CmoCh05G008680 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G008680
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMyb-like transcription factor family protein
LocationCmo_Chr05 : 5707748 .. 5709145 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGAATAGAAAGGAAAGAAACATATATTCCCTTCCAACATAGCCTTACCCCACCAATGTCTCCTGACAACATCCGACGGACATATAAAACACGACCAAATCCCATTTTGTTCTAAACACAAACAGAATTATGCAGAATCATCACCACATCAACTTGGTTTTGTCTACTGATGCAAAGCCAAGGCTGAAATGGACTCCGGAGCTTCATCACAGATTTGAGGAGGCTGTGAATCATCTCGGTGGAGCACATAGTTCTGTTTTCTCTCTCTTCTATTACATCTTCCTTCTTTTTCCTTTTCTTTGTGTTTCATTATTTTTTGTTGGTTTGTTGCAGAGGCCACTCCTAAGAGCTTGATGAGAGCTATGGGTATCACTGGGCTAAGGCTGTACCACCTCAAGAGCCATTTACAGGTTCTTCTTCTATTCTATGCTATATCATATGATAAAAAAACGCCCATTTGTTCTTGAAAGTTAATAATGTTTGTTTATGAGGCAGAAATTTAGATTGGGAAAAAGCCACAAGTCTGAAACCATTCCCCAACTCAAGCTGGAAGGTTAATTCTCAATACAATCAATCCATCACAAAACTCTTCATTAACAATCTCTCTCACATTTAGTTACTTTTGTTCTTTAAAGACTTGAAGCAGGTGCAGATAAAAGGTGGGAAATTGGACGTGGAAAACAGCGATGTGGGTCAAAATCATAACATGAAAGAGTAAAAACCCATCTCTGTTTTGAATTTTCCTTTTGTTGTGTAGACATTGCTTTGTGTTAATATTATTTGGATCAACAATTGAAGGAGAAAGAAGATATGGGATGTTATGGAAATGCAAATGGAAGTAGAGAAGAGGCTGCAGGAGCAAGTAGAAGTACAAAGGCATTTGCAGCTGAGAATTGAAGCGCAAGGGAAGTACTTAAAGAGGGTGTTGAGGAAGGCAGAAGAGACATTTGCAGGGTACGGATGTTGTTCAGAAGCACTGGAAGAGCTCTCTCAATTGGCTTCAATGGTGAGCTCTGGATGTGAGAGCTCATGTTTGTCAGAACAGAGCAGCTCTGTTTCTGAGGGAGATTGTAAGAGACTAACAATGCAAGAAAGTAACGAGAATAATCAAGAGGAATTCAGAATGATCGACTTGAATGATGCAGCAACTGGAAGTGGAAGTGGAATTGGAAGTGGAAGTGGAAGTGGAATTGGATCAGAGTTGATTGAGTTTCTTTGAAAAGGTGGTTTTATTTTATGATGGGAATGTGTAAATGGTAGTGTTGTATATAAGGTATGTTTGATTTGGTAAGTAAGATTTGAAGGGAAACCCAATGTTAAATAAAAGAGATTGTGGGTTTATAAGCAAGCTAAAGCCATGTAAAGGTGAATCTAGAACCACAAGAATCATTCTTCTA

mRNA sequence

ATCGAATAGAAAGGAAAGAAACATATATTCCCTTCCAACATAGCCTTACCCCACCAATGTCTCCTGACAACATCCGACGGACATATAAAACACGACCAAATCCCATTTTGTTCTAAACACAAACAGAATTATGCAGAATCATCACCACATCAACTTGGTTTTGTCTACTGATGCAAAGCCAAGGCTGAAATGGACTCCGGAGCTTCATCACAGATTTGAGGAGGCTGTGAATCATCTCGGTGGAGCACATAAGGCCACTCCTAAGAGCTTGATGAGAGCTATGGGTATCACTGGGCTAAGGCTGTACCACCTCAAGAGCCATTTACAGAAATTTAGATTGGGAAAAAGCCACAAGTCTGAAACCATTCCCCAACTCAAGCTGGAAGACTTGAAGCAGGTGCAGATAAAAGGTGGGAAATTGGACGTGGAAAACAGCGATGTGGGTCAAAATCATAACATGAAAGAGAGAAAGAAGATATGGGATGTTATGGAAATGCAAATGGAAGTAGAGAAGAGGCTGCAGGAGCAAGTAGAAGTACAAAGGCATTTGCAGCTGAGAATTGAAGCGCAAGGGAAGTACTTAAAGAGGGTGTTGAGGAAGGCAGAAGAGACATTTGCAGGGTACGGATGTTGTTCAGAAGCACTGGAAGAGCTCTCTCAATTGGCTTCAATGGTGAGCTCTGGATGTGAGAGCTCATGTTTGTCAGAACAGAGCAGCTCTGTTTCTGAGGGAGATTGTAAGAGACTAACAATGCAAGAAAGTAACGAGAATAATCAAGAGGAATTCAGAATGATCGACTTGAATGATGCAGCAACTGGAAGTGGAAGTGGAATTGGAAGTGGAAGTGGAAGTGGAATTGGATCAGAGTTGATTGAGTTTCTTTGAAAAGGTGGTTTTATTTTATGATGGGAATGTGTAAATGGTAGTGTTGTATATAAGGTATGTTTGATTTGGTAAGTAAGATTTGAAGGGAAACCCAATGTTAAATAAAAGAGATTGTGGGTTTATAAGCAAGCTAAAGCCATGTAAAGGTGAATCTAGAACCACAAGAATCATTCTTCTA

