CmoCh04G031100 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G031100
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionLactoylglutathione lyase/glyoxalase I family protein
LocationCmo_Chr04 : 21609378 .. 21611005 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTCATTGCGTTCACATCTTAATTTCATCAAATTCGCAGCCTCCGTCGCCGGTCCATTGGCGGGCTCTTCTTCTTCTGTTTTCGCCATTTCGTTACTGTAAGTTCCACCATATGTACAGTTCTTATTTCTGTTAATCTCCGCTCCAAATCGTAAGCGTAACATTTTTTTTGTCTTCCTCGTGCCGGCTAACCCAGTGATGCACTGAAAACTCGAAAGAGAGTTATGGCAGCAGCGTCTTTTAAGTGGATACTTCAATTACACAAGGACGTTCCCAGAGCCGCAAGATTCTACTCAGAGGGCTTGGACTTTACTGTTCATGTCTGCACTCTTCGTTGGGCGGAGCTTCAGTCCGGGCCTCTCAAACTCGCTCTCATGCAATCCAAGTAATTGCGCTATTTTTTGATTCTCTACGAAATCATTAATCCTTGCATTTTATGTGTTCTGTTGATCTGTTTACACCAAAACGATTGTGCCATAGTTAGGTGTCTTGTATGTGTTTGATGTAGTGCCTGCGAGAAATTAAGAATGAAAAACGGTCGAATACTATTAGCCAAGCGTCGTTTGTTAGTGGTTGTATTCGTATAGAGGTTCATCGGGGCAATGGGTAATGAGCTTCATATATAAATGGTTCAATTTCATAAAATTGATTACAGAAGATATATGGAAGTAGGAAAGAATGAACCACGGAGAAATGGTAGGAAGTTCTATTGTTCGGGAGGATATTGGAAGTTTATGACGAGTACAACTTACATTGTTAACTCGGTTCTTCGCACGTGGATTGATGGACATTTCATGAAAATTTGGTGTTTGTTGAACGCATTTCTCATGAAGTACTAGTTCTTAAATTGTTTCCCTTTAGAGTTGGCCGTGATTGAGAGGTATTGTAACAGCCTACCCCACCGCTAATAGATATTGTCCTCTTTGAACTTTCTCTTGTGGGCTTCCCCTCAAGGTTTTAAAACGCATCTACTAGGGAGAGGTTTCAACACCCTTATAAGGAATGTTTCGATCCCCTCTTCAACCGATGTAGGATCTCACTGGTATTGAATGTTTAAATCGCTGCATGGGCTTGCTTTATCCTTAGTATGAATTATCAAAGCAAGCAAGTTGAGCCGTATTTTGAGATAAATATTTTGTTCCCCTAGTTTGATATAGAAACTTGATGTTTTAATTTCACATATTTAGATGCTTTGGCCTTGATTGGATGCTTAATCTGCTAACTTGGAGTCACAGTGACCATATTGTGCAACAGAAGGGATATTCTTCGCTGCTATCATTCACGGTGACAGATATTAACAGCACGGTAACCAAATTAATGGCAATGGGAGCTGAACTAGATGGTCCAATAAAGTATGAAATACACGGAAAGGTATAAACTCGCCACCCCACTCTCTTGAATCATAAATGATTAAGGCTTTTAAAGCTTCAATTGCTTGTTTCAGGTTGCATCCATGCGATGTATTGACGGTCATATGTTGGGCCTTTATGAACCAGCATAAGAGCTCAGAATTAACGTTCTTAAATACTAGCAACATATGGAGGCAGCAGTGTGCTTATGGTTTCTTCAGCTCCACCAAAGGCAAGGAGAAGACATGGGATATCACATTTTCCTTCAGATTTCCTTGA

mRNA sequence

TGTTCATTGCGTTCACATCTTAATTTCATCAAATTCGCAGCCTCCGTCGCCGGTCCATTGGCGGGCTCTTCTTCTTCTGTTTTCGCCATTTCGTTACTTGATGCACTGAAAACTCGAAAGAGAGTTATGGCAGCAGCGTCTTTTAAGTGGATACTTCAATTACACAAGGACGTTCCCAGAGCCGCAAGATTCTACTCAGAGGGCTTGGACTTTACTGTTCATGTCTGCACTCTTCGTTGGGCGGAGCTTCAGTCCGGGCCTCTCAAACTCGCTCTCATGCAATCCAATGACCATATTGTGCAACAGAAGGGATATTCTTCGCTGCTATCATTCACGGTGACAGATATTAACAGCACGGTAACCAAATTAATGGCAATGGGAGCTGAACTAGATGGTCCAATAAAGTTGCATCCATGCGATGTATTGACGGTCATATGTTGGGCCTTTATGAACCAGCATAAGAGCTCAGAATTAACGTTCTTAAATACTAGCAACATATGGAGGCAGCAGTGTGCTTATGGTTTCTTCAGCTCCACCAAAGGCAAGGAGAAGACATGGGATATCACATTTTCCTTCAGATTTCCTTGA

