CmoCh06G000050 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G000050
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr06 : 19348 .. 21154 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCGGAGGCACCTTCCTTTTCCAACGCCCATTCCTCTGTTCCCCCGAACCGCATAAATAAATACTCCTTCCCCTCTCTTCCCTCCGCTTCCCCCTCAACCCTCCTCCTTCTCCCATGCCTTTTCTTCCTCGCCTTTCCACCTAAATGCTCTTCTTCTACGCCGGTATCTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCGCATTTTCTGCGCTTGGATTCGCCTCACTCTTCCACCTCTCCTCCATTTTTGTACAATTCCTTGTCTTTATTATAATTCTTCATCCATTCCATTTCAGACATTGTAAAACACGTTTTCCTCAAATTCGAATTTTAACCTCACCGTTTCCTGTTGTCTTGACCCTTTTTTTTCCTCCTTTATTGTCAATCAGGTAATATCATCATTGTTGTTCCCTTGCGTTGCATTGCATTGCAACCTTCTTACAGACTTTGATTCTGGTTTTGAATCTCAATGTGAGGAACGAATGGTGAGAGGGAATTTTAGTCTCTTGTACATGATTTGATGAATCAAATGGATCCTACTCTGATTATTATTGTTTCTTTATTTGTTGGTTGTATGGAGCATGCTTGTGTTTCTCTTTCTTTCTTCTTGCTATAGTACAGCCTTTCCTTTTATTTCCTCTACTTGATTTTCTACTTTGAGCTTTTTACTATTTTAGTTTGTGTTAGTGTCATTCAAAACTATTCTATTACCGGCAATTTCAACTTCTAGGTAGTGGTGTTCTGATGAGAATTGTGTTTCTGGAATTAGACACAGCGAGTTCTGTCCTGGGGTTCTGTTCAATTGTGGTGAACGTCTAGAAATGGATGAAAACGGTGGGATCAAGTTGACTGGAATCCGCCAGATTGTGAGGCTGAAAGAGACTCTCCAACACTGGCAAGGCGTCACAATTAACCCGATATCCAAAGCAGCAGCCCATGAAAATCAAAGCCAAAATCTAAATCTAAATAATGGGATCCTTTCACCAGCAATCAACAAAAGGCTGACGAATGTTTTGTGTTGTGATTCGGATGAGGAGAGCTGCCAGAGCCCTGAACATCCACCCGACGTCCCAAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGGAGGTTCATCATTCCCACTAGCTATCTTAGCCATTCGGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTTTGGATTTGATCATAGCGGCGGCCTCACATTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTGCATGGAAAGCCAGCACAAGGATCATCCTGATGACCACACCCCAGGTAATAAATTGTATTTGTATACATACCCATTTGGTTTGCAAAGCTGATAGTTGTTGACTTTGGTATGAATTCCATTAGTATTATGACATGAATAACATGCTTCCTGTTATTGACTTCGGTTGCAGCTGGGAGTTCCTTAACCATGGAAGGATAAAAAAAAATGGTTGTGATCCACAGCAGAGGGGGCGCTGTTTGCAAAGGCAGATGGATGTGTGTGTGCCTGCCACACATGAGATATGTTGTGAAATTGAAGTGTTGTGGTTTTGGTTTTGGTTTTGGTTTTGGTTTTGGTTTGGAGTCAGAAAAATTAGGGATGTGTTTAAGTAGTAATTAGAAAAGTGGAGGATTAATGTACCGTTTGGTTTGGTTTGCTTTGCTTTGCTTTGTTTTTTGCTTTTGCTTTTGTTTTTGGGAATACCCTCTCAGGGGAGATGTGAACTTCCATTTGCTTCCCTGTATTTGAATGTGAAGCACATGATTGTTTGACCA

