Carg01267 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01267
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein PLANT CADMIUM RESISTANCE like
Location	Cucurbita_argyrosperma_scaffold_002 : 1844925 .. 1847714 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGAATACAAGGATTAGAAGTTGCCGACTCCTAAGTACATCCCAAGATCTCCCCCGATCGCATCCACATTCCTTCCGATTCATTCCCGCCGTGCCCTCCCGGTGAAGAAGACAATCAAACACGATCCTTCTCCTGCTTTGATCCACAGGTTCATCCTCGTTTGGGTTCGTCGCTGCTATTCTATTTTAACTCTTTACGCATACCGAACAAACATCTTCGATTTAGGAACTCCAAAACCTAATGGTGTTTCTTAATGTTGCTTAATGTTATCTTACTATGAAGTTTTTGTGGCGTTTTTGGGCGTTTCTCATTCCAATGCTCGTTTTTCATGTTGAGCCCTTGAAAAATTTTAGCTCCATTTTTCTTTCCGTATATGGTTTACATCCTGGTTTTAATTGAGGATTCATCGGATCAGATAAAGTGTGCAAAAGGAATTAGTAGATCGAAGTGTAAAAATCATGTGTAAGTGAGGGGAGGGTAAAATGTAGGTTTTATGAATTGCATTTTTGATGATTCTTAATGAAGCTTACAGGTTGGATTCGTTTGAAAGAGATTGGGAGGGATTTTGTGGTGCATCAGAGCTAGATGGATGGCGGAATAAGTTATGTCCCTCCTGCATATGTTCCTCTAGGGCAGTCTGATTCAGAAGCGGAGATTATTTCCAGAGATGAGGGCAGCCATTCCACACCTAATGAACTTAAGGATGGATTGTCACAATGGTCGTCTGGAATATGTGCGTGCTGCGATGATATGCAGAGCTGTACGCTACTTTCTGCCTTCTGACCTTGATTTATGCGAAGGAAAAGTTATGAAGGTGCCTCTTGAGTATAGAAAGGAAATGTATCATTACTTTGCATGTGTTCTTATATCAAATTGATAAATATTTGAATTGTAGGCCAATGGCTGTTTCGATTAGGGAACCCATCATATCCTGTTGTGAAAGCTTGCTCTGCCATTTATTTGTTGAGTTTTCTAAGATCCAAGGAAGCGCTGAATTTTTCACTATGATTAGGTTTATTATAGGAAACCTGATCAGCCCTAAACGATGGGCATAGAGCGTGAAGAACTTTGATTAGTTCTCTAACATGTTCATGTTGTAGTATCAATTAGAGCCCCCAGTTTCAATCATCGAAGTGTGTATAAAGATTCGGACAGTTGATCTTTTGCGCCTTTAGTTTGTTAGATATCAAACAGAATTTAGATAATATGATGATTTTATACGAATCTCTTTTTATATTTTTGATGGTGGTTGAATATTACTATCAAGTCTAAGAGCATTGCATTTAAAATGATCTCGCATGTTAAATGGGAAGCTCATTGCAACTTTTCTTGGCGCAGGTTTTATTGGCCTGGTTTGTCCATGCTTTCTGTTTGGGAAGAATGCTGAACTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATACAGTCTGCTGCTTGTTGACTGATGGACTTTTCTTGAATCTACCTGGATGCGTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTACGGTCTAAGTACAATTTGCCGGTATGATATCGTACTCTTATTACTTTTTCATTGTTCATTGTCTTGCAAGCATGAATTATTTACAGATTATACATGGCACATAGCATTTATAAACGATGTTATGCATTAATCTTTTCTCCTGATGGCCAAGAGAATTCGAAGTTTTAAGTGGCTTTTTTCTTTACATTTGTCTCTGACACAAGACTGGGAGTTAGTTCTAATGTAAGGACCCGACTTTTCGTACGCATAGCGATCAGAGCCGTTATAAATGGTATCAAAGCCAAACACCAAGCAGTGTGCTAGCGAGGACGCTGGATTCCCAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAATGAAGCATTCCTTGTAAGGGTGTGGAAACCTCTCTCTCTAACAAATGCGTTCTAAAATCTTGAGGAGAAGCCCTTGAAGGGAAAGCCCAGAGGACAATATCTGCCCATGGTGGGTTTGGAAGGTTACAAAAGCACATTCCTTTTAAGGTCCGACAGCCTAAAGACATTTTAAATCCTTGAGGGGAAGCCCTTGAAGGGAAACCCAAAGAGGACCTATGGGTAGGTTTGGGTTGTGTTACATCTAATGCCTTTATCCTCCATATAATATAGCCCAGCTCACTACAAGTTCTCTAGTCAATGAATTGAGTTGCGGATTGCTATGCTTCCATGAGCCACACCTAATAATCTCTGAAATGTGATGCAGGAAGCACCTTGTGGAGACTTTGTGACCCACTTTTTCTGCCATTTCTGCGCTATCTGTCAAGAATACAGAGAGATTCGTGAAAGAGCTAGAGGATCCGGTCCCCATGATTTGAGTTTGGCTGTTGTTACCCCGCCAACAACTCAAACAATGGATTCTAACCCAGAAAAATAGTTCCTTAATTGCTGGAGCTACCGAGAAATACCGGTAACTTGTTATAGATTTGCTCGCTTAGCACCCAGTTCTTTCTTTCCCTCTTTTGTTGTTACTGGACTTTTCAGAGTTTCTTCTTTTCCTCTTTTTTTATTATGAGATTTCCACCCCCTTCTTTCGTCTATTTAACATTGTAGTATTATTAGAAATTCAGTCCTACTAGTGATTGATAAAATTATGTTTTAAACATGAGTCATAATGATTGGTAAATTGATATTAAATATACTGTTTGTTTGATGTTGGTCTTTAAGATTCATAATTTACTATGGTTGATGTATTATTTCGAAAGAGGGCCAAAACCTAAAGC