Coding sequence (CDS)

ATGCAGAATCATCACCACATCAACTTGGTTTTGTCTACTGATGCAAAGCCAAGGCTGAAATGGACTCCGGAGCTTCATCACAGATTTGAGGAGGCTGTGAATCATCTCGGTGGAGCACATAAGGCCACTCCTAAGAGCTTGATGAGAGCTATGGGTATCACTGGGCTAAGGCTGTACCACCTCAAGAGCCATTTACAGAAATTTAGATTGGGAAAAAGCCACAAGTCTGAAACCATTCCCCAACTCAAGCTGGAAGACTTGAAGCAGGTGCAGATAAAAGGTGGGAAATTGGACGTGGAAAACAGCGATGTGGGTCAAAATCATAACATGAAAGAGAGAAAGAAGATATGGGATGTTATGGAAATGCAAATGGAAGTAGAGAAGAGGCTGCAGGAGCAAGTAGAAGTACAAAGGCATTTGCAGCTGAGAATTGAAGCGCAAGGGAAGTACTTAAAGAGGGTGTTGAGGAAGGCAGAAGAGACATTTGCAGGGTACGGATGTTGTTCAGAAGCACTGGAAGAGCTCTCTCAATTGGCTTCAATGGTGAGCTCTGGATGTGAGAGCTCATGTTTGTCAGAACAGAGCAGCTCTGTTTCTGAGGGAGATTGTAAGAGACTAACAATGCAAGAAAGTAACGAGAATAATCAAGAGGAATTCAGAATGATCGACTTGAATGATGCAGCAACTGGAAGTGGAAGTGGAATTGGAAGTGGAAGTGGAAGTGGAATTGGATCAGAGTTGATTGAGTTTCTTTGA
Homology
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BLAST of CmoCh05G008680 vs. Swiss-Prot
Match: PHL8_ARATH (Myb family transcription factor PHL8 OS=Arabidopsis thaliana GN=PHL8 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-44
Identity = 106/202 (52.48%), Postives = 141/202 (69.80%), Query Frame = 1 

Query: 1   MQNHH-HINLVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLY 60
           + NH   ++LVLSTDAKPRLKWT +LHH+F EAVN LGG +KATPK LM+ M I GL LY
Sbjct: 18  IDNHKAKMSLVLSTDAKPRLKWTCDLHHKFIEAVNQLGGPNKATPKGLMKVMEIPGLTLY 77

Query: 61  HLKSHLQKFRLGKSHK--SETIPQLKLEDLKQVQIKGGKLDVENSDVGQNHN--MKERKK 120
           HLKSHLQK+RLGKS K     +      + ++V+ K    D+    V + ++   KE  +
Sbjct: 78  HLKSHLQKYRLGKSMKFDDNKLEVSSASENQEVESKNDSRDLRGCSVTEENSNPAKEGLQ 137

Query: 121 IWDVMEMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE-- 180
           I + ++MQMEV+K+L EQ+EVQRHLQ++IEAQGKYL+ VL KA++T AGY   +  ++  
Sbjct: 138 ITEALQMQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMDFA 197

Query: 181 --ELSQLASMVSSGCESSCLSE 194
             ELS+LASMV+ GC S+  SE
Sbjct: 198 RTELSRLASMVNRGCPSTSFSE 219

[Close]
BLAST of CmoCh05G008680 vs. Swiss-Prot
Match: PHL9_ARATH (Myb-related protein 2 OS=Arabidopsis thaliana GN=MYR2 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.8e-39
Identity = 107/242 (44.21%), Postives = 144/242 (59.50%), Query Frame = 1 

Query: 9   LVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYHLKSHLQKF 68
           L+LSTDAKPRLKWTP+LH RF EAVN LGGA KATPK++M+ MGI GL LYHLKSHLQK+
Sbjct: 38  LILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKY 97

Query: 69  RLGKSHKSE-----------TIPQLKLEDLKQVQIKGGKLDVENSDVGQNHNMKERKKIW 128
           RL K+   +           T+ + K  D  ++Q        EN  +G   N  +   I 
Sbjct: 98  RLSKNLNGQANNSFNKIGIMTMMEEKTPDADEIQ-------SENLSIGPQPN--KNSPIG 157

Query: 129 DVMEMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE---- 188
           + ++MQ+EV++RL EQ+EVQRHLQLRIEAQGKYL+ VL KA+ET       +  +E    
Sbjct: 158 EALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAAKV 217

Query: 189 ELSQLASMVSSGCESSCL----------SEQSSSVSEGDCKRLTMQESNENNQEEFRMID 226
           +LS+L S VS+   +S            S+Q  +    DC   +   S+E  Q+  +M++
Sbjct: 218 QLSELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPPDCSLESCLTSSEGTQKNSKMLE 270

[Close]
BLAST of CmoCh05G008680 vs. Swiss-Prot
Match: PHLA_ARATH (Myb-related protein 1 OS=Arabidopsis thaliana GN=MYR1 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.8e-38
Identity = 97/193 (50.26%), Postives = 127/193 (65.80%), Query Frame = 1 

Query: 9   LVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYHLKSHLQKF 68
           L+LSTDAKPRLKWTP+LH RF EAVN LGG  KATPK++M+ MGI GL LYHLKSHLQK+
Sbjct: 38  LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKY 97

Query: 69  RLGKSHKSETIPQL-KLEDLKQVQIKGGKLDVENSD---VGQNHNMKERKKIWDVMEMQM 128
           RL K+   +    L K   +  V+    ++D  +S+   +G   +M     I D ++MQ+
Sbjct: 98  RLSKNLNGQANSSLNKTSVMTMVEENPPEVDESHSESLSIGPQPSM--NLPISDALQMQI 157

Query: 129 EVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE----ELSQLAS 188
           EV++RL EQ+EVQRHLQLRIEAQGKYL+ +L KA+ET       +  +E    +LS+L S
Sbjct: 158 EVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQETLGRQNLGAAGIEATKAQLSELVS 217

Query: 189 MVSSGCESSCLSE 194
            VS+    S   E
Sbjct: 218 KVSADYPDSSFLE 228

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BLAST of CmoCh05G008680 vs. Swiss-Prot
Match: PHL3_ARATH (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana GN=PHL3 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34
Identity = 95/214 (44.39%), Postives = 130/214 (60.75%), Query Frame = 1 

Query: 9   LVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYHLKSHLQKF 68
           LVL+TD KPRL+WT ELH RF +AV  LGG  KATPK++MR MG+ GL LYHLKSHLQKF
Sbjct: 30  LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKF 89

Query: 69  RLGKSHKSETIPQLK-LEDLKQVQIKGGKLDVENSDVGQNHNMKERKKIWDVMEMQMEVE 128
           RLG+    E+I   K +  + + Q  G           Q  N  E  ++ + +  QMEV+
Sbjct: 90  RLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLAAQEQN--ESYQVTEALRAQMEVQ 149

Query: 129 KRLQEQVEVQRHLQLRIEAQGKYLKRVLRKA----EETFAGYGCCSEALEELSQLA--SM 188
           +RL EQ+EVQR LQLRIEAQGKYL+ +L KA    EE    +     A EELS+LA  + 
Sbjct: 150 RRLHEQLEVQRRLQLRIEAQGKYLQSILEKACKAIEEQAVAFAGLEAAREELSELAIKAS 209

Query: 189 VSSGCESSCLSEQSSSVSEGDCKRLTMQESNENN 216
           +++GC+ +  +  ++ +       L +   ++NN
Sbjct: 210 ITNGCQGTTSTFDTTKMMIPSLSELAVAIEHKNN 241

[Close]
BLAST of CmoCh05G008680 vs. Swiss-Prot
Match: APL_ARATH (Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=1 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-34
Identity = 84/156 (53.85%), Postives = 106/156 (67.95%), Query Frame = 1 

Query: 9   LVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYHLKSHLQKF 68
           LVL+TD KPRL+WT ELH RF +AV  LGG  KATPK++MR MG+ GL LYHLKSHLQKF
Sbjct: 27  LVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKF 86

Query: 69  RLGKSHKSETIPQLKLEDLKQVQIKGGKLDVENSDVGQNHNMKERKKIWDVMEMQMEVEK 128
           RLGK    E       E       +   +D++  +V  +  M  R    ++ EMQMEV++
Sbjct: 87  RLGKQPHKEYGDHSTKEG-----SRASAMDIQR-NVASSSGMMSR----NMNEMQMEVQR 146

Query: 129 RLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAG 165
           RL EQ+EVQRHLQLRIEAQGKY++ +L +A +T AG
Sbjct: 147 RLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAG 172

[Close]
BLAST of CmoCh05G008680 vs. TrEMBL
Match: A0A0A0LJX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G100560 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.1e-68
Identity = 164/270 (60.74%), Postives = 187/270 (69.26%), Query Frame = 1 

Query: 1   MQNHH--HINLVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRL 60
           MQNHH  H+NLVLSTDAKPRLKWT +LH RF EAVNHLGGA KATPKSLMR MGITGL L
Sbjct: 1   MQNHHQQHMNLVLSTDAKPRLKWTHDLHQRFVEAVNHLGGADKATPKSLMRVMGITGLSL 60

Query: 61  YHLKSHLQKFRLGKSHKSETIPQLKLEDLKQVQIKGGKLD-VENSDVGQNHNMKERKKIW 120
           YHLKSHLQK+RLGKS ++ET  QLKLE++   Q KGG +D  EN D  QN N  E  KI 
Sbjct: 61  YHLKSHLQKYRLGKSQQAETNAQLKLEEM---QKKGGHIDGEENKDRTQNQNKTENMKIS 120

Query: 121 DVMEMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE---- 180
           + +EMQ++V+KRLQEQ+EVQ+HLQL+IEAQGKYLK VLRKA+ET AGYGCCSEALE    
Sbjct: 121 EALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYLKIVLRKAQETIAGYGCCSEALEEAKA 180

