CmoCh05G005370 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G005370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Histone H3
Location	Cmo_Chr05 : 2598543 .. 2599708 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTTGAAAGAAATCCCTATCTATCCGAGGACGAAAATTCTCTCTCGCTTGTCAAGCTCCTCCTCTTCTTCCAGGTTAGTTCATCGTCGTCTCGTTTATCTGACTTATTTTCTTGTGATTGATTAGTATTATTCGGTTTTCCTTTCAATTTCATTCCTGGAGGATATGGTTAATCTTCTTCTCGAATTCTTTCTAGTCGAATGTTGTTTATGCGGTTAGGGTTAGTTTTTCTTCTGGAATTTATTTCTCGAACTTTGAGATTTGTTGATAACTAATCTTTAGAAACCTCTACAAAGTCGAAGAACTTGTGCTGTTATCCGTGAAAAGTTTAGGAGAGGAATGGGGAGAAGTAGGTCAAATAATCAAATAATCTCATATTCGCAGGCTAAATGCTGGTTAAGTTTACTAGGTACTTCTAATTTATAGGTTTCTGGAACAATCGTCAGATACACCTGTTCATTCTAATTTAGAAACAGAGACGCACTTTACATTGGAATTATCTTAGCGATCTGTTTTGTTTTGATTGAGCGACGATATTTAATTCGCACGACATTGATTCAGATGGCTCGTACGAAGCAAACTGCTCGCAAATCCACAGGTGGAAAGGCTCCCAGAAAGCAGCTTGCTACCAAGGTATTTTCCAGGATGATTGCCAGCAACCTAGTTCTAAATTCTCATTTGTTTCCTGACCTAATGTGTTGTAAATCTGACCAATATTTTCCCAGGCTGCGCGTAAGTCGGCACCCACTACTGGAGGCGTGAAGAAACCGCACAGATACCGCCCAGGAACAGTTGCTCTTCGGTATGTTACCACATCTGTTCTTTACTTTACGCATTCGAAAAAATCAATCATGGTTTCTCGTTTACATGAATCTTATGCCCTCTGTAATGTATGTGATACAGAGAAATCCGCAAGTACCAGAAGAGTACTGAGCTTCTTATCCGCAAGCTTCCATTCCAGAGGCTTGTCCGTGAAATCGCACAAGATTTCAAGACAGATCTGCGTTTCCAGAGCCACGCGGTTTTGGCTTTGCAAGAGGCGGCTGAAGCTTACCTCGTTGGGCTGTTTGAAGATACCAATCTCTGCGCCATTCATGCCAAGCGTGTTACAATAATGCCGAAAGATATTCAACTTGCCAGAAGAATCCGTGGTGAAAGAGCTTAA

mRNA sequence

TATTTTGAAAGAAATCCCTATCTATCCGAGGACGAAAATTCTCTCTCGCTTGTCAAGCTCCTCCTCTTCTTCCAGATGGCTCGTACGAAGCAAACTGCTCGCAAATCCACAGGTGGAAAGGCTCCCAGAAAGCAGCTTGCTACCAAGGCTGCGCGTAAGTCGGCACCCACTACTGGAGGCGTGAAGAAACCGCACAGATACCGCCCAGGAACAGTTGCTCTTCGAGAAATCCGCAAGTACCAGAAGAGTACTGAGCTTCTTATCCGCAAGCTTCCATTCCAGAGGCTTGTCCGTGAAATCGCACAAGATTTCAAGACAGATCTGCGTTTCCAGAGCCACGCGGTTTTGGCTTTGCAAGAGGCGGCTGAAGCTTACCTCGTTGGGCTGTTTGAAGATACCAATCTCTGCGCCATTCATGCCAAGCGTGTTACAATAATGCCGAAAGATATTCAACTTGCCAGAAGAATCCGTGGTGAAAGAGCTTAA

Coding sequence (CDS)

