CmoCh06G000780 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAATGGCATAAGATTCAAGAAATGGGATTAAAGGAAAGAATACCTGCAACGGTAACTTTGCGATTAATTTTGAGCCACGAACACAAGGCCCCTTTCTTGAGACGCATTGCTTCGGAATTAGATTAGGGCAATGATCCATATGTTACCTTGTCGGATTTGTAATGAAGACGCTGCTTCTGAATTTCCACTCGTTTCGTTCTGTAGCTTCATCCAGGCGTTTGCTCGAAGATCAAATCTTCTCGAACAGTAGCTGTTCCAATTAAGCAACCTTCGCAGAACTAGGTAAAACATTAGGCGCCTTCGATCAGCCGCTTCCACAAGATATTTTCCTACCATTTTGTTTTAGACATTAAAAAAAAAAAATGGAAATTCAAATTTCTCCTTCTATTTTAATCATTTACTTTTAAATATCTAGTTAATATAAATTTTGGTGATTTTGATTTCAACTTCATCCACAAATTGAGGAGTAAAATTTGATTTATCTTTCTCGAAATTTAATTGTAGGCGCAACAAAAGCGGGGAAGCGGCGATAGGTCATTAAAGTTCGAATCTTTGGATAAAGTAAGCAAATATTCGCGGCTCCCAAATCCGCCCGCTGTTTTTGTTTTCTTCATCTTATCCTTCTTATTTTCATCTTTAACGCCGTCTTCTTTCCTTCAAACCTTCCGCCCTTCCATTTATGGTTTTGTTCTATGAATCACACCCCTTTCCCCTTGTTTTCCTTCTTCTTTTCTTTGATTAATCCAGCTTCGATTCTGTTTTTTCGCGATCTGGGTTTCTAAGTTCATTCGATTCCAATTACTCCTTCAGATCTAATCGGGGGTTTATATTTTTCAGATCCAAATCGCTTGATGAGGGACTGTTTTGATATTCTTCTTTGAATTGTTTTCATGGATCTTAGTAGCTTATCCGATTGATTGATTTGTGAATTGAAACTAGATAGGTCTCTGGGTATTCGTGGTGTGCTGTTAATTATTGGGGTTTTCTTACGATGGTCACTGTTAATCTTGGAATGCTTCATTATGTGTTGGACCATGTGTATGGTGCATTTGTGCACAGAACCAAAATCAGCCCACCGTTTTTCTCGAGGGGATGGGGTGGTTCGAAGCTGGATTTGCTTGAAAAGATGATCAAACAGTTGTTCCCAGATATGGTAGGCCAGAATTTGCCTCCCAGTTTGATTAGACCCATTTGGAGAACGGTTTGGGAGAATGAGAGTGCTCGTTTGAGAGAAGGGGTTTTCAAGACCCCTTGTGATGAGCAGCTTCTTGCTGCATTGCCTCCCGAGAGTCATAATGCAAGGGTTGCTTTTCTCATGCCTAAATCTGTGCCAACCCACAAGATGTCTTGTGTTGTTCATTTGGCAGGTATCATGTTTTGTAATGCTTTACATAATATCAATCTTGTTTTTAGTGAATACTTATCTTGTTTACTGCTCAGGTATATTGTCCTCTTTGCGCTTTTCCTTTGGTTTCCACACCCTTGTAAAGAATGTTTTGTTCCCCTCTCTAACTGATGTGGGATCTCACAGTTTGCTACTCACAGAACATGATCTCATAGTTAGTAGATAATTCTAGGTGAGAAAGTTTTTGACACATTATGGTTCTCTTTGATTAAGAGACCAACTTGAGCATAGCTAACTGGTTATATGTCCTAGAAAAGGTCGAAGGTTCAAATCTTCACCTCTCAAACTTAAAATTAGAATTATAGTTTCTTTGGAATCTCTCTTTTTCTTTGTTCTTCTGATCATGTATATATGTTCGTTGTTCAATGAGTATCAATCTCATTGACTGAATGAAGTGCTTCTCTATTGTAAAGGTCAGATGATAACCCTACACAAACAATTATTTTGCAGGGACTGGAGACCATACATTTGAAAGACGACTACGTCTTGGAGGGCCATTGTTGAAGGAAAATATTGCAACCATGGTGCTTGAGAGGTATGCTTTATCCTGCTCTGTTAAATGAAACTAAAGTCACTAATAATGTTATGCAATACTTTAAGTCATTAATTTCGTGTCACATATTCGACTACAGTCCTTTCTATGGTCAGCGACGACCCATGCTGCAATCTGGTGCCAAACTCTTGTGTGTTAGTGACTTGCTTTTGTTGGGAAGAGCAACCATTGAAGAGGCTCGCAGCCTTTTACATTGGTTAGACTCTGAGGCAGGGTTTGGAAAGATGGGTATTTGTGGGCTTAGCATGGGTATGCCTCAATCTAGATACCTTGTGATCATGAAACTAGTACATACTAAATTGCATGGACTAAATCATTACATATTAAAGTTTTGGCATTAAATCCTTACTTTGAGAGCCTAGTTTAAATTTTAAATCTGGCATATGTTTGCATTTAAGCAGTCATTTCAGAAACAAATTCCTAAGTTGGACCCATTTATGAAATTTAGGAGGAGTACATGCTGCAATGGTTGGATCTCTACACCCTACACCGATTGCGACGTTTCCTTTTCTTTCTCCACACTCTGCTGTTGTGGCATTCTGTGAGGGAATTTTAAAGCATGGAACTGCTTGGGAAGCATTAAGACAGGATCTTGCATTGCAGAAGTCTGCCATGACTCTTGAGGAGGTTAGAGAACGGATGCGGAATGTACTCTCTCTTACAGATGTCACTCGCTTTCCGATCCCGAAAAATCCCAATGCTGTCATACTTGTTGCAGCTACTGTAAGTTCTTGATCCTGCTGTACTACATCCAATACATTTCTCAAGTGTTCTGCTTTCCTTGCATCTCTAAATGTGCTGATATGGAGTCTTATGCCATTCATATATATCGAGTTCGGTTACTCCTGCTTAGTTCATAATATGTGATCTTGTTGCTTGTATTTGCTGTAAGTTTTCTTTTGTAGGCTTGGTTCTTGACTTATTATGGAATATTTAGTTTGGAAACTATTAGAGAGGCCTTGAATTTGCTTCATTTCAACACTTACCATGTGGGGTTTAGTGACTAATTCTTGTAGTATTTGTTTGTCATTGATGGTTAACAATTGGAGCACTCTCTTGTAAGCTTTTGTGGCCTGCCCTCTGTTTTATTATTCTTCTGAAAGCTTAATTTTGATTGAACTCTGAGAGATGTATTCGTGTTGCTTTACGACACGGTTTGTTGCTATTTTGTTCTCTACTTTTCGCGTTGAAGCTTAGTTCAAACACTTTCGAGTTTCAGGACGATGGCTACATTCCGAAACACTCTGTGCTCGAGCTCCAGAAAGCTTGGCCTGGTTCAGAAGTAAGATGGGTGACTGGTGGTCATGTGTCTTCCTTCATTCTACACAATAACGAGTTTCGTCGGGCGATTGTTGATGGGCTCGACAGACTCGAATGGAAAGAATCGCCATTGTGACATGAAAGCTTTGCACCAAACATGTAAAGATGGCTGCCTATTTCTTTCTTTCTTGTTTTCTTCTTATTCTGTGGATTTGTATCATTCAACCTGTAAATCTGATATGATACTATTCTGCGATGTCCGCTCTTTTCCTAATTTCACGTTCATAGGTATAAACATTAGACAACTCTATTCAGAAGCAATGCCTGCATCTTTCGTTGTAATTTATTTAACAATGGTGTGATCGCACTCGAATCAGACCCAACTCGTGGTTTATTTGACACGGTGAAGCTCGTATCAATTTTTCTTGTAAGAGCATGAGTGTTATATAAGCACGCTA CAAAAATGGCATAAGATTCAAGAAATGGGATTAAAGGAAAGAATACCTGCAACGGTAACTTTGCGATTAATTTTGAGCCACGAACACAAGGCCCCTTTCTTGAGACGCATTGCTTCGGAATTAGATTAGGGCAATGATCCATATGTTACCTTGTCGGATTTGTAATGAAGACGCTGCTTCTGAATTTCCACTCGTTTCGTTCTGTAGCTTCATCCAGGCGTTTGCTCGAAGATCAAATCTTCTCGAACAGTAGCTGTTCCAATTAAGCAACCTTCGCAGAACTAGGCGCAACAAAAGCGGGGAAGCGGCGATAGGTCATTAAAGTTCGAATCTTTGGATAAAGTAAGCAAATATTCGCGGCTCCCAAATCCGCCCGCTGTTTTTGTTTTCTTCATCTTATCCTTCTTATTTTCATCTTTAACGCCGTCTTCTTTCCTTCAAACCTTCCGCCCTTCCATTTATGGTTTTGTTCTATGAATCACACCCCTTTCCCCTTGTTTTCCTTCTTCTTTTCTTTGATTAATCCAGCTTCGATTCTGTTTTTTCGCGATCTGGGTTTCTAAGTTCATTCGATTCCAATTACTCCTTCAGATCTAATCGGGGGTTTATATTTTTCAGATCCAAATCGCTTGATGAGGGACTGTTTTGATATTCTTCTTTGAATTGTTTTCATGGATCTTAGTAGCTTATCCGATTGATTGATTTGTGAATTGAAACTAGATAGGTCTCTGGGTATTCGTGGTGTGCTGTTAATTATTGGGGTTTTCTTACGATGGTCACTGTTAATCTTGGAATGCTTCATTATGTGTTGGACCATGTGTATGGTGCATTTGTGCACAGAACCAAAATCAGCCCACCGTTTTTCTCGAGGGGATGGGGTGGTTCGAAGCTGGATTTGCTTGAAAAGATGATCAAACAGTTGTTCCCAGATATGGTAGGCCAGAATTTGCCTCCCAGTTTGATTAGACCCATTTGGAGAACGGTTTGGGAGAATGAGAGTGCTCGTTTGAGAGAAGGGGTTTTCAAGACCCCTTGTGATGAGCAGCTTCTTGCTGCATTGCCTCCCGAGAGTCATAATGCAAGGGTTGCTTTTCTCATGCCTAAATCTGTGCCAACCCACAAGATGTCTTGTGTTGTTCATTTGGCAGGGACTGGAGACCATACATTTGAAAGACGACTACGTCTTGGAGGGCCATTGTTGAAGGAAAATATTGCAACCATGGTGCTTGAGAGTCCTTTCTATGGTCAGCGACGACCCATGCTGCAATCTGGTGCCAAACTCTTGTGTGTTAGTGACTTGCTTTTGTTGGGAAGAGCAACCATTGAAGAGGCTCGCAGCCTTTTACATTGGTTAGACTCTGAGGCAGGGTTTGGAAAGATGGGTATTTGTGGGCTTAGCATGGGAGGAGTACATGCTGCAATGGTTGGATCTCTACACCCTACACCGATTGCGACGTTTCCTTTTCTTTCTCCACACTCTGCTGTTGTGGCATTCTGTGAGGGAATTTTAAAGCATGGAACTGCTTGGGAAGCATTAAGACAGGATCTTGCATTGCAGAAGTCTGCCATGACTCTTGAGGAGGTTAGAGAACGGATGCGGAATGTACTCTCTCTTACAGATGTCACTCGCTTTCCGATCCCGAAAAATCCCAATGCTGTCATACTTGTTGCAGCTACTGACGATGGCTACATTCCGAAACACTCTGTGCTCGAGCTCCAGAAAGCTTGGCCTGGTTCAGAAGTAAGATGGGTGACTGGTGGTCATGTGTCTTCCTTCATTCTACACAATAACGAGTTTCGTCGGGCGATTGTTGATGGGCTCGACAGACTCGAATGGAAAGAATCGCCATTGTGACATGAAAGCTTTGCACCAAACATGTAAAGATGGCTGCCTATTTCTTTCTTTCTTGTTTTCTTCTTATTCTGTGGATTTGTATCATTCAACCTGTAAATCTGATATGATACTATTCTGCGATGTCCGCTCTTTTCCTAATTTCACGTTCATAGGTATAAACATTAGACAACTCTATTCAGAAGCAATGCCTGCATCTTTCGTTGTAATTTATTTAACAATGGTGTGATCGCACTCGAATCAGACCCAACTCGTGGTTTATTTGACACGGTGAAGCTCGTATCAATTTTTCTTGTAAGAGCATGAGTGTTATATAAGCACGCTA ATGGTCACTGTTAATCTTGGAATGCTTCATTATGTGTTGGACCATGTGTATGGTGCATTTGTGCACAGAACCAAAATCAGCCCACCGTTTTTCTCGAGGGGATGGGGTGGTTCGAAGCTGGATTTGCTTGAAAAGATGATCAAACAGTTGTTCCCAGATATGGTAGGCCAGAATTTGCCTCCCAGTTTGATTAGACCCATTTGGAGAACGGTTTGGGAGAATGAGAGTGCTCGTTTGAGAGAAGGGGTTTTCAAGACCCCTTGTGATGAGCAGCTTCTTGCTGCATTGCCTCCCGAGAGTCATAATGCAAGGGTTGCTTTTCTCATGCCTAAATCTGTGCCAACCCACAAGATGTCTTGTGTTGTTCATTTGGCAGGGACTGGAGACCATACATTTGAAAGACGACTACGTCTTGGAGGGCCATTGTTGAAGGAAAATATTGCAACCATGGTGCTTGAGAGTCCTTTCTATGGTCAGCGACGACCCATGCTGCAATCTGGTGCCAAACTCTTGTGTGTTAGTGACTTGCTTTTGTTGGGAAGAGCAACCATTGAAGAGGCTCGCAGCCTTTTACATTGGTTAGACTCTGAGGCAGGGTTTGGAAAGATGGGTATTTGTGGGCTTAGCATGGGAGGAGTACATGCTGCAATGGTTGGATCTCTACACCCTACACCGATTGCGACGTTTCCTTTTCTTTCTCCACACTCTGCTGTTGTGGCATTCTGTGAGGGAATTTTAAAGCATGGAACTGCTTGGGAAGCATTAAGACAGGATCTTGCATTGCAGAAGTCTGCCATGACTCTTGAGGAGGTTAGAGAACGGATGCGGAATGTACTCTCTCTTACAGATGTCACTCGCTTTCCGATCCCGAAAAATCCCAATGCTGTCATACTTGTTGCAGCTACTGACGATGGCTACATTCCGAAACACTCTGTGCTCGAGCTCCAGAAAGCTTGGCCTGGTTCAGAAGTAAGATGGGTGACTGGTGGTCATGTGTCTTCCTTCATTCTACACAATAACGAGTTTCGTCGGGCGATTGTTGATGGGCTCGACAGACTCGAATGGAAAGAATCGCCATTGTGA
BLAST of CmoCh06G000780 vs. Swiss-Prot
Match: ABD18_MOUSE (Protein ABHD18 OS=Mus musculus GN=Abhd18 PE=2 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.9e-30 Identity = 86/249 (34.54%), Postives = 133/249 (53.41%), Query Frame = 1
BLAST of CmoCh06G000780 vs. Swiss-Prot
Match: ABD18_RAT (Protein ABHD18 OS=Rattus norvegicus GN=Abhd18 PE=2 SV=2) HSP 1 Score: 128.6 bits (322), Expect = 1.3e-28 Identity = 84/249 (33.73%), Postives = 131/249 (52.61%), Query Frame = 1
BLAST of CmoCh06G000780 vs. Swiss-Prot
Match: ABD18_HUMAN (Protein ABHD18 OS=Homo sapiens GN=ABHD18 PE=2 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 4.3e-27 Identity = 92/302 (30.46%), Postives = 154/302 (50.99%), Query Frame = 1
BLAST of CmoCh06G000780 vs. TrEMBL
Match: A0A0A0LEI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G810490 PE=4 SV=1) HSP 1 Score: 707.2 bits (1824), Expect = 1.0e-200 Identity = 338/360 (93.89%), Postives = 351/360 (97.50%), Query Frame = 1
BLAST of CmoCh06G000780 vs. TrEMBL
Match: A0A0D2MEP1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G228500 PE=4 SV=1) HSP 1 Score: 678.7 bits (1750), Expect = 3.9e-192 Identity = 319/360 (88.61%), Postives = 346/360 (96.11%), Query Frame = 1
BLAST of CmoCh06G000780 vs. TrEMBL
Match: A0A0B0MW17_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_27047 PE=4 SV=1) HSP 1 Score: 678.3 bits (1749), Expect = 5.0e-192 Identity = 319/360 (88.61%), Postives = 346/360 (96.11%), Query Frame = 1