mRNA sequence

TACGAATACAAGGATTAGAAGTTGCCGACTCCTAAGTACATCCCAAGATCTCCCCCGATCGCATCCACATTCCTTCCGATTCATTCCCGCCGTGCCCTCCCGGTGAAGAAGACAATCAAACACGATCCTTCTCCTGCTTTGATCCACAGGTTCATCCTCGTTTGGGTTCGTCGCTGCTATTCTATTTTAACTCTTTACGCATACCGAACAAACATCTTCGATTTAGGAACTCCAAAACCTAATGGTGTTTCTTAATGTTGCTTAATGTTATCTTACTATGAAGTTTTTGTGGCGTTTTTGGGCGTTTCTCATTCCAATGCTCGTTTTTCATGTTGAGCCCTTGAAAAATTTTAGCTCCATTTTTCTTTCCGTATATGGTTTACATCCTGGTTTTAATTGAGGATTCATCGGATCAGATAAAGTGTGCAAAAGGAATTAGTAGATCGAAGTGTAAAAATCATGTGTAAGTGAGGGGAGGGTAAAATGTAGGTTTTATGAATTGCATTTTTGATGATTCTTAATGAAGCTTACAGGTTGGATTCGTTTGAAAGAGATTGGGAGGGATTTTGTGGTGCATCAGAGCTAGATGGATGGCGGAATAAGTTATGTCCCTCCTGCATATGTTCCTCTAGGGCAGTCTGATTCAGAAGCGGAGATTATTTCCAGAGATGAGGGCAGCCATTCCACACCTAATGAACTTAAGGATGGATTGTCACAATGGTCGTCTGGAATATGTGCGTGCTGCGATGATATGCAGAGCTGTTTTATTGGCCTGGTTTGTCCATGCTTTCTGTTTGGGAAGAATGCTGAACTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATACAGTCTGCTGCTTGTTGACTGATGGACTTTTCTTGAATCTACCTGGATGCGTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTACGGTCTAAGTACAATTTGCCGGAAGCACCTTGTGGAGACTTTGTGACCCACTTTTTCTGCCATTTCTGCGCTATCTGTCAAGAATACAGAGAGATTCGTGAAAGAGCTAGAGGATCCGGTCCCCATGATTTGAGTTTGGCTGTTGTTACCCCGCCAACAACTCAAACAATGGATTCTAACCCAGAAAAATAGTTCCTTAATTGCTGGAGCTACCGAGAAATACCGGTAACTTGTTATAGATTTGCTCGCTTAGCACCCAGTTCTTTCTTTCCCTCTTTTGTTGTTACTGGACTTTTCAGAGTTTCTTCTTTTCCTCTTTTTTTATTATGAGATTTCCACCCCCTTCTTTCGTCTATTTAACATTGTAGTATTATTAGAAATTCAGTCCTACTAGTGATTGATAAAATTATGTTTTAAACATGAGTCATAATGATTGGTAAATTGATATTAAATATACTGTTTGTTTGATGTTGGTCTTTAAGATTCATAATTTACTATGGTTGATGTATTATTTCGAAAGAGGGCCAAAACCTAAAGC

Coding sequence (CDS)

