CmoCh05G003600 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G003600
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Ccr4-associated factor, putative) (3.1.13.4)
LocationCmo_Chr05 : 1630147 .. 1630971 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAACTTGGAGGCAGAGTTTGCTTTAATACGTGAAGTCGTCGACCAATTCAACTACATAGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATTTGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAAGATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTCATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAACTGTTGACTTGCCAAATCTTACCAGACACCCAGGAGGAGTTTTTTTATTTGATCCGTACGTATTTCCCAATGGTTTATGATGTCAAGCATTTGTTGAAGTTTTGCAACAGTATCTATGGTGGGCTCAGCAAGGTTGCAGAAACATTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAAATATGCCGGTGTTTTATATGGTCTCGGTGTCGAAAATGAACCGACTACTGATTGA

mRNA sequence

ATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAACTTGGAGGCAGAGTTTGCTTTAATACGTGAAGTCGTCGACCAATTCAACTACATAGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATTTGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAAGATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTCATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAACTGTTGACTTGCCAAATCTTACCAGACACCCAGGAGGAGTTTTTTTATTTGATCCGTACGTATTTCCCAATGGTTTATGATGTCAAGCATTTGTTGAAGTTTTGCAACAGTATCTATGGTGGGCTCAGCAAGGTTGCAGAAACATTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAAATATGCCGGTGTTTTATATGGTCTCGGTGTCGAAAATGAACCGACTACTGATTGA

Coding sequence (CDS)

ATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAACTTGGAGGCAGAGTTTGCTTTAATACGTGAAGTCGTCGACCAATTCAACTACATAGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATTTGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAAGATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTCATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAACTGTTGACTTGCCAAATCTTACCAGACACCCAGGAGGAGTTTTTTTATTTGATCCGTACGTATTTCCCAATGGTTTATGATGTCAAGCATTTGTTGAAGTTTTGCAACAGTATCTATGGTGGGCTCAGCAAGGTTGCAGAAACATTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAAATATGCCGGTGTTTTATATGGTCTCGGTGTCGAAAATGAACCGACTACTGATTGA
Homology
[Close]
BLAST of CmoCh05G003600 vs. Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 428.7 bits (1101), Expect = 4.8e-119
Identity = 201/270 (74.44%), Postives = 235/270 (87.04%), Query Frame = 1 

Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS F K +SI IREVWN NLE+E ALIREVVD F ++AMDTEFPG+V RPVGTFK   E+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTD-KYCIWQFNFREFNITEDIYATDSIQ 120
           +Y TLK NV+IL +IQLGLTFS+E GNLPTCGTD KYCIWQFNFREF++  DIYATDSI+
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQIL 180
           LLR SGIDF KN E GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PDTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLT 240
           P+TQ  FF +I  YFP VYD+KHL+KFCNS++GGL+K+AE L++ERVG+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFSGSTQKYAGVLYGLGVEN 270
           +CTFRKL++ FF GS +KY+GVLYGLGVEN
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVEN 270

[Close]
BLAST of CmoCh05G003600 vs. Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 9.9e-117
Identity = 194/269 (72.12%), Postives = 231/269 (85.87%), Query Frame = 1 

Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS F K +SI IREVWN NL+ E  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           +Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQFNFREF++  DI+A DSI+L
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           L+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           D+Q +FF LI  YFP VYD+KHL+KFCNS++GGL+K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVEN 270
           CTFRKL++ FF G   KY+GVLYGLGVEN
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVEN 269

[Close]
BLAST of CmoCh05G003600 vs. Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 1.9e-115
Identity = 192/268 (71.64%), Postives = 232/268 (86.57%), Query Frame = 1 

Query: 6   KAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTL 65
           K +SI IREVW++NL  EFALIRE+VD+F+YIAMDTEFPGVVL+PV TFK  N+ NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSG 125
           K+NVD+L LIQ+GLTFS+ENGNLPTCGTDK+CIWQFNFREFNI EDIYA++SI+LLR  G
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEE 185
           IDFKKN E+GIDV RF EL+MSSGIVLND++ WVTFH GYDFGYL+KLLTC+ LP  Q +
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRK 245
           FF L+  YFP VYD+KHL+ FCN ++GGL+++AE + +ERVG+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFSGSTQKYAGVLYGLGVENEPTT 274
           L++ +F GST+KY GVLYGLGVE+  TT
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]
BLAST of CmoCh05G003600 vs. Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.3e-92
Identity = 159/264 (60.23%), Postives = 204/264 (77.27%), Query Frame = 1 