Coding sequence (CDS)

ATGGCAGCAGCGTCTTTTAAGTGGATACTTCAATTACACAAGGACGTTCCCAGAGCCGCAAGATTCTACTCAGAGGGCTTGGACTTTACTGTTCATGTCTGCACTCTTCGTTGGGCGGAGCTTCAGTCCGGGCCTCTCAAACTCGCTCTCATGCAATCCAATGACCATATTGTGCAACAGAAGGGATATTCTTCGCTGCTATCATTCACGGTGACAGATATTAACAGCACGGTAACCAAATTAATGGCAATGGGAGCTGAACTAGATGGTCCAATAAAGTTGCATCCATGCGATGTATTGACGGTCATATGTTGGGCCTTTATGAACCAGCATAAGAGCTCAGAATTAACGTTCTTAAATACTAGCAACATATGGAGGCAGCAGTGTGCTTATGGTTTCTTCAGCTCCACCAAAGGCAAGGAGAAGACATGGGATATCACATTTTCCTTCAGATTTCCTTGA
BLAST of CmoCh04G031100 vs. TrEMBL
Match: A0A0A0LQS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404930 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.8e-43
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 1

Query: 1  MAAASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQSNDHIVQQ 60
          MAAASF+WILQLHKDVP+AARFYSEGLDFTV+VCTLRWAELQSGPLKLALMQSNDHIVQQ
Sbjct: 1  MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSNDHIVQQ 60

Query: 61 KGYSSLLSFTVTDINSTVTKLMAMGAELDGPIK 94
          KGYSSLLSFTVTDINSTVTKLMAMGAELDG IK
Sbjct: 61 KGYSSLLSFTVTDINSTVTKLMAMGAELDGSIK 93

BLAST of CmoCh04G031100 vs. TrEMBL
Match: F6HUQ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00850 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.1e-38
Identity = 80/91 (87.91%), Postives = 85/91 (93.41%), Query Frame = 1

Query: 3  AASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQSNDHIVQQKG 62
          AASF+WILQLHKDVPRAARFYSEGLDFT++VCTLRWAELQSGPLKLALMQ+      QKG
Sbjct: 2  AASFRWILQLHKDVPRAARFYSEGLDFTINVCTLRWAELQSGPLKLALMQNQSDHDMQKG 61

Query: 63 YSSLLSFTVTDINSTVTKLMAMGAELDGPIK 94
          YSSLLSFTVTDINSTVTKLMA+GAELDGPIK
Sbjct: 62 YSSLLSFTVTDINSTVTKLMALGAELDGPIK 92

BLAST of CmoCh04G031100 vs. TrEMBL
Match: A9PA49_POPTR (Lactoylglutathione lyase family protein OS=Populus trichocarpa GN=POPTR_0003s13490g PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.0e-38
Identity = 80/91 (87.91%), Postives = 88/91 (96.70%), Query Frame = 1

Query: 3  AASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQSNDHIVQQKG 62
          AASF+WILQLHKDVP+AARFYSEGLDFTV+VCTLRWAELQSG LKLALMQS+++ V QKG
Sbjct: 4  AASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGSLKLALMQSHNNHVVQKG 63

Query: 63 YSSLLSFTVTDINSTVTKLMAMGAELDGPIK 94
          YSSLLSFTVTDIN+TVTKLMA+GAELDGPIK
Sbjct: 64 YSSLLSFTVTDINTTVTKLMALGAELDGPIK 94

BLAST of CmoCh04G031100 vs. TrEMBL
Match: B9RCL3_RICCO (Catalytic, putative OS=Ricinus communis GN=RCOM_1689770 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-37
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 1

Query: 1  MAAASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQS-NDHIVQ 60
          MAAASF+WILQLHKDVP+AARFYS GLDFTV+VCTLRWAELQSG LKLALMQS NDH+V 
Sbjct: 1  MAAASFRWILQLHKDVPKAARFYSHGLDFTVNVCTLRWAELQSGSLKLALMQSPNDHVV- 60