ATGGATGGCGGAATAAGTTATGTCCCTCCTGCATATGTTCCTCTAGGGCAGTCTGATTCAGAAGCGGAGATTATTTCCAGAGATGAGGGCAGCCATTCCACACCTAATGAACTTAAGGATGGATTGTCACAATGGTCGTCTGGAATATGTGCGTGCTGCGATGATATGCAGAGCTGTTTTATTGGCCTGGTTTGTCCATGCTTTCTGTTTGGGAAGAATGCTGAACTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATACAGTCTGCTGCTTGTTGACTGATGGACTTTTCTTGAATCTACCTGGATGCGTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTACGGTCTAAGTACAATTTGCCGGAAGCACCTTGTGGAGACTTTGTGACCCACTTTTTCTGCCATTTCTGCGCTATCTGTCAAGAATACAGAGAGATTCGTGAAAGAGCTAGAGGATCCGGTCCCCATGATTTGAGTTTGGCTGTTGTTACCCCGCCAACAACTCAAACAATGGATTCTAACCCAGAAAAATAG

Protein sequence

MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCFIGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPTTQTMDSNPEK

Homology

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BLAST of Carg01267 vs. NCBI nr
Match: XP_022951648.1 (protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita moschata] >XP_022951656.1 protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita moschata])

HSP 1 Score: 409.8 bits (1052), Expect = 4.9e-111
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF
Sbjct: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA
Sbjct: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180

Query: 181 TQTMDSNPEK 191
           TQTMDSNPEK
Sbjct: 181 TQTMDSNPEK 190

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BLAST of Carg01267 vs. NCBI nr
Match: XP_022971620.1 (protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita maxima])

HSP 1 Score: 405.6 bits (1041), Expect = 9.3e-110
Identity = 188/190 (98.95%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           MDGGISYVPPAYVPLGQSDSEAEIISRDEG HSTPNELKDGLSQWSSGICACCDDMQSCF
Sbjct: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGIHSTPNELKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IGL CPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA
Sbjct: 61  IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180

Query: 181 TQTMDSNPEK 191
           TQTMDSNPEK
Sbjct: 181 TQTMDSNPEK 190

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BLAST of Carg01267 vs. NCBI nr
Match: XP_023540976.1 (protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita pepo subsp. pepo] >XP_023540977.1 protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita pepo subsp. pepo] >XP_023540978.1 protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403.3 bits (1035), Expect = 4.6e-109
Identity = 186/190 (97.89%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           MDGGISYVPPAYVPLGQSD EAEIISRDEGSHS PNELKDGLSQWSSGICACCDDMQSCF
Sbjct: 1   MDGGISYVPPAYVPLGQSDPEAEIISRDEGSHSPPNELKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           +GL CPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA
Sbjct: 61  VGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180

Query: 181 TQTMDSNPEK 191
           TQTMDSNPEK
Sbjct: 181 TQTMDSNPEK 190

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BLAST of Carg01267 vs. NCBI nr
Match: XP_008443175.1 (PREDICTED: protein PLANT CADMIUM RESISTANCE 10 [Cucumis melo])

HSP 1 Score: 359.0 bits (920), Expect = 1.0e-95
Identity = 166/189 (87.83%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           MDG  SYVPPAYVP+ QSDSE EIISRDE S+ TPN+LKDGLSQWSSGICACCDDMQSCF
Sbjct: 1   MDGPRSYVPPAYVPISQSDSETEIISRDE-SNPTPNQLKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IGL CPCFLFGKNAELLGS+T+FGSCATHFILWALTNTVCCLL+DGL  N+PGC LACYA
Sbjct: 61  IGLFCPCFLFGKNAELLGSQTIFGSCATHFILWALTNTVCCLLSDGLLWNVPGCFLACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERA GSG H+L+L VVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERAGGSGSHELNLTVVTPPT 180

Query: 181 TQTMDSNPE 190
           TQTM+SNPE
Sbjct: 181 TQTMESNPE 188

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BLAST of Carg01267 vs. NCBI nr
Match: XP_004136605.1 (PREDICTED: protein PLANT CADMIUM RESISTANCE 10 isoform X2 [Cucumis sativus] >KGN59381.1 hypothetical protein Csa_3G815450 [Cucumis sativus])

