CmoCh04G028330 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G028330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr04 : 20263607 .. 20264101 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAAGCCCATCTCCACCCACGCGTCGTCGGAGATTCCCCGTCGATGATGGGGTCGATCTAATTGACTGCTCCGGCAAGCATTGCCGGTCTTGCACTGCTGGCTTGGTGGCTGATTGTGTCGCTGTCTGCTGCTGCCCCTGTTCCGTGGTTAGCTTCTTGGCTCTGGCCCTCGTCAAATTGCCGTGGATGATTGGCCGGCGGTGTCTGCAACGGGCGAGGAAGAAGAGGAAGTTGATTCGCCGAAAAAGGGAATGCGATGGCGCTGCGGCTGCGTCGGAAACTGCTTTGGGTCTGGCGAGGGAGGAAGGGCTGCCGGAAATTGTGCCGGGGTCCGTCGAGGAAGAAGAAGAAGAAGAAGAAGGGGTGGGGAATTTTAGTGCGAGATTTGAAGCAGAAAGAATTTGGTTGCAGTTGTATCAACTGGGTCAGTTGGGTTTTGGAAGAGTTTCTTTCACTGGGAATTCAAATCAATGGCCAAATTCCAATTAA

mRNA sequence

ATGGAAGAAAGCCCATCTCCACCCACGCGTCGTCGGAGATTCCCCGTCGATGATGGGGTCGATCTAATTGACTGCTCCGGCAAGCATTGCCGGTCTTGCACTGCTGGCTTGGTGGCTGATTGTGTCGCTGTCTGCTGCTGCCCCTGTTCCGTGGTTAGCTTCTTGGCTCTGGCCCTCGTCAAATTGCCGTGGATGATTGGCCGGCGGTGTCTGCAACGGGCGAGGAAGAAGAGGAAGTTGATTCGCCGAAAAAGGGAATGCGATGGCGCTGCGGCTGCGTCGGAAACTGCTTTGGGTCTGGCGAGGGAGGAAGGGCTGCCGGAAATTGTGCCGGGGTCCGTCGAGGAAGAAGAAGAAGAAGAAGAAGGGGTGGGGAATTTTAGTGCGAGATTTGAAGCAGAAAGAATTTGGTTGCAGTTGTATCAACTGGGTCAGTTGGGTTTTGGAAGAGTTTCTTTCACTGGGAATTCAAATCAATGGCCAAATTCCAATTAA

Coding sequence (CDS)

ATGGAAGAAAGCCCATCTCCACCCACGCGTCGTCGGAGATTCCCCGTCGATGATGGGGTCGATCTAATTGACTGCTCCGGCAAGCATTGCCGGTCTTGCACTGCTGGCTTGGTGGCTGATTGTGTCGCTGTCTGCTGCTGCCCCTGTTCCGTGGTTAGCTTCTTGGCTCTGGCCCTCGTCAAATTGCCGTGGATGATTGGCCGGCGGTGTCTGCAACGGGCGAGGAAGAAGAGGAAGTTGATTCGCCGAAAAAGGGAATGCGATGGCGCTGCGGCTGCGTCGGAAACTGCTTTGGGTCTGGCGAGGGAGGAAGGGCTGCCGGAAATTGTGCCGGGGTCCGTCGAGGAAGAAGAAGAAGAAGAAGAAGGGGTGGGGAATTTTAGTGCGAGATTTGAAGCAGAAAGAATTTGGTTGCAGTTGTATCAACTGGGTCAGTTGGGTTTTGGAAGAGTTTCTTTCACTGGGAATTCAAATCAATGGCCAAATTCCAATTAA

Homology

[Close]

BLAST of CmoCh04G028330 vs. TrEMBL
Match: A0A0A0KR58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G524770 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 5.3e-64
Identity = 132/167 (79.04%), Postives = 142/167 (85.03%), Query Frame = 1


Query: 1   MEESPSPPTRRRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 86  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 145