Query: 61 QKGYSSLLSFTVTDINSTVTKLMAMGAELDGPIK 94
          QKGYSS+LSFTVTDINSTVTKLMA+GAELDG IK
Sbjct: 61 QKGYSSMLSFTVTDINSTVTKLMALGAELDGSIK 93

BLAST of CmoCh04G031100 vs. TrEMBL
Match: A0A103Y7B5_CYNCS (Glyoxalase-like domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017814 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.7e-37
Identity = 76/92 (82.61%), Postives = 87/92 (94.57%), Query Frame = 1

Query: 2  AAASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQSNDHIVQQK 61
          A+ASF+WILQLHKDVP+AARFY EGLDF+V+VCTLRWAEL+SGPLKL+LM S+  IV QK
Sbjct: 5  ASASFRWILQLHKDVPKAARFYKEGLDFSVNVCTLRWAELESGPLKLSLMHSSSEIVVQK 64

Query: 62 GYSSLLSFTVTDINSTVTKLMAMGAELDGPIK 94
          GYSSLLSFTVTDIN+TVTKLMA+GAE+DGPIK
Sbjct: 65 GYSSLLSFTVTDINNTVTKLMALGAEMDGPIK 96

BLAST of CmoCh04G031100 vs. TAIR10
Match: AT5G41650.1 (AT5G41650.1 Lactoylglutathione lyase / glyoxalase I family protein)

HSP 1 Score: 152.5 bits (384), Expect = 2.1e-37
Identity = 73/93 (78.49%), Postives = 85/93 (91.40%), Query Frame = 1

Query: 1  MAAASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQSNDHIVQQ 60
          MA ASF+WILQLH+DVP+AARFY++GLDF+V+V TLRWAEL SGP+KLALMQS  + V +
Sbjct: 1  MATASFRWILQLHRDVPKAARFYAQGLDFSVNVVTLRWAELHSGPIKLALMQSPSNHVAE 60

Query: 61 KGYSSLLSFTVTDINSTVTKLMAMGAELDGPIK 94
          KGYSSLLSFTVTDIN+TVTKLMA+GAELDG IK
Sbjct: 61 KGYSSLLSFTVTDINTTVTKLMALGAELDGTIK 93

BLAST of CmoCh04G031100 vs. TAIR10
Match: AT1G64185.1 (AT1G64185.1 Lactoylglutathione lyase / glyoxalase I family protein)

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-36
Identity = 70/94 (74.47%), Postives = 86/94 (91.49%), Query Frame = 1

Query: 1  MAAASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQS-NDHIVQ 60
          MA ASF+WILQLH+DVP+AARFY +GLDF+V+V TLRWAELQSGPLKLALMQ+ ++H++ 
Sbjct: 1  MATASFRWILQLHRDVPKAARFYEKGLDFSVNVVTLRWAELQSGPLKLALMQAPSEHVMS 60

Query: 61 QKGYSSLLSFTVTDINSTVTKLMAMGAELDGPIK 94
          +KGYSSLLSFTV DIN+T++KLM +GAELDG IK
Sbjct: 61 EKGYSSLLSFTVADINTTISKLMELGAELDGSIK 94

BLAST of CmoCh04G031100 vs. NCBI nr
Match: gi|659081338|ref|XP_008441281.1| (PREDICTED: uncharacterized protein LOC103485457 isoform X6 [Cucumis melo])

HSP 1 Score: 182.2 bits (461), Expect = 6.9e-43
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 1

Query: 1  MAAASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQSNDHIVQQ 60
          MAAASF+WILQLHKDVP+AARFYSEGLDFTV+VCTLRWAELQSGPLKLALMQSNDHIVQQ
Sbjct: 1  MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSNDHIVQQ 60

Query: 61 KGYSSLLSFTVTDINSTVTKLMAMGAELDGPIK 94
          KGYSSLLSFTVTDINSTVTKLMAMGAELDG IK
Sbjct: 61 KGYSSLLSFTVTDINSTVTKLMAMGAELDGSIK 93

BLAST of CmoCh04G031100 vs. NCBI nr
Match: gi|778673139|ref|XP_011649931.1| (PREDICTED: uncharacterized protein LOC101214305 isoform X2 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 6.9e-43
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 1

Query: 1  MAAASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQSNDHIVQQ 60
          MAAASF+WILQLHKDVP+AARFYSEGLDFTV+VCTLRWAELQSGPLKLALMQSNDHIVQQ
Sbjct: 1  MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSNDHIVQQ 60

Query: 61 KGYSSLLSFTVTDINSTVTKLMAMGAELDGPIK 94
          KGYSSLLSFTVTDINSTVTKLMAMGAELDG IK
Sbjct: 61 KGYSSLLSFTVTDINSTVTKLMAMGAELDGSIK 93

