Cla008905 (gene) Watermelon (97103) v1

Overview
NameCla008905
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
Description26S proteasome non-ATPase regulatory subunit 4 (AHRD V1 ***- B6TK61_MAIZE); contains Interpro domain(s) IPR002035 von Willebrand factor, type A
LocationChr10 : 1660558 .. 1664190 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCTCGAGGTACTTACTCATCACTATTTTCTTTTTCCAATCTCATTTTTCTCTACTCAGTTTAACGACCTAGGGTTCTATGGATATCAAACTACTTTTCCTTTCTTTTTGGTAGGCTACAATGATCTGCATCGACAATTCCGAATGGATGAGGAACGGCGATTATGCTCCTTCCAGATTCCAAGCCCAAGCCGATGCCGTTAATCTCATTTGCGGAGCTAAAACCCAGGTGATTCATCGATTTCTCTTCTTCTGATTATGTTTTCCTTGTCTCGGTGCTGGAAACGGAAGAAGGAATATGTCCTGATTGGAGTAAAATTCCGTGAAATTTCTTTTACTATCTCTTTTGCCTCTGTTGCCTTTTGGGGTTTTAATCAGGTAGCTGGGAATTGAGTTGCAGTTAGGGTTATTTACATTTTTCTTTCTTAATATATGATTCTGAAGTTTTGATGAATGTACTTGATCGTTTGCTGTTTTGTTAACAGTCTAACCCGGAGAATACAGTAGGAGTTCTTACAATGGCCGGAAAAGGGGTTCGGGTTTTGGTAACTCCTACAAGTGATCTTGGCAAGATTCTAGCGTGCATGCACGGTTAATTCATCTACTTGCCTTTTCTATGAAGTTAACCCCCGTTCTTGCCATATAAGTTTGAGGTTTCTTAAAATGTTACATTATCTGTCGTATGGCTATTTATGTTTTGGACACTTTAGAGTGCATTTTATTCGCCATCTATATGCAACAGATTATTTCTCAACAGAAACACTGTTTATTATATGTGTGTGAGTGTGTGTATATATAAAAGATGACTGCTGATGTAAGTTTTTTACGTATAATTTCTGTAGGAAAAAATAATAAATCTGATAGAGTTCTCGTTACAATTTTTCAAGTTGGTGCCATTAGTTAGAACATTGGGAATAATTCTTGAGGTAATTATTAGGTATGCTATAAGTTAGAACATTGGGAATAATTTGTGTTGGGAATAATTTGTGTTGTAATACCCCTTGTTTGGGCTCTCATGTAACAGATATCTCTGGATATTTCATTCAATCAATGAGATTGTTTCTTATCCCAAAAAAAAAGAAATTTATTGTAATTAAAAATGCTTAATGGTCTACTTTCACTCGTTAGATGGATTAGATGTAATGCATGATAACTCTTACTTTGATCCCTATTGAAGTCAATGAATTTTTTTTTTTGTTAGTGCAGTTCATTCATTTCTCCTCGTATTTTTGTCGTTTTTTTTGTGAATCATCTTAGATGACTGTTGATATGATTTTCTCTTTAAATATTTTTCCCAAAGAAAAACATCTATCCCCAACGTTCTTAGGAGTGAGTACTGTCCAATTTCAAGGTATTGAACAGCATTTTGGTTATCAGAAATTCTTTGGTCTTCACTCTTTTGATGCATCAGATTTGGTTGGTTTGTACAATAACCCCCAGCAAAGTGCTGTTGATCTTTGTTTCTAGCTTTCTCACTTTGCTTTCTCCTCTATAGAACTTAGCATCTTTCTTTTTTGCACAATAGGTTTAGAGATAGGTGGAGAGACAAACTTGGCTGCTGGGATTCAGGTGGCTCAGTTGGCTCTGAAGCATCGTCAAAACAAGAAGCAACAACAAAGAATTATTGTTTTTGCAGGAAGGTAGGCACTTCTTGTCTATCCTTTTTTTTTTTTTTGTATTTTTATTGTGCAGTTCCAGTTATTGATTGTTCTCACATCATCTAACTTATGTCTTCTTAGTCCTGCCAATCATGAAAAGAAGTTGTTGGAGATGATTGGAAAGAAATTAAAAAAGAACAATGTGGCACTAGATATTATTGATTTTGGTGAAGAAGATGATGGTAAGCCAGAGAAGCTGGAAGCCCTTCTTTCGGCTGTAAATAGTAACGACTCCAGTCACATTGTTCATGTTCCCTCAGGTCCAAATGCTCTTTCTGATGTACTTATTAGGTCAGTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCCCTCTCTCTGTGCTTGGAGGAGACTGTGATTCTTATTGCTTCCATTTGTTCCCTATTGTTTGACATAGTAAAATATTATCTCCATGTGTCTTCACAATTTCTCCTTCTATGTCAGTACTCCAATCTTCACTGGTGATGGGGAGGGAGGAAGTGGATTTGCTGCAGCTGCTGCTGCAGCTTCAGCTGGTGGGGCCGGTTTTGATTTTGGTGTGGATCCCAACTTAGACCCTGAACTAGCACTTGCACTTCGAGTGTCAATGGAAGAGGAAAGGGCCAGACAGGAGGCAGCTGCTAAGAGAGCTGCTGAGGAGACTTCAAAGCAGGAAAAAGGAGGGGAACAGCCATCTGGCTCACAGGATACAACTATGAATGAACGTGCTAGTGCTGAATCTTCTGATGCTCAGAAGACAAATGATCCAATGGTTAGTTTGTCTTAAATTAAATAAGTTCAAATGCTGCAATAGGCAAATAGAATGTCCATTATTTCAAATATTTCCTTCCCCCATTACTTCCATTGCTCATCTTGCTTTCTATCCTACGATTTTGTCGGGGAGGGAATGTTAAATACATAAGTTTCTGCTTTGTTCTTAATCTTGGCAACATTTTTTATTGCTGTGACAACTTCAATGAAAGTAGAAGTATACACGATGTTTAGATATTCATTCTGGATCTGATAATTTTGATTACAGGAGGATGAAAATGCTCTGTTACAACAAGCCCTTGCAATGTCAATGGAAGATCCTGCCTCAAGTCAGGACCTGCGGGATACAGAAATGTCAGATGCAGCAATGGATCCAGAGTTGGCTCTTGGTAAGGTTACTTGCTCCAATTTAACCTTTCTTGGTGTGTGATGTGTTTGTTTCTTCCTTCCTTCGTCTCATGGTGCTCCTTTGCATTCAAGAATCTTATTGTGGAAGCTGGTTGGCTATTTGCGCTTGAGTAACTTAGATTTGAACTTTAAAGATATTTCATAGTCACTCCAGTTAATATAGTTCTACGAAAGCGTCAATCATAGGTTCAGAGACTGCACTGCACTAATTTTCATGAATACCTTACCTGCTAATCTTTGGTCATTTACAAGTAGTGTGCAATGGATCAGAGCAATTCTCTCCATCTAAATTTGACTTCCGTTAAAATGTAGGCCGTTTGGAACACTGCACTTGAGGTATTGAATTGAATGTGCATTCTTATCTTTTCCATCTTCGTTTGTTGCCGTTTGGTTGCAGCTCTTCAGTTGTCCGTGCAGGAGGATGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAATTACTGGCAGACCAGTCATTTGTATCGTCCATTCTTGCATCGGTATGAATTCAACCTGTAAATACTTCTCACCGATATAGAAAAACATGCCTCCAAATATCAGGTTTACGTTTAAGTGATTCAAATGGAAATGTTCTACAGCTTCCAGGGGTTGATCCAAATGATCCATCAGTTAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGCCAGAGGTTAGTTGCTTCCAGCCCTTGAAACACAAAGTATCCCGAAGATTAAAATTGTAAAATTAACTTTGAACGTTGTTTCAGGACAAGAAGAATGAAGAAAAAGGCCCCAAGGAAGACGACGACAAATGA

