361 SSVLSSLPGVDPNDPAVKELLASLPDESKRTEEEESSSKKGEDEKK 386

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BLAST of CmoCh06G001100 vs. Swiss-Prot
Match: PSMD4_MOUSE (26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus GN=Psmd4 PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.3e-66
Identity = 169/404 (41.83%), Postives = 242/404 (59.90%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLE+TM+C+DNSE+MRNGD+ P+R QAQ DA++++C +KT+SNPEN VG++T+A     
Sbjct: 1   MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLAND-CE 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VL T T D G+IL  +H ++  G+     GI+VA LALKHRQ K  + RII F GSP + 
Sbjct: 61  VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDS--SHIVHVPSGPN 180
            +K L  + K+LKK  V +DII+FGEE+    EKL A ++ +N  D   SH+V VP GP+
Sbjct: 121 NEKDLVKLAKRLKKEKVNVDIINFGEEE-VNTEKLTAFVNTLNGKDGTGSHLVTVPPGPS 180

Query: 181 ALSDVLISTPIFTSDGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQE 240
            L+D LIS+PI    GEGG   A    G + F+FGVDP+ DPELALALRVSMEE+R RQE
Sbjct: 181 -LADALISSPILA--GEGG---AMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQE 240

Query: 241 VAAKRSAEETSKQEKGGELPSGAQDT-------TMNERASAECSDAQKTSDPMEDENALL 300
             A+R+A  ++ +   G    G +D+       T+N++          +S   E++ A  
Sbjct: 241 EEARRAAAASAAE--AGIATPGTEDSDDALLKMTINQQEFGRPGLPDLSSMTEEEQIAY- 300

Query: 301 QQALAMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQ 360
             A+ MS++    S E  D + S A                 D  D   + D   ++ D 
Sbjct: 301 --AMQMSLQGTEFSQESADMDASSAM----------------DTSDPVKEEDDYDVMQDP 360

Query: 361 SFVSSILASLPGVDPNDPSVKDLLASMQSQSKAE---DKKNEEK 393
            F+ S+L +LPGVDPN+ +++ ++ ++ SQ+  +   DKK EEK
Sbjct: 361 EFLQSVLENLPGVDPNNAAIRSVMGALASQATKDGKNDKKEEEK 375

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BLAST of CmoCh06G001100 vs. Swiss-Prot
Match: PSMD4_BOVIN (26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus GN=PSMD4 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 4.0e-66
Identity = 166/405 (40.99%), Postives = 249/405 (61.48%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLE+TM+C+DNSE+MRNGD+ P+R QAQ DA++++C +KT+SNPEN VG++T+A     
Sbjct: 1   MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCE 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VL T T D G+IL  +H ++  G+     GI+VA LALKHRQ K  + RII F GSP + 
Sbjct: 61  VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSND--SSHIVHVPSGPN 180
            +K L  + K+LKK  V +DII+FGEE +   EKL A ++ +N  D   SH+V VP GP 
Sbjct: 121 NEKDLVKLAKRLKKEKVNVDIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP- 180

Query: 181 ALSDVLISTPIFTSDGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQE 240
           +L+D LIS+PI    GEGG   A    G + F+FGVDP+ DPELALALRVSMEE+R RQE
Sbjct: 181 SLADALISSPILA--GEGG---AMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQE 240

Query: 241 VAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALAMS 300
             A+R+A  ++ +   G   +G +D        ++ +  + T    E     L    +M+
Sbjct: 241 EEARRAAAASAAE--AGIATAGTED--------SDDALLKMTISQQEFGRTGLPDLSSMT 300

Query: 301 MEDPVS---SHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVS 360
            E+ ++      +Q  E   A   D + + A+      D  + T + D   ++ D  F+ 
Sbjct: 301 EEEQIAYAMQMSLQGAEFGQAESADMDASSAM------DTSEPTKEEDDYDVMQDPEFLQ 360

Query: 361 SILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           S+L +LPGVDPN+ ++++ + S+ SQ+  + KK++++  K++E+K
Sbjct: 361 SVLENLPGVDPNNEAIRNAMGSLASQATKDGKKDKKEEDKKEEDK 381

[Close]