Query: 181 ELSQLASMVSSGCESSCLSEQSSS----------VSEGDC---KRLTMQESNE------- 231
           ELSQLASMVSSGC+SSCLSE + S          V    C     LT  E++E       
Sbjct: 181 ELSQLASMVSSGCQSSCLSELTDSTELNFKGIERVGRRMCSIESSLTSSETSEEAPITKK 240

[Close]
BLAST of CmoCh05G008680 vs. TrEMBL
Match: W9SPH9_9ROSA (Myb family transcription factor APL OS=Morus notabilis GN=L484_015664 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 7.6e-54
Identity = 134/245 (54.69%), Postives = 166/245 (67.76%), Query Frame = 1 

Query: 1   MQNHHHINLVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYH 60
           MQN + +NLVLSTDAKPRLKWTPELHHRF EAVN LGGA KATPKSLMR MGI GL LYH
Sbjct: 1   MQNQN-MNLVLSTDAKPRLKWTPELHHRFVEAVNQLGGADKATPKSLMRVMGIPGLTLYH 60

Query: 61  LKSHLQKFRLGKSHKSETIPQLKLEDLKQVQIKGGKLDVENSDVGQNHNMKERKKIWDVM 120
           LKSHLQK+RLGKS +SE     K ED K++Q   G  + E +D G    + E  KI + +
Sbjct: 61  LKSHLQKYRLGKSQQSENCSDDKQEDYKEIQGSDGHFNREIND-GSQSEINESLKIAEAL 120

Query: 121 EMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE----ELS 180
           ++QMEV+++L EQ+EVQRHLQLRIEAQGKYL+ VL+KA+ET AGY   S  +E    ELS
Sbjct: 121 QLQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYSSSSMGVEFAKTELS 180

Query: 181 QLASMVSSGCESSCLSE------------QSSSVSEGDC---KRLTMQESNENNQEEFRM 227
           +L +MV++GC+SS  SE            +  S+    C     LT  ES+   +EE R 
Sbjct: 181 RLLNMVNTGCQSSSFSELTEARELSLEVIERRSMRRTICSMESSLTSSESSGRKEEEKRP 240

[Close]
BLAST of CmoCh05G008680 vs. TrEMBL
Match: A0A0D2NCL8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G141900 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 7.1e-52
Identity = 122/197 (61.93%), Postives = 146/197 (74.11%), Query Frame = 1 

Query: 1   MQNHHHINLVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYH 60
           MQN   +NLVLSTDAKPRLKWTPELH RF EAVN LGG  KATPK+LMR +GI+GL LYH
Sbjct: 24  MQNQD-MNLVLSTDAKPRLKWTPELHQRFVEAVNQLGGPDKATPKNLMRVIGISGLTLYH 83

Query: 61  LKSHLQKFRLGKSHKSETIPQLKLEDLKQVQIKGGKLDVENSDVGQNHNMKERKKIWDVM 120
           LKSHLQKFRLGKS ++E      L+D +++Q     L  + SD G +  M E  KI   +
Sbjct: 84  LKSHLQKFRLGKSQQTEICLSDNLDDYREIQSGNKDLSSDTSD-GTHKLMNESSKIAQAL 143

Query: 121 EMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE----ELS 180
           +MQMEV+++L EQ+EVQRHLQLRIEAQGKYL+ VL+KA+ET AGY   S  +E    ELS
Sbjct: 144 QMQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYTSSSVGVELAKAELS 203

Query: 181 QLASMVSSGCESSCLSE 194
           QL SMV++GC SS LSE
Sbjct: 204 QLVSMVNTGCTSSSLSE 218

[Close]
BLAST of CmoCh05G008680 vs. TrEMBL
Match: A0A0D2RLD8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G141900 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.7e-51
Identity = 119/197 (60.41%), Postives = 144/197 (73.10%), Query Frame = 1 

Query: 1   MQNHHHINLVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYH 60
           MQN   +NLVLSTDAKPRLKWTPELH RF EAVN LGG  KATPK+LMR +GI+GL LYH
Sbjct: 24  MQNQD-MNLVLSTDAKPRLKWTPELHQRFVEAVNQLGGPDKATPKNLMRVIGISGLTLYH 83

Query: 61  LKSHLQKFRLGKSHKSETIPQLKLEDLKQVQIKGGKLDVENSDVGQNHNMKERKKIWDVM 120
           LKSHLQKFRLGKS ++E      L+D +++Q   G  D+ +      H +    KI   +
Sbjct: 84  LKSHLQKFRLGKSQQTEICLSDNLDDYREIQ--SGNKDLSSDTSDGTHKLMNDSKIAQAL 143

Query: 121 EMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE----ELS 180
           +MQMEV+++L EQ+EVQRHLQLRIEAQGKYL+ VL+KA+ET AGY   S  +E    ELS
Sbjct: 144 QMQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYTSSSVGVELAKAELS 203

Query: 181 QLASMVSSGCESSCLSE 194
           QL SMV++GC SS LSE
Sbjct: 204 QLVSMVNTGCTSSSLSE 217

[Close]
BLAST of CmoCh05G008680 vs. TrEMBL
Match: A0A0D2W0T1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G187000 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 114/194 (58.76%), Postives = 140/194 (72.16%), Query Frame = 1 

