Carg01237 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAATTTTGAGCCACGAACACACGGCCCCTTTTTTGAGACGCATTGCTTCGGAATTAGATTAGGGCAATGATCCATATGTTACCTTGTCGGATTTGTAATGAACACGCTGCTTCTGAATTTCCACTCGTTTCGTTCTGTAGCTTCATCCAGGCGTTTGCTCGAAGATCAAATCTTCTCGAACAGTAGCTGTTCCAATTAGGCAACCTTCGCAGAACTAGGTAAAACATTAGGCGCCTTCGATCAGCCGCTTCCACAAGATATTTTCCTTCCATTTTGTTTTAGACATTAAAAAAAAAATGGAAATTCAAATTTCTCCTTCTATTTTAATCATTTACTTTTAAATATCTAGTTAATATAAATTTTGGTGATTTTGATTTCAACTTCATCAACAAATTGAGGAGTAAAATTTGATTTATTTTTCTCGAAATTTAATTGTAGGCGCAACAAAAGCGGGGAAGCGGCGATAGGTCATTAAAGTTCGAAGCTTTGGATAAAGTAAGCAAATATTCGCGGCTCCCAAATCCGCCCGCTGTTTTTGTTTTCTTCATCTTATCCTTCTTATTTTCATCTTTAACGCCGTCTTCTTTCCTTCAAACCTTCCGCCCTTCCATTTATGGTTTTGTTCTATGAATCACACCCCTTTCCCCTTGTTTTCCTTCTTCTTTTCTTTGATTAATCCAGCTTCGATTCTGTTTTTTCGCGATCTGGGTTTCTAAGTTCATTCGATTCCAATTACTCCTTCAGATCTAATCGGGGGTTTATATTTTTCAGATCCAAATCGCTTGATGAGGGACTGTTTTGATATTCTTCTTTGAATTGTTTTCATGGATCTTAGGTAGCTTATCCGATTGATTGATCTGTGAATTGAAACTAGATAGGTCTCTGGGTATTCGTGGTGTGCTGTTAATTATTGGGGTTTTCTTACGATGGTCACTGTTAATCTTGGAATGCTTCATTATGTGTTGGACCATGTGTATGGTGCATTTGTGCACAGAACCAAAATCAGCCCACCGTTTTTCTCGAGGGGATGGGGTGGTTCGAAGCTGGATTTGCTTGAAAAGATGATCAAACAGTTGTTCCCAGATATGGTAGGCCAGAATTTGCCTCCCAGTTTGATTAGACCCATTTGGAGAACGGTTTGGGAGAATGAGAGTGCTCGTTTGAGAGAAGGGGTTTTCAAGACCCCTTGTGATGAGCAGCTTCTTGCTGCATTGCCTCCCGAGAGTCATAATGCAAGGGTTGCTTTTCTCATGCCTAAATCTGTGCCAACCCATAAGATGTCTTGTGTTGTTCATTTGGCAGGTATCATGTTTTGTAATGCTTTACATAATATCAATCTTGTTTTTAGTGAATACTTATCTTGTTTACTGCTTATGTATATTGTCCTCTTTGCGCTTTTCCTTTGGTTTTCACACCCTTATAAACAATGTTTTTCCACACCCTTATAAAGAATGTTTTGTTCCCCTCTCCAACTGATGTGGGATCTCACCGTTTGCTACTCACAGAACATGATCTCATATTTAATAGATAATTCTAGGTGAGAGTTTTTGACACATTATGGTTCTCTTTGATTAAGAGACCAACTTGAGCATAGCTAACTGGTTATATGTCCTAGAAAATGTCGAAGGTTCAAATCTCCACCTCTCAAACTTAAAATTAGAATTATAGTTTCTTTGGAATCTCTCTTTTTCTTTGTTCTTCTGATCATGTATATATGTTCGTTGTTCAATGAGTATCAATCTCATTGACTGAATGAAGTGCTTCTCTATTGTAAAGGTCAGATGATAACCCTACACAAACAATTATTTTGCAGGGACTGGAGACCATACATTTGAAAGACGACTACGTCTTGGAGGGCCATTGTTGAAGGAAAATATTGCAACCATGGTGCTTGAGAGGTATGCTTTATCCTGCTCTGTTAAATGAAACTAAAGTCACTAATAATGTTATGCAATACTTTAAGTCATTAATTTCGTGTCACATATTCGACTACAGTCCTTTCTATGGTCAGCGACGACCCATGCTGCAATCTGGTGCCAAACTCTTGTGTGTTAGTGACTTGCTTTTGTTGGGAAGAGCAACCATTGAAGAGGCTCGCAGCCTTTTACATTGGTTAGACTCTGAGGCAGGGTTTGGAAAGATGGGTATTTGTGGGCTTAGCATGGGTATGCCTCAATCTAGATACCTTGTGATCATGAAACTAGTACATACTAAATTGCATGGACTAAATCATTACATGTTCAAGTTTTGGCATTAAATCCTTACTTTGAGAGCCTAGTTTAAATTTTAAATCTGGCATATGTTTGCATTTAAGCAGTCATTTCAGAAACAAATTCCTAAGTTGGACCCATTTATGAAATTTAGGAGGAGTACACGCTGCAATGGTTGGATCTCTACACCCTACACCGATTGCGACGTTTCCTTTTCTTTCTCCACACTCTGCTGTTGTGGCATTCTGTGAGGGAATTTTAAAGCATGGAACTGCTTGGGAAGCATTAAGACAGGATCTTGCATTGCAGAAGTCTGCCATGACTCTTGAGGAGGTTAGAGAACGGATGCGGAATGTACTCTCTCTTACAGATGTCACTCGCTTTCCGATCCCGAAAAATCCCAATGCTGTCATACTTGTTGCAGCTACTGTAAGTTCTTGATCCTGCTGTACTACATCCAATACATTTCTCAAGTGTTCTGCTTTCCTTGCATCTCTAAATGTGCTGATATGGAGTCTTATGCCATTCATATATATCGAGTTCGGTTACTCCTGCTTAGTTCATAATATGTGATCTTGTTGCTTGTATTTGCTGTGTAAGTTTTCTTTTGTAGGCTTGGTTCTTGACTTATTATGGAATATTTAGTTTGGAAACTATTAGAGAGGCCTTGAATTTGCTTCATTTCAACACTTACCATGTGGGGTTTAGTGACTAATTCTTGTAGTATTTGTTTGTCATTGATGGTTAACAATTGGAGCACTCTCTTGTAAGCTTTTGTGGCCTGCCCTCTGTTTTATTATTCTTCTGAAAGCTTAATTTTGATTGAACTCTGAGAGATGTATTCGTGTTGCTTTACGACACGGTTTGTTGCTATTTTGTTCTCTACTTTTCGCGTTGAAGCTTAGTTCAAACACTTTCGAGTTTCAGGACGATGGCTACATTCCGAAACACTCTGTGCTCGAGCTCCAGAAAGCTTGGCCTGGTTCAGAAGTAAGATGGGTGACTGGTGGTCATGTGTCTTCCTTCATTCTACACAATAACGAGTTTCGTCGGGCAATTGTTGATGGGCTCGACAGACTCGAATGGAAAGAATCGCCATTGTGACATGAAGCATTGCACCAAACATGTAAAGATGGTTGCCTATTTCTTTCTTTCTTTCTTGTTCTCTTCTTATTCTGTGGATTTGTATCATTCAACCTGTAAATCTGATATGATACTATTCTGCGATGTCTGCTCTTTTCCTAATTTCACGTTCATAGGTATAAACATTAGACAACTCTATTCAGAAGCAATGCCTGCATCTTTCGTTGTAATTTATATAACAAACGGTGTGATCGCACTCGAATCAGACCCAACTCGTGGTTTATTTGACACGTTGAACTTTGCTCATATTGTTTGTCAATTCTCAATTTTTCTCGTAATAGAGTGAGTGTTATATAAGCACTTTTTCCTTTCCGGCTTCTCAATTGGGAAGTCTGGAGGGAAAAGTCCAAAGAAGATAAGATTTGCTAGCAGTATACTTGAACCACTACTAATGGTATCAGAACCAAACATCGGACAATGTGCCAGTGAGGAAGCAGAGCCCCGAAGGGAGTGGACATGAGGCAATGTACCAGCAAGAACGCTGGGCCCTGTAGAGGTGGATTGGGGGAGAGTCCCACATCGATTGAAGAAGGGAATGAGTGCTAATGAAGACGTTGGG ATTAATTTTGAGCCACGAACACACGGCCCCTTTTTTGAGACGCATTGCTTCGGAATTAGATTAGGGCAATGATCCATATGTTACCTTGTCGGATTTGTAATGAACACGCTGCTTCTGAATTTCCACTCGTTTCGTTCTGTAGCTTCATCCAGGCGTTTGCTCGAAGATCAAATCTTCTCGAACAGTAGCTGTTCCAATTAGGCAACCTTCGCAGAACTAGGCGCAACAAAAGCGGGGAAGCGGCGATAGGTCATTAAAGTTCGAAGCTTTGGATAAAGTCTCTGGGTATTCGTGGTGTGCTGTTAATTATTGGGGTTTTCTTACGATGGTCACTGTTAATCTTGGAATGCTTCATTATGTGTTGGACCATGTGTATGGTGCATTTGTGCACAGAACCAAAATCAGCCCACCGTTTTTCTCGAGGGGATGGGGTGGTTCGAAGCTGGATTTGCTTGAAAAGATGATCAAACAGTTGTTCCCAGATATGGTAGGCCAGAATTTGCCTCCCAGTTTGATTAGACCCATTTGGAGAACGGTTTGGGAGAATGAGAGTGCTCGTTTGAGAGAAGGGGTTTTCAAGACCCCTTGTGATGAGCAGCTTCTTGCTGCATTGCCTCCCGAGAGGACTGGAGACCATACATTTGAAAGACGACTACGTCTTGGAGGGCCATTGTTGAAGGAAAATATTGCAACCATGGTGCTTGAGAGTCCTTTCTATGGTCAGCGACGACCCATGCTGCAATCTGGTGCCAAACTCTTGTGTGTTAGTGACTTGCTTTTGTTGGGAAGAGCAACCATTGAAGAGGCTCGCAGCCTTTTACATTGGTTAGACTCTGAGGCAGGGTTTGGAAAGATGGGTATTTGTGGGCTTAGCATGGGAGGAGTACACGCTGCAATGGTTGGATCTCTACACCCTACACCGATTGCGACGTTTCCTTTTCTTTCTCCACACTCTGCTGTTGTGGCATTCTGTGAGGGAATTTTAAAGCATGGAACTGCTTGGGAAGCATTAAGACAGGATCTTGCATTGCAGAAGTCTGCCATGACTCTTGAGGAGGTTAGAGAACGGATGCGGAATGTACTCTCTCTTACAGATGTCACTCGCTTTCCGATCCCGAAAAATCCCAATGCTGTCATACTTGTTGCAGCTACTGACGATGGCTACATTCCGAAACACTCTGTGCTCGAGCTCCAGAAAGCTTGGCCTGGTTCAGAAGTAAGATGGGTGACTGGTGGTCATGTGTCTTCCTTCATTCTACACAATAACGAGTTTCGTCGGGCAATTGTTGATGGGCTCGACAGACTCGAATGGAAAGAATCGCCATTGTGACATGAAGCATTGCACCAAACATGTAAAGATGGTTGCCTATTTCTTTCTTTCTTTCTTGTTCTCTTCTTATTCTGTGGATTTGTATCATTCAACCTGTAAATCTGATATGATACTATTCTGCGATGTCTGCTCTTTTCCTAATTTCACGTTCATAGGTATAAACATTAGACAACTCTATTCAGAAGCAATGCCTGCATCTTTCGTTGTAATTTATATAACAAACGGTGTGATCGCACTCGAATCAGACCCAACTCGTGGTTTATTTGACACGTTGAACTTTGCTCATATTGTTTGTCAATTCTCAATTTTTCTCGTAATAGAGTGAGTGTTATATAAGCACTTTTTCCTTTCCGGCTTCTCAATTGGGAAGTCTGGAGGGAAAAGTCCAAAGAAGATAAGATTTGCTAGCAGTATACTTGAACCACTACTAATGGTATCAGAACCAAACATCGGACAATGTGCCAGTGAGGAAGCAGAGCCCCGAAGGGAGTGGACATGAGGCAATGTACCAGCAAGAACGCTGGGCCCTGTAGAGGTGGATTGGGGGAGAGTCCCACATCGATTGAAGAAGGGAATGAGTGCTAATGAAGACGTTGGG ATGGTCACTGTTAATCTTGGAATGCTTCATTATGTGTTGGACCATGTGTATGGTGCATTTGTGCACAGAACCAAAATCAGCCCACCGTTTTTCTCGAGGGGATGGGGTGGTTCGAAGCTGGATTTGCTTGAAAAGATGATCAAACAGTTGTTCCCAGATATGGTAGGCCAGAATTTGCCTCCCAGTTTGATTAGACCCATTTGGAGAACGGTTTGGGAGAATGAGAGTGCTCGTTTGAGAGAAGGGGTTTTCAAGACCCCTTGTGATGAGCAGCTTCTTGCTGCATTGCCTCCCGAGAGGACTGGAGACCATACATTTGAAAGACGACTACGTCTTGGAGGGCCATTGTTGAAGGAAAATATTGCAACCATGGTGCTTGAGAGTCCTTTCTATGGTCAGCGACGACCCATGCTGCAATCTGGTGCCAAACTCTTGTGTGTTAGTGACTTGCTTTTGTTGGGAAGAGCAACCATTGAAGAGGCTCGCAGCCTTTTACATTGGTTAGACTCTGAGGCAGGGTTTGGAAAGATGGGTATTTGTGGGCTTAGCATGGGAGGAGTACACGCTGCAATGGTTGGATCTCTACACCCTACACCGATTGCGACGTTTCCTTTTCTTTCTCCACACTCTGCTGTTGTGGCATTCTGTGAGGGAATTTTAAAGCATGGAACTGCTTGGGAAGCATTAAGACAGGATCTTGCATTGCAGAAGTCTGCCATGACTCTTGAGGAGGTTAGAGAACGGATGCGGAATGTACTCTCTCTTACAGATGTCACTCGCTTTCCGATCCCGAAAAATCCCAATGCTGTCATACTTGTTGCAGCTACTGACGATGGCTACATTCCGAAACACTCTGTGCTCGAGCTCCAGAAAGCTTGGCCTGGTTCAGAAGTAAGATGGGTGACTGGTGGTCATGTGTCTTCCTTCATTCTACACAATAACGAGTTTCGTCGGGCAATTGTTGATGGGCTCGACAGACTCGAATGGAAAGAATCGCCATTGTGA