BLAST of CmoCh06G001100 vs. Swiss-Prot
Match: PSMD4_DICDI (26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum GN=psmD4 PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 5.2e-66
Identity = 166/393 (42.24%), Postives = 240/393 (61.07%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           M LEAT++C+DNSEWMRNGD+ PSR +AQ DA++LIC +KTQSNPE+ V +++MAGK   
Sbjct: 1   MTLEATIVCLDNSEWMRNGDFTPSRSEAQKDAVNLICASKTQSNPESAVSIMSMAGKKPE 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVT T +L KIL     L+I G+ + +  +Q+AQLAL+HRQN  Q  RII F GSP K+
Sbjct: 61  VLVTLTQELSKILSGAQELKINGKIDFSTTMQIAQLALRHRQNNHQHPRIIAFVGSPLKE 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
            K+ L  + K+LKKN VA+DII+FGE  +   +KLEA ++ VN+ND SH++ VP GP+ L
Sbjct: 121 TKEELIQLAKRLKKNGVAVDIINFGEVTE-NSDKLEAFINDVNNNDESHLLTVPPGPHIL 180

Query: 181 SDVLISTPIFTS-DGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEV 240
           SD+++ +PI  S  G+ GSEF             ++ + DP+LA+AL++S+EEE+ RQE 
Sbjct: 181 SDIILQSPIVESGSGQFGSEF-------------INADTDPDLAMALKLSLEEEKQRQE- 240

Query: 241 AAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALAMSM 300
             +R A E   +  GG   SG   TT         +  +   D   +++  L +ALA+SM
Sbjct: 241 -RERKARE---EANGGSTNSGTTTTT---------APTESNMDVNFEDDPELAEALALSM 300

Query: 301 EDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSSILA 360
               ++ +M+    +  T   P          Q+   D TS    S+   DQ F++S L 
Sbjct: 301 ----ATDKMEVQSSTTNTDSQP------PQQQQQPPTDDTS----SEAFKDQDFLNSTLN 349

Query: 361 SLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEK 393
           SLPGVDPN   +K+ L ++  + + +DK NE+K
Sbjct: 361 SLPGVDPN--RIKNALENLSKKDEDKDKDNEKK 349

[Close]

BLAST of CmoCh06G001100 vs. Swiss-Prot
Match: PSMD4_HUMAN (26S proteasome non-ATPase regulatory subunit 4 OS=Homo sapiens GN=PSMD4 PE=1 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 7.5e-65
Identity = 163/401 (40.65%), Postives = 244/401 (60.85%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLE+TM+C+DNSE+MRNGD+ P+R QAQ DA++++C +KT+SNPEN VG++T+A     
Sbjct: 1   MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLAND-CE 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VL T T D G+IL  +H ++  G+     GI+VA LALKHRQ K  + RII F GSP + 
Sbjct: 61  VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSND--SSHIVHVPSGPN 180
            +K L  + K+LKK  V +DII+FGEE +   EKL A ++ +N  D   SH+V VP GP 
Sbjct: 121 NEKDLVKLAKRLKKEKVNVDIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP- 180

Query: 181 ALSDVLISTPIFTSDGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQE 240
           +L+D LIS+PI    GEGG   A    G + F+FGVDP+ DPELALALRVSMEE+R RQE
Sbjct: 181 SLADALISSPILA--GEGG---AMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQE 240

Query: 241 VAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALAMS 300
             A+R+A  ++ +   G   +G +D        ++ +  + T    E     L    +M+
Sbjct: 241 EEARRAAAASAAE--AGIATTGTED--------SDDALLKMTISQQEFGRTGLPDLSSMT 300

Query: 301 MEDPVS---SHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVS 360
            E+ ++      +Q  E   A   D + + A+      D  +   + D   ++ D  F+ 
Sbjct: 301 EEEQIAYAMQMSLQGAEFGQAESADIDASSAM------DTSEPAKEEDDYDVMQDPEFLQ 360

Query: 361 SILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKE 397
           S+L +LPGVDPN+ ++++ + S+ SQ+  + KK++++  K+
Sbjct: 361 SVLENLPGVDPNNEAIRNAMGSLASQATKDGKKDKKEEDKK 377

[Close]