Query: 4   HHHINLVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYHLKS 63
           H ++NLVLSTD KPRLKWTP+LH RF EAVN LGGA KATPKSLMR MGI+GL LYHLKS
Sbjct: 13  HQNMNLVLSTDTKPRLKWTPQLHQRFVEAVNQLGGADKATPKSLMRIMGISGLTLYHLKS 72

Query: 64  HLQKFRLGKSHKSETIPQLKLEDLKQVQIKGGKLDVENSDVGQNHNMKERKKIWDVMEMQ 123
           HLQK+RLGK  ++E     KL+D K+++   G     N   G ++ M E  +I   ++MQ
Sbjct: 73  HLQKYRLGKFQQTEICHSNKLDDYKEIRSNNG-----NFSDGTHNQMNESLQIAQALQMQ 132

Query: 124 MEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSE----ALEELSQLA 183
           MEV+++L EQ+ VQRHLQLRIEAQGKYL+ VL+KA+ET  GY   S     A  ELS+L 
Sbjct: 133 MEVQRKLHEQIMVQRHLQLRIEAQGKYLQLVLKKAQETLVGYSSSSVGVGLAKAELSRLG 192

Query: 184 SMVSSGCESSCLSE 194
           SMV++GC SS  SE
Sbjct: 193 SMVNTGCTSSLFSE 201

[Close]
BLAST of CmoCh05G008680 vs. TAIR10
Match: AT1G69580.2 (AT1G69580.2 Homeodomain-like superfamily protein)

HSP 1 Score: 178.3 bits (451), Expect = 5.8e-45
Identity = 106/203 (52.22%), Postives = 142/203 (69.95%), Query Frame = 1 

Query: 1   MQNHH-HINLVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLY 60
           + NH   ++LVLSTDAKPRLKWT +LHH+F EAVN LGG +KATPK LM+ M I GL LY
Sbjct: 18  IDNHKAKMSLVLSTDAKPRLKWTCDLHHKFIEAVNQLGGPNKATPKGLMKVMEIPGLTLY 77

Query: 61  HLKSHLQKFRLGKSHK--SETIPQLKLEDLKQVQIKGGKLDVENSDVGQNHN--MKER-K 120
           HLKSHLQK+RLGKS K     +      + ++V+ K    D+    V + ++   K+R  
Sbjct: 78  HLKSHLQKYRLGKSMKFDDNKLEVSSASENQEVESKNDSRDLRGCSVTEENSNPAKDRGL 137

Query: 121 KIWDVMEMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE- 180
           +I + ++MQMEV+K+L EQ+EVQRHLQ++IEAQGKYL+ VL KA++T AGY   +  ++ 
Sbjct: 138 QITEALQMQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMDF 197

Query: 181 ---ELSQLASMVSSGCESSCLSE 194
              ELS+LASMV+ GC S+  SE
Sbjct: 198 ARTELSRLASMVNRGCPSTSFSE 220

[Close]
BLAST of CmoCh05G008680 vs. TAIR10
Match: AT3G04030.3 (AT3G04030.3 Homeodomain-like superfamily protein)

HSP 1 Score: 162.5 bits (410), Expect = 3.3e-40
Identity = 107/242 (44.21%), Postives = 144/242 (59.50%), Query Frame = 1 

Query: 9   LVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYHLKSHLQKF 68
           L+LSTDAKPRLKWTP+LH RF EAVN LGGA KATPK++M+ MGI GL LYHLKSHLQK+
Sbjct: 38  LILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKY 97

Query: 69  RLGKSHKSE-----------TIPQLKLEDLKQVQIKGGKLDVENSDVGQNHNMKERKKIW 128
           RL K+   +           T+ + K  D  ++Q        EN  +G   N  +   I 
Sbjct: 98  RLSKNLNGQANNSFNKIGIMTMMEEKTPDADEIQ-------SENLSIGPQPN--KNSPIG 157

Query: 129 DVMEMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE---- 188
           + ++MQ+EV++RL EQ+EVQRHLQLRIEAQGKYL+ VL KA+ET       +  +E    
Sbjct: 158 EALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAAKV 217

Query: 189 ELSQLASMVSSGCESSCL----------SEQSSSVSEGDCKRLTMQESNENNQEEFRMID 226
           +LS+L S VS+   +S            S+Q  +    DC   +   S+E  Q+  +M++
Sbjct: 218 QLSELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPPDCSLESCLTSSEGTQKNSKMLE 270

[Close]
BLAST of CmoCh05G008680 vs. TAIR10
Match: AT5G18240.1 (AT5G18240.1 myb-related protein 1)

HSP 1 Score: 159.8 bits (403), Expect = 2.1e-39
Identity = 97/193 (50.26%), Postives = 127/193 (65.80%), Query Frame = 1 

Query: 9   LVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYHLKSHLQKF 68
           L+LSTDAKPRLKWTP+LH RF EAVN LGG  KATPK++M+ MGI GL LYHLKSHLQK+
Sbjct: 38  LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKY 97

Query: 69  RLGKSHKSETIPQL-KLEDLKQVQIKGGKLDVENSD---VGQNHNMKERKKIWDVMEMQM 128
           RL K+   +    L K   +  V+    ++D  +S+   +G   +M     I D ++MQ+
Sbjct: 98  RLSKNLNGQANSSLNKTSVMTMVEENPPEVDESHSESLSIGPQPSM--NLPISDALQMQI 157

