CmoCh04G028180 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G028180
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCmo_Chr04 : 20201343 .. 20203259 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCGAATTCCCGCTTCGAATCTCACCAAACTCTCGAAGCCCTTCGTCTTCCTCGCTTCAATTCCCAAGTCAAATTTCTCTTCTGCTTCATCCTCAACATTTTTACCATCAATTCCTCGGTCCGAAACTAAATTAATCGTCAACCCTCTTTACCATTTTCTCCCACAAAACCAAAACCCCTTCAACATCGTCGAACTCGTCTCCTCGCACCTCAAAACCAGCAACACAAACTTATCCCTTCTTCAATCCGACATTAAGGAGCTTCTTCCTCACTTGGGTCATCGTGAAGTCTCCAAGATTATATTGAGGTGCCAATCTAATTTCGTCTCTGTTCTTGCTTTTTTCAATTGGGTTAAATTTGATTTGGGGATTACACTTAGTTCTCAAAACTATTGTCTTATTATCCATATATTAGCATGGTCCCGACAATTTTCCATGGCGATGAAATTCTTGTCTGAATTGATTGAGTTGTCTAAGGATAATGCCTCAGGTAGTGAGGATGTTTTTCATAATCTGGTATTGTGCACTGAGCACTGTAATTGGAATCCTGTTATCTTTGAAATGCTTATTAAGGCGTATGTGAAAGTTCATATGATTCAGGAAAGTTATGAGAGCTTTAAGAAGATGGTGAAGATGGGTTTTGTTCCAAGTGTGATTGCTTGTAATTGTATTCTAAATGGACTGGCGAAGATGAAGTGTGATGCTCAATGTTGGGAACTCTATGAAGAAATGGGAAGGATTGGAGTTCACTCAAATGCATATACTTTTAATATTTTGACTTATGTTTTGTGTAGAGTTGGGGATGTGAATAAGGTTAATGAGTTCTTAGAAAAGATGGAAGAAGAGGGTTTCGATCCCGACGTCGTGACGTACAATACTTTGATCAATAGCTATTGTCGAAGAGGAAGATTAGATGATGCATTCTATTTATATAGGATAATGTTTAGAAGGGGTGTGATGCCCGATCTTGTTTCATATACTTCCTTGATGAATGGTCTTTGTAAGTTAGGAAGGGTAAGAGAGGCCCATCAGCTATTTCATCGAATGATCGATCGAGAATTGGATCCCGATGTCGTATTGTATAATACGCTAATTAATGCATATTGCAAGGATGGAAGGCTGCAAGAGGCAAGATCATTGCTACACGATATGACTCGAATTGGCATTTGCCCTGATAGTTTCACTTGTAGGATTATGGTGGAAGGATATGGAAGAGGAGGTAGGTTGATCTCAGCTTTGAATTTGGTTGTCGAACTTCGGAAACTTGGAACGATTGTTACTTACGAGATATATGATTATCTTATCGTGTCGTTGTGTCTGGAAGATCGTCCATTTGCAGCTAAGAGTGTTCTTGAAAGAATCATTAAAGATGGTTTCCAACCTAATGCTTGTATCTACAACAAGCTGATTGAATCTTTCTGCAGAGTTCATAATGTTTCTGAAGCACTGCTTTTGAAATCTGAAATGGTAAAGAGAAATTTTAAACTTAGCATTGATTCATACAAGCCTCTTATATCCTGTTTGTGTGGAATCAATAGAAGTGTAGATGGTGAAGGTTTAATGGTAGAAATGGTTGAATCTGGAGTGCTTCCGGATCATCAAATATGCAGAGTATTGATAAATGGATACTGCAAAGAAGGGAATGTTTATAAAGCAGAATCATTATTGGTATCATTTGCTAAAGATTTTGAGTTCTTTGACACTGAAAGTTTCAATGCCTTGGTTAAATTTCATCGCGATTTTGGTAATGAAACGGAGTTGATGCAGCTACAAGATCGAATGCTGAAAGTCGGTTTCGTTCCGAATAGCTTAACGTGCCGATACGTTATCCATGGATTATGGAAATCTGCAAGGCTCGACAAGAGGAGAGTTCAGGCTCCTCTTTGCCAAAGAGGGCGACATATAGATATGTGA