BLAST of CmoCh06G001100 vs. TrEMBL
Match: A0A0A0L1M0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002730 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 8.1e-191
Identity = 369/404 (91.34%), Postives = 384/404 (95.05%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DA++LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPA  
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGPNAL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTSDGEGGSEF----AAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFT DGEGGS F    AAASAGG GFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGGGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALA 300
           QE AAKR+A+ETSKQEKGGE PSG+QDTTMNERASAE SDAQKTSDPMEDENALLQQALA
Sbjct: 241 QEAAAKRAADETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTSDPMEDENALLQQALA 300

Query: 301 MSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSS 360
           MSMEDP SS +++DTEMSDA + DPELALAL+LSVQE++KDSTSQPDMSKLLADQSFVSS
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAM-DPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           ILASLPGVDPNDPSVKDLLASMQSQSK EDKKNEE PPKED++K
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDK 402

[Close]

BLAST of CmoCh06G001100 vs. TrEMBL
Match: A0A0A0KGP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507050 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 1.3e-169
Identity = 332/405 (81.98%), Postives = 364/405 (89.88%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAI+LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAINLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPT+DLGKIL CMHGLEIGGE NLAAGIQVAQLALKHRQNKKQQQRIIVF GSP K 
Sbjct: 61  VLVTPTTDLGKILACMHGLEIGGEINLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPVKH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIG+KLKKNNVALDI+DFGEEDD KPEKLE+LL+AVNSND+SHIVHVP+GPN L
Sbjct: 121 EKKLLEMIGRKLKKNNVALDIVDFGEEDDGKPEKLESLLAAVNSNDTSHIVHVPAGPNVL 180

Query: 181 SDVLISTPIFTSDGEGGSEFAAASA-----GGAGFDFGVDPNLDPELALALRVSMEEERA 240
           SDVLISTPIFT DGEGGS FAAA+A     G +GFDFGVDPNLDPELALALRVSMEEERA
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFDFGVDPNLDPELALALRVSMEEERA 240

Query: 241 RQEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQ-KTSDPMEDENALLQQA 300
           RQE AAK++AEE +KQEKG E PSG+QD TM ER+    SDA+ K +D M+DENALLQQA
Sbjct: 241 RQEAAAKKAAEENTKQEKGAEQPSGSQDATMTERSGLATSDAENKAADLMDDENALLQQA 300

Query: 301 LAMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFV 360
           LAMSM++P  + +++D +MS+A  DDPELALAL+LSVQE + DS+SQ DMSKLLADQSFV
Sbjct: 301 LAMSMDNPSGTSDIRDIDMSEAASDDPELALALQLSVQEGSSDSSSQTDMSKLLADQSFV 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEE 400
           SSILASLPGVDPNDPSVKDLLASMQSQ  AEDKK+EEK  KEDE+
Sbjct: 361 SSILASLPGVDPNDPSVKDLLASMQSQ--AEDKKDEEKSSKEDEK 403

[Close]

BLAST of CmoCh06G001100 vs. TrEMBL
Match: V7CH05_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G264300g PE=4 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 3.9e-169
Identity = 329/403 (81.64%), Postives = 368/403 (91.32%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DA++LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKIL CMHGLEIGGE NLAAGIQVAQLALKHRQNKKQQQRIIVFAGSP K 
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKK+LEMIG+KLKKN+VALDI++FGEED+ K EKLEALLSAVN+ND+SHIVHVPSGPNAL
Sbjct: 121 EKKMLEMIGRKLKKNSVALDIVNFGEEDEGKNEKLEALLSAVNNNDTSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTSDGEGGSEFAAASAGG--AGFDFGVDPNLDPELALALRVSMEEERARQE 240
           SDVLISTPIFT DGEGGS FAAA+A G  +GF+FGVDPNLDPELALALRVSMEEERARQE
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQE 240

Query: 241 VAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDA-QKTSDPMEDENALLQQALAM 300
            AAK++AE+TSKQEKG E  +  QDTTM E ASA  S+A  K +D  +DENALLQQALAM
Sbjct: 241 AAAKKAAEDTSKQEKGDEQKASPQDTTMTEGASAATSEANNKKTDLTDDENALLQQALAM 300