HSP 1 Score: 357.1 bits (915), Expect = 3.8e-95
Identity = 166/189 (87.83%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           MDG  SYVPPAYVP+ QSD EAEI SRDE S+ TPNELKDGLSQWSSGICACCDDMQSCF
Sbjct: 1   MDGPRSYVPPAYVPISQSDLEAEISSRDE-SNPTPNELKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IGL CPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLL+DG+  N+PGC LACYA
Sbjct: 61  IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLSDGILWNVPGCFLACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERA G G H+L+L VVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERAGGYGSHELNLTVVTPPT 180

Query: 181 TQTMDSNPE 190
           TQTM+SNPE
Sbjct: 181 TQTMESNPE 188

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BLAST of Carg01267 vs. TAIR10
Match: AT2G40935.1 (PLAC8 family protein)

HSP 1 Score: 255.0 bits (650), Expect = 3.7e-68
Identity = 114/181 (62.98%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 7   YVPPAYVPLGQSDSEAEIISRDEGSHSTPNE-LKDGLSQWSSGICACCDDMQSCFIGLVC 66
           YVPP+Y+PL QSD++ E+ +         +E  KD   QWSSGICAC DDMQSC +GL C
Sbjct: 8   YVPPSYIPLTQSDADTEVETTTPNLEIAVSESTKDDPRQWSSGICACFDDMQSCCVGLFC 67

Query: 67  PCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRK 126
           PC++FGKNAELLGS T  G C TH I WAL NT+CC  T+G  L LPGC ++CYACGYRK
Sbjct: 68  PCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYACGYRK 127

Query: 127 ALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPTTQTMD 186
           +LR+KYNL EAPCGDFVTHFFCH CAICQEYREIRE++ GS P D+ +A+   P  QTM+
Sbjct: 128 SLRAKYNLQEAPCGDFVTHFFCHLCAICQEYREIREQSSGSYPLDMKMAITNAPLAQTME 187

[Close]

BLAST of Carg01267 vs. TAIR10
Match: AT3G18470.1 (PLAC8 family protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19
Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 44  QWSSGICACCDDMQSCFIGLVCPCFLFGKNAELLG-SRTMFGSCATHFILWALTNTVCCL 103
           QW+SG+ +C +D ++  +   CPC  FG+ A++    RT  G C   + L      +CC+
Sbjct: 4   QWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGL------ICCV 63

Query: 104 LTDGLFLNLPGCVLACYACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRER 163
                 + LP      ++C YR  +RSK+ LPE+P  D VTHFFC  CA+CQE+RE++ R
Sbjct: 64  ------VGLP----CLFSCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTR 123

Query: 164 ARG-----SGPHDLSLAVVTPPTTQTM 185
                   SG    ++A   PP +Q M
Sbjct: 124 GLDPSIGWSGNMQRTMA---PPMSQQM 131

[Close]

BLAST of Carg01267 vs. TAIR10
Match: AT1G49030.1 (PLAC8 family protein)

HSP 1 Score: 93.2 bits (230), Expect = 1.8e-19
Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 9   PPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCFIGLVCPCF 68
           PP Y+    + ++   +S     H+ P       S W+SG+  C +D ++  I    P  
Sbjct: 59  PPTYINQSATFNQPYGVSMAGPVHTQP-------SNWTSGLFDCMNDGENALITCCFPFV 118

Query: 69  LFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRKALR 128
            FG+ AE++       SC T  +L+ L   +CCL        +P CV   Y C +R  LR
Sbjct: 119 TFGQIAEVIDEGAT--SCGTAGMLYGL---ICCLFA------IP-CV---YTCTFRTKLR 178

Query: 129 SKYNLPEAPCGDFVTHFFCHFCAICQEYREIRER 163
           SKY LP+AP  D++TH FC +CA+CQEYRE++ R
Sbjct: 179 SKYGLPDAPAPDWITHCFCEYCALCQEYRELKNR 190

[Close]

BLAST of Carg01267 vs. TAIR10
Match: AT3G18460.1 (PLAC8 family protein)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-17
Identity = 48/145 (33.10%), Postives = 74/145 (51.03%), Query Frame = 0


Query: 45  WSSGICACCDDMQSCFIGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLT 104
           WSS +  C +D ++  I  + PC   G+ AE++        CAT  +L+ +         
Sbjct: 54  WSSDLFDCMNDSENAVITCLAPCVTLGQIAEIVDEGAT--PCATGGLLYGMI-------- 113

Query: 105 DGLFLNLPGCVLACYACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERA- 164
              F+ +P      Y+C +R  +R+KY LP+AP  D++TH FC  CA+CQEYRE++ R  
Sbjct: 114 --FFIGVP----FVYSCMFRAKMRNKYGLPDAPAPDWITHLFCEHCALCQEYRELKHRGF 173