mRNA sequence

ATGGTGCTCGAGGCTACAATGATCTGCATCGACAATTCCGAATGGATGAGGAACGGCGATTATGCTCCTTCCAGATTCCAAGCCCAAGCCGATGCCGTTAATCTCATTTGCGGAGCTAAAACCCAGTCTAACCCGGAGAATACAGTAGGAGTTCTTACAATGGCCGGAAAAGGGGTTCGGGTTTTGGTAACTCCTACAAGTGATCTTGGCAAGATTCTAGCGTGCATGCACGGTTTAGAGATAGGTGGAGAGACAAACTTGGCTGCTGGGATTCAGGTGGCTCAGTTGGCTCTGAAGCATCGTCAAAACAAGAAGCAACAACAAAGAATTATTGTTTTTGCAGGAAGTCCTGCCAATCATGAAAAGAAGTTGTTGGAGATGATTGGAAAGAAATTAAAAAAGAACAATGTGGCACTAGATATTATTGATTTTGGTGAAGAAGATGATGGTAAGCCAGAGAAGCTGGAAGCCCTTCTTTCGGCTGTAAATAGTAACGACTCCAGTCACATTGTTCATGTTCCCTCAGGTCCAAATGCTCTTTCTGATGGAGGAAGTGGATTTGCTGCAGCTGCTGCTGCAGCTTCAGCTGGTGGGGCCGGTTTTGATTTTGGTGTGGATCCCAACTTAGACCCTGAACTAGCACTTGCACTTCGAGTGTCAATGGAAGAGGAAAGGGCCAGACAGGAGGCAGCTGCTAAGAGAGCTGCTGAGGAGACTTCAAAGCAGGAAAAAGGAGGGGAACAGCCATCTGGCTCACAGGATACAACTATGAATGAACGTGCTAGTGCTGAATCTTCTGATGCTCAGAAGACAAATGATCCAATGGAGGATGAAAATGCTCTGTTACAACAAGCCCTTGCAATGTCAATGGAAGATCCTGCCTCAAGTCAGGACCTGCGGGATACAGAAATGTCAGATGCAGCAATGGATCCAGAGTTGGCTCTTGCTCTTCAGTTGTCCGTGCAGGAGGATGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAATTACTGGCAGACCAGTCATTTGTATCGTCCATTCTTGCATCGCTTCCAGGGGTTGATCCAAATGATCCATCAGTTAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGCCAGAGGACAAGAAGAATGAAGAAAAAGGCCCCAAGGAAGACGACGACAAATGA

Coding sequence (CDS)

ATGGTGCTCGAGGCTACAATGATCTGCATCGACAATTCCGAATGGATGAGGAACGGCGATTATGCTCCTTCCAGATTCCAAGCCCAAGCCGATGCCGTTAATCTCATTTGCGGAGCTAAAACCCAGTCTAACCCGGAGAATACAGTAGGAGTTCTTACAATGGCCGGAAAAGGGGTTCGGGTTTTGGTAACTCCTACAAGTGATCTTGGCAAGATTCTAGCGTGCATGCACGGTTTAGAGATAGGTGGAGAGACAAACTTGGCTGCTGGGATTCAGGTGGCTCAGTTGGCTCTGAAGCATCGTCAAAACAAGAAGCAACAACAAAGAATTATTGTTTTTGCAGGAAGTCCTGCCAATCATGAAAAGAAGTTGTTGGAGATGATTGGAAAGAAATTAAAAAAGAACAATGTGGCACTAGATATTATTGATTTTGGTGAAGAAGATGATGGTAAGCCAGAGAAGCTGGAAGCCCTTCTTTCGGCTGTAAATAGTAACGACTCCAGTCACATTGTTCATGTTCCCTCAGGTCCAAATGCTCTTTCTGATGGAGGAAGTGGATTTGCTGCAGCTGCTGCTGCAGCTTCAGCTGGTGGGGCCGGTTTTGATTTTGGTGTGGATCCCAACTTAGACCCTGAACTAGCACTTGCACTTCGAGTGTCAATGGAAGAGGAAAGGGCCAGACAGGAGGCAGCTGCTAAGAGAGCTGCTGAGGAGACTTCAAAGCAGGAAAAAGGAGGGGAACAGCCATCTGGCTCACAGGATACAACTATGAATGAACGTGCTAGTGCTGAATCTTCTGATGCTCAGAAGACAAATGATCCAATGGAGGATGAAAATGCTCTGTTACAACAAGCCCTTGCAATGTCAATGGAAGATCCTGCCTCAAGTCAGGACCTGCGGGATACAGAAATGTCAGATGCAGCAATGGATCCAGAGTTGGCTCTTGCTCTTCAGTTGTCCGTGCAGGAGGATGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAATTACTGGCAGACCAGTCATTTGTATCGTCCATTCTTGCATCGCTTCCAGGGGTTGATCCAAATGATCCATCAGTTAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGCCAGAGGACAAGAAGAATGAAGAAAAAGGCCCCAAGGAAGACGACGACAAATGA

