CmoCh05G003600.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G003600.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Ccr4-associated factor, putative) (3.1.13.4)
Location	Cmo_Chr05 : 1630147 .. 1630971 (+)
Sequence length	825

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAACTTGGAGGCAGAGTTTGCTTTAATACGTGAAGTCGTCGACCAATTCAACTACATAGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATTTGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAAGATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTCATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAACTGTTGACTTGCCAAATCTTACCAGACACCCAGGAGGAGTTTTTTTATTTGATCCGTACGTATTTCCCAATGGTTTATGATGTCAAGCATTTGTTGAAGTTTTGCAACAGTATCTATGGTGGGCTCAGCAAGGTTGCAGAAACATTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAAATATGCCGGTGTTTTATATGGTCTCGGTGTCGAAAATGAACCGACTACTGATTGA

mRNA sequence

ATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAACTTGGAGGCAGAGTTTGCTTTAATACGTGAAGTCGTCGACCAATTCAACTACATAGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATTTGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAAGATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTCATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAACTGTTGACTTGCCAAATCTTACCAGACACCCAGGAGGAGTTTTTTTATTTGATCCGTACGTATTTCCCAATGGTTTATGATGTCAAGCATTTGTTGAAGTTTTGCAACAGTATCTATGGTGGGCTCAGCAAGGTTGCAGAAACATTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAAATATGCCGGTGTTTTATATGGTCTCGGTGTCGAAAATGAACCGACTACTGATTGA

Coding sequence (CDS)

ATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAACTTGGAGGCAGAGTTTGCTTTAATACGTGAAGTCGTCGACCAATTCAACTACATAGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATTTGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAAGATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTCATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAACTGTTGACTTGCCAAATCTTACCAGACACCCAGGAGGAGTTTTTTTATTTGATCCGTACGTATTTCCCAATGGTTTATGATGTCAAGCATTTGTTGAAGTTTTGCAACAGTATCTATGGTGGGCTCAGCAAGGTTGCAGAAACATTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAAATATGCCGGTGTTTTATATGGTCTCGGTGTCGAAAATGAACCGACTACTGATTGA

Homology

[Close]

BLAST of CmoCh05G003600.1 vs. Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 428.7 bits (1101), Expect = 4.8e-119
Identity = 201/270 (74.44%), Postives = 235/270 (87.04%), Query Frame = 1


Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS F K +SI IREVWN NLE+E ALIREVVD F ++AMDTEFPG+V RPVGTFK   E+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTD-KYCIWQFNFREFNITEDIYATDSIQ 120
           +Y TLK NV+IL +IQLGLTFS+E GNLPTCGTD KYCIWQFNFREF++  DIYATDSI+
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQIL 180
           LLR SGIDF KN E GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PDTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLT 240
           P+TQ  FF +I  YFP VYD+KHL+KFCNS++GGL+K+AE L++ERVG+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFSGSTQKYAGVLYGLGVEN 270
           +CTFRKL++ FF GS +KY+GVLYGLGVEN
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVEN 270

[Close]

BLAST of CmoCh05G003600.1 vs. Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 9.9e-117
Identity = 194/269 (72.12%), Postives = 231/269 (85.87%), Query Frame = 1


Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS F K +SI IREVWN NL+ E  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           +Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQFNFREF++  DI+A DSI+L
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           L+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           D+Q +FF LI  YFP VYD+KHL+KFCNS++GGL+K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVEN 270
           CTFRKL++ FF G   KY+GVLYGLGVEN
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVEN 269

[Close]

BLAST of CmoCh05G003600.1 vs. Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 1.9e-115
Identity = 192/268 (71.64%), Postives = 232/268 (86.57%), Query Frame = 1


Query: 6   KAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTL 65
           K +SI IREVW++NL  EFALIRE+VD+F+YIAMDTEFPGVVL+PV TFK  N+ NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSG 125
           K+NVD+L LIQ+GLTFS+ENGNLPTCGTDK+CIWQFNFREFNI EDIYA++SI+LLR  G
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEE 185
           IDFKKN E+GIDV RF EL+MSSGIVLND++ WVTFH GYDFGYL+KLLTC+ LP  Q +
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRK 245
           FF L+  YFP VYD+KHL+ FCN ++GGL+++AE + +ERVG+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFSGSTQKYAGVLYGLGVENEPTT 274
           L++ +F GST+KY GVLYGLGVE+  TT
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]