Query: 8   ESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNIN------EFN 67
           ++I IREVWNHNLE E ALI + +D F Y+AMDTEFPG+V + V    N N      E+N
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLL 127
           Y TLK NV++L LIQLGLT S+E GNLPTCGT+K CIWQFNFREFN+  D++A DSI+LL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPD 187
           R S ID +KN E G+D +RF+ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP+
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 TQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTAC 247
              +FF  +  +FP+VYD+K+L+ FC ++YGGL K+AE L ++RVG+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFSGSTQKYAGVLYGL 266
           TF K+++ FF+GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]
BLAST of CmoCh05G003600 vs. Swiss-Prot
Match: CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 2.4e-78
Identity = 146/257 (56.81%), Postives = 189/257 (73.54%), Query Frame = 1 

Query: 12  IREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDI 71
           I EVW  NLE E   IR+V  +FNYIAMDTEFPGVV RP+G F++  ++ Y+ L+ NVD+
Sbjct: 12  ICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71

Query: 72  LNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSGIDFKKN 131
           L +IQLGLTF  E G  P  GT     WQFNF+ FN+TED+YA DSI+LL  SGI FKK+
Sbjct: 72  LKIIQLGLTFMNEQGEYPP-GTST---WQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKH 131

Query: 132 KEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIR 191
           +EEGI+   F+ELLM+SG+VL + V W++FHSGYDFGYL+K+L+   LPD + +FF ++R
Sbjct: 132 EEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEILR 191

Query: 192 TYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFF 251
            +FP++YDVK+L+K C ++ GGL +VAE LE+ER+G  HQAGSDSLLT   F K+R+ FF
Sbjct: 192 LFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFF 251

Query: 252 SG--STQKYAGVLYGLG 267
                  KY G LYGLG
Sbjct: 252 EDHIDDAKYCGHLYGLG 263

[Close]
BLAST of CmoCh05G003600 vs. TrEMBL
Match: B9RNX3_RICCO (Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0921770 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 5.8e-132
Identity = 220/273 (80.59%), Postives = 249/273 (91.21%), Query Frame = 1 

Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS  PK +SI+IREVWN NLE EF LIRE+VDQFNY+AMDTEFPGVVLRPVG FKNIN++
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+L
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           LR  GIDFKKN E+GIDV RF EL+MSSGIVLND V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           DTQ  FF LI TYFPMVYD+KHL+KFCNS++GGL+K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTT 274
           CTFRKLRD FF+GST+KYAGVLYGLGVEN   T
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVENGQNT 273

[Close]
BLAST of CmoCh05G003600 vs. TrEMBL
Match: A0A0A0LSM4_CUCSA (Ccr4-associated factor OS=Cucumis sativus GN=Csa_2G382590 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 1.7e-131
Identity = 221/274 (80.66%), Postives = 250/274 (91.24%), Query Frame = 1 

Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS  PK ESI IREVWN NLE EFALIR++VDQFNYIAMDTEFPGVV+RPVG+FKNINE+
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           NYRTL++NVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI +DIYA+DSI+L
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           LR+ GIDF+K  EEGIDV RF ELLMSSGIVLND+++WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           +TQ EFF LI  YFPMVYD+KHL++FCNS +GGL+K+AE LE+ER+GVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD 275
           CTFRKLRDTFF+GSTQKYAGVLYGLGVE   TT+
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]
BLAST of CmoCh05G003600 vs. TrEMBL
Match: W9QRX8_9ROSA (Putative CCR4-associated factor 1-7-like protein OS=Morus notabilis GN=L484_014468 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 3.2e-130
Identity = 219/267 (82.02%), Postives = 247/267 (92.51%), Query Frame = 1 

Query: 8   ESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKD 67
           +SI IREVWN NLE EFALIRE+VD++NY+AMDTEFPGVVLRPVG FKNIN++NY+TLKD
Sbjct: 10  DSIQIREVWNDNLEEEFALIREIVDKYNYVAMDTEFPGVVLRPVGNFKNINDYNYQTLKD 69

Query: 68  NVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSGID 127
           NVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+LLR  GID
Sbjct: 70  NVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIELLRQCGID 129

Query: 128 FKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFF 187
           FKKN E+GIDV RF ELLMSSGIVLND V+WVTFHSGYDFGYLLKLLTCQ LPDTQ  FF
Sbjct: 130 FKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCQSLPDTQAGFF 189