Protein sequence

MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHEKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALAMSMEDPASSQDLRDTEMSDAAMDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDDDK
Homology
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BLAST of Cla008905 vs. Swiss-Prot
Match: PSMD4_ARATH (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana GN=RPN10 PE=1 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 2.0e-134
Identity = 256/405 (63.21%), Postives = 316/405 (78.02%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+PSR QAQ +AVNL+CGAKTQSNPENTVG+LTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVR 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VL TPTSDLGKILACMHGL++GGE NL A IQ+AQLALKHRQNK Q+QRIIVFAGSP  +
Sbjct: 61  VLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKY 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDD-GKPEKLEALLSAVNSNDSSHIVHVPSGPNA 180
           EKK LE++GK+LKKN+V+LDI++FGE+DD  KP+KLEALL+AVN+ND SHIVHVPSG NA
Sbjct: 121 EKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANA 180

Query: 181 LSD------------GGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           LSD            G SG+ +AAAAA+A G  FDFGVDPN+DPELALALRVSMEEERAR
Sbjct: 181 LSDVLLSTPVFTGDEGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEERAR 240

Query: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA 300
           QEAAAK+AA+E  +++K G+  S SQ+T       A ++D  K  +PM++++ALL QA+A
Sbjct: 241 QEAAAKKAADEAGQKDKDGDTASASQETV------ARTTD--KNAEPMDEDSALLDQAIA 300

Query: 301 MSMEDPASSQDLRDTEMSDAA-MDPELALALQLSVQ-EDAKDSTSQPDMSKLLADQSFVS 360
           MS         + D  MS+AA  D +LALALQ+S+  E++ ++T     + LL +Q+F+S
Sbjct: 301 MS---------VGDVNMSEAADEDQDLALALQMSMSGEESSEATGAG--NNLLGNQAFIS 360

Query: 361 SILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDDDK 391
           S+L+SLPGVDPNDP+VK+LLAS+  +SK  +++       ED+ K
Sbjct: 361 SVLSSLPGVDPNDPAVKELLASLPDESKRTEEEESSSKKGEDEKK 386

[Close]
BLAST of Cla008905 vs. Swiss-Prot
Match: PSMD4_DROME (26S proteasome non-ATPase regulatory subunit 4 OS=Drosophila melanogaster GN=Rpn10 PE=1 SV=2)

HSP 1 Score: 273.9 bits (699), Expect = 2.8e-72
Identity = 171/410 (41.71%), Postives = 237/410 (57.80%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLE+TMIC DNS++ RNGDY P+R   Q D +NL+C  K +SNPEN VG++T++   V 
Sbjct: 1   MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNT-VE 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VL T TSD G+I + MH ++  GE NL  GI++A L LKHRQ K  + RI+VF GSP NH
Sbjct: 61  VLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSND--SSHIVHVPSGPN 180
           E+  L    K+LKK  V +DI+ FG+  +   E L A ++A+N  D   SH+V VP G +
Sbjct: 121 EEGDLVKQAKRLKKEKVNVDIVSFGDHGNNN-EILTAFINALNGKDGTGSHLVSVPRG-S 180

Query: 181 ALSDGGSGFAAAAAAASAGGAG-----FDFGVDPNLDPELALALRVSMEEERARQEAAAK 240
            LSD              GGAG     F+FGVDPN DPELALALRVSMEE+R RQE+  +
Sbjct: 181 VLSDALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNEDPELALALRVSMEEQRQRQESEQR 240

Query: 241 RA----AEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALAMS 300
           RA    A  T     GG   SGS     NE ++   ++A         E A+LQ+ALA+S
Sbjct: 241 RANPDGAPPTGGDAGGGGGVSGSGPG--NEESAGAENEA-------NTEEAMLQRALALS 300

Query: 301 MEDPASSQDLRDTEMSDAAMDPELALALQLSVQEDAKDSTSQ-----------------P 360
            E P  +      + ++   + ++A A+Q+S+Q+   DS +Q                  
Sbjct: 301 TETPEDNL----PDFANMTEEEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVDE 360

Query: 361 DMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEK 383
           D S+++ D +F+ S+L +LPGVDP   +V+D + S+   +K +DKK++ K
Sbjct: 361 DYSEVIGDPAFLQSVLENLPGVDPQSEAVRDAVGSL---NKDKDKKSDGK 391

[Close]
BLAST of Cla008905 vs. Swiss-Prot
Match: PSMD4_BOVIN (26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus GN=PSMD4 PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.6e-72
Identity = 159/396 (40.15%), Postives = 238/396 (60.10%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLE+TM+C+DNSE+MRNGD+ P+R QAQ DAVN++C +KT+SNPEN VG++T+A     
Sbjct: 1   MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCE 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VL T T D G+IL+ +H ++  G+     GI+VA LALKHRQ K  + RII F GSP   
Sbjct: 61  VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSND--SSHIVHVPSGP- 180
            +K L  + K+LKK  V +DII+FGEE +   EKL A ++ +N  D   SH+V VP GP 
Sbjct: 121 NEKDLVKLAKRLKKEKVNVDIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPS 180