mRNA sequence

ATGCATCGAATTCCCGCTTCGAATCTCACCAAACTCTCGAAGCCCTTCGTCTTCCTCGCTTCAATTCCCAAGTCAAATTTCTCTTCTGCTTCATCCTCAACATTTTTACCATCAATTCCTCGGTCCGAAACTAAATTAATCGTCAACCCTCTTTACCATTTTCTCCCACAAAACCAAAACCCCTTCAACATCGTCGAACTCGTCTCCTCGCACCTCAAAACCAGCAACACAAACTTATCCCTTCTTCAATCCGACATTAAGGAGCTTCTTCCTCACTTGGGTCATCGTGAAGTCTCCAAGATTATATTGAGGTGCCAATCTAATTTCGTCTCTGTTCTTGCTTTTTTCAATTGGGTTAAATTTGATTTGGGGATTACACTTAGTTCTCAAAACTATTGTCTTATTATCCATATATTAGCATGGTCCCGACAATTTTCCATGGCGATGAAATTCTTGTCTGAATTGATTGAGTTGTCTAAGGATAATGCCTCAGGTAGTGAGGATGTTTTTCATAATCTGGTATTGTGCACTGAGCACTGTAATTGGAATCCTGTTATCTTTGAAATGCTTATTAAGGCGTATGTGAAAGTTCATATGATTCAGGAAAGTTATGAGAGCTTTAAGAAGATGGTGAAGATGGGTTTTGTTCCAAGTGTGATTGCTTGTAATTGTATTCTAAATGGACTGGCGAAGATGAAGTGTGATGCTCAATGTTGGGAACTCTATGAAGAAATGGGAAGGATTGGAGTTCACTCAAATGCATATACTTTTAATATTTTGACTTATGTTTTGTGTAGAGTTGGGGATGTGAATAAGGTTAATGAGTTCTTAGAAAAGATGGAAGAAGAGGGTTTCGATCCCGACGTCGTGACGTACAATACTTTGATCAATAGCTATTGTCGAAGAGGAAGATTAGATGATGCATTCTATTTATATAGGATAATGTTTAGAAGGGGTGTGATGCCCGATCTTGTTTCATATACTTCCTTGATGAATGGTCTTTGTAAGTTAGGAAGGGTAAGAGAGGCCCATCAGCTATTTCATCGAATGATCGATCGAGAATTGGATCCCGATGTCGTATTGTATAATACGCTAATTAATGCATATTGCAAGGATGGAAGGCTGCAAGAGGCAAGATCATTGCTACACGATATGACTCGAATTGGCATTTGCCCTGATAGTTTCACTTGTAGGATTATGGTGGAAGGATATGGAAGAGGAGGTAGGTTGATCTCAGCTTTGAATTTGGTTGTCGAACTTCGGAAACTTGGAACGATTGTTACTTACGAGATATATGATTATCTTATCGTGTCGTTGTGTCTGGAAGATCGTCCATTTGCAGCTAAGAGTGTTCTTGAAAGAATCATTAAAGATGGTTTCCAACCTAATGCTTGTATCTACAACAAGCTGATTGAATCTTTCTGCAGAGTTCATAATGTTTCTGAAGCACTGCTTTTGAAATCTGAAATGGTAAAGAGAAATTTTAAACTTAGCATTGATTCATACAAGCCTCTTATATCCTGTTTGTGTGGAATCAATAGAAGTGTAGATGGTGAAGGTTTAATGGTAGAAATGGTTGAATCTGGAGTGCTTCCGGATCATCAAATATGCAGAGTATTGATAAATGGATACTGCAAAGAAGGGAATGTTTATAAAGCAGAATCATTATTGGTATCATTTGCTAAAGATTTTGAGTTCTTTGACACTGAAAGTTTCAATGCCTTGGTTAAATTTCATCGCGATTTTGGTAATGAAACGGAGTTGATGCAGCTACAAGATCGAATGCTGAAAGTCGGTTTCGTTCCGAATAGCTTAACGTGCCGATACGTTATCCATGGATTATGGAAATCTGCAAGGCTCGACAAGAGGAGAGTTCAGGCTCCTCTTTGCCAAAGAGGGCGACATATAGATATGTGA