Query: 165 ----RGSGPHDLSLAVVTPPTTQTM 185
                 +G       V++PPT Q M
Sbjct: 174 DPNIGWAGNVQAQQPVMSPPTGQRM 182

[Close]

BLAST of Carg01267 vs. TAIR10
Match: AT1G68610.1 (PLANT CADMIUM RESISTANCE 11)

HSP 1 Score: 86.7 bits (213), Expect = 1.7e-17
Identity = 48/132 (36.36%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 31  SHSTPNELKDGLSQWSSGICACCDDMQSCFIGLVCPCFLFGKNAELL--GSRTMFGSCAT 90
           S+  P++ +     WS+ +C C  D+ SC +   CPC  FG+ AE++  GS +   S A 
Sbjct: 5   SNDQPSQGRIKAKDWSTDLCECWMDINSCCLTCWCPCVAFGRIAEVVDRGSTSCGVSGAM 64

Query: 91  HFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRKALRSKYNLPEAPCGDFVTHFFCH 150
           + I++ LT                G  L  Y+C YR  LR++YNL E PC D   HF C 
Sbjct: 65  YMIIFMLT-------------GYGGSSL--YSCFYRTKLRAQYNLKERPCCDCCVHFCCE 121

Query: 151 FCAICQEYREIR 161
            CA+CQEYR+++
Sbjct: 125 PCALCQEYRQLQ 121

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BLAST of Carg01267 vs. Swiss-Prot
Match: sp|Q8S8T8|PCR10_ARATH (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.6e-67
Identity = 114/181 (62.98%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 7   YVPPAYVPLGQSDSEAEIISRDEGSHSTPNE-LKDGLSQWSSGICACCDDMQSCFIGLVC 66
           YVPP+Y+PL QSD++ E+ +         +E  KD   QWSSGICAC DDMQSC +GL C
Sbjct: 8   YVPPSYIPLTQSDADTEVETTTPNLEIAVSESTKDDPRQWSSGICACFDDMQSCCVGLFC 67

Query: 67  PCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRK 126
           PC++FGKNAELLGS T  G C TH I WAL NT+CC  T+G  L LPGC ++CYACGYRK
Sbjct: 68  PCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYACGYRK 127

Query: 127 ALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPTTQTMD 186
           +LR+KYNL EAPCGDFVTHFFCH CAICQEYREIRE++ GS P D+ +A+   P  QTM+
Sbjct: 128 SLRAKYNLQEAPCGDFVTHFFCHLCAICQEYREIREQSSGSYPLDMKMAITNAPLAQTME 187

[Close]

BLAST of Carg01267 vs. Swiss-Prot
Match: sp|B4FF80|CNR5_MAIZE (Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 8.4e-62
Identity = 113/186 (60.75%), Postives = 131/186 (70.43%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           M G  SYVPP Y+PL   D+E + +   E +H+T  +L    +QWSSGICAC DD QSC 
Sbjct: 1   MAGKGSYVPPQYIPLYSLDTEEDRVPAVEENHATRPKLNQDPTQWSSGICACFDDPQSCC 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IG +CPCFLFGKNA+ LGS T+ GSC TH +LW L  ++CC+ T GL L +PG  +ACYA
Sbjct: 61  IGAICPCFLFGKNAQFLGSGTLAGSCTTHCMLWGLLTSLCCVFTGGLVLAVPGSAVACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRER-ARGSGPHDLSLAVVTPP 180
           CGYR ALR+KYNLPEAPCGD  TH FCH CAICQEYREIRER   GS P       VTPP
Sbjct: 121 CGYRSALRTKYNLPEAPCGDLTTHLFCHLCAICQEYREIRERTGSGSSP----APNVTPP 180

Query: 181 TTQTMD 186
             QTMD
Sbjct: 181 PVQTMD 182

[Close]

BLAST of Carg01267 vs. Swiss-Prot
Match: sp|Q9LS43|PCR7_ARATH (Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-18
Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 44  QWSSGICACCDDMQSCFIGLVCPCFLFGKNAELLG-SRTMFGSCATHFILWALTNTVCCL 103
           QW+SG+ +C +D ++  +   CPC  FG+ A++    RT  G C   + L      +CC+
Sbjct: 4   QWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGL------ICCV 63

Query: 104 LTDGLFLNLPGCVLACYACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRER 163
                 + LP      ++C YR  +RSK+ LPE+P  D VTHFFC  CA+CQE+RE++ R
Sbjct: 64  ------VGLP----CLFSCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTR 123

Query: 164 ARG-----SGPHDLSLAVVTPPTTQTM 185
                   SG    ++A   PP +Q M
Sbjct: 124 GLDPSIGWSGNMQRTMA---PPMSQQM 131