Query: 301 SMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSSI 360
           SM+DP  SH+++DT+MS+A  DDPELALAL+LSV++ +KDSTSQ D+SKLLADQSFVSSI
Sbjct: 301 SMDDPAISHDVRDTDMSEAAADDPELALALQLSVEDSSKDSTSQSDVSKLLADQSFVSSI 360

Query: 361 LASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           LASLPGVDPNDPSVKDLLASMQ+QS+ + +KNE+KPP E+E+K
Sbjct: 361 LASLPGVDPNDPSVKDLLASMQNQSEPQ-QKNEDKPPNEEEKK 402

[Close]

BLAST of CmoCh06G001100 vs. TrEMBL
Match: W9T0R3_9ROSA (26S proteasome non-ATPase regulatory subunit 4 OS=Morus notabilis GN=L484_026664 PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 1.9e-168
Identity = 326/405 (80.49%), Postives = 360/405 (88.89%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+PSRFQAQSDA++LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKIL CMHGLEIGGE NLAAGIQVAQLALKHRQNKKQQQRIIVF GSP K 
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIG+KLKKN+VALDI++FGEEDD K EKLEALL+AVN+ND+SHIVHVP GPN L
Sbjct: 121 EKKLLEMIGRKLKKNSVALDIVNFGEEDDGKTEKLEALLAAVNNNDTSHIVHVPPGPNVL 180

Query: 181 SDVLISTPIFTSDGEGGSEFAAASA-----GGAGFDFGVDPNLDPELALALRVSMEEERA 240
           SDVLISTPIFT DGEG S F AASA     G +GFDFGVDPNLDPELALALRVSMEEERA
Sbjct: 181 SDVLISTPIFTGDGEGASGFVAASAAAAAGGASGFDFGVDPNLDPELALALRVSMEEERA 240

Query: 241 RQEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDA-QKTSDPMEDENALLQQA 300
           RQE AAK++AEE +KQEKGGE PS +QD TM ERA+   S A  K +D M+DENALLQQA
Sbjct: 241 RQEAAAKKAAEEAAKQEKGGEQPSSSQDATMTERATTPASGADNKATDLMDDENALLQQA 300

Query: 301 LAMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFV 360
           LAMSM+DP SSH+++DT+MS+A   DPELALAL+LS Q+  KDS++  DMSKLLADQSFV
Sbjct: 301 LAMSMDDPASSHDVRDTDMSEAAAVDPELALALQLSAQDSTKDSSNPADMSKLLADQSFV 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEE 400
           SSILASLPGVDPNDPSVKDLLASMQSQS+ + KKNE+K PKE+++
Sbjct: 361 SSILASLPGVDPNDPSVKDLLASMQSQSETDKKKNEDKEPKEEDK 405

[Close]

BLAST of CmoCh06G001100 vs. TrEMBL
Match: D7SNX7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03620 PE=4 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 7.4e-168
Identity = 321/404 (79.46%), Postives = 362/404 (89.60%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+P+RFQAQ+DA++LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPTRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKIL CMHGLE+GGE NLAAGIQVAQLALKHRQNKKQQQRIIVFAGSP K 
Sbjct: 61  VLVTPTSDLGKILACMHGLEVGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKY 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           +KK+LEMIG+KLKKN+VA+DI+DFGE+DD KPEKLEALL +VN+NDSSHIVHVP+GPNAL
Sbjct: 121 DKKVLEMIGRKLKKNSVAIDIVDFGEDDDGKPEKLEALLGSVNNNDSSHIVHVPAGPNAL 180

Query: 181 SDVLISTPIFTSDGEGGSEFAAASA-----GGAGFDFGVDPNLDPELALALRVSMEEERA 240
           SDVLISTPIFT DGEGGS FAAA+A     G AGFDFGVDPNLDPELALALRVSMEEERA
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVAGFDFGVDPNLDPELALALRVSMEEERA 240

Query: 241 RQEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQAL 300
           RQE AAK++AEE S+QEK GE  S +QD TM E A+   SDA K SD M+DENALLQQAL
Sbjct: 241 RQEAAAKKAAEEASRQEKEGEQQSSSQDATMTEHANVAASDADKKSDLMDDENALLQQAL 300