MVTVNLGMLHYVLDHVYGAFVHRTKISPPFFSRGWGGSKLDLLEKMIKQLFPDMVGQNLPPSLIRPIWRTVWENESARLREGVFKTPCDEQLLAALPPERTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPMLQSGAKLLCVSDLLLLGRATIEEARSLLHWLDSEAGFGKMGICGLSMGGVHAAMVGSLHPTPIATFPFLSPHSAVVAFCEGILKHGTAWEALRQDLALQKSAMTLEEVRERMRNVLSLTDVTRFPIPKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNNEFRRAIVDGLDRLEWKESPL
BLAST of Carg01237 vs. NCBI nr
Match: XP_022931884.1 (protein ABHD18 [Cucurbita moschata] >XP_022971218.1 protein ABHD18 [Cucurbita maxima]) HSP 1 Score: 671.8 bits (1732), Expect = 1.2e-189 Identity = 333/360 (92.50%), Postives = 333/360 (92.50%), Query Frame = 0
BLAST of Carg01237 vs. NCBI nr
Match: XP_023538802.1 (protein ABHD18 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 670.2 bits (1728), Expect = 3.6e-189 Identity = 332/360 (92.22%), Postives = 332/360 (92.22%), Query Frame = 0
BLAST of Carg01237 vs. NCBI nr
Match: XP_022154285.1 (protein ABHD18 [Momordica charantia]) HSP 1 Score: 647.1 bits (1668), Expect = 3.2e-182 Identity = 318/360 (88.33%), Postives = 327/360 (90.83%), Query Frame = 0
BLAST of Carg01237 vs. NCBI nr
Match: XP_008443082.1 (PREDICTED: protein ABHD18 [Cucumis melo]) HSP 1 Score: 641.3 bits (1653), Expect = 1.8e-180 Identity = 314/360 (87.22%), Postives = 327/360 (90.83%), Query Frame = 0
BLAST of Carg01237 vs. NCBI nr
Match: XP_004136580.1 (PREDICTED: uncharacterized protein C4orf29 homolog [Cucumis sativus] >KGN59324.1 hypothetical protein Csa_3G810490 [Cucumis sativus]) HSP 1 Score: 636.7 bits (1641), Expect = 4.4e-179 Identity = 311/360 (86.39%), Postives = 324/360 (90.00%), Query Frame = 0
BLAST of Carg01237 vs. TAIR10
Match: AT3G12150.1 (unknown protein) HSP 1 Score: 580.1 bits (1494), Expect = 8.8e-166 Identity = 275/359 (76.60%), Postives = 312/359 (86.91%), Query Frame = 0
BLAST of Carg01237 vs. Swiss-Prot
Match: sp|Q0P651|ABD18_HUMAN (Protein ABHD18 OS=Homo sapiens OX=9606 GN=ABHD18 PE=2 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 4.1e-27 Identity = 88/300 (29.33%), Postives = 136/300 (45.33%), Query Frame = 0
BLAST of Carg01237 vs. Swiss-Prot
Match: sp|Q8C1A9|ABD18_MOUSE (Protein ABHD18 OS=Mus musculus OX=10090 GN=Abhd18 PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.2e-26 Identity = 93/343 (27.11%), Postives = 141/343 (41.11%), Query Frame = 0
