CmoCh06G000520 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTAAAAAGAAATAGAAAAAGGAGTAAAAAGCGAAACCCACCGCCATTTCTCTCTCCGGCGCGATACAATTTAGCTACGAATACAAGGATTAGAACATCCCAAGATCTCCCCCGATCGCATCCACATTCCTTCCGTTTCATTCCCGCCGTGCCCTCCCGGTGAAGAAGACAATCAAACACGACATCCATCTCCTGCTTTGATCCACAGGTTCATCCTCGTTTGGGTTCTTCGCTGCTATTCTATTTTAACTCTTTACGCATACCGAACAAACATCTTCGATTTAGGAACTCCAAAACCTAATGGTGTTTCTTAATGTTACTTAATGTTATCTTACTATGAAGTTTTTGTGGCGTTTTTGGGCGTTTCTCATTCCAATGCTCGTTTTTCATGTTGAGCCCTTGAAAAATTTTAGCTCCATTTTTCTTTCCGTATATGGTTTACATCCTGGTTTTAGTTGAGGATTCATCGGATCAGATGAAGTGTGCAAAAGGAATTAGTAGATCGAAGTGTAAAAATCATGTGTAAGTGAGGGGAGGGTAAAATGTAGGTTTTATGAATTGCATTTTTGATGATTCTTAATGAAGCTTACAGGTTGGATTCGTTTGAAAGAGATTGGGAGGGATTTTGTTGTGCATCAGAGCTAGATGGATGGCGGAATAAGTTATGTCCCTCCTGCATATGTTCCTCTAGGGCAGTCTGATTCAGAAGCGGAGATTATTTCCAGAGATGAGGGCAGCCATTCCACACCTAATGAACTTAAGGATGGATTGTCACAATGGTCGTCTGGAATATGTGCGTGCTGCGATGATATGCAGAGCTGTACGCTACTTCCTGCCTTCTGACCTTGATTTATGCGAAGGAAAAGTTATGAAGGTGCATCTTGAGTATAGAAAGGAAATGTATCATTACTTTGCATGTGTTCTTATATCAAATTGATAAATATTTGAATTGTAGGCCAATGGCTGTTTCGATTAGGGAACCCATCATATCCTGTTGTGAAAGCTTGCTCTGCCATTTATTTGTTGAGTTTTCTAGATCCAAGGAAGCGCTGAATTTTTCACTATGATTAGGTTTATTATAGGAAACCTGATCAGCCCTAAATGATGGGCATAGAGCGTGAAGAACTTTGATTAGTTCTCTAACATGTTCATGTTGTAGTATCAATTAGAGTCCCCAGTTTCAATCATCGAAGTGTGTATAAAGATTCGGACAGTTGATCTTTTGCGCCTTTAATTTTTTAGATACCAAACAGAATTTAGATAACATGATGATTTTATACGAATCTCTTTTTATATTTTTGGTGGTGGTTGAATATTACTATCAAGTCAAAGAGCATTGCATTTAAAATGATCTCGCATGTTAAATGGGAAGCTCATTGCAACTTTTCTTGGCGCAGGTTTTATTGGCCTTGTTTGTCCATGCTTTCTGTTTGGGAAGAATGCTGAACTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATACAGTCTGCTGCCTGTTGACTGATGGACTTTTCTTGAATCTACCTGGATGCGTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTACGGTCTAAGTACAATTTGCCGGTATTATATCGTACTCTTATTACTTTTTCATTGTTCATTGTCTTGGAAGCATGAATTATTTACAGATTATATATGGCACATAGCATTTATAAACGATGTTATGCATTAATCTTTTCTCCTGATGGCCAAGAGAATTCGAAGTTTTAAGTGGCTTTTTTCTTTACATTTGTCTCTGACACAAGACTGGGAGTTAGTTCTAATGTAACGACCCGACTTTTCGTACATATAGCGATCAGAGCCGTTATAAATGGTATCAAAGCCAAACACCAAGCAGTGTGCTAGCGAGGACGCTGGATCCCCAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTGTAAGGGTGTGGAAACCTCTCTCTAACAAATGCGTTCTAAAATCTTGAGGAGAAGCCCTTGAAGGGAAAGCCCAGAGGACAATATCTGCCTGCGGTGAGTTTGGAAGGTTACAAAAGCATTCCTTTTAAGGTGTGAAAACCTAAAGACATTTTAAATCTTTGAGGGGAAGCCCTTGAAGGAAAAGCCTAAAAGACCTATGGGTAGGTTTGGGTTGTTACATCTAATGCCTTTATCCTCCATGGAATATAGCCCAGCTCACTACAAGTTCTCTAGTCAATGAATTGAGTTGCGGATTGCTATGCTTCCATGAGCCACACCTAATAATCTCCGAAATGTGATGCAGGAAGCACCTTGTGGAGACTTTGTGACCCACTTTTTCTGCCATTTCTGCGCTATCTGTCAAGAATACAGAGAGATTCGTGAAAGAGCTAGAGGATCCGGTCCCCATGATTTGAGTTTGGCTGTTGTTACCCCGCCAACAACTCAAACAATGGATTCTAACCCAGAAAAATAGTTCCTTAATTGCTGGAGCTACCGAGAAATACCGGTAACTTGTTAGATTTGCTCGCTTAGCACCCAGTTCTTTCTTTCCCTCTTTTGTTCTTACTGGACTTTTCAGAGTTTCTTCTTTCCCTCTTTTTTTATTATGAGATTTCCCCCCCTTCTTTCGTCTATTTAACATTGTAGTATTATTAGAAATTCAGTCCTACTAGTGATTGATAAAATTATGTTTTAAACATGAGTTATAATGATTGGTAAATTGATATTAAATA