Query: 301 AMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVS 360
           AMSM+DP +S  M+DT+MS+A  DD +LALAL+LSVQ+  KDSTSQ DMSKLL DQ+FVS
Sbjct: 301 AMSMDDPATSLAMRDTDMSEAAADDQDLALALQLSVQDTGKDSTSQTDMSKLLTDQTFVS 360

Query: 361 SILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEE 400
           SILASLPGVDPNDPSVKDLLASMQ++S+++ KKNE+K P E+++
Sbjct: 361 SILASLPGVDPNDPSVKDLLASMQNESESQQKKNEDKAPDEEDK 404

[Close]

BLAST of CmoCh06G001100 vs. TAIR10
Match: AT4G38630.1 (AT4G38630.1 regulatory particle non-ATPase 10)

HSP 1 Score: 457.2 bits (1175), Expect = 1.0e-128
Identity = 256/406 (63.05%), Postives = 325/406 (80.05%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+PSR QAQ++A++L+CGAKTQSNPENTVG+LTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VL TPTSDLGKIL CMHGL++GGE NL A IQ+AQLALKHRQNK Q+QRIIVFAGSP K 
Sbjct: 61  VLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKY 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDD-CKPEKLEALLSAVNSNDSSHIVHVPSGPNA 180
           EKK LE++GK+LKKN+V+LDI++FGE+DD  KP+KLEALL+AVN+ND SHIVHVPSG NA
Sbjct: 121 EKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANA 180

Query: 181 LSDVLISTPIFTSDGEGGSEF----AAASAGGAGFDFGVDPNLDPELALALRVSMEEERA 240
           LSDVL+STP+FT D EG S +    AAA+A G  FDFGVDPN+DPELALALRVSMEEERA
Sbjct: 181 LSDVLLSTPVFTGD-EGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEERA 240

Query: 241 RQEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQAL 300
           RQE AAK++A+E  +++K G+  S +Q+T       A  +D  K ++PM++++ALL QA+
Sbjct: 241 RQEAAAKKAADEAGQKDKDGDTASASQETV------ARTTD--KNAEPMDEDSALLDQAI 300

Query: 301 AMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQ-EDAKDSTSQPDMSKLLADQSFV 360
           AMS         + D  MS+A  +D +LALAL++S+  E++ ++T     + LL +Q+F+
Sbjct: 301 AMS---------VGDVNMSEAADEDQDLALALQMSMSGEESSEATGAG--NNLLGNQAFI 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           SS+L+SLPGVDPNDP+VK+LLAS+  +SK  +++       EDE+K
Sbjct: 361 SSVLSSLPGVDPNDPAVKELLASLPDESKRTEEEESSSKKGEDEKK 386

[Close]

BLAST of CmoCh06G001100 vs. NCBI nr
Match: gi|449456821|ref|XP_004146147.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis sativus])

HSP 1 Score: 674.5 bits (1739), Expect = 1.2e-190
Identity = 369/404 (91.34%), Postives = 384/404 (95.05%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DA++LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPA  
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGPNAL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTSDGEGGSEF----AAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFT DGEGGS F    AAASAGG GFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGGGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALA 300
           QE AAKR+A+ETSKQEKGGE PSG+QDTTMNERASAE SDAQKTSDPMEDENALLQQALA
Sbjct: 241 QEAAAKRAADETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTSDPMEDENALLQQALA 300

Query: 301 MSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSS 360
           MSMEDP SS +++DTEMSDA + DPELALAL+LSVQE++KDSTSQPDMSKLLADQSFVSS
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAM-DPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           ILASLPGVDPNDPSVKDLLASMQSQSK EDKKNEE PPKED++K
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDK 402

[Close]

BLAST of CmoCh06G001100 vs. NCBI nr
Match: gi|659095348|ref|XP_008448534.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis melo])

HSP 1 Score: 674.5 bits (1739), Expect = 1.2e-190
Identity = 369/403 (91.56%), Postives = 384/403 (95.29%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DA++LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPA  
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGPNAL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTSDGEGGSEF----AAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFT DGEGGS F    AAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALA 300
           QE AAKR+AEETSKQEKGGE PSG+QDTTMNERASAE SDAQKT+DPMEDENALLQQALA
Sbjct: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA 300