ATGGCTCGTACGAAGCAAACTGCTCGCAAATCCACAGGTGGAAAGGCTCCCAGAAAGCAGCTTGCTACCAAGGCTGCGCGTAAGTCGGCACCCACTACTGGAGGCGTGAAGAAACCGCACAGATACCGCCCAGGAACAGTTGCTCTTCGAGAAATCCGCAAGTACCAGAAGAGTACTGAGCTTCTTATCCGCAAGCTTCCATTCCAGAGGCTTGTCCGTGAAATCGCACAAGATTTCAAGACAGATCTGCGTTTCCAGAGCCACGCGGTTTTGGCTTTGCAAGAGGCGGCTGAAGCTTACCTCGTTGGGCTGTTTGAAGATACCAATCTCTGCGCCATTCATGCCAAGCGTGTTACAATAATGCCGAAAGATATTCAACTTGCCAGAAGAATCCGTGGTGAAAGAGCTTAA

Homology

[Close]

BLAST of CmoCh05G005370 vs. Swiss-Prot
Match: H33_MEDSA (Histone H3.3 OS=Medicago sativa PE=1 SV=2)

HSP 1 Score: 256.1 bits (653), Expect = 2.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. Swiss-Prot
Match: H33_LOLMU (Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=3)

HSP 1 Score: 256.1 bits (653), Expect = 2.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. Swiss-Prot
Match: H33_GOSHI (Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV=3)

HSP 1 Score: 256.1 bits (653), Expect = 2.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. Swiss-Prot
Match: H33_VITVI (Histone H3.3 OS=Vitis vinifera PE=2 SV=3)

HSP 1 Score: 256.1 bits (653), Expect = 2.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. Swiss-Prot
Match: H33_TOBAC (Histone H3.3 OS=Nicotiana tabacum GN=H3 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. TrEMBL
Match: A0A0B2EVW9_9BACL (Uncharacterized protein OS=Paenibacillus sp. IHB B 3415 GN=QW71_36435 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-65
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. TrEMBL
Match: A0A0V0RDG7_9BILA (Histone H3 OS=Trichinella nelsoni GN=T07_6184 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-65
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. TrEMBL
Match: K3YVI8_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_018284mg PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-65
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 89  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 148

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 149 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 208

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 209 MPKDIQLARRIRGERA 224

[Close]

BLAST of CmoCh05G005370 vs. TrEMBL
Match: B9DGR9_ARATH (Histone H3 OS=Arabidopsis thaliana GN=At4g40030 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-65
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. TrEMBL
Match: B8AUE9_ORYSI (Histone H3 OS=Oryza sativa subsp. indica GN=OsI_16104 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-65
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. TAIR10
Match: AT4G40040.1 (AT4G40040.1 Histone superfamily protein)

HSP 1 Score: 256.1 bits (653), Expect = 1.2e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. TAIR10
Match: AT4G40030.2 (AT4G40030.2 Histone superfamily protein)

HSP 1 Score: 256.1 bits (653), Expect = 1.2e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 29  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 88

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 89  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 148

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 149 MPKDIQLARRIRGERA 164

[Close]

BLAST of CmoCh05G005370 vs. TAIR10
Match: AT5G10980.1 (AT5G10980.1 Histone superfamily protein)

HSP 1 Score: 256.1 bits (653), Expect = 1.2e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. TAIR10
Match: AT1G09200.1 (AT1G09200.1 Histone superfamily protein)

HSP 1 Score: 247.3 bits (630), Expect = 5.5e-66
Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. TAIR10
Match: AT3G27360.1 (AT3G27360.1 Histone superfamily protein)

HSP 1 Score: 247.3 bits (630), Expect = 5.5e-66
Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. NCBI nr
Match: gi|145334271|ref|NP_001078516.1| (Histone H3.3 [Arabidopsis thaliana])

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-65
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 29  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 88

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 89  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 148

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 149 MPKDIQLARRIRGERA 164

[Close]

BLAST of CmoCh05G005370 vs. NCBI nr
Match: gi|944244832|gb|KQL09126.1| (hypothetical protein SETIT_007379mg [Setaria italica])

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-65
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 37  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 96

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 97  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 156

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 157 MPKDIQLARRIRGERA 172

[Close]

BLAST of CmoCh05G005370 vs. NCBI nr
Match: gi|413937382|gb|AFW71933.1| (histone H3, partial [Zea mays])