BLAST of CmoCh05G003600.1 vs. Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.3e-92
Identity = 159/264 (60.23%), Postives = 204/264 (77.27%), Query Frame = 1


Query: 8   ESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNIN------EFN 67
           ++I IREVWNHNLE E ALI + +D F Y+AMDTEFPG+V + V    N N      E+N
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLL 127
           Y TLK NV++L LIQLGLT S+E GNLPTCGT+K CIWQFNFREFN+  D++A DSI+LL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPD 187
           R S ID +KN E G+D +RF+ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP+
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 TQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTAC 247
              +FF  +  +FP+VYD+K+L+ FC ++YGGL K+AE L ++RVG+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFSGSTQKYAGVLYGL 266
           TF K+++ FF+GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]

BLAST of CmoCh05G003600.1 vs. Swiss-Prot
Match: CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 2.4e-78
Identity = 146/257 (56.81%), Postives = 189/257 (73.54%), Query Frame = 1


Query: 12  IREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDI 71
           I EVW  NLE E   IR+V  +FNYIAMDTEFPGVV RP+G F++  ++ Y+ L+ NVD+
Sbjct: 12  ICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71

Query: 72  LNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSGIDFKKN 131
           L +IQLGLTF  E G  P  GT     WQFNF+ FN+TED+YA DSI+LL  SGI FKK+
Sbjct: 72  LKIIQLGLTFMNEQGEYPP-GTST---WQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKH 131

Query: 132 KEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIR 191
           +EEGI+   F+ELLM+SG+VL + V W++FHSGYDFGYL+K+L+   LPD + +FF ++R
Sbjct: 132 EEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEILR 191

Query: 192 TYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFF 251
            +FP++YDVK+L+K C ++ GGL +VAE LE+ER+G  HQAGSDSLLT   F K+R+ FF
Sbjct: 192 LFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFF 251

Query: 252 SG--STQKYAGVLYGLG 267
                  KY G LYGLG
Sbjct: 252 EDHIDDAKYCGHLYGLG 263

[Close]

BLAST of CmoCh05G003600.1 vs. TrEMBL
Match: B9RNX3_RICCO (Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0921770 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 5.8e-132
Identity = 220/273 (80.59%), Postives = 249/273 (91.21%), Query Frame = 1


Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS  PK +SI+IREVWN NLE EF LIRE+VDQFNY+AMDTEFPGVVLRPVG FKNIN++
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+L
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           LR  GIDFKKN E+GIDV RF EL+MSSGIVLND V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           DTQ  FF LI TYFPMVYD+KHL+KFCNS++GGL+K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTT 274
           CTFRKLRD FF+GST+KYAGVLYGLGVEN   T
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVENGQNT 273

[Close]

BLAST of CmoCh05G003600.1 vs. TrEMBL
Match: A0A0A0LSM4_CUCSA (Ccr4-associated factor OS=Cucumis sativus GN=Csa_2G382590 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 1.7e-131
Identity = 221/274 (80.66%), Postives = 250/274 (91.24%), Query Frame = 1


Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS  PK ESI IREVWN NLE EFALIR++VDQFNYIAMDTEFPGVV+RPVG+FKNINE+
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           NYRTL++NVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI +DIYA+DSI+L
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           LR+ GIDF+K  EEGIDV RF ELLMSSGIVLND+++WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           +TQ EFF LI  YFPMVYD+KHL++FCNS +GGL+K+AE LE+ER+GVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD 275
           CTFRKLRDTFF+GSTQKYAGVLYGLGVE   TT+
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of CmoCh05G003600.1 vs. TrEMBL
Match: W9QRX8_9ROSA (Putative CCR4-associated factor 1-7-like protein OS=Morus notabilis GN=L484_014468 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 3.2e-130
Identity = 219/267 (82.02%), Postives = 247/267 (92.51%), Query Frame = 1