Query: 301 MSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSS 360
           MSMEDP SS +++DTEMSDA + DPELALAL+LSVQE++KDSTSQPDMSKLLADQSFVSS
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAM-DPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEE 400
           ILASLPGVDPNDPSVKDLLASMQSQSK EDKKNEE PPKED++
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDK 401

[Close]

BLAST of CmoCh06G001100 vs. NCBI nr
Match: gi|449434144|ref|XP_004134856.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis sativus])

HSP 1 Score: 604.0 bits (1556), Expect = 1.9e-169
Identity = 332/405 (81.98%), Postives = 364/405 (89.88%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAI+LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAINLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPT+DLGKIL CMHGLEIGGE NLAAGIQVAQLALKHRQNKKQQQRIIVF GSP K 
Sbjct: 61  VLVTPTTDLGKILACMHGLEIGGEINLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPVKH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIG+KLKKNNVALDI+DFGEEDD KPEKLE+LL+AVNSND+SHIVHVP+GPN L
Sbjct: 121 EKKLLEMIGRKLKKNNVALDIVDFGEEDDGKPEKLESLLAAVNSNDTSHIVHVPAGPNVL 180

Query: 181 SDVLISTPIFTSDGEGGSEFAAASA-----GGAGFDFGVDPNLDPELALALRVSMEEERA 240
           SDVLISTPIFT DGEGGS FAAA+A     G +GFDFGVDPNLDPELALALRVSMEEERA
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFDFGVDPNLDPELALALRVSMEEERA 240

Query: 241 RQEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQ-KTSDPMEDENALLQQA 300
           RQE AAK++AEE +KQEKG E PSG+QD TM ER+    SDA+ K +D M+DENALLQQA
Sbjct: 241 RQEAAAKKAAEENTKQEKGAEQPSGSQDATMTERSGLATSDAENKAADLMDDENALLQQA 300

Query: 301 LAMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFV 360
           LAMSM++P  + +++D +MS+A  DDPELALAL+LSVQE + DS+SQ DMSKLLADQSFV
Sbjct: 301 LAMSMDNPSGTSDIRDIDMSEAASDDPELALALQLSVQEGSSDSSSQTDMSKLLADQSFV 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEE 400
           SSILASLPGVDPNDPSVKDLLASMQSQ  AEDKK+EEK  KEDE+
Sbjct: 361 SSILASLPGVDPNDPSVKDLLASMQSQ--AEDKKDEEKSSKEDEK 403

[Close]

BLAST of CmoCh06G001100 vs. NCBI nr
Match: gi|659080520|ref|XP_008440835.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis melo])

HSP 1 Score: 603.2 bits (1554), Expect = 3.3e-169
Identity = 332/405 (81.98%), Postives = 363/405 (89.63%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAI+LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAINLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPT+DLGKIL CMHGLEIGGE NLAAGIQVAQLALKHRQNKKQQQRIIVF GSP K 
Sbjct: 61  VLVTPTTDLGKILACMHGLEIGGEINLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPVKH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIG+KLKKNNVALDI+DFGEEDD KPEKLE+LL+AVNSND+SHIVHVP+GPN L
Sbjct: 121 EKKLLEMIGRKLKKNNVALDIVDFGEEDDGKPEKLESLLAAVNSNDTSHIVHVPAGPNVL 180

Query: 181 SDVLISTPIFTSDGEGGSEFAAASA-----GGAGFDFGVDPNLDPELALALRVSMEEERA 240
           SDVLISTPIFT DGEGGS FAAA+A     G +GFDFGVDPNLDPELALALRVSMEEERA
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFDFGVDPNLDPELALALRVSMEEERA 240

Query: 241 RQEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQ-KTSDPMEDENALLQQA 300
           RQE AAK++AEE +KQEKG E PSG+QD TM ER     SDA+ K +D M+DENALLQQA
Sbjct: 241 RQEAAAKKAAEENTKQEKGAEQPSGSQDATMTERPGLATSDAENKAADLMDDENALLQQA 300