[Close]

BLAST of Carg01267 vs. Swiss-Prot
Match: sp|Q9M9A5|PCR6_ARATH (Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=PCR6 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.3e-18
Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 9   PPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCFIGLVCPCF 68
           PP Y+    + ++   +S     H+ P       S W+SG+  C +D ++  I    P  
Sbjct: 59  PPTYINQSATFNQPYGVSMAGPVHTQP-------SNWTSGLFDCMNDGENALITCCFPFV 118

Query: 69  LFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRKALR 128
            FG+ AE++       SC T  +L+ L   +CCL        +P CV   Y C +R  LR
Sbjct: 119 TFGQIAEVIDEGAT--SCGTAGMLYGL---ICCLFA------IP-CV---YTCTFRTKLR 178

Query: 129 SKYNLPEAPCGDFVTHFFCHFCAICQEYREIRER 163
           SKY LP+AP  D++TH FC +CA+CQEYRE++ R
Sbjct: 179 SKYGLPDAPAPDWITHCFCEYCALCQEYRELKNR 190

[Close]

BLAST of Carg01267 vs. Swiss-Prot
Match: sp|D9HP19|CNR3_MAIZE (Cell number regulator 3 OS=Zea mays OX=4577 GN=CNR3 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.7e-18
Identity = 50/125 (40.00%), Postives = 68/125 (54.40%), Query Frame = 0


Query: 44  QWSSGICACCDDMQSCFIGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLL 103
           +WSS +  C DD   C +   CPC  FG+ AE++       SC T   L+AL        
Sbjct: 31  EWSSRLLDCFDDFDICCMTFWCPCITFGRTAEIVDHG--MTSCGTSAALFALIQ------ 90

Query: 104 TDGLFLNLPGCVLACYACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERA 163
               +L+   C  A ++C YR  LR+++ LPEAPC DF+ H  C  CA+CQEYRE+  +A
Sbjct: 91  ----WLSGSQCTWA-FSCTYRTRLRAQHGLPEAPCADFLVHLCCLHCALCQEYREL--KA 140

Query: 164 RGSGP 169
           RG  P
Sbjct: 151 RGYEP 140

[Close]

BLAST of Carg01267 vs. TrEMBL
Match: tr|A0A1S3B7G5|A0A1S3B7G5_CUCME (protein PLANT CADMIUM RESISTANCE 10 OS=Cucumis melo OX=3656 GN=LOC103486838 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 6.6e-96
Identity = 166/189 (87.83%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           MDG  SYVPPAYVP+ QSDSE EIISRDE S+ TPN+LKDGLSQWSSGICACCDDMQSCF
Sbjct: 1   MDGPRSYVPPAYVPISQSDSETEIISRDE-SNPTPNQLKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IGL CPCFLFGKNAELLGS+T+FGSCATHFILWALTNTVCCLL+DGL  N+PGC LACYA
Sbjct: 61  IGLFCPCFLFGKNAELLGSQTIFGSCATHFILWALTNTVCCLLSDGLLWNVPGCFLACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERA GSG H+L+L VVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERAGGSGSHELNLTVVTPPT 180

Query: 181 TQTMDSNPE 190
           TQTM+SNPE
Sbjct: 181 TQTMESNPE 188

[Close]

BLAST of Carg01267 vs. TrEMBL
Match: tr|A0A0A0LH64|A0A0A0LH64_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815450 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.5e-95
Identity = 166/189 (87.83%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           MDG  SYVPPAYVP+ QSD EAEI SRDE S+ TPNELKDGLSQWSSGICACCDDMQSCF
Sbjct: 1   MDGPRSYVPPAYVPISQSDLEAEISSRDE-SNPTPNELKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IGL CPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLL+DG+  N+PGC LACYA
Sbjct: 61  IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLSDGILWNVPGCFLACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERA G G H+L+L VVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERAGGYGSHELNLTVVTPPT 180

Query: 181 TQTMDSNPE 190
           TQTM+SNPE
Sbjct: 181 TQTMESNPE 188

[Close]

BLAST of Carg01267 vs. TrEMBL
Match: tr|A0A2R6QVJ1|A0A2R6QVJ1_ACTCH (Protein PLANT CADMIUM RESISTANCE like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc13263 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.3e-75
Identity = 134/189 (70.90%), Postives = 152/189 (80.42%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEII--SRDEGSHSTPNELKDGLSQWSSGICACCDDMQS 60
           M G  +YVPP Y+PLGQSDSEAE++  + D    + P    DG +QWSSGICACCDDMQS
Sbjct: 1   MGGQSNYVPPPYIPLGQSDSEAEVVLHNDDIPVPARPGISNDGPAQWSSGICACCDDMQS 60