Query: 8   ESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKD 67
           +SI IREVWN NLE EFALIRE+VD++NY+AMDTEFPGVVLRPVG FKNIN++NY+TLKD
Sbjct: 10  DSIQIREVWNDNLEEEFALIREIVDKYNYVAMDTEFPGVVLRPVGNFKNINDYNYQTLKD 69

Query: 68  NVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSGID 127
           NVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+LLR  GID
Sbjct: 70  NVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIELLRQCGID 129

Query: 128 FKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFF 187
           FKKN E+GIDV RF ELLMSSGIVLND V+WVTFHSGYDFGYLLKLLTCQ LPDTQ  FF
Sbjct: 130 FKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCQSLPDTQAGFF 189

Query: 188 YLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLR 247
            LI  YFPMVYD+KHL+KFCNS++GGL+K+AE LE+ERVGVCHQAGSDSLLT+CTFRKLR
Sbjct: 190 DLINVYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTSCTFRKLR 249

Query: 248 DTFFSGSTQKYAGVLYGLGVENEPTTD 275
           DTFF+GST+KYAGVLYGLGVEN  TT+
Sbjct: 250 DTFFNGSTEKYAGVLYGLGVENGQTTN 276

[Close]

BLAST of CmoCh05G003600.1 vs. TrEMBL
Match: A0A067KMK9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07101 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 4.2e-130
Identity = 221/275 (80.36%), Postives = 249/275 (90.55%), Query Frame = 1


Query: 1   MSTFPKAE-SIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINE 60
           MS  PK + SI IREVWN NLE EFALIRE+VDQFNY+AMDTEFPGVVLRPVG FKNIN+
Sbjct: 1   MSIIPKNDDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIND 60

Query: 61  FNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQ 120
           +NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIE 120

Query: 121 LLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQIL 180
           LLR  GIDFKKN E+GIDV RF ELLMSSG+VLNDSVYWVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNDSVYWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PDTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLT 240
           PDTQ  FF LI  YFP+VYD+KHL+KFCNS++GGL+K+AE LE+ERVGVCHQAGSDSLLT
Sbjct: 181 PDTQAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD 275
           +CTFRKLRD FF+GS +KYAGVLYGLGVEN   T+
Sbjct: 241 SCTFRKLRDNFFNGSAEKYAGVLYGLGVENGQNTN 275

[Close]

BLAST of CmoCh05G003600.1 vs. TrEMBL
Match: A0A0D2UK39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G244300 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 5.5e-130
Identity = 215/274 (78.47%), Postives = 250/274 (91.24%), Query Frame = 1


Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS  PK ES++IREVWN NLE EFALIRE+VD +NY+AMDTEFPGVVLRPVGTFKNIN++
Sbjct: 1   MSGLPKGESVHIREVWNDNLEEEFALIREIVDTYNYVAMDTEFPGVVLRPVGTFKNINDY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTD +CIWQFNFREFN++EDI+A+DSI+L
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNLSEDIFASDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           LR  GIDFKKN E+GIDV RF ELLMSSG+VLND V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVTRFGELLMSSGVVLNDDVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           D+Q  FF LI+ YFPMVYD+KH++KFCNS++GGL+K+AE LE+ERVGVCHQAGSDSLLT+
Sbjct: 181 DSQAGFFDLIKIYFPMVYDIKHMMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD 275
           CTFRKLRD FF+GST+KYAGVLYGLGV+N   T+
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVQNGQNTN 274

[Close]

BLAST of CmoCh05G003600.1 vs. TAIR10
Match: AT2G32070.1 (AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 428.7 bits (1101), Expect = 2.7e-120
Identity = 201/270 (74.44%), Postives = 235/270 (87.04%), Query Frame = 1


Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS F K +SI IREVWN NLE+E ALIREVVD F ++AMDTEFPG+V RPVGTFK   E+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTD-KYCIWQFNFREFNITEDIYATDSIQ 120
           +Y TLK NV+IL +IQLGLTFS+E GNLPTCGTD KYCIWQFNFREF++  DIYATDSI+
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQIL 180
           LLR SGIDF KN E GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PDTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLT 240
           P+TQ  FF +I  YFP VYD+KHL+KFCNS++GGL+K+AE L++ERVG+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFSGSTQKYAGVLYGLGVEN 270
           +CTFRKL++ FF GS +KY+GVLYGLGVEN
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVEN 270

[Close]

BLAST of CmoCh05G003600.1 vs. TAIR10
Match: AT1G80780.3 (AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 422.9 bits (1086), Expect = 1.5e-118
Identity = 195/270 (72.22%), Postives = 232/270 (85.93%), Query Frame = 1


Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS F K +SI IREVWN NL+ E  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           +Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQFNFREF++  DI+A DSI+L
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           L+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           D+Q +FF LI  YFP VYD+KHL+KFCNS++GGL+K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENE 271
           CTFRKL++ FF G   KY+GVLYGLGVENE
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENE 270

[Close]

BLAST of CmoCh05G003600.1 vs. TAIR10
Match: AT5G10960.1 (AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 416.8 bits (1070), Expect = 1.1e-116
Identity = 192/268 (71.64%), Postives = 232/268 (86.57%), Query Frame = 1


Query: 6   KAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTL 65
           K +SI IREVW++NL  EFALIRE+VD+F+YIAMDTEFPGVVL+PV TFK  N+ NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSG 125
           K+NVD+L LIQ+GLTFS+ENGNLPTCGTDK+CIWQFNFREFNI EDIYA++SI+LLR  G
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEE 185
           IDFKKN E+GIDV RF EL+MSSGIVLND++ WVTFH GYDFGYL+KLLTC+ LP  Q +
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRK 245
           FF L+  YFP VYD+KHL+ FCN ++GGL+++AE + +ERVG+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFSGSTQKYAGVLYGLGVENEPTT 274
           L++ +F GST+KY GVLYGLGVE+  TT
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]

BLAST of CmoCh05G003600.1 vs. TAIR10
Match: AT1G15920.2 (AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 340.9 bits (873), Expect = 7.3e-94
Identity = 159/264 (60.23%), Postives = 204/264 (77.27%), Query Frame = 1


Query: 8   ESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNIN------EFN 67
           ++I IREVWNHNLE E ALI + +D F Y+AMDTEFPG+V + V    N N      E+N
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLL 127
           Y TLK NV++L LIQLGLT S+E GNLPTCGT+K CIWQFNFREFN+  D++A DSI+LL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPD 187
           R S ID +KN E G+D +RF+ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP+
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 TQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTAC 247
              +FF  +  +FP+VYD+K+L+ FC ++YGGL K+AE L ++RVG+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFSGSTQKYAGVLYGL 266
           TF K+++ FF+GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]

BLAST of CmoCh05G003600.1 vs. TAIR10
Match: AT3G44260.1 (AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 281.2 bits (718), Expect = 6.9e-76
Identity = 143/269 (53.16%), Postives = 191/269 (71.00%), Query Frame = 1


Query: 5   PKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRT 64
           P   ++  REVW  NLE+EF LI E++D + +I+MDTEFPGV+ +    F N ++  Y  
Sbjct: 12  PDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDL-YTL 71

Query: 65  LKDNVDILNLIQLGLTFSEENGNLPTCGTDKY--CIWQFNFREFNITEDIYATDSIQLLR 124
           LK NVD L+LIQ+GLT S+ NGNLP  G D +   IW+FNFR+F++  D +A DSI+LLR
Sbjct: 72  LKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLR 131

Query: 125 DSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDT 184
             GIDF++N  +G++  RF+EL+MSSG+V N+ V WVTFHS YDFGYL+K+LT + LP  
Sbjct: 132 RQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGA 191

Query: 185 QEEFFYLIRTYF-PMVYDVKHLLKFC-NSIYGGLSKVAETLEIER-VGVCHQAGSDSLLT 244
             EF  ++R  F   VYDVKH++KFC   ++GGL +VA TLE+ R VG CHQAGSDSLLT
Sbjct: 192 LGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLT 251