Query: 301 LAMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFV 360
           LAMSM++P  + +++D +MS+A  DDPELALAL+LSVQE + DS+SQ DMSKLLADQSFV
Sbjct: 301 LAMSMDNPSGTSDIRDIDMSEAASDDPELALALQLSVQEGSSDSSSQTDMSKLLADQSFV 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEE 400
           SSILASLPGVDPNDPSVKDLLASMQSQ  AEDKK+EEK  KEDE+
Sbjct: 361 SSILASLPGVDPNDPSVKDLLASMQSQ--AEDKKDEEKSSKEDEK 403

[Close]

BLAST of CmoCh06G001100 vs. NCBI nr
Match: gi|593786263|ref|XP_007156172.1| (hypothetical protein PHAVU_003G264300g [Phaseolus vulgaris])

HSP 1 Score: 602.4 bits (1552), Expect = 5.6e-169
Identity = 329/403 (81.64%), Postives = 368/403 (91.32%), Query Frame = 1


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DA++LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKIL CMHGLEIGGE NLAAGIQVAQLALKHRQNKKQQQRIIVFAGSP K 
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKK+LEMIG+KLKKN+VALDI++FGEED+ K EKLEALLSAVN+ND+SHIVHVPSGPNAL
Sbjct: 121 EKKMLEMIGRKLKKNSVALDIVNFGEEDEGKNEKLEALLSAVNNNDTSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTSDGEGGSEFAAASAGG--AGFDFGVDPNLDPELALALRVSMEEERARQE 240
           SDVLISTPIFT DGEGGS FAAA+A G  +GF+FGVDPNLDPELALALRVSMEEERARQE
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQE 240

Query: 241 VAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDA-QKTSDPMEDENALLQQALAM 300
            AAK++AE+TSKQEKG E  +  QDTTM E ASA  S+A  K +D  +DENALLQQALAM
Sbjct: 241 AAAKKAAEDTSKQEKGDEQKASPQDTTMTEGASAATSEANNKKTDLTDDENALLQQALAM 300

Query: 301 SMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSSI 360
           SM+DP  SH+++DT+MS+A  DDPELALAL+LSV++ +KDSTSQ D+SKLLADQSFVSSI
Sbjct: 301 SMDDPAISHDVRDTDMSEAAADDPELALALQLSVEDSSKDSTSQSDVSKLLADQSFVSSI 360

Query: 361 LASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           LASLPGVDPNDPSVKDLLASMQ+QS+ + +KNE+KPP E+E+K
Sbjct: 361 LASLPGVDPNDPSVKDLLASMQNQSEPQ-QKNEDKPPNEEEKK 402

The following BLAST results are available for this feature:

BLAST of CmoCh06G001100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSMD4_ARATH	1.8e-127	63.05	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana G...	[more]
PSMD4_MOUSE	2.3e-66	41.83	26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus GN=Psmd4 PE=1 SV=...	[more]
PSMD4_BOVIN	4.0e-66	40.99	26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus GN=PSMD4 PE=2 SV=1	[more]
PSMD4_DICDI	5.2e-66	42.24	26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum GN=ps...	[more]
PSMD4_HUMAN	7.5e-65	40.65	26S proteasome non-ATPase regulatory subunit 4 OS=Homo sapiens GN=PSMD4 PE=1 SV=...	[more]

BLAST of CmoCh06G001100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1M0_CUCSA	8.1e-191	91.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002730 PE=4 SV=1	[more]
A0A0A0KGP9_CUCSA	1.3e-169	81.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507050 PE=4 SV=1	[more]
V7CH05_PHAVU	3.9e-169	81.64	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G264300g PE=4 SV=1	[more]
W9T0R3_9ROSA	1.9e-168	80.49	26S proteasome non-ATPase regulatory subunit 4 OS=Morus notabilis GN=L484_026664...	[more]
D7SNX7_VITVI	7.4e-168	79.46	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03620 PE=4 SV=...	[more]

BLAST of CmoCh06G001100 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38630.1	1.0e-128	63.05	regulatory particle non-ATPase 10	[more]