mRNA sequence

TTTCCGGAGGCACCTTCCTTTTCCAACGCCCATTCCTCTGTTCCCCCGAACCGCATAAATAAATACTCCTTCCCCTCTCTTCCCTCCGCTTCCCCCTCAACCCTCCTCCTTCTCCCATGCCTTTTCTTCCTCGCCTTTCCACCTAAATGCTCTTCTTCTACGCCGACATTGTAAAACACACTTTGATTCTGGTTTTGAATCTCAATGTGAGGAACGAATGACACAGCGAGTTCTGTCCTGGGGTTCTGTTCAATTGTGGTGAACGTCTAGAAATGGATGAAAACGGTGGGATCAAGTTGACTGGAATCCGCCAGATTGTGAGGCTGAAAGAGACTCTCCAACACTGGCAAGGCGTCACAATTAACCCGATATCCAAAGCAGCAGCCCATGAAAATCAAAGCCAAAATCTAAATCTAAATAATGGGATCCTTTCACCAGCAATCAACAAAAGGCTGACGAATGTTTTGTGTTGTGATTCGGATGAGGAGAGCTGCCAGAGCCCTGAACATCCACCCGACGTCCCAAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGGAGGTTCATCATTCCCACTAGCTATCTTAGCCATTCGGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTTTGGATTTGATCATAGCGGCGGCCTCACATTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTGCATGGAAAGCCAGCACAAGGATCATCCTGATGACCACACCCCAGCTGGGAGTTCCTTAACCATGGAAGGATAAAAAAAAATGGTTGTGATCCACAGCAGAGGGGGCGCTGTTTGCAAAGGCAGATGGATGTGTGTGTGCCTGCCACACATGAGATATGTTGTGAAATTGAAGTGTTGTGGTTTTGGTTTTGGTTTTGGTTTTGGTTTTGGTTTGGAGTCAGAAAAATTAGGGATGTGTTTAAGTAGTAATTAGAAAAGTGGAGGATTAATGTACCGTTTGGTTTGGTTTGCTTTGCTTTGCTTTGTTTTTTGCTTTTGCTTTTGTTTTTGGGAATACCCTCTCAGGGGAGATGTGAACTTCCATTTGCTTCCCTGTATTTGAATGTGAAGCACATGATTGTTTGACCA

Coding sequence (CDS)

ATGGATGAAAACGGTGGGATCAAGTTGACTGGAATCCGCCAGATTGTGAGGCTGAAAGAGACTCTCCAACACTGGCAAGGCGTCACAATTAACCCGATATCCAAAGCAGCAGCCCATGAAAATCAAAGCCAAAATCTAAATCTAAATAATGGGATCCTTTCACCAGCAATCAACAAAAGGCTGACGAATGTTTTGTGTTGTGATTCGGATGAGGAGAGCTGCCAGAGCCCTGAACATCCACCCGACGTCCCAAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGGAGGTTCATCATTCCCACTAGCTATCTTAGCCATTCGGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTTTGGATTTGATCATAGCGGCGGCCTCACATTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTGCATGGAAAGCCAGCACAAGGATCATCCTGATGACCACACCCCAGCTGGGAGTTCCTTAACCATGGAAGGATAA

Homology

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BLAST of CmoCh06G000050 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.1e-17
Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 1


Query: 82  DVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDH-SGGLTFPCEIETFK 141
           D PKGYLAVYVG  ++RF+IP S+L+  +F+ LL +AEEEFG+DH  GGLT PC  + F+
Sbjct: 24  DAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQ 83

Query: 142 YLLKCMESQ 150
           ++  C+ +Q
Sbjct: 84  HITSCLSAQ 92

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BLAST of CmoCh06G000050 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-16
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 1


Query: 82  DVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDH-SGGLTFPCEIETFK 141
           D PKGYLAVYVG +L+RF+IP SYL+   F+ LL +AEEEFG+DH  GGLT PC  + F+
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 142 YLLKCM 147
            +  C+
Sbjct: 76  CITSCL 81

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BLAST of CmoCh06G000050 vs. Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.9e-16
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 1


Query: 82  DVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDH-SGGLTFPCEIETFK 141
           D PKGYLAVYVG +++RF+IP SY++   F+ LL +AEEEFG+DH  GGLT PC  E F+
Sbjct: 16  DAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQ 75

Query: 142 YLLKCM 147
            +  C+
Sbjct: 76  RITCCL 81

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BLAST of CmoCh06G000050 vs. Swiss-Prot
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.7e-15
Identity = 38/59 (64.41%), Postives = 45/59 (76.27%), Query Frame = 1


Query: 82  DVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDH-SGGLTFPCEIETF 140
           DVPKGY AVYVG ++RRF IP SYL+   F+ LL +AEEEFG+DH  GGLT PC+ E F
Sbjct: 25  DVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEF 83

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BLAST of CmoCh06G000050 vs. Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-14
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 1


Query: 75  QSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDH-SGGLTFP 134
           Q+     +VPKGYL VYVG ++RRF+IP SYL+   F+ LL +AEEEFG+DH  GGLT P
Sbjct: 17  QASSKSVEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIP 76