Coding sequence (CDS)

ATGCATCGAATTCCCGCTTCGAATCTCACCAAACTCTCGAAGCCCTTCGTCTTCCTCGCTTCAATTCCCAAGTCAAATTTCTCTTCTGCTTCATCCTCAACATTTTTACCATCAATTCCTCGGTCCGAAACTAAATTAATCGTCAACCCTCTTTACCATTTTCTCCCACAAAACCAAAACCCCTTCAACATCGTCGAACTCGTCTCCTCGCACCTCAAAACCAGCAACACAAACTTATCCCTTCTTCAATCCGACATTAAGGAGCTTCTTCCTCACTTGGGTCATCGTGAAGTCTCCAAGATTATATTGAGGTGCCAATCTAATTTCGTCTCTGTTCTTGCTTTTTTCAATTGGGTTAAATTTGATTTGGGGATTACACTTAGTTCTCAAAACTATTGTCTTATTATCCATATATTAGCATGGTCCCGACAATTTTCCATGGCGATGAAATTCTTGTCTGAATTGATTGAGTTGTCTAAGGATAATGCCTCAGGTAGTGAGGATGTTTTTCATAATCTGGTATTGTGCACTGAGCACTGTAATTGGAATCCTGTTATCTTTGAAATGCTTATTAAGGCGTATGTGAAAGTTCATATGATTCAGGAAAGTTATGAGAGCTTTAAGAAGATGGTGAAGATGGGTTTTGTTCCAAGTGTGATTGCTTGTAATTGTATTCTAAATGGACTGGCGAAGATGAAGTGTGATGCTCAATGTTGGGAACTCTATGAAGAAATGGGAAGGATTGGAGTTCACTCAAATGCATATACTTTTAATATTTTGACTTATGTTTTGTGTAGAGTTGGGGATGTGAATAAGGTTAATGAGTTCTTAGAAAAGATGGAAGAAGAGGGTTTCGATCCCGACGTCGTGACGTACAATACTTTGATCAATAGCTATTGTCGAAGAGGAAGATTAGATGATGCATTCTATTTATATAGGATAATGTTTAGAAGGGGTGTGATGCCCGATCTTGTTTCATATACTTCCTTGATGAATGGTCTTTGTAAGTTAGGAAGGGTAAGAGAGGCCCATCAGCTATTTCATCGAATGATCGATCGAGAATTGGATCCCGATGTCGTATTGTATAATACGCTAATTAATGCATATTGCAAGGATGGAAGGCTGCAAGAGGCAAGATCATTGCTACACGATATGACTCGAATTGGCATTTGCCCTGATAGTTTCACTTGTAGGATTATGGTGGAAGGATATGGAAGAGGAGGTAGGTTGATCTCAGCTTTGAATTTGGTTGTCGAACTTCGGAAACTTGGAACGATTGTTACTTACGAGATATATGATTATCTTATCGTGTCGTTGTGTCTGGAAGATCGTCCATTTGCAGCTAAGAGTGTTCTTGAAAGAATCATTAAAGATGGTTTCCAACCTAATGCTTGTATCTACAACAAGCTGATTGAATCTTTCTGCAGAGTTCATAATGTTTCTGAAGCACTGCTTTTGAAATCTGAAATGGTAAAGAGAAATTTTAAACTTAGCATTGATTCATACAAGCCTCTTATATCCTGTTTGTGTGGAATCAATAGAAGTGTAGATGGTGAAGGTTTAATGGTAGAAATGGTTGAATCTGGAGTGCTTCCGGATCATCAAATATGCAGAGTATTGATAAATGGATACTGCAAAGAAGGGAATGTTTATAAAGCAGAATCATTATTGGTATCATTTGCTAAAGATTTTGAGTTCTTTGACACTGAAAGTTTCAATGCCTTGGTTAAATTTCATCGCGATTTTGGTAATGAAACGGAGTTGATGCAGCTACAAGATCGAATGCTGAAAGTCGGTTTCGTTCCGAATAGCTTAACGTGCCGATACGTTATCCATGGATTATGGAAATCTGCAAGGCTCGACAAGAGGAGAGTTCAGGCTCCTCTTTGCCAAAGAGGGCGACATATAGATATGTGA
BLAST of CmoCh04G028180 vs. Swiss-Prot
Match: PP409_ARATH (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana GN=At5g40400 PE=2 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 6.0e-173
Identity = 304/594 (51.18%), Postives = 420/594 (70.71%), Query Frame = 1