Query: 61  KLPWMIGRRCLQRA---RKKRKLIRRKRECDGAAAASETALGLAREEGLPEIVPGSVEEE 120
           KLPWM+GRRCLQ+A   RKKRKL+ R+ ECDGA AA ET   +  E+GLPE+ PGS    
Sbjct: 146 KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATAA-ETGGCVGNEKGLPEVSPGS---- 205

Query: 121 EEEEEGVGNFSARFEAERIWLQLYQLGQLGFGRVSFTGNSNQWPNSN 165
            EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Sbjct: 206 GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 247

[Close]

BLAST of CmoCh04G028330 vs. TrEMBL
Match: A0A061EJE0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_016896 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-38
Identity = 87/161 (54.04%), Postives = 111/161 (68.94%), Query Frame = 1


Query: 8   PTRRRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMIG 67
           PT + R+ VD+G D I+CSGK+CRSCTAG++ADCVA+CCCPC+V+  L LALVK+PW +G
Sbjct: 16  PTWKSRYAVDEGGDFIECSGKYCRSCTAGVIADCVALCCCPCAVLDLLTLALVKVPWKMG 75

Query: 68  RRCLQRARKKRKLIRRKRECDGAAAASETALG-------------LAREEGLPEIVPGSV 127
           RRCL   +KKRK +  KR+C  +     T+ G             +  EEG+ E      
Sbjct: 76  RRCLGLGKKKRKKVEMKRKCKTSCCCCSTSGGGDHQVGDGNLRERVRVEEGMWEFPTAFG 135

Query: 128 EEEEEEEEGVGNFSARFEAERIWLQLYQLGQLGFGRVSFTG 156
           EE+EEE   +GN SARFEAER+WL+LYQ+G LGFGRVSFTG
Sbjct: 136 EEKEEE---IGNLSARFEAERVWLELYQVGHLGFGRVSFTG 173

[Close]

BLAST of CmoCh04G028330 vs. TrEMBL
Match: F6HUY9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01140 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-35
Identity = 83/147 (56.46%), Postives = 109/147 (74.15%), Query Frame = 1


Query: 11  RRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMIGRRC 70
           + R+ V+DG DLI+CSGK+CRSCTAGL ADCVA+CCCPC+VV+ LALALVK+PWM+GRRC
Sbjct: 25  KSRYAVEDGGDLIECSGKYCRSCTAGLFADCVAICCCPCAVVNLLALALVKIPWMMGRRC 84

Query: 71  LQRARKKRKLIR--RKRECDGAAAASETALGLAREEGLPEIVPGSVEEEEEEEEGVGNFS 130
           L   ++K ++ R  +K E +       +      +EG  +I+ G  EEEEE+E+     S
Sbjct: 85  LGLGKRKLEMKRKCKKNEIEFVIERDGSLRNGRADEGTSDILYGVGEEEEEKEKA----S 144

Query: 131 ARFEAERIWLQLYQLGQLGFGRVSFTG 156
           ARFEA+R+WL+LYQ+G LGFGRVSFTG
Sbjct: 145 ARFEADRVWLELYQVGHLGFGRVSFTG 167

[Close]

BLAST of CmoCh04G028330 vs. TrEMBL
Match: B9GHQ4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s34870g PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.8e-35
Identity = 86/166 (51.81%), Postives = 109/166 (65.66%), Query Frame = 1


Query: 2   EESPSPPTRRRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVK 61
           E S   PTR+ R  VD+G DLI+CS KHC+SCTAGLVADCVA+CCCPC++V+ L LA VK
Sbjct: 16  EVSRGGPTRKSRHAVDEGGDLIECSSKHCQSCTAGLVADCVALCCCPCALVNLLTLAFVK 75

Query: 62  LPWMIGRRCLQRARKKRKLIRRKREC-------DGAAAASETALGLAR----EEGLPEIV 121
           +PWMIGRRCL R ++K+  +  KR+C           A  E    L +    EEG+  I 
Sbjct: 76  VPWMIGRRCLGRVKRKKMKLEIKRKCRKNSEGEGNTVAQRERDCNLRKRMIEEEGVLGIA 135