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-65
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmoCh05G005370 vs. NCBI nr
Match: gi|937921062|dbj|BAS95979.1| (Os06g0130900, partial [Oryza sativa Japonica Group])

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-65
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 34  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 93

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 94  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 153

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 154 MPKDIQLARRIRGERA 169

[Close]

BLAST of CmoCh05G005370 vs. NCBI nr
Match: gi|604319816|gb|EYU30980.1| (hypothetical protein MIMGU_mgv1a014700mg [Erythranthe guttata])

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-65
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 46  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 105

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 106 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 165

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 166 MPKDIQLARRIRGERA 181

The following BLAST results are available for this feature:

BLAST of CmoCh05G005370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
H33_MEDSA	2.1e-67	100.00	Histone H3.3 OS=Medicago sativa PE=1 SV=2	[more]
H33_LOLMU	2.1e-67	100.00	Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=3	[more]
H33_GOSHI	2.1e-67	100.00	Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV=3	[more]
H33_VITVI	2.1e-67	100.00	Histone H3.3 OS=Vitis vinifera PE=2 SV=3	[more]
H33_TOBAC	2.1e-67	100.00	Histone H3.3 OS=Nicotiana tabacum GN=H3 PE=1 SV=1	[more]

BLAST of CmoCh05G005370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0B2EVW9_9BACL	2.3e-65	100.00	Uncharacterized protein OS=Paenibacillus sp. IHB B 3415 GN=QW71_36435 PE=4 SV=1	[more]
A0A0V0RDG7_9BILA	2.3e-65	100.00	Histone H3 OS=Trichinella nelsoni GN=T07_6184 PE=3 SV=1	[more]
K3YVI8_SETIT	2.3e-65	100.00	Uncharacterized protein OS=Setaria italica GN=SETIT_018284mg PE=3 SV=1	[more]
B9DGR9_ARATH	2.3e-65	100.00	Histone H3 OS=Arabidopsis thaliana GN=At4g40030 PE=2 SV=1	[more]
B8AUE9_ORYSI	2.3e-65	100.00	Histone H3 OS=Oryza sativa subsp. indica GN=OsI_16104 PE=3 SV=1	[more]

BLAST of CmoCh05G005370 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G40040.1	1.2e-68	100.00	Histone superfamily protein	[more]
AT4G40030.2	1.2e-68	100.00	Histone superfamily protein	[more]
AT5G10980.1	1.2e-68	100.00	Histone superfamily protein	[more]
AT1G09200.1	5.5e-66	97.06	Histone superfamily protein	[more]
AT3G27360.1	5.5e-66	97.06	Histone superfamily protein	[more]

BLAST of CmoCh05G005370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|145334271\|ref\|NP_001078516.1\|	3.3e-65	100.00	Histone H3.3 [Arabidopsis thaliana]	[more]
gi\|944244832\|gb\|KQL09126.1\|	3.3e-65	100.00	hypothetical protein SETIT_007379mg [Setaria italica]	[more]
gi\|413937382\|gb\|AFW71933.1\|	3.3e-65	100.00	histone H3, partial [Zea mays]	[more]
gi\|937921062\|dbj\|BAS95979.1\|	3.3e-65	100.00	Os06g0130900, partial [Oryza sativa Japonica Group]	[more]
gi\|604319816\|gb\|EYU30980.1\|	3.3e-65	100.00	hypothetical protein MIMGU_mgv1a014700mg [Erythranthe guttata]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006007	glucose catabolic process
biological_process	GO:0006605	protein targeting
biological_process	GO:0008150	biological_process
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030875	rDNA protrusion
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G005370.1	CmoCh05G005370.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G005370	Cucsa.160200	Cucumber (Gy14) v1	cgycmoB0461
CmoCh05G005370	Cla022112	Watermelon (97103) v1	cmowmB746
CmoCh05G005370	Csa2G369110	Cucumber (Chinese Long) v2	cmocuB778
CmoCh05G005370	MELO3C011045	Melon (DHL92) v3.5.1	cmomeB719
CmoCh05G005370	CSPI02G21190	Wild cucumber (PI 183967)	cmocpiB783
CmoCh05G005370	Cp4.1LG07g01510	Cucurbita pepo (Zucchini)	cmocpeB744
CmoCh05G005370	Cp4.1LG11g04490	Cucurbita pepo (Zucchini)	cmocpeB720
CmoCh05G005370	MELO3C011045.2	Melon (DHL92) v3.6.1	cmomedB816
CmoCh05G005370	CsaV3_2G029860	Cucumber (Chinese Long) v3	cmocucB0919
CmoCh05G005370	Cla97C08G154270	Watermelon (97103) v2	cmowmbB800
CmoCh05G005370	Bhi04G000644	Wax gourd	cmowgoB0937
CmoCh05G005370	CsGy2G020930	Cucumber (Gy14) v2	cgybcmoB239
CmoCh05G005370	Carg20528	Silver-seed gourd	carcmoB0894
CmoCh05G005370	Carg08201	Silver-seed gourd	carcmoB0087