TGTTAAAAAGAAATAGAAAAAGGAGTAAAAAGCGAAACCCACCGCCATTTCTCTCTCCGGCGCGATACAATTTAGCTACGAATACAAGGATTAGAACATCCCAAGATCTCCCCCGATCGCATCCACATTCCTTCCGTTTCATTCCCGCCGTGCCCTCCCGGTGAAGAAGACAATCAAACACGACATCCATCTCCTGCTTTGATCCACAGGTTGGATTCGTTTGAAAGAGATTGGGAGGGATTTTGTTGTGCATCAGAGCTAGATGGATGGCGGAATAAGTTATGTCCCTCCTGCATATGTTCCTCTAGGGCAGTCTGATTCAGAAGCGGAGATTATTTCCAGAGATGAGGGCAGCCATTCCACACCTAATGAACTTAAGGATGGATTGTCACAATGGTCGTCTGGAATATGTGCGTGCTGCGATGATATGCAGAGCTGTTTTATTGGCCTTGTTTGTCCATGCTTTCTGTTTGGGAAGAATGCTGAACTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATACAGTCTGCTGCCTGTTGACTGATGGACTTTTCTTGAATCTACCTGGATGCGTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTACGGTCTAAGTACAATTTGCCGGAAGCACCTTGTGGAGACTTTGTGACCCACTTTTTCTGCCATTTCTGCGCTATCTGTCAAGAATACAGAGAGATTCGTGAAAGAGCTAGAGGATCCGGTCCCCATGATTTGAGTTTGGCTGTTGTTACCCCGCCAACAACTCAAACAATGGATTCTAACCCAGAAAAATAGTTCCTTAATTGCTGGAGCTACCGAGAAATACCGGTAACTTGTTAGATTTGCTCGCTTAGCACCCAGTTCTTTCTTTCCCTCTTTTGTTCTTACTGGACTTTTCAGAGTTTCTTCTTTCCCTCTTTTTTTATTATGAGATTTCCCCCCCTTCTTTCGTCTATTTAACATTGTAGTATTATTAGAAATTCAGTCCTACTAGTGATTGATAAAATTATGTTTTAAACATGAGTTATAATGATTGGTAAATTGATATTAAATA ATGGATGGCGGAATAAGTTATGTCCCTCCTGCATATGTTCCTCTAGGGCAGTCTGATTCAGAAGCGGAGATTATTTCCAGAGATGAGGGCAGCCATTCCACACCTAATGAACTTAAGGATGGATTGTCACAATGGTCGTCTGGAATATGTGCGTGCTGCGATGATATGCAGAGCTGTTTTATTGGCCTTGTTTGTCCATGCTTTCTGTTTGGGAAGAATGCTGAACTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATACAGTCTGCTGCCTGTTGACTGATGGACTTTTCTTGAATCTACCTGGATGCGTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTACGGTCTAAGTACAATTTGCCGGAAGCACCTTGTGGAGACTTTGTGACCCACTTTTTCTGCCATTTCTGCGCTATCTGTCAAGAATACAGAGAGATTCGTGAAAGAGCTAGAGGATCCGGTCCCCATGATTTGAGTTTGGCTGTTGTTACCCCGCCAACAACTCAAACAATGGATTCTAACCCAGAAAAATAG
BLAST of CmoCh06G000520 vs. Swiss-Prot
Match: PCR10_ARATH (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana GN=PCR10 PE=2 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 6.5e-67 Identity = 114/181 (62.98%), Postives = 136/181 (75.14%), Query Frame = 1
BLAST of CmoCh06G000520 vs. Swiss-Prot
Match: CNR5_MAIZE (Cell number regulator 5 OS=Zea mays GN=CNR5 PE=2 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 8.3e-62 Identity = 113/186 (60.75%), Postives = 131/186 (70.43%), Query Frame = 1
BLAST of CmoCh06G000520 vs. Swiss-Prot
Match: CNR2_MAIZE (Cell number regulator 2 OS=Zea mays GN=CNR2 PE=2 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 6.6e-19 Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 1
BLAST of CmoCh06G000520 vs. Swiss-Prot
Match: PCR7_ARATH (Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana GN=PCR7 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.9e-18 Identity = 54/147 (36.73%), Postives = 81/147 (55.10%), Query Frame = 1
BLAST of CmoCh06G000520 vs. Swiss-Prot
Match: PCR6_ARATH (Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana GN=PCR6 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.3e-18 Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 1
BLAST of CmoCh06G000520 vs. TrEMBL
Match: A0A0A0LH64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G815450 PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 1.4e-95 Identity = 166/189 (87.83%), Postives = 174/189 (92.06%), Query Frame = 1
BLAST of CmoCh06G000520 vs. TrEMBL
Match: M5VR57_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011977mg PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.5e-73 Identity = 132/185 (71.35%), Postives = 146/185 (78.92%), Query Frame = 1
BLAST of CmoCh06G000520 vs. TrEMBL