Query: 181 --NALSDGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEAAAKRA 240
             +AL           A    G + F+FGVDP+ DPELALALRVSMEE+R RQE  A+RA
Sbjct: 181 LADALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRA 240

Query: 241 AEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALL-QQALAMSMEDPA 300
           A  ++ +   G   +G++D+  +       S  +     + D +++  ++ +A +M+   
Sbjct: 241 AAASAAE--AGIATAGTEDSD-DALLKMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSL 300

Query: 301 SSQDLRDTEMSDAAMDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPGV 360
              +    E +D  MD   A+        D  + T + D   ++ D  F+ S+L +LPGV
Sbjct: 301 QGAEFGQAESAD--MDASSAM--------DTSEPTKEEDDYDVMQDPEFLQSVLENLPGV 360

Query: 361 DPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDDDK 391
           DPN+ ++++ + S+ SQ+  + KK++++  K+++DK
Sbjct: 361 DPNNEAIRNAMGSLASQATKDGKKDKKEEDKKEEDK 381

[Close]
BLAST of Cla008905 vs. Swiss-Prot
Match: PSMD4_MOUSE (26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus GN=Psmd4 PE=1 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.1e-71
Identity = 162/393 (41.22%), Postives = 231/393 (58.78%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLE+TM+C+DNSE+MRNGD+ P+R QAQ DAVN++C +KT+SNPEN VG++T+A     
Sbjct: 1   MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCE 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VL T T D G+IL+ +H ++  G+     GI+VA LALKHRQ K  + RII F GSP   
Sbjct: 61  VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSND--SSHIVHVPSGP- 180
            +K L  + K+LKK  V +DII+FGEE +   EKL A ++ +N  D   SH+V VP GP 
Sbjct: 121 NEKDLVKLAKRLKKEKVNVDIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPS 180

Query: 181 --NALSDGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEAAAKRA 240
             +AL           A    G + F+FGVDP+ DPELALALRVSMEE+R RQE  A+RA
Sbjct: 181 LADALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRA 240

Query: 241 AEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALAMSMEDP-- 300
           A  ++ +   G    G++D        ++ +  + T +  E     L    +M+ E+   
Sbjct: 241 AAASAAE--AGIATPGTED--------SDDALLKMTINQQEFGRPGLPDLSSMTEEEQIA 300

Query: 301 -ASSQDLRDTEMSDAAMDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLP 360
            A    L+ TE S  + D + + A+      D  D   + D   ++ D  F+ S+L +LP
Sbjct: 301 YAMQMSLQGTEFSQESADMDASSAM------DTSDPVKEEDDYDVMQDPEFLQSVLENLP 360

Query: 361 GVDPNDPSVKDLLASMQSQSKPE---DKKNEEK 383
           GVDPN+ +++ ++ ++ SQ+  +   DKK EEK
Sbjct: 361 GVDPNNAAIRSVMGALASQATKDGKNDKKEEEK 375

[Close]
BLAST of Cla008905 vs. Swiss-Prot
Match: PSMD4_DICDI (26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum GN=psmD4 PE=2 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 4.0e-71
Identity = 165/383 (43.08%), Postives = 235/383 (61.36%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           M LEAT++C+DNSEWMRNGD+ PSR +AQ DAVNLIC +KTQSNPE+ V +++MAGK   
Sbjct: 1   MTLEATIVCLDNSEWMRNGDFTPSRSEAQKDAVNLICASKTQSNPESAVSIMSMAGKKPE 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VLVT T +L KIL+    L+I G+ + +  +Q+AQLAL+HRQN  Q  RII F GSP   
Sbjct: 61  VLVTLTQELSKILSGAQELKINGKIDFSTTMQIAQLALRHRQNNHQHPRIIAFVGSPLKE 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
            K+ L  + K+LKKN VA+DII+FGE  +   +KLEA ++ VN+ND SH++ VP GP+ L
Sbjct: 121 TKEELIQLAKRLKKNGVAVDIINFGEVTENS-DKLEAFINDVNNNDESHLLTVPPGPHIL 180

Query: 181 SDGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEAAAKRAAEETS 240
           SD      +    + +G  G +F ++ + DP+LA+AL++S+EEE+ RQE   ++A EE +
Sbjct: 181 SD--IILQSPIVESGSGQFGSEF-INADTDPDLAMALKLSLEEEKQRQE-RERKAREEAN 240

Query: 241 KQEKGGEQPSGSQDTTMNERASAESS-DAQKTNDPMEDENALLQQALAMSMEDPASSQDL 300
               GG   SG+  TT    A  ES+ D    +DP       L +ALA+SM       ++
Sbjct: 241 ----GGSTNSGTTTTT----APTESNMDVNFEDDPE------LAEALALSM--ATDKMEV 300

Query: 301 RDTEMSDAAMDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPGVDPNDP 360
           + +  +  +  P+         Q+   D TS    S+   DQ F++S L SLPGVDPN  
Sbjct: 301 QSSTTNTDSQPPQ-------QQQQPPTDDTS----SEAFKDQDFLNSTLNSLPGVDPN-- 349

Query: 361 SVKDLLASMQSQSKPEDKKNEEK 383
            +K+ L ++  + + +DK NE+K
Sbjct: 361 RIKNALENLSKKDEDKDKDNEKK 349

[Close]
BLAST of Cla008905 vs. TrEMBL
Match: A0A0A0L1M0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002730 PE=4 SV=1)

HSP 1 Score: 726.5 bits (1874), Expect = 1.7e-206
Identity = 380/403 (94.29%), Postives = 385/403 (95.53%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGPNAL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SD-------------GGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SD             GGSGFAAAAAAASAGG GFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGGGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA 300
           QEAAAKRAA+ETSKQEKGGEQPSGSQDTTMNERASAESSDAQKT+DPMEDENALLQQALA
Sbjct: 241 QEAAAKRAADETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTSDPMEDENALLQQALA 300

Query: 301 MSMEDPASSQDLRDTEMSDAAMDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSI 360
           MSMEDPASS D+RDTEMSDAAMDPELALALQLSVQE++KDSTSQPDMSKLLADQSFVSSI
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAMDPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSSI 360