Query: 135 CEIETF 140
           C+ + F
Sbjct: 77  CKEDEF 82

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BLAST of CmoCh06G000050 vs. TrEMBL
Match: A0A0A0KRA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G534970 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 8.9e-83
Identity = 151/167 (90.42%), Postives = 156/167 (93.41%), Query Frame = 1


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDENGGIK+ GIRQIVRLKETLQHWQGVT+ P SKAAAHEN SQN N N+GILSPAINKR
Sbjct: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNVLCCDSDEE+CQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYL HSVFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTME 168
           EFGFDHSG LTFPCEIE FKYLLKCMESQ KDHPDDHTPA SS+TME
Sbjct: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTME 166

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BLAST of CmoCh06G000050 vs. TrEMBL
Match: A0A0A0LB03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346940 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.1e-79
Identity = 145/159 (91.19%), Postives = 149/159 (93.71%), Query Frame = 1


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDENGGIK+ GIRQIVRLKETLQHWQGVT+ P SKAAAHEN SQN N N+GILSPAINKR
Sbjct: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNVLCCDSDEE+CQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYL HSVFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTP 160
           EFGFDHSG LTFPCEIE FKYLLKCMESQ KDHPDDHTP
Sbjct: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTP 158

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BLAST of CmoCh06G000050 vs. TrEMBL
Match: A0A061GKZ7_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_037470 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-58
Identity = 113/156 (72.44%), Postives = 124/156 (79.49%), Query Frame = 1


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MD+ GG KLTGIRQIVRLKE LQ WQ VT+     A   E        N G +S  +NKR
Sbjct: 1   MDDQGGSKLTGIRQIVRLKEILQKWQTVTLGSRPNAPQLEE-------NQGGVSGPVNKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNV+CCDSDEESC SPE PPDVPKGYLAVYVGPELRRFIIPTSYLSH VFK+LLEKAEE
Sbjct: 61  LTNVMCCDSDEESCHSPEPPPDVPKGYLAVYVGPELRRFIIPTSYLSHPVFKILLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDD 157
           EFG++H+GGLT PCEIETFKYLLKC+E+ HK HP D
Sbjct: 121 EFGYNHNGGLTLPCEIETFKYLLKCIENNHKGHPID 149

[Close]

BLAST of CmoCh06G000050 vs. TrEMBL
Match: W9RKD3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003321 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 7.6e-58
Identity = 118/157 (75.16%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MD+N   KLTGIRQIVRLKE LQ WQ VT++P       EN+        GI  PAINKR
Sbjct: 1   MDDNIRAKLTGIRQIVRLKEILQKWQSVTLSPTKP----ENEPDAEGDPGGI-PPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LT V+CCDSDE+SCQSPE PPDVPKGYLAVYVGPELRRFIIPTSYLSHS+FKVLLEKAEE
Sbjct: 61  LTEVICCDSDEDSCQSPEPPPDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMES-QHKDHPDD 157
           EFGFDH GGLT PCEIETFKYLLKCME+  HK  PDD
Sbjct: 121 EFGFDHGGGLTIPCEIETFKYLLKCMENHHHKACPDD 152

[Close]

BLAST of CmoCh06G000050 vs. TrEMBL
Match: A0A059CU01_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03209 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.2e-57
Identity = 117/168 (69.64%), Postives = 129/168 (76.79%), Query Frame = 1


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MD+NGG KLTGIRQIVRLKE LQ WQ VT+N  SKA   E +        G +SP +NKR
Sbjct: 1   MDDNGGAKLTGIRQIVRLKELLQKWQSVTLN--SKADNPEPEE-----GQGNISPLVNKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           + N+ CCDSDEESC SPE P DVPKGYLAVYVG ELRRFIIPTSYLSHS+FKVLLEK EE
Sbjct: 61  IANLQCCDSDEESCPSPEPPADVPKGYLAVYVGQELRRFIIPTSYLSHSLFKVLLEKVEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPD-DHTPAGSSLTME 168
           EFGFDHSGGLT PCEIETFK+LLKCME+     PD D + A +S T E
Sbjct: 121 EFGFDHSGGLTIPCEIETFKFLLKCMENHQNAEPDPDESSAENSETTE 161

[Close]

BLAST of CmoCh06G000050 vs. TAIR10
Match: AT5G20810.2 (AT5G20810.2 SAUR-like auxin-responsive protein family )