Query: 129 EVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE----ELSQLAS 188
           EV++RL EQ+EVQRHLQLRIEAQGKYL+ +L KA+ET       +  +E    +LS+L S
Sbjct: 158 EVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQETLGRQNLGAAGIEATKAQLSELVS 217

Query: 189 MVSSGCESSCLSE 194
            VS+    S   E
Sbjct: 218 KVSADYPDSSFLE 228

[Close]
BLAST of CmoCh05G008680 vs. TAIR10
Match: AT1G79430.2 (AT1G79430.2 Homeodomain-like superfamily protein)

HSP 1 Score: 146.4 bits (368), Expect = 2.4e-35
Identity = 84/156 (53.85%), Postives = 106/156 (67.95%), Query Frame = 1 

Query: 9   LVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYHLKSHLQKF 68
           LVL+TD KPRL+WT ELH RF +AV  LGG  KATPK++MR MG+ GL LYHLKSHLQKF
Sbjct: 27  LVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKF 86

Query: 69  RLGKSHKSETIPQLKLEDLKQVQIKGGKLDVENSDVGQNHNMKERKKIWDVMEMQMEVEK 128
           RLGK    E       E       +   +D++  +V  +  M  R    ++ EMQMEV++
Sbjct: 87  RLGKQPHKEYGDHSTKEG-----SRASAMDIQR-NVASSSGMMSR----NMNEMQMEVQR 146

Query: 129 RLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAG 165
           RL EQ+EVQRHLQLRIEAQGKY++ +L +A +T AG
Sbjct: 147 RLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAG 172

[Close]
BLAST of CmoCh05G008680 vs. TAIR10
Match: AT4G13640.2 (AT4G13640.2 Homeodomain-like superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 2.7e-34
Identity = 95/217 (43.78%), Postives = 130/217 (59.91%), Query Frame = 1 

Query: 9   LVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYHLKSHLQKF 68
           LVL+TD KPRL+WT ELH RF +AV  LGG  KATPK++MR MG+ GL LYHLKSHLQKF
Sbjct: 30  LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKF 89

Query: 69  RLGKSHKSETIPQLK-LEDLKQVQIKGGKLDVENSDVGQNHNMKERKKIWDVMEMQMEVE 128
           RLG+    E+I   K +  + + Q  G           Q  N  E  ++ + +  QMEV+
Sbjct: 90  RLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLAAQEQN--ESYQVTEALRAQMEVQ 149

Query: 129 KRLQEQVE---VQRHLQLRIEAQGKYLKRVLRKA----EETFAGYGCCSEALEELSQLA- 188
           +RL EQ+E   VQR LQLRIEAQGKYL+ +L KA    EE    +     A EELS+LA 
Sbjct: 150 RRLHEQLEYTQVQRRLQLRIEAQGKYLQSILEKACKAIEEQAVAFAGLEAAREELSELAI 209

Query: 189 -SMVSSGCESSCLSEQSSSVSEGDCKRLTMQESNENN 216
            + +++GC+ +  +  ++ +       L +   ++NN
Sbjct: 210 KASITNGCQGTTSTFDTTKMMIPSLSELAVAIEHKNN 244

[Close]
BLAST of CmoCh05G008680 vs. NCBI nr
Match: gi|449442291|ref|XP_004138915.1| (PREDICTED: myb family transcription factor APL [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 1.6e-68
Identity = 164/270 (60.74%), Postives = 187/270 (69.26%), Query Frame = 1 

Query: 1   MQNHH--HINLVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRL 60
           MQNHH  H+NLVLSTDAKPRLKWT +LH RF EAVNHLGGA KATPKSLMR MGITGL L
Sbjct: 1   MQNHHQQHMNLVLSTDAKPRLKWTHDLHQRFVEAVNHLGGADKATPKSLMRVMGITGLSL 60

Query: 61  YHLKSHLQKFRLGKSHKSETIPQLKLEDLKQVQIKGGKLD-VENSDVGQNHNMKERKKIW 120
           YHLKSHLQK+RLGKS ++ET  QLKLE++   Q KGG +D  EN D  QN N  E  KI 
Sbjct: 61  YHLKSHLQKYRLGKSQQAETNAQLKLEEM---QKKGGHIDGEENKDRTQNQNKTENMKIS 120

Query: 121 DVMEMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE---- 180
           + +EMQ++V+KRLQEQ+EVQ+HLQL+IEAQGKYLK VLRKA+ET AGYGCCSEALE    
Sbjct: 121 EALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYLKIVLRKAQETIAGYGCCSEALEEAKA 180

Query: 181 ELSQLASMVSSGCESSCLSEQSSS----------VSEGDC---KRLTMQESNE------- 231
           ELSQLASMVSSGC+SSCLSE + S          V    C     LT  E++E       
Sbjct: 181 ELSQLASMVSSGCQSSCLSELTDSTELNFKGIERVGRRMCSIESSLTSSETSEEAPITKK 240

[Close]
BLAST of CmoCh05G008680 vs. NCBI nr
Match: gi|659082189|ref|XP_008441712.1| (PREDICTED: myb family transcription factor APL [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 4.7e-65
Identity = 165/287 (57.49%), Postives = 189/287 (65.85%), Query Frame = 1 