Query: 245 ACTFRKLRDTFF-SGSTQKYAGVLYGLGV 268
              F+++RD +F     +K+AGVLYGL V
Sbjct: 252 WHAFQRMRDLYFVQDGPEKHAGVLYGLEV 279

[Close]

BLAST of CmoCh05G003600.1 vs. NCBI nr
Match: gi|1000974262|ref|XP_015572459.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Ricinus communis])

HSP 1 Score: 478.4 bits (1230), Expect = 8.4e-132
Identity = 220/273 (80.59%), Postives = 249/273 (91.21%), Query Frame = 1


Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS  PK +SI+IREVWN NLE EF LIRE+VDQFNY+AMDTEFPGVVLRPVG FKNIN++
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+L
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           LR  GIDFKKN E+GIDV RF EL+MSSGIVLND V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           DTQ  FF LI TYFPMVYD+KHL+KFCNS++GGL+K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTT 274
           CTFRKLRD FF+GST+KYAGVLYGLGVEN   T
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVENGQNT 273

[Close]

BLAST of CmoCh05G003600.1 vs. NCBI nr
Match: gi|449441872|ref|XP_004138706.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus])

HSP 1 Score: 476.9 bits (1226), Expect = 2.4e-131
Identity = 221/274 (80.66%), Postives = 250/274 (91.24%), Query Frame = 1


Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS  PK ESI IREVWN NLE EFALIR++VDQFNYIAMDTEFPGVV+RPVG+FKNINE+
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           NYRTL++NVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI +DIYA+DSI+L
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           LR+ GIDF+K  EEGIDV RF ELLMSSGIVLND+++WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           +TQ EFF LI  YFPMVYD+KHL++FCNS +GGL+K+AE LE+ER+GVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD 275
           CTFRKLRDTFF+GSTQKYAGVLYGLGVE   TT+
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of CmoCh05G003600.1 vs. NCBI nr
Match: gi|659088970|ref|XP_008445257.1| (PREDICTED: LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 7 [Cucumis melo])

HSP 1 Score: 473.0 bits (1216), Expect = 3.5e-130
Identity = 220/274 (80.29%), Postives = 248/274 (90.51%), Query Frame = 1


Query: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60
           MS  PK ESI IREVWN NLE EFALIR++VDQFNYIAMDTEFPGVV+RPVG+FKNINE+
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120
           NYRTL++NVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI +DIYA+DSI+L
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180
           LR+ GIDF+K  EEGIDV RF ELLMSSGIVLND++ WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIXWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240
           +TQ EFF LI  YFPMVYD+KHL++FCNS +GGL+K+AE LE+ER+GVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD 275
           CTFRKLRDTFF+GS QKYAGVLYGLGVE   TT+
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of CmoCh05G003600.1 vs. NCBI nr
Match: gi|703074973|ref|XP_010089956.1| (putative CCR4-associated factor 1-7-like protein [Morus notabilis])

HSP 1 Score: 472.6 bits (1215), Expect = 4.6e-130
Identity = 219/267 (82.02%), Postives = 247/267 (92.51%), Query Frame = 1


Query: 8   ESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKD 67
           +SI IREVWN NLE EFALIRE+VD++NY+AMDTEFPGVVLRPVG FKNIN++NY+TLKD
Sbjct: 10  DSIQIREVWNDNLEEEFALIREIVDKYNYVAMDTEFPGVVLRPVGNFKNINDYNYQTLKD 69

Query: 68  NVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSGID 127
           NVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+LLR  GID
Sbjct: 70  NVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIELLRQCGID 129

Query: 128 FKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFF 187
           FKKN E+GIDV RF ELLMSSGIVLND V+WVTFHSGYDFGYLLKLLTCQ LPDTQ  FF
Sbjct: 130 FKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCQSLPDTQAGFF 189

Query: 188 YLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLR 247
            LI  YFPMVYD+KHL+KFCNS++GGL+K+AE LE+ERVGVCHQAGSDSLLT+CTFRKLR
Sbjct: 190 DLINVYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTSCTFRKLR 249