Query: 188 YLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLR 247
            LI  YFPMVYD+KHL+KFCNS++GGL+K+AE LE+ERVGVCHQAGSDSLLT+CTFRKLR
Sbjct: 190 DLINVYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTSCTFRKLR 249

Query: 248 DTFFSGSTQKYAGVLYGLGVENEPTTD 275
           DTFF+GST+KYAGVLYGLGVEN  TT+
Sbjct: 250 DTFFNGSTEKYAGVLYGLGVENGQTTN 276

[Close]
BLAST of CmoCh05G003600 vs. TrEMBL
Match: A0A067KMK9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07101 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 4.2e-130
Identity = 221/275 (80.36%), Postives = 249/275 (90.55%), Query Frame = 1 

Query: 1   MSTFPKAE-SIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINE 60
           MS  PK + SI IREVWN NLE EFALIRE+VDQFNY+AMDTEFPGVVLRPVG FKNIN+
Sbjct: 1   MSIIPKNDDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIND 60

Query: 61  FNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQ 120
           +NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIE 120

Query: 121 LLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQIL 180
           LLR  GIDFKKN E+GIDV RF ELLMSSG+VLNDSVYWVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNDSVYWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PDTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLT 240
           PDTQ  FF LI  YFP+VYD+KHL+KFCNS++GGL+K+AE LE+ERVGVCHQAGSDSLLT
Sbjct: 181 PDTQAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD 275
           +CTFRKLRD FF+GS +KYAGVLYGLGVEN   T+
Sbjct: 241 SCTFRKLRDNFFNGSAEKYAGVLYGLGVENGQNTN 275

[Close]
BLAST of CmoCh05G003600 vs. TrEMBL
Match: A0A0D2UK39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G244300 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 5.5e-130
Identity = 215/274 (78.47%), Postives = 250/274 (91.24%), Query Frame = 1 

Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS  PK ES++IREVWN NLE EFALIRE+VD +NY+AMDTEFPGVVLRPVGTFKNIN++
Sbjct: 1   MSGLPKGESVHIREVWNDNLEEEFALIREIVDTYNYVAMDTEFPGVVLRPVGTFKNINDY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTD +CIWQFNFREFN++EDI+A+DSI+L
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNLSEDIFASDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           LR  GIDFKKN E+GIDV RF ELLMSSG+VLND V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVTRFGELLMSSGVVLNDDVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           D+Q  FF LI+ YFPMVYD+KH++KFCNS++GGL+K+AE LE+ERVGVCHQAGSDSLLT+
Sbjct: 181 DSQAGFFDLIKIYFPMVYDIKHMMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD 275
           CTFRKLRD FF+GST+KYAGVLYGLGV+N   T+
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVQNGQNTN 274

[Close]
BLAST of CmoCh05G003600 vs. TAIR10
Match: AT2G32070.1 (AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 428.7 bits (1101), Expect = 2.7e-120
Identity = 201/270 (74.44%), Postives = 235/270 (87.04%), Query Frame = 1 

Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS F K +SI IREVWN NLE+E ALIREVVD F ++AMDTEFPG+V RPVGTFK   E+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTD-KYCIWQFNFREFNITEDIYATDSIQ 120
           +Y TLK NV+IL +IQLGLTFS+E GNLPTCGTD KYCIWQFNFREF++  DIYATDSI+
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQIL 180
           LLR SGIDF KN E GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PDTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLT 240
           P+TQ  FF +I  YFP VYD+KHL+KFCNS++GGL+K+AE L++ERVG+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFSGSTQKYAGVLYGLGVEN 270
           +CTFRKL++ FF GS +KY+GVLYGLGVEN
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVEN 270

[Close]
BLAST of CmoCh05G003600 vs. TAIR10
Match: AT1G80780.3 (AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 422.9 bits (1086), Expect = 1.5e-118
Identity = 195/270 (72.22%), Postives = 232/270 (85.93%), Query Frame = 1 

Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS F K +SI IREVWN NL+ E  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           +Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQFNFREF++  DI+A DSI+L
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           L+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           D+Q +FF LI  YFP VYD+KHL+KFCNS++GGL+K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENE 271
           CTFRKL++ FF G   KY+GVLYGLGVENE
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENE 270

[Close]
BLAST of CmoCh05G003600 vs. TAIR10
Match: AT5G10960.1 (AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 416.8 bits (1070), Expect = 1.1e-116
Identity = 192/268 (71.64%), Postives = 232/268 (86.57%), Query Frame = 1 