Query: 1   MQNHHH------INLVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGIT 60
           MQNHHH      +NLVLSTDAKPRLKWT ELH RF EAVN+LGGA KATPKSLMR MGIT
Sbjct: 1   MQNHHHHQQQPHMNLVLSTDAKPRLKWTHELHQRFVEAVNYLGGADKATPKSLMRVMGIT 60

Query: 61  GLRLYHLKSHLQKFRLGKSHKSETIPQLKLEDLKQVQIKGGKLD-VENSDVGQNHNMKER 120
           GL LYHLKSHLQK+RLGKS ++ET  Q+KL+++   Q K G  D  EN D  QN N  E 
Sbjct: 61  GLSLYHLKSHLQKYRLGKSQQAETNAQVKLQEM---QKKSGHFDGEENKDRTQNQNKTEN 120

Query: 121 KKIWDVMEMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE 180
            KI + +EMQ++V+KRLQEQ+EVQ+HLQL+IEAQGKYLK VLRKA+ET AGYGCCSEALE
Sbjct: 121 MKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYLKIVLRKAQETIAGYGCCSEALE 180

Query: 181 ----ELSQLASMVSSGCESSCLSE----------------------------QSSSVSE- 234
               ELSQLASMVSSGC+SSCLSE                             SS  SE 
Sbjct: 181 EAKAELSQLASMVSSGCQSSCLSELTDSTELSFKGTERVGSGRRMCSIESSLTSSETSEE 240

[Close]
BLAST of CmoCh05G008680 vs. NCBI nr
Match: gi|703146000|ref|XP_010108678.1| (Myb family transcription factor APL [Morus notabilis])

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 134/245 (54.69%), Postives = 166/245 (67.76%), Query Frame = 1 

Query: 1   MQNHHHINLVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYH 60
           MQN + +NLVLSTDAKPRLKWTPELHHRF EAVN LGGA KATPKSLMR MGI GL LYH
Sbjct: 1   MQNQN-MNLVLSTDAKPRLKWTPELHHRFVEAVNQLGGADKATPKSLMRVMGIPGLTLYH 60

Query: 61  LKSHLQKFRLGKSHKSETIPQLKLEDLKQVQIKGGKLDVENSDVGQNHNMKERKKIWDVM 120
           LKSHLQK+RLGKS +SE     K ED K++Q   G  + E +D G    + E  KI + +
Sbjct: 61  LKSHLQKYRLGKSQQSENCSDDKQEDYKEIQGSDGHFNREIND-GSQSEINESLKIAEAL 120

Query: 121 EMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE----ELS 180
           ++QMEV+++L EQ+EVQRHLQLRIEAQGKYL+ VL+KA+ET AGY   S  +E    ELS
Sbjct: 121 QLQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYSSSSMGVEFAKTELS 180

Query: 181 QLASMVSSGCESSCLSE------------QSSSVSEGDC---KRLTMQESNENNQEEFRM 227
           +L +MV++GC+SS  SE            +  S+    C     LT  ES+   +EE R 
Sbjct: 181 RLLNMVNTGCQSSSFSELTEARELSLEVIERRSMRRTICSMESSLTSSESSGRKEEEKRP 240

[Close]
BLAST of CmoCh05G008680 vs. NCBI nr
Match: gi|645229747|ref|XP_008221605.1| (PREDICTED: uncharacterized protein LOC103321568 [Prunus mume])

HSP 1 Score: 212.6 bits (540), Expect = 7.8e-52
Identity = 121/198 (61.11%), Postives = 148/198 (74.75%), Query Frame = 1 

Query: 1   MQNHHHINLVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYH 60
           MQN + +NLVLSTDAKPRLKWTPELH RF EAVN LGGA KATPKSLMR MGI GL LYH
Sbjct: 7   MQNQN-MNLVLSTDAKPRLKWTPELHQRFVEAVNQLGGADKATPKSLMRVMGIHGLTLYH 66

Query: 61  LKSHLQKFRLGKSHKSETIPQLKLEDLKQVQIKGGKLDVENSDVGQNH-NMKERKKIWDV 120
           LKSHLQK+RLGKS +SE    +K ED K++Q      D + SD  + H  + E  +I + 
Sbjct: 67  LKSHLQKYRLGKSQQSENCTDVKQEDYKEIQSSDDHFDTDISD--ETHCQINESLQIAES 126

Query: 121 MEMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE----EL 180
           +++QMEV+++L EQ+EVQRHLQLRIEAQGKYL+ VL+KA+ET +GY   S  +E    EL
Sbjct: 127 LQLQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQTVLKKAQETLSGYSSSSVGVELAKAEL 186

Query: 181 SQLASMVSSGCESSCLSE 194
           +QL SMV++GC SS  SE
Sbjct: 187 TQLVSMVNNGCPSSSFSE 201

[Close]
BLAST of CmoCh05G008680 vs. NCBI nr
Match: gi|823157641|ref|XP_012478701.1| (PREDICTED: uncharacterized protein LOC105794201 isoform X1 [Gossypium raimondii])

HSP 1 Score: 212.2 bits (539), Expect = 1.0e-51
Identity = 122/197 (61.93%), Postives = 146/197 (74.11%), Query Frame = 1 