Query: 61  CFIGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLAC 120
           C IGLVCPCFLFGKNAE LGS T+ GSC THF++WAL NTVCCLLTDG+ L LPGC ++C
Sbjct: 61  CCIGLVCPCFLFGKNAEFLGSGTLMGSCMTHFVMWALVNTVCCLLTDGVLLGLPGCFISC 120

Query: 121 YACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTP 180
           YACGYR+ALR KYNL EAPCGDFVTHFFCH CAICQEYREIRER+  S P DL+L VVT 
Sbjct: 121 YACGYRRALRLKYNLQEAPCGDFVTHFFCHLCAICQEYREIRERSGDSNPPDLNLWVVTA 180

Query: 181 PTTQTMDSN 188
           P  QTM+S+
Sbjct: 181 PPVQTMESS 189

[Close]

BLAST of Carg01267 vs. TrEMBL
Match: tr|A0A2R6Q4A0|A0A2R6Q4A0_ACTCH (Protein PLANT CADMIUM RESISTANCE like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc23063 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 3.8e-75
Identity = 132/189 (69.84%), Postives = 151/189 (79.89%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEII--SRDEGSHSTPNELKDGLSQWSSGICACCDDMQS 60
           M+G  +YVPP Y+PLGQSDSEAE++  + D    + P    DG +QWSSGICACCDDMQS
Sbjct: 1   MEGQSNYVPPPYIPLGQSDSEAEVVLHNDDMPVPACPGINSDGPAQWSSGICACCDDMQS 60

Query: 61  CFIGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLAC 120
           C IGLVCPCFLFGKNAE LGS T+ GSC THF++WAL NTVCCLLTDG+ L LPGC ++C
Sbjct: 61  CCIGLVCPCFLFGKNAEFLGSGTLMGSCMTHFVMWALVNTVCCLLTDGILLGLPGCFISC 120

Query: 121 YACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTP 180
           YACGYR+ LR KYNL EAPCGDFVTHFFCH CAICQEYREI ER+  S P DL+L VVT 
Sbjct: 121 YACGYRRELRLKYNLQEAPCGDFVTHFFCHLCAICQEYREIHERSGHSNPPDLNLGVVTA 180

Query: 181 PTTQTMDSN 188
           P  QTM+S+
Sbjct: 181 PPVQTMESS 189

[Close]

BLAST of Carg01267 vs. TrEMBL
Match: tr|A0A2P6RH78|A0A2P6RH78_ROSCH (Putative PLAC8 motif-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0495251 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.4e-74
Identity = 129/185 (69.73%), Postives = 148/185 (80.00%), Query Frame = 0


Query: 6   SYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCFIGLVC 65
           SY PP+Y+PLGQSDS + ++ R+E      N + DG  QWSSGICACCDD QSC IGL C
Sbjct: 80  SYAPPSYIPLGQSDSGSPVVLRNEDPPKQQNNV-DGPIQWSSGICACCDDTQSCCIGLFC 139

Query: 66  PCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRK 125
           PC+LFGKNAE LGS T+ GSC THFILW L NTVCCLLTDGL L +PGC +ACYACGYR+
Sbjct: 140 PCYLFGKNAEFLGSGTLMGSCTTHFILWVLVNTVCCLLTDGLILGIPGCFVACYACGYRR 199

Query: 126 ALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPTTQTMD 185
           ALRSKYNL EAPCGDF+THFFCH CAICQEYREIRE++  SGP DL+LA+VT P  QTM+
Sbjct: 200 ALRSKYNLQEAPCGDFITHFFCHLCAICQEYREIREKSAESGPGDLNLAIVTAPAVQTME 259

Query: 186 SNPEK 191
              +K
Sbjct: 260 PGLDK 263

The following BLAST results are available for this feature:

BLAST of Carg01267 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951648.1	4.9e-111	100.00	protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita moschata] >XP_022951656.1 pr...	[more]
XP_022971620.1	9.3e-110	98.95	protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita maxima]	[more]
XP_023540976.1	4.6e-109	97.89	protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita pepo subsp. pepo] >XP_023540...	[more]
XP_008443175.1	1.0e-95	87.83	PREDICTED: protein PLANT CADMIUM RESISTANCE 10 [Cucumis melo]	[more]
XP_004136605.1	3.8e-95	87.83	PREDICTED: protein PLANT CADMIUM RESISTANCE 10 isoform X2 [Cucumis sativus] >KGN...	[more]