BLAST of Carg01237 vs. Swiss-Prot
Match: sp|Q4V7A8|ABD18_RAT (Protein ABHD18 OS=Rattus norvegicus OX=10116 GN=Abhd18 PE=2 SV=2) HSP 1 Score: 115.9 bits (289), Expect = 8.4e-25 Identity = 91/343 (26.53%), Postives = 139/343 (40.52%), Query Frame = 0
BLAST of Carg01237 vs. Swiss-Prot
Match: sp|P9WL66|Y2627_MYCTO (Uncharacterized protein MT2702 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2702 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.7e-04 Identity = 59/220 (26.82%), Postives = 89/220 (40.45%), Query Frame = 0
BLAST of Carg01237 vs. Swiss-Prot
Match: sp|P9WL67|Y2627_MYCTU (Uncharacterized protein Rv2627c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2627c PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.7e-04 Identity = 59/220 (26.82%), Postives = 89/220 (40.45%), Query Frame = 0
BLAST of Carg01237 vs. TrEMBL
Match: tr|A0A1S3B7Y7|A0A1S3B7Y7_CUCME (protein ABHD18 OS=Cucumis melo OX=3656 GN=LOC103486787 PE=4 SV=1) HSP 1 Score: 641.3 bits (1653), Expect = 1.2e-180 Identity = 314/360 (87.22%), Postives = 327/360 (90.83%), Query Frame = 0
BLAST of Carg01237 vs. TrEMBL
Match: tr|A0A0A0LEI2|A0A0A0LEI2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G810490 PE=4 SV=1) HSP 1 Score: 636.7 bits (1641), Expect = 2.9e-179 Identity = 311/360 (86.39%), Postives = 324/360 (90.00%), Query Frame = 0
BLAST of Carg01237 vs. TrEMBL
Match: tr|A0A2C9V8W7|A0A2C9V8W7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G031300 PE=4 SV=1) HSP 1 Score: 622.5 bits (1604), Expect = 5.6e-175 Identity = 298/360 (82.78%), Postives = 323/360 (89.72%), Query Frame = 0
BLAST of Carg01237 vs. TrEMBL
Match: tr|A0A0D2MEP1|A0A0D2MEP1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G228500 PE=4 SV=1) HSP 1 Score: 617.8 bits (1592), Expect = 1.4e-173 Identity = 297/360 (82.50%), Postives = 322/360 (89.44%), Query Frame = 0
BLAST of Carg01237 vs. TrEMBL
Match: tr|A0A0B0MW17|A0A0B0MW17_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_27047 PE=4 SV=1) HSP 1 Score: 617.5 bits (1591), Expect = 1.8e-173 Identity = 297/360 (82.50%), Postives = 322/360 (89.44%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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