Query: 1   MQNHHHINLVLSTDAKPRLKWTPELHHRFEEAVNHLGGAHKATPKSLMRAMGITGLRLYH 60
           MQN   +NLVLSTDAKPRLKWTPELH RF EAVN LGG  KATPK+LMR +GI+GL LYH
Sbjct: 24  MQNQD-MNLVLSTDAKPRLKWTPELHQRFVEAVNQLGGPDKATPKNLMRVIGISGLTLYH 83

Query: 61  LKSHLQKFRLGKSHKSETIPQLKLEDLKQVQIKGGKLDVENSDVGQNHNMKERKKIWDVM 120
           LKSHLQKFRLGKS ++E      L+D +++Q     L  + SD G +  M E  KI   +
Sbjct: 84  LKSHLQKFRLGKSQQTEICLSDNLDDYREIQSGNKDLSSDTSD-GTHKLMNESSKIAQAL 143

Query: 121 EMQMEVEKRLQEQVEVQRHLQLRIEAQGKYLKRVLRKAEETFAGYGCCSEALE----ELS 180
           +MQMEV+++L EQ+EVQRHLQLRIEAQGKYL+ VL+KA+ET AGY   S  +E    ELS
Sbjct: 144 QMQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYTSSSVGVELAKAELS 203

Query: 181 QLASMVSSGCESSCLSE 194
           QL SMV++GC SS LSE
Sbjct: 204 QLVSMVNTGCTSSSLSE 218

The following BLAST results are available for this feature:
BLAST of CmoCh05G008680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PHL8_ARATH1.2e-4452.48Myb family transcription factor PHL8 OS=Arabidopsis thaliana GN=PHL8 PE=2 SV=1[more]
PHL9_ARATH5.8e-3944.21Myb-related protein 2 OS=Arabidopsis thaliana GN=MYR2 PE=1 SV=1[more]
PHLA_ARATH3.8e-3850.26Myb-related protein 1 OS=Arabidopsis thaliana GN=MYR1 PE=1 SV=1[more]
PHL3_ARATH1.1e-3444.39Protein PHR1-LIKE 3 OS=Arabidopsis thaliana GN=PHL3 PE=1 SV=1[more]
APL_ARATH4.3e-3453.85Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=1 SV=2[more]
BLAST of CmoCh05G008680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJX4_CUCSA1.1e-6860.74Uncharacterized protein OS=Cucumis sativus GN=Csa_2G100560 PE=4 SV=1[more]
W9SPH9_9ROSA7.6e-5454.69Myb family transcription factor APL OS=Morus notabilis GN=L484_015664 PE=4 SV=1[more]
A0A0D2NCL8_GOSRA7.1e-5261.93Uncharacterized protein OS=Gossypium raimondii GN=B456_005G141900 PE=4 SV=1[more]
A0A0D2RLD8_GOSRA2.7e-5160.41Uncharacterized protein OS=Gossypium raimondii GN=B456_005G141900 PE=4 SV=1[more]
A0A0D2W0T1_GOSRA2.5e-4958.76Uncharacterized protein OS=Gossypium raimondii GN=B456_012G187000 PE=4 SV=1[more]
BLAST of CmoCh05G008680 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69580.25.8e-4552.22 Homeodomain-like superfamily protein[more]
AT3G04030.33.3e-4044.21 Homeodomain-like superfamily protein[more]
AT5G18240.12.1e-3950.26 myb-related protein 1[more]
AT1G79430.22.4e-3553.85 Homeodomain-like superfamily protein[more]
AT4G13640.22.7e-3443.78 Homeodomain-like superfamily protein[more]
BLAST of CmoCh05G008680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442291|ref|XP_004138915.1|1.6e-6860.74PREDICTED: myb family transcription factor APL [Cucumis sativus][more]
gi|659082189|ref|XP_008441712.1|4.7e-6557.49PREDICTED: myb family transcription factor APL [Cucumis melo][more]
gi|703146000|ref|XP_010108678.1|1.1e-5354.69Myb family transcription factor APL [Morus notabilis][more]
gi|645229747|ref|XP_008221605.1|7.8e-5261.11PREDICTED: uncharacterized protein LOC103321568 [Prunus mume][more]
gi|823157641|ref|XP_012478701.1|1.0e-5161.93PREDICTED: uncharacterized protein LOC105794201 isoform X1 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR009057Homeobox-like_sf
IPR025756Myb_CC_LHEQLE
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0050794 regulation of cellular process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G008680.1CmoCh05G008680.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 18..68
score: 3.
IPR006447Myb domain, plantsTIGRFAMsTIGR01557TIGR01557coord: 16..71
score: 7.1
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 14..71
score: 2.2
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 15..71
score: 2.51
IPR025756MYB-CC type transcription factor, LHEQLE-containing domainPFAMPF14379Myb_CC_LHEQLEcoord: 118..161
score: 2.8
NoneNo IPR availablePANTHERPTHR31499FAMILY NOT NAMEDcoord: 7..213
score: 1.1
NoneNo IPR availablePANTHERPTHR31499:SF11HOMEODOMAIN-LIKE SUPERFAMILY PROTEINcoord: 7..213
score: 1.1