Query: 122 PGSVEEEEEEEEGVGNFSARFEAERIWLQLYQLGQLGFGRVSFTGN 157
            G  EEEE     + + +AR+EAER+W +L Q+G LGFGRVSFT N
Sbjct: 136 TGFGEEEE-----MASVTARYEAERLWFELNQIGHLGFGRVSFTDN 176

[Close]

BLAST of CmoCh04G028330 vs. TrEMBL
Match: B9SF83_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1095440 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.7e-34
Identity = 90/176 (51.14%), Postives = 115/176 (65.34%), Query Frame = 1


Query: 7   PPTRRRR-----FPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVK 66
           P TRR+        VD+G DLI+CSGK+CRSCTAGL+ADCVA+CCCPC++V+ LALA VK
Sbjct: 26  PTTRRKNRYNTSSTVDEGGDLIECSGKYCRSCTAGLIADCVALCCCPCALVNLLALAFVK 85

Query: 67  LPWMIGRRCLQRARKKRK--LIRRKRECDGAAA----------ASETALGLAR------- 126
           +PWM+GR+CL R +KKRK    R+KR+C  + +           S T+    R       
Sbjct: 86  VPWMVGRKCLGRVKKKRKSSSTRKKRKCKKSCSLEVTEAQGHDQSNTSADDGRDGNLKYR 145

Query: 127 --EEGLPEIVPGSVEEEEEEEEGVGNFSARFEA-ERIWLQLYQLGQLGFGRVSFTG 156
             E+G+ EIV     EE++E    G  SARFEA E++WL+LYQ G LGFGRVSFTG
Sbjct: 146 GAEDGILEIVIDGFGEEDDETSHGGGVSARFEAVEKVWLELYQDGHLGFGRVSFTG 201

[Close]

BLAST of CmoCh04G028330 vs. TAIR10
Match: AT5G14690.1 (AT5G14690.1 unknown protein)

HSP 1 Score: 115.2 bits (287), Expect = 3.9e-26
Identity = 77/188 (40.96%), Postives = 97/188 (51.60%), Query Frame = 1


Query: 10  RRRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMIGRR 69
           RRRR       D + CS K CRS  A  +ADCVA+CCCPC++++ L L LVK+PWMIGRR
Sbjct: 28  RRRRHNHHTHGDEVKCSSKRCRSWAAAAIADCVALCCCPCAIINLLTLTLVKVPWMIGRR 87

Query: 70  CLQ---RARKKRKLIRRKR---------------------------ECDGAAAASETALG 129
           CL    R +KKR++I R++                           E  G         G
Sbjct: 88  CLGGGGRNKKKRRVIHRRKRRGNINGEDEFYHHNNHHRRFETAEEGEKCGCGGGGGGCYG 147

Query: 130 LAREEGLPEIVP--GSVEEEEEEEEGV----------GNFSARFEAERIWLQLYQLGQLG 156
               +    +V   GS+ +EEEEEE               SAR EAER+WL+LYQ+G LG
Sbjct: 148 GGDYDDHRFVVERDGSLTKEEEEEERTTSCKGEDHDESRISARVEAERVWLELYQIGHLG 207

[Close]

BLAST of CmoCh04G028330 vs. TAIR10
Match: AT3G01516.1 (AT3G01516.1 unknown protein)

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-24
Identity = 67/152 (44.08%), Postives = 85/152 (55.92%), Query Frame = 1


Query: 25  CSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMIGRRCLQR---ARKKRKLI 84
           CSGK CRS  A  +ADCVA+CCCPC+VV+   LA VK+PWMIGR+C+ R   ++K+ K I
Sbjct: 33  CSGKRCRSWAAAAIADCVALCCCPCAVVNIFTLAFVKVPWMIGRKCIGRGGPSKKRMKKI 92

Query: 85  RRK-------------RECDGAAAASETALGLAREEGLPEIVPGSVEEEEE-----EEEG 144
            R+                 G         G   +        GS+ +EE      +EE 
Sbjct: 93  NREDRFHHHHHHRRSAEMVSGGCCGGGDGDGEFDDHRFVVERDGSLTKEEAKTASLKEEE 152