Query: 27  FSSASSSTFLPSIPRSET--KLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSL--L 86
           FSS SSS     +PR     K I+NPLY+ LPQ+QNP  IV+++ S L  S+ ++ L  L
Sbjct: 11  FSSYSSSI----VPRCSNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNL 70

Query: 87  QSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWS 146
           + ++K L+PHLG+ E+S+++LR QS+    + FF WVKFDLG   +  NYCL++HIL  S
Sbjct: 71  RDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSS 130

Query: 147 RQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQE 206
           ++F +AM+FL ELIEL+        DVF  LV  T+ CNW+PV+F+ML+K Y+K+ +++E
Sbjct: 131 KKFPLAMQFLCELIELTSKKEE--VDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEE 190

Query: 207 SYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILTY 266
            +  F++++  GF  SV+ CN +LNGL K+     CW++Y  M R+G+H N YTFNILT 
Sbjct: 191 GFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTN 250

Query: 267 VLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMP 326
           V C   +  +V++FLEKMEEEGF+PD+VTYNTL++SYCRRGRL +AFYLY+IM+RR V+P
Sbjct: 251 VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVP 310

Query: 327 DLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLL 386
           DLV+YTSL+ GLCK GRVREAHQ FHRM+DR + PD + YNTLI AYCK+G +Q+++ LL
Sbjct: 311 DLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLL 370

Query: 387 HDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLE 446
           H+M    + PD FTC+++VEG+ R GRL+SA+N VVELR+L   + +E+ D+LIVSLC E
Sbjct: 371 HEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQE 430

Query: 447 DRPFAAKSVLERII-KDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDS 506
            +PFAAK +L+RII ++G +     YN LIES  R   + EAL+LK ++  +N  L   +
Sbjct: 431 GKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKT 490

Query: 507 YKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFA 566
           Y+ LI CLC I R+ + E LM EM +S V PD  IC  L+ GYCKE +  KAE LL  FA
Sbjct: 491 YRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFA 550

Query: 567 KDFEFFDTESFNALVKFHRDFG-NETELMQLQDRMLKVGFVPNSLTCRYVIHGL 615
            +F  FD ES+N+LVK   + G    + ++LQ+RM ++GFVPN LTC+Y+I  L
Sbjct: 551 MEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598

BLAST of CmoCh04G028180 vs. Swiss-Prot
Match: PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 3.3e-62
Identity = 151/507 (29.78%), Postives = 243/507 (47.93%), Query Frame = 1