BLAST of CmoCh04G031100 vs. NCBI nr
Match: gi|659081330|ref|XP_008441276.1| (PREDICTED: uncharacterized protein LOC103485457 isoform X2 [Cucumis melo])

HSP 1 Score: 182.2 bits (461), Expect = 6.9e-43
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 1

Query: 1   MAAASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQSNDHIVQQ 60
           MAAASF+WILQLHKDVP+AARFYSEGLDFTV+VCTLRWAELQSGPLKLALMQSNDHIVQQ
Sbjct: 108 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSNDHIVQQ 167

Query: 61  KGYSSLLSFTVTDINSTVTKLMAMGAELDGPIK 94
           KGYSSLLSFTVTDINSTVTKLMAMGAELDG IK
Sbjct: 168 KGYSSLLSFTVTDINSTVTKLMAMGAELDGSIK 200

BLAST of CmoCh04G031100 vs. NCBI nr
Match: gi|659081336|ref|XP_008441280.1| (PREDICTED: uncharacterized protein LOC103485457 isoform X5 [Cucumis melo])

HSP 1 Score: 182.2 bits (461), Expect = 6.9e-43
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 1

Query: 1   MAAASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQSNDHIVQQ 60
           MAAASF+WILQLHKDVP+AARFYSEGLDFTV+VCTLRWAELQSGPLKLALMQSNDHIVQQ
Sbjct: 12  MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSNDHIVQQ 71

Query: 61  KGYSSLLSFTVTDINSTVTKLMAMGAELDGPIK 94
           KGYSSLLSFTVTDINSTVTKLMAMGAELDG IK
Sbjct: 72  KGYSSLLSFTVTDINSTVTKLMAMGAELDGSIK 104

BLAST of CmoCh04G031100 vs. NCBI nr
Match: gi|659081328|ref|XP_008441275.1| (PREDICTED: uncharacterized protein LOC103485457 isoform X1 [Cucumis melo])

HSP 1 Score: 182.2 bits (461), Expect = 6.9e-43
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 1

Query: 1   MAAASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQSNDHIVQQ 60
           MAAASF+WILQLHKDVP+AARFYSEGLDFTV+VCTLRWAELQSGPLKLALMQSNDHIVQQ
Sbjct: 130 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSNDHIVQQ 189

Query: 61  KGYSSLLSFTVTDINSTVTKLMAMGAELDGPIK 94
           KGYSSLLSFTVTDINSTVTKLMAMGAELDG IK
Sbjct: 190 KGYSSLLSFTVTDINSTVTKLMAMGAELDGSIK 222

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LQS3_CUCSA4.8e-4395.70Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404930 PE=4 SV=1[more]
F6HUQ4_VITVI6.1e-3887.91Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00850 PE=4 SV=... [more]
A9PA49_POPTR8.0e-3887.91Lactoylglutathione lyase family protein OS=Populus trichocarpa GN=POPTR_0003s134... [more]
B9RCL3_RICCO1.8e-3788.30Catalytic, putative OS=Ricinus communis GN=RCOM_1689770 PE=4 SV=1[more]
A0A103Y7B5_CYNCS6.7e-3782.61Glyoxalase-like domain-containing protein OS=Cynara cardunculus var. scolymus GN... [more]
Match NameE-valueIdentityDescription
AT5G41650.12.1e-3778.49 Lactoylglutathione lyase / glyoxalase I family protein[more]
AT1G64185.12.3e-3674.47 Lactoylglutathione lyase / glyoxalase I family protein[more]
Match NameE-valueIdentityDescription
gi|659081338|ref|XP_008441281.1|6.9e-4395.70PREDICTED: uncharacterized protein LOC103485457 isoform X6 [Cucumis melo][more]
gi|778673139|ref|XP_011649931.1|6.9e-4395.70PREDICTED: uncharacterized protein LOC101214305 isoform X2 [Cucumis sativus][more]
gi|659081330|ref|XP_008441276.1|6.9e-4395.70PREDICTED: uncharacterized protein LOC103485457 isoform X2 [Cucumis melo][more]
gi|659081336|ref|XP_008441280.1|6.9e-4395.70PREDICTED: uncharacterized protein LOC103485457 isoform X5 [Cucumis melo][more]
gi|659081328|ref|XP_008441275.1|6.9e-4395.70PREDICTED: uncharacterized protein LOC103485457 isoform X1 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016829 lyase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G031100.1CmoCh04G031100.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31071FAMILY NOT NAMEDcoord: 1..93
score: 1.3