Query: 6   KAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTL 65
           K +SI IREVW++NL  EFALIRE+VD+F+YIAMDTEFPGVVL+PV TFK  N+ NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSG 125
           K+NVD+L LIQ+GLTFS+ENGNLPTCGTDK+CIWQFNFREFNI EDIYA++SI+LLR  G
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEE 185
           IDFKKN E+GIDV RF EL+MSSGIVLND++ WVTFH GYDFGYL+KLLTC+ LP  Q +
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRK 245
           FF L+  YFP VYD+KHL+ FCN ++GGL+++AE + +ERVG+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFSGSTQKYAGVLYGLGVENEPTT 274
           L++ +F GST+KY GVLYGLGVE+  TT
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]
BLAST of CmoCh05G003600 vs. TAIR10
Match: AT1G15920.2 (AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 340.9 bits (873), Expect = 7.3e-94
Identity = 159/264 (60.23%), Postives = 204/264 (77.27%), Query Frame = 1 

Query: 8   ESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNIN------EFN 67
           ++I IREVWNHNLE E ALI + +D F Y+AMDTEFPG+V + V    N N      E+N
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLL 127
           Y TLK NV++L LIQLGLT S+E GNLPTCGT+K CIWQFNFREFN+  D++A DSI+LL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPD 187
           R S ID +KN E G+D +RF+ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP+
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 TQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTAC 247
              +FF  +  +FP+VYD+K+L+ FC ++YGGL K+AE L ++RVG+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFSGSTQKYAGVLYGL 266
           TF K+++ FF+GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]
BLAST of CmoCh05G003600 vs. TAIR10
Match: AT3G44260.1 (AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 281.2 bits (718), Expect = 6.9e-76
Identity = 143/269 (53.16%), Postives = 191/269 (71.00%), Query Frame = 1 

Query: 5   PKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRT 64
           P   ++  REVW  NLE+EF LI E++D + +I+MDTEFPGV+ +    F N ++  Y  
Sbjct: 12  PDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDL-YTL 71

Query: 65  LKDNVDILNLIQLGLTFSEENGNLPTCGTDKY--CIWQFNFREFNITEDIYATDSIQLLR 124
           LK NVD L+LIQ+GLT S+ NGNLP  G D +   IW+FNFR+F++  D +A DSI+LLR
Sbjct: 72  LKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLR 131

Query: 125 DSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDT 184
             GIDF++N  +G++  RF+EL+MSSG+V N+ V WVTFHS YDFGYL+K+LT + LP  
Sbjct: 132 RQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGA 191

Query: 185 QEEFFYLIRTYF-PMVYDVKHLLKFC-NSIYGGLSKVAETLEIER-VGVCHQAGSDSLLT 244
             EF  ++R  F   VYDVKH++KFC   ++GGL +VA TLE+ R VG CHQAGSDSLLT
Sbjct: 192 LGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLT 251

Query: 245 ACTFRKLRDTFF-SGSTQKYAGVLYGLGV 268
              F+++RD +F     +K+AGVLYGL V
Sbjct: 252 WHAFQRMRDLYFVQDGPEKHAGVLYGLEV 279

[Close]
BLAST of CmoCh05G003600 vs. NCBI nr
Match: gi|1000974262|ref|XP_015572459.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Ricinus communis])

HSP 1 Score: 478.4 bits (1230), Expect = 8.4e-132
Identity = 220/273 (80.59%), Postives = 249/273 (91.21%), Query Frame = 1 

Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS  PK +SI+IREVWN NLE EF LIRE+VDQFNY+AMDTEFPGVVLRPVG FKNIN++
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+L
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           LR  GIDFKKN E+GIDV RF EL+MSSGIVLND V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           DTQ  FF LI TYFPMVYD+KHL+KFCNS++GGL+K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTT 274
           CTFRKLRD FF+GST+KYAGVLYGLGVEN   T
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVENGQNT 273

[Close]
BLAST of CmoCh05G003600 vs. NCBI nr
Match: gi|449441872|ref|XP_004138706.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus])

HSP 1 Score: 476.9 bits (1226), Expect = 2.4e-131
Identity = 221/274 (80.66%), Postives = 250/274 (91.24%), Query Frame = 1 

Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS  PK ESI IREVWN NLE EFALIR++VDQFNYIAMDTEFPGVV+RPVG+FKNINE+
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           NYRTL++NVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI +DIYA+DSI+L
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           LR+ GIDF+K  EEGIDV RF ELLMSSGIVLND+++WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           +TQ EFF LI  YFPMVYD+KHL++FCNS +GGL+K+AE LE+ER+GVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD 275
           CTFRKLRDTFF+GSTQKYAGVLYGLGVE   TT+
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]
BLAST of CmoCh05G003600 vs. NCBI nr
Match: gi|659088970|ref|XP_008445257.1| (PREDICTED: LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 7 [Cucumis melo])

HSP 1 Score: 473.0 bits (1216), Expect = 3.5e-130
Identity = 220/274 (80.29%), Postives = 248/274 (90.51%), Query Frame = 1 

Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS  PK ESI IREVWN NLE EFALIR++VDQFNYIAMDTEFPGVV+RPVG+FKNINE+
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           NYRTL++NVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI +DIYA+DSI+L
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           LR+ GIDF+K  EEGIDV RF ELLMSSGIVLND++ WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIXWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           +TQ EFF LI  YFPMVYD+KHL++FCNS +GGL+K+AE LE+ER+GVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD 275
           CTFRKLRDTFF+GS QKYAGVLYGLGVE   TT+
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVETGQTTN 274

[Close]
BLAST of CmoCh05G003600 vs. NCBI nr
Match: gi|703074973|ref|XP_010089956.1| (putative CCR4-associated factor 1-7-like protein [Morus notabilis])

HSP 1 Score: 472.6 bits (1215), Expect = 4.6e-130
Identity = 219/267 (82.02%), Postives = 247/267 (92.51%), Query Frame = 1 

Query: 8   ESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKD 67
           +SI IREVWN NLE EFALIRE+VD++NY+AMDTEFPGVVLRPVG FKNIN++NY+TLKD
Sbjct: 10  DSIQIREVWNDNLEEEFALIREIVDKYNYVAMDTEFPGVVLRPVGNFKNINDYNYQTLKD 69

Query: 68  NVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSGID 127
           NVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+LLR  GID
Sbjct: 70  NVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIELLRQCGID 129

Query: 128 FKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFF 187
           FKKN E+GIDV RF ELLMSSGIVLND V+WVTFHSGYDFGYLLKLLTCQ LPDTQ  FF
Sbjct: 130 FKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCQSLPDTQAGFF 189

Query: 188 YLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLR 247
            LI  YFPMVYD+KHL+KFCNS++GGL+K+AE LE+ERVGVCHQAGSDSLLT+CTFRKLR
Sbjct: 190 DLINVYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTSCTFRKLR 249

Query: 248 DTFFSGSTQKYAGVLYGLGVENEPTTD 275
           DTFF+GST+KYAGVLYGLGVEN  TT+
Sbjct: 250 DTFFNGSTEKYAGVLYGLGVENGQTTN 276

[Close]
BLAST of CmoCh05G003600 vs. NCBI nr
Match: gi|802626869|ref|XP_012076450.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas])

HSP 1 Score: 472.2 bits (1214), Expect = 6.0e-130
Identity = 221/275 (80.36%), Postives = 249/275 (90.55%), Query Frame = 1 

Query: 1   MSTFPKAE-SIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINE 60
           MS  PK + SI IREVWN NLE EFALIRE+VDQFNY+AMDTEFPGVVLRPVG FKNIN+
Sbjct: 1   MSIIPKNDDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIND 60

Query: 61  FNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQ 120
           +NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIE 120

Query: 121 LLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQIL 180
           LLR  GIDFKKN E+GIDV RF ELLMSSG+VLNDSVYWVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNDSVYWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PDTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLT 240
           PDTQ  FF LI  YFP+VYD+KHL+KFCNS++GGL+K+AE LE+ERVGVCHQAGSDSLLT
Sbjct: 181 PDTQAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD 275
           +CTFRKLRD FF+GS +KYAGVLYGLGVEN   T+
Sbjct: 241 SCTFRKLRDNFFNGSAEKYAGVLYGLGVENGQNTN 275