Match: B9HDG6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02580g PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 3.3e-73 Identity = 129/186 (69.35%), Postives = 143/186 (76.88%), Query Frame = 1
BLAST of CmoCh06G000520 vs. TrEMBL
Match: V4S666_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012860mg PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 3.6e-72 Identity = 130/184 (70.65%), Postives = 144/184 (78.26%), Query Frame = 1
BLAST of CmoCh06G000520 vs. TrEMBL
Match: V7CI30_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G036700g PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 8.9e-71 Identity = 130/186 (69.89%), Postives = 145/186 (77.96%), Query Frame = 1
BLAST of CmoCh06G000520 vs. TAIR10
Match: AT2G40935.1 (AT2G40935.1 PLAC8 family protein) HSP 1 Score: 255.0 bits (650), Expect = 3.7e-68 Identity = 114/181 (62.98%), Postives = 136/181 (75.14%), Query Frame = 1
BLAST of CmoCh06G000520 vs. TAIR10
Match: AT3G18470.1 (AT3G18470.1 PLAC8 family protein) HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19 Identity = 54/147 (36.73%), Postives = 81/147 (55.10%), Query Frame = 1
BLAST of CmoCh06G000520 vs. TAIR10
Match: AT1G49030.1 (AT1G49030.1 PLAC8 family protein) HSP 1 Score: 93.2 bits (230), Expect = 1.8e-19 Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 1
BLAST of CmoCh06G000520 vs. TAIR10
Match: AT3G18460.1 (AT3G18460.1 PLAC8 family protein) HSP 1 Score: 87.4 bits (215), Expect = 1.0e-17 Identity = 48/145 (33.10%), Postives = 74/145 (51.03%), Query Frame = 1
BLAST of CmoCh06G000520 vs. TAIR10
Match: AT1G68610.1 (AT1G68610.1 PLANT CADMIUM RESISTANCE 11) HSP 1 Score: 85.5 bits (210), Expect = 3.9e-17 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 1
BLAST of CmoCh06G000520 vs. NCBI nr
Match: gi|659084975|ref|XP_008443175.1| (PREDICTED: protein PLANT CADMIUM RESISTANCE 10 isoform X2 [Cucumis melo]) HSP 1 Score: 359.0 bits (920), Expect = 5.1e-96 Identity = 166/189 (87.83%), Postives = 176/189 (93.12%), Query Frame = 1
BLAST of CmoCh06G000520 vs. NCBI nr
Match: gi|659084973|ref|XP_008443174.1| (PREDICTED: protein PLANT CADMIUM RESISTANCE 10 isoform X1 [Cucumis melo]) HSP 1 Score: 359.0 bits (920), Expect = 5.1e-96 Identity = 166/189 (87.83%), Postives = 176/189 (93.12%), Query Frame = 1
BLAST of CmoCh06G000520 vs. NCBI nr
Match: gi|449437652|ref|XP_004136605.1| (PREDICTED: protein PLANT CADMIUM RESISTANCE 10 isoform X2 [Cucumis sativus]) HSP 1 Score: 357.1 bits (915), Expect = 1.9e-95 Identity = 166/189 (87.83%), Postives = 174/189 (92.06%), Query Frame = 1
BLAST of CmoCh06G000520 vs. NCBI nr
Match: gi|778685030|ref|XP_011652148.1| (PREDICTED: protein PLANT CADMIUM RESISTANCE 10 isoform X1 [Cucumis sativus]) HSP 1 Score: 357.1 bits (915), Expect = 1.9e-95 Identity = 166/189 (87.83%), Postives = 174/189 (92.06%), Query Frame = 1
BLAST of CmoCh06G000520 vs. NCBI nr
Match: gi|657989436|ref|XP_008386920.1| (PREDICTED: protein PLANT CADMIUM RESISTANCE 10 [Malus domestica]) HSP 1 Score: 287.0 bits (733), Expect = 2.5e-74 Identity = 135/185 (72.97%), Postives = 148/185 (80.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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