Query: 113 LAFFNWVKFDLGITLSS--QNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVF 172
           L F  WV    G+      Q  C+  HIL  +R +  A   L EL  +S      S  VF
Sbjct: 54  LKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS----GKSSFVF 113

Query: 173 HNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLA 232
             L+     CN NP ++++LI+ Y++  MIQ+S E F+ M   GF PSV  CN IL  + 
Sbjct: 114 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 173

Query: 233 KMKCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVV 292
           K   D   W   +EM +  +  +  TFNIL  VLC  G   K +  ++KME+ G+ P +V
Sbjct: 174 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 233

Query: 293 TYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRM 352
           TYNT+++ YC++GR   A  L   M  +GV  D+ +Y  L++ LC+  R+ + + L   M
Sbjct: 234 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 293

Query: 353 IDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRL 412
             R + P+ V YNTLIN +  +G++  A  LL++M   G+ P+  T   +++G+   G  
Sbjct: 294 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 353

Query: 413 ISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKL 472
             AL +   +   G   +   Y  L+  LC       A+    R+ ++G       Y  +
Sbjct: 354 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 413

Query: 473 IESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGV 532
           I+  C+   + EA++L +EM K      I +Y  LI+  C + R    + ++  +   G+
Sbjct: 414 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 473

Query: 533 LPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQ 592
            P+  I   LI   C+ G + +A  +  +   +    D  +FN LV      G   E  +
Sbjct: 474 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 533

Query: 593 LQDRMLKVGFVPNSLTCRYVIHGLWKS 618
               M   G +PN+++   +I+G   S
Sbjct: 534 FMRCMTSDGILPNTVSFDCLINGYGNS 556

BLAST of CmoCh04G028180 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-61
Identity = 151/525 (28.76%), Postives = 261/525 (49.71%), Query Frame = 1

Query: 99  SKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIEL 158
           S ++L+ Q++   +L F NW       TL  +  C+ +HIL   + +  A     ++   
Sbjct: 52  SNLLLKSQNDQALILKFLNWANPHQFFTLRCK--CITLHILTKFKLYKTAQILAEDVAAK 111

Query: 159 SKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPS 218
           + D+   S  VF +L    + C     +F++++K+Y ++ +I ++          GF+P 
Sbjct: 112 TLDDEYASL-VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPG 171

Query: 219 VIACNCILNGLAKMKCDAQCWE-LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFL 278
           V++ N +L+   + K +    E +++EM    V  N +T+NIL    C  G+++      
Sbjct: 172 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 231

Query: 279 EKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKL 338
           +KME +G  P+VVTYNTLI+ YC+  ++DD F L R M  +G+ P+L+SY  ++NGLC+ 
Sbjct: 232 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 291

Query: 339 GRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTC 398
           GR++E   +   M  R    D V YNTLI  YCK+G   +A  +  +M R G+ P   T 
Sbjct: 292 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 351

Query: 399 RIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIK 458
             ++    + G +  A+  + ++R  G       Y  L+     +     A  VL  +  
Sbjct: 352 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 411

Query: 459 DGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVD 518
           +GF P+   YN LI   C    + +A+ +  +M ++     + SY  ++S  C   RS D
Sbjct: 412 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC---RSYD 471

Query: 519 -GEGLMV--EMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNA 578
             E L V  EMVE G+ PD      LI G+C++    +A  L     +     D  ++ A
Sbjct: 472 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 531

Query: 579 LVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSAR 620
           L+  +   G+  + +QL + M++ G +P+ +T   +I+GL K +R
Sbjct: 532 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570

BLAST of CmoCh04G028180 vs. Swiss-Prot
Match: PPR27_ARATH (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-61
Identity = 143/505 (28.32%), Postives = 256/505 (50.69%), Query Frame = 1

Query: 113 LAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHN 172
           L +++W+  +  I++S +    ++H LA ++++S    FL   +    D+   S  +FH 
Sbjct: 85  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHS--IFHA 144