Query: 145 VGNFSARFEAERIWLQLYQLGQLGFGRVSFTG 156
               SAR EAER+WL+LYQ+G LGFGRVSFTG
Sbjct: 153 ETRISARVEAERVWLELYQIGHLGFGRVSFTG 184

[Close]

BLAST of CmoCh04G028330 vs. NCBI nr
Match: gi|659117755|ref|XP_008458772.1| (PREDICTED: uncharacterized protein LOC103498078 [Cucumis melo])

HSP 1 Score: 255.0 bits (650), Expect = 9.0e-65
Identity = 134/167 (80.24%), Postives = 143/167 (85.63%), Query Frame = 1


Query: 1   MEESPSPPTRRRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 1   MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60

Query: 61  KLPWMIGRRCLQRA---RKKRKLIRRKRECDGAAAASETALGLAREEGLPEIVPGSVEEE 120
           KLPWM+GRRCLQ+A   RKKRKL+RR+ ECDGA AA ET   +  E+GLPEI PGS    
Sbjct: 61  KLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAA-ETGGCVGNEKGLPEISPGS---- 120

Query: 121 EEEEEGVGNFSARFEAERIWLQLYQLGQLGFGRVSFTGNSNQWPNSN 165
            EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Sbjct: 121 GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 162

[Close]

BLAST of CmoCh04G028330 vs. NCBI nr
Match: gi|778703719|ref|XP_011655414.1| (PREDICTED: uncharacterized protein LOC105435525 [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 7.6e-64
Identity = 132/167 (79.04%), Postives = 142/167 (85.03%), Query Frame = 1


Query: 1   MEESPSPPTRRRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 1   MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60

Query: 61  KLPWMIGRRCLQRA---RKKRKLIRRKRECDGAAAASETALGLAREEGLPEIVPGSVEEE 120
           KLPWM+GRRCLQ+A   RKKRKL+ R+ ECDGA AA ET   +  E+GLPE+ PGS    
Sbjct: 61  KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATAA-ETGGCVGNEKGLPEVSPGS---- 120

Query: 121 EEEEEGVGNFSARFEAERIWLQLYQLGQLGFGRVSFTGNSNQWPNSN 165
            EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Sbjct: 121 GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 162

[Close]

BLAST of CmoCh04G028330 vs. NCBI nr
Match: gi|700196207|gb|KGN51384.1| (hypothetical protein Csa_5G524770 [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 7.6e-64
Identity = 132/167 (79.04%), Postives = 142/167 (85.03%), Query Frame = 1


Query: 1   MEESPSPPTRRRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 86  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 145

Query: 61  KLPWMIGRRCLQRA---RKKRKLIRRKRECDGAAAASETALGLAREEGLPEIVPGSVEEE 120
           KLPWM+GRRCLQ+A   RKKRKL+ R+ ECDGA AA ET   +  E+GLPE+ PGS    
Sbjct: 146 KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATAA-ETGGCVGNEKGLPEVSPGS---- 205

Query: 121 EEEEEGVGNFSARFEAERIWLQLYQLGQLGFGRVSFTGNSNQWPNSN 165
            EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Sbjct: 206 GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 247

[Close]

BLAST of CmoCh04G028330 vs. NCBI nr
Match: gi|590645953|ref|XP_007031487.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 167.2 bits (422), Expect = 2.5e-38
Identity = 87/161 (54.04%), Postives = 111/161 (68.94%), Query Frame = 1


Query: 8   PTRRRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMIG 67
           PT + R+ VD+G D I+CSGK+CRSCTAG++ADCVA+CCCPC+V+  L LALVK+PW +G
Sbjct: 16  PTWKSRYAVDEGGDFIECSGKYCRSCTAGVIADCVALCCCPCAVLDLLTLALVKVPWKMG 75

Query: 68  RRCLQRARKKRKLIRRKRECDGAAAASETALG-------------LAREEGLPEIVPGSV 127
           RRCL   +KKRK +  KR+C  +     T+ G             +  EEG+ E      
Sbjct: 76  RRCLGLGKKKRKKVEMKRKCKTSCCCCSTSGGGDHQVGDGNLRERVRVEEGMWEFPTAFG 135