Query: 248 DTFFSGSTQKYAGVLYGLGVENEPTTD 275
           DTFF+GST+KYAGVLYGLGVEN  TT+
Sbjct: 250 DTFFNGSTEKYAGVLYGLGVENGQTTN 276

[Close]

BLAST of CmoCh05G003600.1 vs. NCBI nr
Match: gi|802626869|ref|XP_012076450.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas])

HSP 1 Score: 472.2 bits (1214), Expect = 6.0e-130
Identity = 221/275 (80.36%), Postives = 249/275 (90.55%), Query Frame = 1


Query: 1   MSTFPKAE-SIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINE 60
           MS  PK + SI IREVWN NLE EFALIRE+VDQFNY+AMDTEFPGVVLRPVG FKNIN+
Sbjct: 1   MSIIPKNDDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIND 60

Query: 61  FNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQ 120
           +NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIE 120

Query: 121 LLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQIL 180
           LLR  GIDFKKN E+GIDV RF ELLMSSG+VLNDSVYWVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNDSVYWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PDTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLT 240
           PDTQ  FF LI  YFP+VYD+KHL+KFCNS++GGL+K+AE LE+ERVGVCHQAGSDSLLT
Sbjct: 181 PDTQAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD 275
           +CTFRKLRD FF+GS +KYAGVLYGLGVEN   T+
Sbjct: 241 SCTFRKLRDNFFNGSAEKYAGVLYGLGVENGQNTN 275

The following BLAST results are available for this feature:

BLAST of CmoCh05G003600.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CAF1G_ARATH	4.8e-119	74.44	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE...	[more]
CAF1F_ARATH	9.9e-117	72.12	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE...	[more]
CAF1J_ARATH	1.9e-115	71.64	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 ...	[more]
CAF1B_ARATH	1.3e-92	60.23	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE...	[more]
CNOT7_DANRE	2.4e-78	56.81	CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1	[more]

BLAST of CmoCh05G003600.1 vs. TrEMBL


Match Name	E-value	Identity	Description
B9RNX3_RICCO	5.8e-132	80.59	Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0921770 PE=4 SV=1	[more]
A0A0A0LSM4_CUCSA	1.7e-131	80.66	Ccr4-associated factor OS=Cucumis sativus GN=Csa_2G382590 PE=4 SV=1	[more]
W9QRX8_9ROSA	3.2e-130	82.02	Putative CCR4-associated factor 1-7-like protein OS=Morus notabilis GN=L484_0144...	[more]
A0A067KMK9_JATCU	4.2e-130	80.36	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07101 PE=4 SV=1	[more]
A0A0D2UK39_GOSRA	5.5e-130	78.47	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G244300 PE=4 SV=1	[more]

BLAST of CmoCh05G003600.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32070.1	2.7e-120	74.44	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	1.5e-118	72.22	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	1.1e-116	71.64	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G15920.2	7.3e-94	60.23	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G44260.1	6.9e-76	53.16	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of CmoCh05G003600.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1000974262\|ref\|XP_015572459.1\|	8.4e-132	80.59	PREDICTED: probable CCR4-associated factor 1 homolog 7 [Ricinus communis]	[more]
gi\|449441872\|ref\|XP_004138706.1\|	2.4e-131	80.66	PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus]	[more]
gi\|659088970\|ref\|XP_008445257.1\|	3.5e-130	80.29	PREDICTED: LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 7 [Cuc...	[more]
gi\|703074973\|ref\|XP_010089956.1\|	4.6e-130	82.02	putative CCR4-associated factor 1-7-like protein [Morus notabilis]	[more]
gi\|802626869\|ref\|XP_012076450.1\|	6.0e-130	80.36	PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006941	RNase_CAF1
IPR012337	RNaseH-like_sf

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh05G003600	CmoCh05G003600	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh05G003600.1	CmoCh05G003600.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G003600.1.exon.1	CmoCh05G003600.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G003600.1.CDS.1	CmoCh05G003600.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 159..243 score: 5.5E-8coord: 15..136 score: 1.0
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 5..267 score: 1.1E
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 11..265 score: 4.76
None	No IPR available	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 1..269 score: 7.4E