The following BLAST results are available for this feature:
BLAST of CmoCh05G003600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CAF1G_ARATH4.8e-11974.44Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE... [more]
CAF1F_ARATH9.9e-11772.12Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE... [more]
CAF1J_ARATH1.9e-11571.64Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 ... [more]
CAF1B_ARATH1.3e-9260.23Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE... [more]
CNOT7_DANRE2.4e-7856.81CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1[more]
BLAST of CmoCh05G003600 vs. TrEMBL
Match NameE-valueIdentityDescription
B9RNX3_RICCO5.8e-13280.59Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0921770 PE=4 SV=1[more]
A0A0A0LSM4_CUCSA1.7e-13180.66Ccr4-associated factor OS=Cucumis sativus GN=Csa_2G382590 PE=4 SV=1[more]
W9QRX8_9ROSA3.2e-13082.02Putative CCR4-associated factor 1-7-like protein OS=Morus notabilis GN=L484_0144... [more]
A0A067KMK9_JATCU4.2e-13080.36Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07101 PE=4 SV=1[more]
A0A0D2UK39_GOSRA5.5e-13078.47Uncharacterized protein OS=Gossypium raimondii GN=B456_010G244300 PE=4 SV=1[more]
BLAST of CmoCh05G003600 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G32070.12.7e-12074.44 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G80780.31.5e-11872.22 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT5G10960.11.1e-11671.64 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G15920.27.3e-9460.23 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G44260.16.9e-7653.16 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of CmoCh05G003600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1000974262|ref|XP_015572459.1|8.4e-13280.59PREDICTED: probable CCR4-associated factor 1 homolog 7 [Ricinus communis][more]
gi|449441872|ref|XP_004138706.1|2.4e-13180.66PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus][more]
gi|659088970|ref|XP_008445257.1|3.5e-13080.29PREDICTED: LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 7 [Cuc... [more]
gi|703074973|ref|XP_010089956.1|4.6e-13082.02putative CCR4-associated factor 1-7-like protein [Morus notabilis][more]
gi|802626869|ref|XP_012076450.1|6.0e-13080.36PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006941RNase_CAF1
IPR012337RNaseH-like_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G003600.1CmoCh05G003600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 159..243
score: 5.5E-8coord: 15..136
score: 1.0
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 5..267
score: 1.1E
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 11..265
score: 4.76
NoneNo IPR availablePANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 1..269
score: 7.4E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G003600Cucumber (Chinese Long) v3cmocucB0925
CmoCh05G003600Cucumber (Chinese Long) v3cmocucB0932
CmoCh05G003600Watermelon (97103) v2cmowmbB790
CmoCh05G003600Watermelon (97103) v2cmowmbB802
CmoCh05G003600Wax gourdcmowgoB0945
CmoCh05G003600Wax gourdcmowgoB0965
CmoCh05G003600Cucurbita moschata (Rifu)cmocmoB032
CmoCh05G003600Cucurbita moschata (Rifu)cmocmoB156
CmoCh05G003600Cucumber (Gy14) v1cgycmoB0463
CmoCh05G003600Cucumber (Gy14) v1cgycmoB0749
CmoCh05G003600Cucurbita maxima (Rimu)cmacmoB061
CmoCh05G003600Cucurbita maxima (Rimu)cmacmoB199
CmoCh05G003600Cucurbita maxima (Rimu)cmacmoB786
CmoCh05G003600Wild cucumber (PI 183967)cmocpiB788
CmoCh05G003600Wild cucumber (PI 183967)cmocpiB794
CmoCh05G003600Cucumber (Chinese Long) v2cmocuB785
CmoCh05G003600Cucumber (Chinese Long) v2cmocuB791
CmoCh05G003600Melon (DHL92) v3.5.1cmomeB716
CmoCh05G003600Melon (DHL92) v3.5.1cmomeB731
CmoCh05G003600Watermelon (Charleston Gray)cmowcgB704
CmoCh05G003600Watermelon (Charleston Gray)cmowcgB716
CmoCh05G003600Watermelon (97103) v1cmowmB748
CmoCh05G003600Watermelon (97103) v1cmowmB751
CmoCh05G003600Cucurbita pepo (Zucchini)cmocpeB720
CmoCh05G003600Cucurbita pepo (Zucchini)cmocpeB738
CmoCh05G003600Cucurbita pepo (Zucchini)cmocpeB750
CmoCh05G003600Bottle gourd (USVL1VR-Ls)cmolsiB719
CmoCh05G003600Bottle gourd (USVL1VR-Ls)cmolsiB731
CmoCh05G003600Cucumber (Gy14) v2cgybcmoB244
CmoCh05G003600Cucumber (Gy14) v2cgybcmoB532
CmoCh05G003600Melon (DHL92) v3.6.1cmomedB813
CmoCh05G003600Melon (DHL92) v3.6.1cmomedB828
CmoCh05G003600Silver-seed gourdcarcmoB0196
CmoCh05G003600Silver-seed gourdcarcmoB0878
CmoCh05G003600Silver-seed gourdcarcmoB1319