Query: 361 LASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDDDK 391
           LASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEE  PKEDDDK
Sbjct: 361 LASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDK 402

[Close]
BLAST of Cla008905 vs. TrEMBL
Match: A0A0A0KGP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507050 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 1.2e-178
Identity = 334/404 (82.67%), Postives = 362/404 (89.60%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQADA+NLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAINLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VLVTPT+DLGKILACMHGLEIGGE NLAAGIQVAQLALKHRQNKKQQQRIIVF GSP  H
Sbjct: 61  VLVTPTTDLGKILACMHGLEIGGEINLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPVKH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIG+KLKKNNVALDI+DFGEEDDGKPEKLE+LL+AVNSND+SHIVHVP+GPN L
Sbjct: 121 EKKLLEMIGRKLKKNNVALDIVDFGEEDDGKPEKLESLLAAVNSNDTSHIVHVPAGPNVL 180

Query: 181 SD-------------GGSGFAAAAAAASAGG-AGFDFGVDPNLDPELALALRVSMEEERA 240
           SD             GGSGFAAAAAAA+AGG +GFDFGVDPNLDPELALALRVSMEEERA
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFDFGVDPNLDPELALALRVSMEEERA 240

Query: 241 RQEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQ-KTNDPMEDENALLQQA 300
           RQEAAAK+AAEE +KQEKG EQPSGSQD TM ER+   +SDA+ K  D M+DENALLQQA
Sbjct: 241 RQEAAAKKAAEENTKQEKGAEQPSGSQDATMTERSGLATSDAENKAADLMDDENALLQQA 300

Query: 301 LAMSMEDPASSQDLRDTEMSDAAM-DPELALALQLSVQEDAKDSTSQPDMSKLLADQSFV 360
           LAMSM++P+ + D+RD +MS+AA  DPELALALQLSVQE + DS+SQ DMSKLLADQSFV
Sbjct: 301 LAMSMDNPSGTSDIRDIDMSEAASDDPELALALQLSVQEGSSDSSSQTDMSKLLADQSFV 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDD 389
           SSILASLPGVDPNDPSVKDLLASMQSQ+  EDKK+EEK  KED+
Sbjct: 361 SSILASLPGVDPNDPSVKDLLASMQSQA--EDKKDEEKSSKEDE 402

[Close]
BLAST of Cla008905 vs. TrEMBL
Match: W9T0R3_9ROSA (26S proteasome non-ATPase regulatory subunit 4 OS=Morus notabilis GN=L484_026664 PE=4 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 1.7e-177
Identity = 331/404 (81.93%), Postives = 359/404 (88.86%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+PSRFQAQ+DAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VLVTPTSDLGKILACMHGLEIGGE NLAAGIQVAQLALKHRQNKKQQQRIIVF GSP  H
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIG+KLKKN+VALDI++FGEEDDGK EKLEALL+AVN+ND+SHIVHVP GPN L
Sbjct: 121 EKKLLEMIGRKLKKNSVALDIVNFGEEDDGKTEKLEALLAAVNNNDTSHIVHVPPGPNVL 180

Query: 181 SD-------------GGSGFAAAAAAASAGGA-GFDFGVDPNLDPELALALRVSMEEERA 240
           SD             G SGF AA+AAA+AGGA GFDFGVDPNLDPELALALRVSMEEERA
Sbjct: 181 SDVLISTPIFTGDGEGASGFVAASAAAAAGGASGFDFGVDPNLDPELALALRVSMEEERA 240

Query: 241 RQEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDA-QKTNDPMEDENALLQQA 300
           RQEAAAK+AAEE +KQEKGGEQPS SQD TM ERA+  +S A  K  D M+DENALLQQA
Sbjct: 241 RQEAAAKKAAEEAAKQEKGGEQPSSSQDATMTERATTPASGADNKATDLMDDENALLQQA 300

Query: 301 LAMSMEDPASSQDLRDTEMSD-AAMDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFV 360
           LAMSM+DPASS D+RDT+MS+ AA+DPELALALQLS Q+  KDS++  DMSKLLADQSFV
Sbjct: 301 LAMSMDDPASSHDVRDTDMSEAAAVDPELALALQLSAQDSTKDSSNPADMSKLLADQSFV 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDD 389
           SSILASLPGVDPNDPSVKDLLASMQSQS+ + KKNE+K PKE+D
Sbjct: 361 SSILASLPGVDPNDPSVKDLLASMQSQSETDKKKNEDKEPKEED 404

[Close]
BLAST of Cla008905 vs. TrEMBL
Match: D7SNX7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03620 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 1.9e-176
Identity = 325/403 (80.65%), Postives = 360/403 (89.33%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+P+RFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPTRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VLVTPTSDLGKILACMHGLE+GGE NLAAGIQVAQLALKHRQNKKQQQRIIVFAGSP  +
Sbjct: 61  VLVTPTSDLGKILACMHGLEVGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKY 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           +KK+LEMIG+KLKKN+VA+DI+DFGE+DDGKPEKLEALL +VN+NDSSHIVHVP+GPNAL
Sbjct: 121 DKKVLEMIGRKLKKNSVAIDIVDFGEDDDGKPEKLEALLGSVNNNDSSHIVHVPAGPNAL 180

Query: 181 SD-------------GGSGFAAAAAAASAGG-AGFDFGVDPNLDPELALALRVSMEEERA 240
           SD             GGSGFAAAAAAA+AGG AGFDFGVDPNLDPELALALRVSMEEERA
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVAGFDFGVDPNLDPELALALRVSMEEERA 240

Query: 241 RQEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQAL 300
           RQEAAAK+AAEE S+QEK GEQ S SQD TM E A+  +SDA K +D M+DENALLQQAL
Sbjct: 241 RQEAAAKKAAEEASRQEKEGEQQSSSQDATMTEHANVAASDADKKSDLMDDENALLQQAL 300