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh05G005370	CmoCh12G001310	Cucurbita moschata (Rifu)	cmocmoB150

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G005370	Cucumber (Chinese Long) v3	cmocucB0929
CmoCh05G005370	Cucumber (Chinese Long) v3	cmocucB0942
CmoCh05G005370	Watermelon (97103) v2	cmowmbB775
CmoCh05G005370	Watermelon (97103) v2	cmowmbB779
CmoCh05G005370	Wax gourd	cmowgoB0954
CmoCh05G005370	Wax gourd	cmowgoB0961
CmoCh05G005370	Cucurbita moschata (Rifu)	cmocmoB031
CmoCh05G005370	Cucurbita moschata (Rifu)	cmocmoB370
CmoCh05G005370	Cucurbita moschata (Rifu)	cmocmoB452
CmoCh05G005370	Cucumber (Gy14) v1	cgycmoB0230
CmoCh05G005370	Cucumber (Gy14) v1	cgycmoB0872
CmoCh05G005370	Cucurbita maxima (Rimu)	cmacmoB060
CmoCh05G005370	Cucurbita maxima (Rimu)	cmacmoB192
CmoCh05G005370	Cucurbita maxima (Rimu)	cmacmoB484
CmoCh05G005370	Cucurbita maxima (Rimu)	cmacmoB661
CmoCh05G005370	Cucurbita maxima (Rimu)	cmacmoB786
CmoCh05G005370	Wild cucumber (PI 183967)	cmocpiB792
CmoCh05G005370	Wild cucumber (PI 183967)	cmocpiB804
CmoCh05G005370	Cucumber (Chinese Long) v2	cmocuB789
CmoCh05G005370	Cucumber (Chinese Long) v2	cmocuB799
CmoCh05G005370	Melon (DHL92) v3.5.1	cmomeB722
CmoCh05G005370	Melon (DHL92) v3.5.1	cmomeB733
CmoCh05G005370	Watermelon (Charleston Gray)	cmowcgB691
CmoCh05G005370	Watermelon (Charleston Gray)	cmowcgB698
CmoCh05G005370	Watermelon (Charleston Gray)	cmowcgB713
CmoCh05G005370	Watermelon (97103) v1	cmowmB755
CmoCh05G005370	Watermelon (97103) v1	cmowmB761
CmoCh05G005370	Cucurbita pepo (Zucchini)	cmocpeB719
CmoCh05G005370	Cucurbita pepo (Zucchini)	cmocpeB735
CmoCh05G005370	Cucurbita pepo (Zucchini)	cmocpeB739
CmoCh05G005370	Bottle gourd (USVL1VR-Ls)	cmolsiB707
CmoCh05G005370	Bottle gourd (USVL1VR-Ls)	cmolsiB718
CmoCh05G005370	Bottle gourd (USVL1VR-Ls)	cmolsiB728
CmoCh05G005370	Cucumber (Gy14) v2	cgybcmoB398
CmoCh05G005370	Cucumber (Gy14) v2	cgybcmoB829
CmoCh05G005370	Melon (DHL92) v3.6.1	cmomedB820
CmoCh05G005370	Melon (DHL92) v3.6.1	cmomedB830
CmoCh05G005370	Silver-seed gourd	carcmoB0552
CmoCh05G005370	Silver-seed gourd	carcmoB0877