HSP 1 Score: 218.4 bits (555), Expect = 3.4e-57
Identity = 113/159 (71.07%), Postives = 124/159 (77.99%), Query Frame = 1


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDEN   KLTGIRQIVRLKE LQ WQ VTI P S+        Q +     ++SPAINKR
Sbjct: 1   MDENNAAKLTGIRQIVRLKEILQKWQTVTIGPKSEVPPLAAGKQAV----AMISPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           L +V   DSDEE+CQSPE P DVPKG LAVYVGPELRRFIIPTSYLSHS+FKVLLEKAEE
Sbjct: 61  LLDVKNGDSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKD-HPDDHT 159
           EFGFD SG LT PCE+ETFKYLLKCME+  KD HPDD++
Sbjct: 121 EFGFDQSGALTIPCEVETFKYLLKCMENNLKDLHPDDNS 155

[Close]

BLAST of CmoCh06G000050 vs. TAIR10
Match: AT3G43120.1 (AT3G43120.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-55
Identity = 109/168 (64.88%), Postives = 125/168 (74.40%), Query Frame = 1


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDEN   KLTGI+QIVRLKE LQ WQ VTI   S     ++       +  I+SP INKR
Sbjct: 1   MDENNAAKLTGIKQIVRLKEILQKWQTVTIGSKS-----DDGELGARKHTAIISPVINKR 60

Query: 61  LTNVLCCDSDEES-CQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAE 120
           L ++  CDSDEE+ CQSPE PPDVPKGYLAVYVGPELRRFIIPT++LSHS+FKVLLEKAE
Sbjct: 61  LLDLKTCDSDEETTCQSPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAE 120

Query: 121 EEFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTME 168
           EE+GFDHSG LT PCE+ETFKYLLKC+E    +HP D T A   +  E
Sbjct: 121 EEYGFDHSGALTIPCEVETFKYLLKCIE----NHPKDDTSAEDPVETE 159

[Close]

BLAST of CmoCh06G000050 vs. TAIR10
Match: AT2G24400.1 (AT2G24400.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 98.2 bits (243), Expect = 5.1e-21
Identity = 57/146 (39.04%), Postives = 79/146 (54.11%), Query Frame = 1


Query: 8   KLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKRLTNVLCC 67
           K   IR+IV+L++ L+ W+      I+  AA+ N   N +   G  S    KR  +    
Sbjct: 5   KSNKIREIVKLQQLLKKWRK---QAIASKAANNNNEDNNSSGGGSKSIKFLKRTLSFTDV 64

Query: 68  DSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDHS 127
            +             VPKGYLAV VG E +R+ IPT YLSH  F VLL +AEEEFGF  +
Sbjct: 65  TA-------------VPKGYLAVSVGLEKKRYTIPTEYLSHQAFYVLLREAEEEFGFQQA 124

Query: 128 GGLTFPCEIETFKYLLKCMESQHKDH 154
           G L  PCE+  F+ +LK ME +++ +
Sbjct: 125 GVLRIPCEVSVFESILKIMEEKNEGY 134

[Close]

BLAST of CmoCh06G000050 vs. TAIR10
Match: AT4G31320.1 (AT4G31320.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20
Identity = 60/151 (39.74%), Postives = 84/151 (55.63%), Query Frame = 1


Query: 8   KLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKRLTNVLCC 67
           K   IR+IV+L++ L+ W+ V     +   A+ N+  N++ +N  +S  IN    N    
Sbjct: 5   KSNKIREIVKLQQILKKWRKVAH---ASKQANNNKIDNVDDSNNNISININN---NGSGS 64

Query: 68  DSDEESCQ------SPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEE 127
            S  +S +      S      +PKGYLAV VG E +R+ IPT YLSH  F VLL +AEEE
Sbjct: 65  GSGSKSIKFLKRTLSFTDTTAIPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEEE 124

Query: 128 FGFDHSGGLTFPCEIETFKYLLKCMESQHKD 153
           FGF+ +G L  PCE+  F+ +LK ME    D
Sbjct: 125 FGFEQAGILRIPCEVAVFESILKIMEDNKSD 149

[Close]

BLAST of CmoCh06G000050 vs. TAIR10
Match: AT2G18010.1 (AT2G18010.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-17
Identity = 44/109 (40.37%), Postives = 64/109 (58.72%), Query Frame = 1