Query: 301 AMSMEDPASSQDLRDTEMSDAAM-DPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVS 360
           AMSM+DPA+S  +RDT+MS+AA  D +LALALQLSVQ+  KDSTSQ DMSKLL DQ+FVS
Sbjct: 301 AMSMDDPATSLAMRDTDMSEAAADDQDLALALQLSVQDTGKDSTSQTDMSKLLTDQTFVS 360

Query: 361 SILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDD 389
           SILASLPGVDPNDPSVKDLLASMQ++S+ + KKNE+K P E+D
Sbjct: 361 SILASLPGVDPNDPSVKDLLASMQNESESQQKKNEDKAPDEED 403

[Close]
BLAST of Cla008905 vs. TrEMBL
Match: M5W204_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005827mg PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 7.9e-175
Identity = 327/404 (80.94%), Postives = 359/404 (88.86%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 38  MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 97

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VLVTPTSDLGKILACMHGLEIGGE NLAAGIQVAQLALKHRQNKKQQQRIIVFAGS   H
Sbjct: 98  VLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSTVKH 157

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           +KK LE+IG++LKKN+VALDI++FGEED+ K EKLE+L   VN+ND+SHIVHVP GP+AL
Sbjct: 158 DKKFLEIIGRRLKKNSVALDIVNFGEEDEEKSEKLESLFKTVNNNDTSHIVHVPPGPSAL 217

Query: 181 SD-------------GGSGFAAAAAAASAGG-AGFDFGVDPNLDPELALALRVSMEEERA 240
           SD             GGSGFAAAAAAA+AGG +GFDFGVDPNLDPELALALRVSMEEERA
Sbjct: 218 SDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFDFGVDPNLDPELALALRVSMEEERA 277

Query: 241 RQEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDA-QKTNDPMEDENALLQQA 300
           RQEAAAK+AAE+ SKQEKGGE  S SQD TM ERASA +S+A  K+ND M+DENALLQQA
Sbjct: 278 RQEAAAKKAAEDASKQEKGGEAQSSSQDATMTERASAGTSEADNKSNDFMDDENALLQQA 337

Query: 301 LAMSMEDPASSQDLRDTEMSDA-AMDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFV 360
           LAMSM++PASS ++RD +MS+A   DPELALALQLSVQE AKDS SQ DMSKLLADQSFV
Sbjct: 338 LAMSMDEPASSHEMRDADMSEATGEDPELALALQLSVQESAKDSGSQKDMSKLLADQSFV 397

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDD 389
           SSILASLPGVDPNDPSVKDLLASMQ+QS+P+ KKNE+K PKE++
Sbjct: 398 SSILASLPGVDPNDPSVKDLLASMQNQSEPDQKKNEDKAPKEEE 441

[Close]
BLAST of Cla008905 vs. NCBI nr
Match: gi|659095348|ref|XP_008448534.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis melo])

HSP 1 Score: 726.9 bits (1875), Expect = 1.9e-206
Identity = 381/401 (95.01%), Postives = 384/401 (95.76%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGPNAL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SD-------------GGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SD             GGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA 300
           QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA
Sbjct: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA 300

Query: 301 MSMEDPASSQDLRDTEMSDAAMDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSI 360
           MSMEDPASS D+RDTEMSDAAMDPELALALQLSVQE++KDSTSQPDMSKLLADQSFVSSI
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAMDPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSSI 360

Query: 361 LASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDD 389
           LASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEE  PKEDD
Sbjct: 361 LASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDD 400

[Close]
BLAST of Cla008905 vs. NCBI nr
Match: gi|449456821|ref|XP_004146147.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis sativus])

HSP 1 Score: 726.5 bits (1874), Expect = 2.5e-206
Identity = 380/403 (94.29%), Postives = 385/403 (95.53%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGPNAL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SD-------------GGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SD             GGSGFAAAAAAASAGG GFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGGGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA 300
           QEAAAKRAA+ETSKQEKGGEQPSGSQDTTMNERASAESSDAQKT+DPMEDENALLQQALA
Sbjct: 241 QEAAAKRAADETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTSDPMEDENALLQQALA 300

Query: 301 MSMEDPASSQDLRDTEMSDAAMDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSI 360
           MSMEDPASS D+RDTEMSDAAMDPELALALQLSVQE++KDSTSQPDMSKLLADQSFVSSI
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAMDPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSSI 360

Query: 361 LASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDDDK 391
           LASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEE  PKEDDDK
Sbjct: 361 LASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDK 402

[Close]
BLAST of Cla008905 vs. NCBI nr
Match: gi|449434144|ref|XP_004134856.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis sativus])

HSP 1 Score: 634.0 bits (1634), Expect = 1.7e-178
Identity = 334/404 (82.67%), Postives = 362/404 (89.60%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQADA+NLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAINLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VLVTPT+DLGKILACMHGLEIGGE NLAAGIQVAQLALKHRQNKKQQQRIIVF GSP  H
Sbjct: 61  VLVTPTTDLGKILACMHGLEIGGEINLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPVKH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIG+KLKKNNVALDI+DFGEEDDGKPEKLE+LL+AVNSND+SHIVHVP+GPN L
Sbjct: 121 EKKLLEMIGRKLKKNNVALDIVDFGEEDDGKPEKLESLLAAVNSNDTSHIVHVPAGPNVL 180

Query: 181 SD-------------GGSGFAAAAAAASAGG-AGFDFGVDPNLDPELALALRVSMEEERA 240
           SD             GGSGFAAAAAAA+AGG +GFDFGVDPNLDPELALALRVSMEEERA
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFDFGVDPNLDPELALALRVSMEEERA 240

Query: 241 RQEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQ-KTNDPMEDENALLQQA 300
           RQEAAAK+AAEE +KQEKG EQPSGSQD TM ER+   +SDA+ K  D M+DENALLQQA
Sbjct: 241 RQEAAAKKAAEENTKQEKGAEQPSGSQDATMTERSGLATSDAENKAADLMDDENALLQQA 300