BLAST of Carg01267 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40935.1	3.7e-68	62.98	PLAC8 family protein	[more]
AT3G18470.1	1.1e-19	36.05	PLAC8 family protein	[more]
AT1G49030.1	1.8e-19	35.71	PLAC8 family protein	[more]
AT3G18460.1	1.0e-17	33.10	PLAC8 family protein	[more]
AT1G68610.1	1.7e-17	36.36	PLANT CADMIUM RESISTANCE 11	[more]

BLAST of Carg01267 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8S8T8\|PCR10_ARATH	6.6e-67	62.98	Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=...	[more]
sp\|B4FF80\|CNR5_MAIZE	8.4e-62	60.75	Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1	[more]
sp\|Q9LS43\|PCR7_ARATH	2.0e-18	36.05	Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 ...	[more]
sp\|Q9M9A5\|PCR6_ARATH	3.3e-18	35.71	Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=PCR6 PE=2 ...	[more]
sp\|D9HP19\|CNR3_MAIZE	5.7e-18	40.00	Cell number regulator 3 OS=Zea mays OX=4577 GN=CNR3 PE=2 SV=1	[more]

BLAST of Carg01267 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B7G5\|A0A1S3B7G5_CUCME	6.6e-96	87.83	protein PLANT CADMIUM RESISTANCE 10 OS=Cucumis melo OX=3656 GN=LOC103486838 PE=4...	[more]
tr\|A0A0A0LH64\|A0A0A0LH64_CUCSA	2.5e-95	87.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815450 PE=4 SV=1	[more]
tr\|A0A2R6QVJ1\|A0A2R6QVJ1_ACTCH	1.3e-75	70.90	Protein PLANT CADMIUM RESISTANCE like OS=Actinidia chinensis var. chinensis OX=1...	[more]
tr\|A0A2R6Q4A0\|A0A2R6Q4A0_ACTCH	3.8e-75	69.84	Protein PLANT CADMIUM RESISTANCE like OS=Actinidia chinensis var. chinensis OX=1...	[more]
tr\|A0A2P6RH78\|A0A2P6RH78_ROSCH	2.4e-74	69.73	Putative PLAC8 motif-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_C...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006461	PLAC_motif_containing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01267-RA	Carg01267-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 45..158 e-value: 1.6E-25 score: 89.8
IPR006461	PLAC8 motif-containing protein	TIGRFAM	TIGR01571	TIGR01571	coord: 43..160 e-value: 3.5E-36 score: 122.1
IPR006461	PLAC8 motif-containing protein	PANTHER	PTHR15907	FAMILY NOT NAMED	coord: 40..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..190

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01267	Cla017470	Watermelon (97103) v1	carwmB0148
Carg01267	Csa3G815450	Cucumber (Chinese Long) v2	carcuB0172
Carg01267	MELO3C009701	Melon (DHL92) v3.5.1	carmeB0163
Carg01267	ClCG10G016770	Watermelon (Charleston Gray)	carwcgB0150
Carg01267	CSPI03G37250	Wild cucumber (PI 183967)	carcpiB0178
Carg01267	Cucsa.337240	Cucumber (Gy14) v1	carcgyB0198
Carg01267	CmaCh06G000610	Cucurbita maxima (Rimu)	carcmaB0216
Carg01267	CmaCh14G004680	Cucurbita maxima (Rimu)	carcmaB0202
Carg01267	CmoCh06G000520	Cucurbita moschata (Rifu)	carcmoB0227
Carg01267	CmoCh14G004750	Cucurbita moschata (Rifu)	carcmoB0213
Carg01267	Lsi03G016630	Bottle gourd (USVL1VR-Ls)	carlsiB143
Carg01267	Cp4.1LG03g04150	Cucurbita pepo (Zucchini)	carcpeB0231
Carg01267	Cp4.1LG08g13710	Cucurbita pepo (Zucchini)	carcpeB0234
Carg01267	CsGy3G034740	Cucumber (Gy14) v2	carcgybB0167
Carg01267	MELO3C009700.2	Melon (DHL92) v3.6.1	carmedB0164
Carg01267	CsaV3_3G039590	Cucumber (Chinese Long) v3	carcucB0178
Carg01267	Cla97C10G199630	Watermelon (97103) v2	carwmbB0162
Carg01267	Bhi11G002272	Wax gourd	carwgoB0197

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01267	Carg03522	Silver-seed gourd	carcarB182

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01267	Cucurbita pepo (Zucchini)	carcpeB0229