BLAST of CmoCh06G000780 vs. TrEMBL
Match: M5VPX0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007644mg PE=4 SV=1) HSP 1 Score: 675.2 bits (1741), Expect = 4.3e-191 Identity = 317/360 (88.06%), Postives = 347/360 (96.39%), Query Frame = 1
BLAST of CmoCh06G000780 vs. TrEMBL
Match: A0A061EWG7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024853 PE=4 SV=1) HSP 1 Score: 674.5 bits (1739), Expect = 7.3e-191 Identity = 319/360 (88.61%), Postives = 344/360 (95.56%), Query Frame = 1
BLAST of CmoCh06G000780 vs. TAIR10
Match: AT3G12150.1 (AT3G12150.1 unknown protein) HSP 1 Score: 634.0 bits (1634), Expect = 5.5e-182 Identity = 294/359 (81.89%), Postives = 335/359 (93.31%), Query Frame = 1
BLAST of CmoCh06G000780 vs. NCBI nr
Match: gi|659084804|ref|XP_008443082.1| (PREDICTED: uncharacterized protein C4orf29 homolog [Cucumis melo]) HSP 1 Score: 711.8 bits (1836), Expect = 5.9e-202 Identity = 341/360 (94.72%), Postives = 354/360 (98.33%), Query Frame = 1
BLAST of CmoCh06G000780 vs. NCBI nr
Match: gi|449437601|ref|XP_004136580.1| (PREDICTED: uncharacterized protein C4orf29 homolog [Cucumis sativus]) HSP 1 Score: 707.2 bits (1824), Expect = 1.5e-200 Identity = 338/360 (93.89%), Postives = 351/360 (97.50%), Query Frame = 1
BLAST of CmoCh06G000780 vs. NCBI nr
Match: gi|502109053|ref|XP_004493555.1| (PREDICTED: uncharacterized protein C4orf29 homolog [Cicer arietinum]) HSP 1 Score: 681.0 bits (1756), Expect = 1.1e-192 Identity = 322/360 (89.44%), Postives = 345/360 (95.83%), Query Frame = 1
BLAST of CmoCh06G000780 vs. NCBI nr
Match: gi|645271551|ref|XP_008240966.1| (PREDICTED: uncharacterized protein C4orf29 [Prunus mume]) HSP 1 Score: 679.9 bits (1753), Expect = 2.5e-192 Identity = 320/360 (88.89%), Postives = 346/360 (96.11%), Query Frame = 1
BLAST of CmoCh06G000780 vs. NCBI nr
Match: gi|823136510|ref|XP_012468017.1| (PREDICTED: uncharacterized protein C4orf29 [Gossypium raimondii]) HSP 1 Score: 678.7 bits (1750), Expect = 5.5e-192 Identity = 319/360 (88.61%), Postives = 346/360 (96.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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