Query: 35  KAAAHENQSQNLNLNNGILSPAINKRLTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGP 94
           K ++    SQ  ++   +   +  +++ NV  C  ++E     + P DVPKG+  VYVGP
Sbjct: 4   KRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQED----DLPQDVPKGHFPVYVGP 63

Query: 95  ELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDHSGGLTFPCEIETFKYLL 144
              R+I+P S+L HS F+ LL  AEEEFGFDH  GLT PC+   F+ L+
Sbjct: 64  NRSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLI 108

[Close]

BLAST of CmoCh06G000050 vs. NCBI nr
Match: gi|659121259|ref|XP_008460570.1| (PREDICTED: uncharacterized protein LOC103499361 isoform X2 [Cucumis melo])

HSP 1 Score: 317.8 bits (813), Expect = 1.2e-83
Identity = 154/167 (92.22%), Postives = 158/167 (94.61%), Query Frame = 1


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDENGGIK+ GIRQIVRLKETLQHWQGVT+ P SKAAAHEN SQN N N+GILSPAINKR
Sbjct: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNVLCCDSDEE+CQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTME 168
           EFGFDHSGGLTFPCEIETFKYLLKCMESQ KD PDDHTPA SSLTME
Sbjct: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQQKDPPDDHTPAESSLTME 166

[Close]

BLAST of CmoCh06G000050 vs. NCBI nr
Match: gi|659121257|ref|XP_008460569.1| (PREDICTED: uncharacterized protein LOC103499361 isoform X1 [Cucumis melo])

HSP 1 Score: 317.8 bits (813), Expect = 1.2e-83
Identity = 154/167 (92.22%), Postives = 158/167 (94.61%), Query Frame = 1


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDENGGIK+ GIRQIVRLKETLQHWQGVT+ P SKAAAHEN SQN N N+GILSPAINKR
Sbjct: 20  MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 79

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNVLCCDSDEE+CQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE
Sbjct: 80  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 139

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTME 168
           EFGFDHSGGLTFPCEIETFKYLLKCMESQ KD PDDHTPA SSLTME
Sbjct: 140 EFGFDHSGGLTFPCEIETFKYLLKCMESQQKDPPDDHTPAESSLTME 185

[Close]

BLAST of CmoCh06G000050 vs. NCBI nr
Match: gi|778703818|ref|XP_011655433.1| (PREDICTED: uncharacterized protein LOC101207913 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 1.3e-82
Identity = 151/167 (90.42%), Postives = 156/167 (93.41%), Query Frame = 1


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDENGGIK+ GIRQIVRLKETLQHWQGVT+ P SKAAAHEN SQN N N+GILSPAINKR
Sbjct: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNVLCCDSDEE+CQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYL HSVFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTME 168
           EFGFDHSG LTFPCEIE FKYLLKCMESQ KDHPDDHTPA SS+TME
Sbjct: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTME 166

[Close]

BLAST of CmoCh06G000050 vs. NCBI nr
Match: gi|778680864|ref|XP_011651409.1| (PREDICTED: uncharacterized protein LOC105434886 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 3.0e-79
Identity = 145/159 (91.19%), Postives = 149/159 (93.71%), Query Frame = 1


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDENGGIK+ GIRQIVRLKETLQHWQGVT+ P SKAAAHEN SQN N N+GILSPAINKR
Sbjct: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNVLCCDSDEE+CQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYL HSVFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTP 160
           EFGFDHSG LTFPCEIE FKYLLKCMESQ KDHPDDHTP
Sbjct: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTP 158

[Close]

BLAST of CmoCh06G000050 vs. NCBI nr
Match: gi|1009173188|ref|XP_015867681.1| (PREDICTED: auxin-responsive protein SAUR65-like [Ziziphus jujuba])

HSP 1 Score: 235.3 bits (599), Expect = 7.6e-59
Identity = 121/167 (72.46%), Postives = 133/167 (79.64%), Query Frame = 1


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MD+NG  KLTGIRQIVRL+E LQ WQ VT+   SK ++  N       ++G +SPAINKR
Sbjct: 1   MDDNGSSKLTGIRQIVRLRELLQKWQSVTLG--SKGSSPSNDQ-----SHGGISPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNV  CDSDEESCQSPE P DVPKGYLAVYVGPELRRFIIPTSYLSHS+FKVLLEKAEE
Sbjct: 61  LTNVTSCDSDEESCQSPEPPADVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTME 168
           EFGF+H GGLT PCEIETFKYLLKC+ES  K  P D T AGSS+  E
Sbjct: 121 EFGFNHGGGLTLPCEIETFKYLLKCIESHPKGDPVD-TSAGSSVITE 159