Query: 128 EEEEEEEEGVGNFSARFEAERIWLQLYQLGQLGFGRVSFTG 156
           EE+EEE   +GN SARFEAER+WL+LYQ+G LGFGRVSFTG
Sbjct: 136 EEKEEE---IGNLSARFEAERVWLELYQVGHLGFGRVSFTG 173

[Close]

BLAST of CmoCh04G028330 vs. NCBI nr
Match: gi|225452436|ref|XP_002277432.1| (PREDICTED: uncharacterized protein LOC100247380 [Vitis vinifera])

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-35
Identity = 83/147 (56.46%), Postives = 109/147 (74.15%), Query Frame = 1


Query: 11  RRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMIGRRC 70
           + R+ V+DG DLI+CSGK+CRSCTAGL ADCVA+CCCPC+VV+ LALALVK+PWM+GRRC
Sbjct: 25  KSRYAVEDGGDLIECSGKYCRSCTAGLFADCVAICCCPCAVVNLLALALVKIPWMMGRRC 84

Query: 71  LQRARKKRKLIR--RKRECDGAAAASETALGLAREEGLPEIVPGSVEEEEEEEEGVGNFS 130
           L   ++K ++ R  +K E +       +      +EG  +I+ G  EEEEE+E+     S
Sbjct: 85  LGLGKRKLEMKRKCKKNEIEFVIERDGSLRNGRADEGTSDILYGVGEEEEEKEKA----S 144

Query: 131 ARFEAERIWLQLYQLGQLGFGRVSFTG 156
           ARFEA+R+WL+LYQ+G LGFGRVSFTG
Sbjct: 145 ARFEADRVWLELYQVGHLGFGRVSFTG 167

The following BLAST results are available for this feature:

BLAST of CmoCh04G028330 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G028330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR58_CUCSA	5.3e-64	79.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G524770 PE=4 SV=1	[more]
A0A061EJE0_THECC	1.7e-38	54.04	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_016896 PE=4 SV=1	[more]
F6HUY9_VITVI	1.0e-35	56.46	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01140 PE=4 SV=...	[more]
B9GHQ4_POPTR	6.8e-35	51.81	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s34870g PE=4 SV=1	[more]
B9SF83_RICCO	5.7e-34	51.14	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1095440 PE=4 SV=1	[more]

BLAST of CmoCh04G028330 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G14690.1	3.9e-26	40.96	unknown protein	[more]
AT3G01516.1	4.8e-24	44.08	unknown protein	[more]

BLAST of CmoCh04G028330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117755\|ref\|XP_008458772.1\|	9.0e-65	80.24	PREDICTED: uncharacterized protein LOC103498078 [Cucumis melo]	[more]
gi\|778703719\|ref\|XP_011655414.1\|	7.6e-64	79.04	PREDICTED: uncharacterized protein LOC105435525 [Cucumis sativus]	[more]
gi\|700196207\|gb\|KGN51384.1\|	7.6e-64	79.04	hypothetical protein Csa_5G524770 [Cucumis sativus]	[more]
gi\|590645953\|ref\|XP_007031487.1\|	2.5e-38	54.04	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|225452436\|ref\|XP_002277432.1\|	1.5e-35	56.46	PREDICTED: uncharacterized protein LOC100247380 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G028330.1	CmoCh04G028330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33264	FAMILY NOT NAMED	coord: 2..159 score: 8.5
None	No IPR available	PANTHER	PTHR33264:SF6	SUBFAMILY NOT NAMED	coord: 2..159 score: 8.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G028330	Cucsa.011480	Cucumber (Gy14) v1	cgycmoB0544
CmoCh04G028330	Cla010409	Watermelon (97103) v1	cmowmB646
CmoCh04G028330	Csa5G524770	Cucumber (Chinese Long) v2	cmocuB716
CmoCh04G028330	MELO3C021551	Melon (DHL92) v3.5.1	cmomeB624
CmoCh04G028330	ClCG09G019030	Watermelon (Charleston Gray)	cmowcgB608
CmoCh04G028330	CSPI05G18420	Wild cucumber (PI 183967)	cmocpiB724
CmoCh04G028330	Cp4.1LG01g23350	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G028330	MELO3C021551.2	Melon (DHL92) v3.6.1	cmomedB713
CmoCh04G028330	CsaV3_5G027330	Cucumber (Chinese Long) v3	cmocucB0848
CmoCh04G028330	Cla97C09G180500	Watermelon (97103) v2	cmowmbB772
CmoCh04G028330	Bhi06G000436	Wax gourd	cmowgoB0836
CmoCh04G028330	CsGy5G018060	Cucumber (Gy14) v2	cgybcmoB626
CmoCh04G028330	Carg04439	Silver-seed gourd	carcmoB0940