Query: 301 LAMSMEDPASSQDLRDTEMSDAAM-DPELALALQLSVQEDAKDSTSQPDMSKLLADQSFV 360
           LAMSM++P+ + D+RD +MS+AA  DPELALALQLSVQE + DS+SQ DMSKLLADQSFV
Sbjct: 301 LAMSMDNPSGTSDIRDIDMSEAASDDPELALALQLSVQEGSSDSSSQTDMSKLLADQSFV 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDD 389
           SSILASLPGVDPNDPSVKDLLASMQSQ+  EDKK+EEK  KED+
Sbjct: 361 SSILASLPGVDPNDPSVKDLLASMQSQA--EDKKDEEKSSKEDE 402

[Close]
BLAST of Cla008905 vs. NCBI nr
Match: gi|659080520|ref|XP_008440835.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis melo])

HSP 1 Score: 633.3 bits (1632), Expect = 2.9e-178
Identity = 334/404 (82.67%), Postives = 361/404 (89.36%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQADA+NLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAINLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VLVTPT+DLGKILACMHGLEIGGE NLAAGIQVAQLALKHRQNKKQQQRIIVF GSP  H
Sbjct: 61  VLVTPTTDLGKILACMHGLEIGGEINLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPVKH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIG+KLKKNNVALDI+DFGEEDDGKPEKLE+LL+AVNSND+SHIVHVP+GPN L
Sbjct: 121 EKKLLEMIGRKLKKNNVALDIVDFGEEDDGKPEKLESLLAAVNSNDTSHIVHVPAGPNVL 180

Query: 181 SD-------------GGSGFAAAAAAASAGG-AGFDFGVDPNLDPELALALRVSMEEERA 240
           SD             GGSGFAAAAAAA+AGG +GFDFGVDPNLDPELALALRVSMEEERA
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFDFGVDPNLDPELALALRVSMEEERA 240

Query: 241 RQEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQ-KTNDPMEDENALLQQA 300
           RQEAAAK+AAEE +KQEKG EQPSGSQD TM ER    +SDA+ K  D M+DENALLQQA
Sbjct: 241 RQEAAAKKAAEENTKQEKGAEQPSGSQDATMTERPGLATSDAENKAADLMDDENALLQQA 300

Query: 301 LAMSMEDPASSQDLRDTEMSDAAM-DPELALALQLSVQEDAKDSTSQPDMSKLLADQSFV 360
           LAMSM++P+ + D+RD +MS+AA  DPELALALQLSVQE + DS+SQ DMSKLLADQSFV
Sbjct: 301 LAMSMDNPSGTSDIRDIDMSEAASDDPELALALQLSVQEGSSDSSSQTDMSKLLADQSFV 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDD 389
           SSILASLPGVDPNDPSVKDLLASMQSQ+  EDKK+EEK  KED+
Sbjct: 361 SSILASLPGVDPNDPSVKDLLASMQSQA--EDKKDEEKSSKEDE 402

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BLAST of Cla008905 vs. NCBI nr
Match: gi|703163410|ref|XP_010113333.1| (26S proteasome non-ATPase regulatory subunit 4 [Morus notabilis])

HSP 1 Score: 630.2 bits (1624), Expect = 2.4e-177
Identity = 331/404 (81.93%), Postives = 359/404 (88.86%), Query Frame = 1 

Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+PSRFQAQ+DAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120
           VLVTPTSDLGKILACMHGLEIGGE NLAAGIQVAQLALKHRQNKKQQQRIIVF GSP  H
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIG+KLKKN+VALDI++FGEEDDGK EKLEALL+AVN+ND+SHIVHVP GPN L
Sbjct: 121 EKKLLEMIGRKLKKNSVALDIVNFGEEDDGKTEKLEALLAAVNNNDTSHIVHVPPGPNVL 180

Query: 181 SD-------------GGSGFAAAAAAASAGGA-GFDFGVDPNLDPELALALRVSMEEERA 240
           SD             G SGF AA+AAA+AGGA GFDFGVDPNLDPELALALRVSMEEERA
Sbjct: 181 SDVLISTPIFTGDGEGASGFVAASAAAAAGGASGFDFGVDPNLDPELALALRVSMEEERA 240

Query: 241 RQEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDA-QKTNDPMEDENALLQQA 300
           RQEAAAK+AAEE +KQEKGGEQPS SQD TM ERA+  +S A  K  D M+DENALLQQA
Sbjct: 241 RQEAAAKKAAEEAAKQEKGGEQPSSSQDATMTERATTPASGADNKATDLMDDENALLQQA 300

Query: 301 LAMSMEDPASSQDLRDTEMSD-AAMDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFV 360
           LAMSM+DPASS D+RDT+MS+ AA+DPELALALQLS Q+  KDS++  DMSKLLADQSFV
Sbjct: 301 LAMSMDDPASSHDVRDTDMSEAAAVDPELALALQLSAQDSTKDSSNPADMSKLLADQSFV 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEEKGPKEDD 389
           SSILASLPGVDPNDPSVKDLLASMQSQS+ + KKNE+K PKE+D
Sbjct: 361 SSILASLPGVDPNDPSVKDLLASMQSQSETDKKKNEDKEPKEED 404