BLAST of CmoCh06G001100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456821\|ref\|XP_004146147.1\|	1.2e-190	91.34	PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis sativ...	[more]
gi\|659095348\|ref\|XP_008448534.1\|	1.2e-190	91.56	PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis melo]	[more]
gi\|449434144\|ref\|XP_004134856.1\|	1.9e-169	81.98	PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis sativ...	[more]
gi\|659080520\|ref\|XP_008440835.1\|	3.3e-169	81.98	PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis melo]	[more]
gi\|593786263\|ref\|XP_007156172.1\|	5.6e-169	81.64	hypothetical protein PHAVU_003G264300g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002035	VWF_A
IPR003903	UIM_dom
IPR027040	Proteasome subunit Rpn10

Vocabulary: **Cellular Component**
Term	Definition
GO:0008540	proteasome regulatory particle, base subcomplex

Vocabulary: **Biological Process**
Term	Definition
GO:0006511	ubiquitin-dependent protein catabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006952	defense response
biological_process	GO:0009607	response to biotic stimulus
biological_process	GO:0008150	biological_process
cellular_component	GO:0008540	proteasome regulatory particle, base subcomplex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000502	proteasome complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005516	calmodulin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G001100.1	CmoCh06G001100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002035	von Willebrand factor, type A	GENE3D	G3DSA:3.40.50.410		coord: 7..178 score: 2.
IPR002035	von Willebrand factor, type A	PFAM	PF13519	VWA_2	coord: 6..115 score: 1.3
IPR002035	von Willebrand factor, type A	SMART	SM00327	VWA_4	coord: 2..175 score: 3.0
IPR002035	von Willebrand factor, type A	PROFILE	PS50234	VWFA	coord: 5..189 score: 11
IPR002035	von Willebrand factor, type A	unknown	SSF53300	vWA-like	coord: 4..175 score: 1.54
IPR003903	Ubiquitin interacting motif	PFAM	PF02809	UIM	coord: 219..232 score: 0.53coord: 319..333 score: 0.33coord: 286..301 score:
IPR003903	Ubiquitin interacting motif	SMART	SM00726	uim	coord: 286..305 score: 0.64coord: 318..337 score: 0.56coord: 217..236 score:
IPR003903	Ubiquitin interacting motif	PROFILE	PS50330	UIM	coord: 217..236 score: 8.935coord: 286..305 score: 9
IPR027040	Proteasome subunit Rpn10	PANTHER	PTHR10223	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4	coord: 1..399 score: 8.0E
None	No IPR available	PANTHER	PTHR10223:SF0	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4	coord: 1..399 score: 8.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G001100	Cucsa.322690	Cucumber (Gy14) v1	cgycmoB0894
CmoCh06G001100	CmaCh16G012410	Cucurbita maxima (Rimu)	cmacmoB342
CmoCh06G001100	CmaCh06G001180	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G001100	Cla008905	Watermelon (97103) v1	cmowmB775
CmoCh06G001100	Csa3G002730	Cucumber (Chinese Long) v2	cmocuB817
CmoCh06G001100	MELO3C013760	Melon (DHL92) v3.5.1	cmomeB757
CmoCh06G001100	ClCG10G000640	Watermelon (Charleston Gray)	cmowcgB731
CmoCh06G001100	CSPI03G00680	Wild cucumber (PI 183967)	cmocpiB825
CmoCh06G001100	Lsi07G010960	Bottle gourd (USVL1VR-Ls)	cmolsiB767
CmoCh06G001100	Cp4.1LG14g10320	Cucurbita pepo (Zucchini)	cmocpeB769
CmoCh06G001100	Cp4.1LG08g13090	Cucurbita pepo (Zucchini)	cmocpeB797
CmoCh06G001100	MELO3C013760.2	Melon (DHL92) v3.6.1	cmomedB862
CmoCh06G001100	CsaV3_3G000720	Cucumber (Chinese Long) v3	cmocucB0963
CmoCh06G001100	Cla97C10G185220	Watermelon (97103) v2	cmowmbB820
CmoCh06G001100	CsGy3G000640	Cucumber (Gy14) v2	cgybcmoB411
CmoCh06G001100	Carg19470	Silver-seed gourd	carcmoB0583
CmoCh06G001100	Carg01211	Silver-seed gourd	carcmoB0227

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh06G001100	CmoCh16G012880	Cucurbita moschata (Rifu)	cmocmoB292

The following block(s) are covering this gene:

None