Query: 173 LVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKM 232
           + +C   C  N +I +ML+ AY      +  +E+FK+    G+  S ++C  ++  L K 
Sbjct: 145 ISMCDNVCV-NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKE 204

Query: 233 KCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTY 292
              A    +Y+EM R  +  N +TFN++   LC+ G +NK  + +E M+  G  P+VV+Y
Sbjct: 205 NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSY 264

Query: 293 NTLINSYCR---RGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHR 352
           NTLI+ YC+    G++  A  + + M    V P+L ++  L++G  K   +  + ++F  
Sbjct: 265 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 324

Query: 353 MIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGR 412
           M+D+++ P+V+ YN+LIN  C  G++ EA S+   M   G+ P+  T   ++ G+ +   
Sbjct: 325 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 384

Query: 413 LISALNLVVELRKLGTIVTYEIYDYLIVSLC---LEDRPFAAKSVLERIIKDGFQPNACI 472
           L  AL++   ++  G + T  +Y+ LI + C     D  FA K  +ER   +G  P+   
Sbjct: 385 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER---EGIVPDVGT 444

Query: 473 YNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMV 532
           YN LI   CR  N+  A  L  ++  +     + ++  L+   C    S     L+ EM 
Sbjct: 445 YNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMS 504

Query: 533 ESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEF-FDTESFNALVKFHRDFGNE 592
           + G+ P H    +++ GYCKEGN+  A ++     K+     +  S+N L++ +   G  
Sbjct: 505 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 564

Query: 593 TELMQLQDRMLKVGFVPNSLTCRYV 611
            +   L + ML+ G VPN +T   V
Sbjct: 565 EDANMLLNEMLEKGLVPNRITYEIV 582

BLAST of CmoCh04G028180 vs. Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.4e-60
Identity = 162/598 (27.09%), Postives = 277/598 (46.32%), Query Frame = 1

Query: 23  PKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSLL 82
           P  N +++SS  F PS   S +    +        + +   +VE +   LK  N N    
Sbjct: 20  PLKNLTTSSSPVFEPSSSSSSSSSSAS-------FSVSDSFLVEKICFSLKQGNNN---- 79

Query: 83  QSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDL-GITLSSQNYCLIIHILAW 142
              ++  L  L    V +++ RC+++      F + + F       +S +   +IHIL  
Sbjct: 80  ---VRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVR 139

Query: 143 SRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQ 202
           S + S A   L  +I  S        ++ ++L     +C  N  +F++LI+ YV+   ++
Sbjct: 140 SGRLSDAQSCLLRMIRRS---GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLR 199

Query: 203 ESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILT 262
           E++E+F  +   GF  S+ ACN ++  L ++      W +Y+E+ R GV  N YT NI+ 
Sbjct: 200 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 259

Query: 263 YVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVM 322
             LC+ G + KV  FL +++E+G  PD+VTYNTLI++Y  +G +++AF L   M  +G  
Sbjct: 260 NALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 319

Query: 323 PDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSL 382
           P + +Y +++NGLCK G+   A ++F  M+   L PD   Y +L+   CK G + E   +
Sbjct: 320 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 379

Query: 383 LHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCL 442
             DM    + PD      M+  + R G L  AL     +++ G I    IY  LI   C 
Sbjct: 380 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 439

Query: 443 EDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDS 502
           +     A ++   +++ G   +   YN ++   C+   + EA  L +EM +R   L  DS
Sbjct: 440 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER--ALFPDS 499

Query: 503 Y--KPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVS 562
           Y    LI   C +    +   L  +M E  +  D      L++G+ K G++  A+ +   
Sbjct: 500 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 559

Query: 563 FAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKS 618
                      S++ LV      G+  E  ++ D M+     P  + C  +I G  +S
Sbjct: 560 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598