The following BLAST results are available for this feature:
BLAST of Cla008905 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSMD4_ARATH2.0e-13463.2126S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana G... [more]
PSMD4_DROME2.8e-7241.7126S proteasome non-ATPase regulatory subunit 4 OS=Drosophila melanogaster GN=Rpn... [more]
PSMD4_BOVIN3.6e-7240.1526S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus GN=PSMD4 PE=2 SV=1[more]
PSMD4_MOUSE3.1e-7141.2226S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus GN=Psmd4 PE=1 SV=... [more]
PSMD4_DICDI4.0e-7143.0826S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum GN=ps... [more]
BLAST of Cla008905 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1M0_CUCSA1.7e-20694.29Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002730 PE=4 SV=1[more]
A0A0A0KGP9_CUCSA1.2e-17882.67Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507050 PE=4 SV=1[more]
W9T0R3_9ROSA1.7e-17781.9326S proteasome non-ATPase regulatory subunit 4 OS=Morus notabilis GN=L484_026664... [more]
D7SNX7_VITVI1.9e-17680.65Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03620 PE=4 SV=... [more]
M5W204_PRUPE7.9e-17580.94Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005827mg PE=4 SV=1[more]
BLAST of Cla008905 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659095348|ref|XP_008448534.1|1.9e-20695.01PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis melo][more]
gi|449456821|ref|XP_004146147.1|2.5e-20694.29PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis sativ... [more]
gi|449434144|ref|XP_004134856.1|1.7e-17882.67PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis sativ... [more]
gi|659080520|ref|XP_008440835.1|2.9e-17882.67PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis melo][more]
gi|703163410|ref|XP_010113333.1|2.4e-17781.9326S proteasome non-ATPase regulatory subunit 4 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR003903UIM_dom
IPR027040Proteasome subunit Rpn10
Vocabulary: Cellular Component
TermDefinition
GO:0008540proteasome regulatory particle, base subcomplex
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0043248 proteasome assembly
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0008540 proteasome regulatory particle, base subcomplex
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0000502 proteasome complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0031593 polyubiquitin binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU21765watermelon EST collection version 2.0transcribed_cluster
WMU36079watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU44496watermelon EST collection version 2.0transcribed_cluster
WMU46804watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla008905Cla008905.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU36079WMU36079transcribed_cluster
WMU46804WMU46804transcribed_cluster
WMU44496WMU44496transcribed_cluster
WMU21765WMU21765transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type AGENE3DG3DSA:3.40.50.410coord: 7..175
score: 8.3
IPR002035von Willebrand factor, type APFAMPF13519VWA_2coord: 6..115
score: 1.0
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 2..175
score: 7.7
IPR002035von Willebrand factor, type APROFILEPS50234VWFAcoord: 5..191
score: 11
IPR002035von Willebrand factor, type AunknownSSF53300vWA-likecoord: 4..171
score: 6.23
IPR003903Ubiquitin interacting motifPFAMPF02809UIMcoord: 210..223
score: 0.51coord: 277..292
score: 0.0098coord: 310..323
score:
IPR003903Ubiquitin interacting motifSMARTSM00726uimcoord: 208..227
score: 11.0coord: 277..296
score: 0.46coord: 308..327
score:
IPR003903Ubiquitin interacting motifPROFILEPS50330UIMcoord: 277..296
score: 9.745coord: 208..227
score: 8
IPR027040Proteasome subunit Rpn10PANTHERPTHR1022326S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4coord: 1..389
score: 1.3E
NoneNo IPR availableunknownCoilCoilcoord: 218..238
scor
NoneNo IPR availablePANTHERPTHR10223:SF026S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4coord: 1..389
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla008905Cla97C10G185220Watermelon (97103) v2wmwmbB056
Cla008905Cla97C01G019840Watermelon (97103) v2wmwmbB049
Cla008905Csa3G002730Cucumber (Chinese Long) v2cuwmB200
Cla008905Csa6G507050Cucumber (Chinese Long) v2cuwmB450
Cla008905MELO3C013760Melon (DHL92) v3.5.1mewmB446
Cla008905MELO3C007918Melon (DHL92) v3.5.1mewmB555
Cla008905ClCG10G000640Watermelon (Charleston Gray)wcgwmB056
Cla008905ClCG01G020390Watermelon (Charleston Gray)wcgwmB118
Cla008905CSPI03G00680Wild cucumber (PI 183967)cpiwmB200
Cla008905CSPI06G31910Wild cucumber (PI 183967)cpiwmB465
Cla008905Cucsa.043710Cucumber (Gy14) v1cgywmB018
Cla008905Cucsa.322690Cucumber (Gy14) v1cgywmB583
Cla008905CmaCh03G006770Cucurbita maxima (Rimu)cmawmB616
Cla008905CmaCh07G004170Cucurbita maxima (Rimu)cmawmB813
Cla008905CmaCh06G001180Cucurbita maxima (Rimu)cmawmB782
Cla008905CmoCh06G001100Cucurbita moschata (Rifu)cmowmB775
Cla008905CmoCh03G007010Cucurbita moschata (Rifu)cmowmB608
Cla008905CmoCh16G012880Cucurbita moschata (Rifu)cmowmB285
Cla008905CmoCh07G004150Cucurbita moschata (Rifu)cmowmB805
Cla008905Lsi07G010960Bottle gourd (USVL1VR-Ls)lsiwmB429
Cla008905Lsi01G005890Bottle gourd (USVL1VR-Ls)lsiwmB129
Cla008905Cp4.1LG10g00330Cucurbita pepo (Zucchini)cpewmB063
Cla008905Cp4.1LG14g10320Cucurbita pepo (Zucchini)cpewmB202
Cla008905Cp4.1LG19g08740Cucurbita pepo (Zucchini)cpewmB472
Cla008905Cp4.1LG08g13090Cucurbita pepo (Zucchini)cpewmB833
Cla008905CsGy3G000640Cucumber (Gy14) v2cgybwmB188
Cla008905MELO3C007918.2Melon (DHL92) v3.6.1medwmB541
Cla008905MELO3C013760.2Melon (DHL92) v3.6.1medwmB438
Cla008905Carg01211Silver-seed gourdcarwmB0149
Cla008905Carg19470Silver-seed gourdcarwmB0425
Cla008905Carg00583Silver-seed gourdcarwmB0398
Cla008905Carg07947Silver-seed gourdcarwmB0639
Cla008905CsaV3_3G000720Cucumber (Chinese Long) v3cucwmB209
Cla008905CsaV3_6G047270Cucumber (Chinese Long) v3cucwmB475
Cla008905Bhi03G000627Wax gourdwgowmB413
Cla008905BhiUN179G43Wax gourdwgowmB575
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla008905Cla014296Watermelon (97103) v1wmwmB048
The following block(s) are covering this gene:
GeneOrganismBlock
Cla008905Cucumber (Chinese Long) v3cucwmB120
Cla008905Cucurbita maxima (Rimu)cmawmB292
Cla008905Cucurbita pepo (Zucchini)cpewmB540
Cla008905Cucumber (Gy14) v2cgybwmB422