The following BLAST results are available for this feature:

BLAST of CmoCh06G000050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARG7_VIGRR	7.1e-17	53.62	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ...	[more]
AX15A_SOYBN	2.1e-16	57.58	Auxin-induced protein 15A OS=Glycine max PE=2 SV=1	[more]
AXX15_SOYBN	7.9e-16	56.06	Auxin-induced protein X15 OS=Glycine max PE=2 SV=1	[more]
A10A5_SOYBN	8.7e-15	64.41	Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1	[more]
AX10A_SOYBN	1.9e-14	56.06	Auxin-induced protein X10A OS=Glycine max PE=2 SV=1	[more]

BLAST of CmoCh06G000050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRA4_CUCSA	8.9e-83	90.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G534970 PE=4 SV=1	[more]
A0A0A0LB03_CUCSA	2.1e-79	91.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346940 PE=4 SV=1	[more]
A0A061GKZ7_THECC	1.2e-58	72.44	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_037470 PE=4 ...	[more]
W9RKD3_9ROSA	7.6e-58	75.16	Uncharacterized protein OS=Morus notabilis GN=L484_003321 PE=4 SV=1	[more]
A0A059CU01_EUCGR	2.2e-57	69.64	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03209 PE=4 SV=1	[more]

BLAST of CmoCh06G000050 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20810.2	3.4e-57	71.07	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	1.1e-55	64.88	SAUR-like auxin-responsive protein family	[more]
AT2G24400.1	5.1e-21	39.04	SAUR-like auxin-responsive protein family	[more]
AT4G31320.1	1.1e-20	39.74	SAUR-like auxin-responsive protein family	[more]
AT2G18010.1	3.4e-17	40.37	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh06G000050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121259\|ref\|XP_008460570.1\|	1.2e-83	92.22	PREDICTED: uncharacterized protein LOC103499361 isoform X2 [Cucumis melo]	[more]
gi\|659121257\|ref\|XP_008460569.1\|	1.2e-83	92.22	PREDICTED: uncharacterized protein LOC103499361 isoform X1 [Cucumis melo]	[more]
gi\|778703818\|ref\|XP_011655433.1\|	1.3e-82	90.42	PREDICTED: uncharacterized protein LOC101207913 [Cucumis sativus]	[more]
gi\|778680864\|ref\|XP_011651409.1\|	3.0e-79	91.19	PREDICTED: uncharacterized protein LOC105434886 [Cucumis sativus]	[more]
gi\|1009173188\|ref\|XP_015867681.1\|	7.6e-59	72.46	PREDICTED: auxin-responsive protein SAUR65-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
biological_process	GO:0016043	cellular component organization
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G000050.1	CmoCh06G000050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 69..145 score: 2.5
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 6..157 score: 4.2
None	No IPR available	PANTHER	PTHR31374:SF22	AUXIN-RESPONSIVE PROTEIN-LIKE PROTEIN-RELATED	coord: 6..157 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G000050	CmaCh06G000050	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G000050	Cp4.1LG08g13320	Cucurbita pepo (Zucchini)	cmocpeB794
CmoCh06G000050	Carg01308	Silver-seed gourd	carcmoB0227

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G000050	Cucumber (Chinese Long) v3	cmocucB0962
CmoCh06G000050	Watermelon (97103) v2	cmowmbB812
CmoCh06G000050	Wax gourd	cmowgoB0984
CmoCh06G000050	Cucumber (Gy14) v1	cgycmoB0943
CmoCh06G000050	Wild cucumber (PI 183967)	cmocpiB824
CmoCh06G000050	Cucumber (Chinese Long) v2	cmocuB816
CmoCh06G000050	Melon (DHL92) v3.5.1	cmomeB744
CmoCh06G000050	Watermelon (Charleston Gray)	cmowcgB723
CmoCh06G000050	Watermelon (97103) v1	cmowmB774
CmoCh06G000050	Bottle gourd (USVL1VR-Ls)	cmolsiB744
CmoCh06G000050	Cucumber (Gy14) v2	cgybcmoB410
CmoCh06G000050	Melon (DHL92) v3.6.1	cmomedB846