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G028330	Silver-seed gourd	carcmoB0370
CmoCh04G028330	Silver-seed gourd	carcmoB0501
CmoCh04G028330	Silver-seed gourd	carcmoB0506
CmoCh04G028330	Silver-seed gourd	carcmoB0593
CmoCh04G028330	Silver-seed gourd	carcmoB1354
CmoCh04G028330	Cucumber (Chinese Long) v3	cmocucB0801
CmoCh04G028330	Cucumber (Chinese Long) v3	cmocucB0802
CmoCh04G028330	Cucumber (Chinese Long) v3	cmocucB0824
CmoCh04G028330	Watermelon (97103) v2	cmowmbB685
CmoCh04G028330	Wax gourd	cmowgoB0812
CmoCh04G028330	Cucurbita moschata (Rifu)	cmocmoB073
CmoCh04G028330	Cucurbita moschata (Rifu)	cmocmoB122
CmoCh04G028330	Cucurbita moschata (Rifu)	cmocmoB123
CmoCh04G028330	Cucurbita moschata (Rifu)	cmocmoB185
CmoCh04G028330	Cucurbita moschata (Rifu)	cmocmoB220
CmoCh04G028330	Cucurbita moschata (Rifu)	cmocmoB261
CmoCh04G028330	Cucumber (Gy14) v1	cgycmoB0207
CmoCh04G028330	Cucumber (Gy14) v1	cgycmoB0939
CmoCh04G028330	Cucurbita maxima (Rimu)	cmacmoB157
CmoCh04G028330	Cucurbita maxima (Rimu)	cmacmoB266
CmoCh04G028330	Cucurbita maxima (Rimu)	cmacmoB308
CmoCh04G028330	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G028330	Wild cucumber (PI 183967)	cmocpiB690
CmoCh04G028330	Wild cucumber (PI 183967)	cmocpiB705
CmoCh04G028330	Cucumber (Chinese Long) v2	cmocuB695
CmoCh04G028330	Melon (DHL92) v3.5.1	cmomeB660
CmoCh04G028330	Melon (DHL92) v3.5.1	cmomeB677
CmoCh04G028330	Watermelon (Charleston Gray)	cmowcgB611
CmoCh04G028330	Watermelon (97103) v1	cmowmB650
CmoCh04G028330	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G028330	Cucurbita pepo (Zucchini)	cmocpeB696
CmoCh04G028330	Cucurbita pepo (Zucchini)	cmocpeB701
CmoCh04G028330	Cucurbita pepo (Zucchini)	cmocpeB704
CmoCh04G028330	Bottle gourd (USVL1VR-Ls)	cmolsiB640
CmoCh04G028330	Bottle gourd (USVL1VR-Ls)	cmolsiB641
CmoCh04G028330	Bottle gourd (USVL1VR-Ls)	cmolsiB647
CmoCh04G028330	Bottle gourd (USVL1VR-Ls)	cmolsiB688
CmoCh04G028330	Cucumber (Gy14) v2	cgybcmoB121
CmoCh04G028330	Cucumber (Gy14) v2	cgybcmoB122
CmoCh04G028330	Cucumber (Gy14) v2	cgybcmoB395
CmoCh04G028330	Melon (DHL92) v3.6.1	cmomedB747
CmoCh04G028330	Melon (DHL92) v3.6.1	cmomedB766