BLAST of CmoCh04G028180 vs. TrEMBL
Match: A0A0A0KSF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523120 PE=4 SV=1)

HSP 1 Score: 1029.2 bits (2660), Expect = 2.1e-297
Identity = 507/633 (80.09%), Postives = 561/633 (88.63%), Query Frame = 1

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSS-------TFLPSIPRSETKLIVNPLYH 60
           M R  ASNL KL++ F F  S  KS  SS+SSS       TFL SIP SE KLIVNPLYH
Sbjct: 1   MLRTTASNLPKLAQSFFFHTSFSKSTLSSSSSSSSSSSSSTFLQSIPESEAKLIVNPLYH 60

Query: 61  FLPQNQNPFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVL 120
           FLPQNQNPFNIVELVSSHLKT+N  L+LLQS IKEL+PHLGHR++SKI+LRCQSNFVS L
Sbjct: 61  FLPQNQNPFNIVELVSSHLKTNNPRLALLQSHIKELIPHLGHRQISKILLRCQSNFVSAL 120

Query: 121 AFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNL 180
           AFFNWVK+DL I LSS NYCLIIHILAWSRQF +AMKFLSELIELSKD  S SEDVF NL
Sbjct: 121 AFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKD-VSSSEDVFQNL 180

Query: 181 VLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMK 240
           VLCTEHCNWNPVIFEMLIKAYVK+ +I ESY SFKKMVK+GFVP+VIACNCILNGLAKMK
Sbjct: 181 VLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMK 240

Query: 241 CDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYN 300
            DAQCWELYEEMGRIGVHSNAYTFNILTYVLCR GDVNK+N FLEKMEEEGFDPDVVTYN
Sbjct: 241 SDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYN 300

Query: 301 TLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDR 360
           TLI+SY RRGRL+DAFYLY+IM+RRGVMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR
Sbjct: 301 TLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDR 360

Query: 361 ELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISA 420
            +DPDVVLYNTLI AYCKDG LQEARSLLH+M  IGI PDSFTCRI+VEGYGR GRLISA
Sbjct: 361 GMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISA 420

Query: 421 LNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIES 480
           LNLVVE++KLG  V ++IY YLI+SLC EDRPFAAKS+LERI++D FQP++ IYNKLIES
Sbjct: 421 LNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIES 480

Query: 481 FCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPD 540
           FCR +NVSEALLLK EM+ RN+K + D+YK LI C+C INRSVDGEGLMVEMVES V+PD
Sbjct: 481 FCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPD 540

Query: 541 HQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQD 600
           H+ICR L+NGYCKEGN  KAESLLVSFAKDF+FFD+ESFN+LVK +RD GNET+LM+LQD
Sbjct: 541 HEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQD 600

Query: 601 RMLKVGFVPNSLTCRYVIHGLWKSARLDKRRVQ 627
           RMLK GF+PNSLTCRY+IHG+WKS RL+K+RVQ
Sbjct: 601 RMLKAGFLPNSLTCRYIIHGIWKSMRLNKQRVQ 632

BLAST of CmoCh04G028180 vs. TrEMBL
Match: M5WUJ9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017372mg PE=4 SV=1)

HSP 1 Score: 804.7 bits (2077), Expect = 8.3e-230
Identity = 382/599 (63.77%), Postives = 485/599 (80.97%), Query Frame = 1

Query: 28  SSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSLLQSDIK 87
           SS+SSS+ L +IP S +  + NPLYHFLPQ QNP NIV L+ S LK  N +LSLLQ+DIK
Sbjct: 2   SSSSSSSALQTIPDSHSISVSNPLYHFLPQTQNPNNIVNLICSSLKQGNAHLSLLQNDIK 61

Query: 88  ELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSM 147
           EL PHLG +E+S+++LR  S++ S L FFNWVK  LG+  ++QNYC++IHILA S++F  
Sbjct: 62  ELFPHLGAQEISRVLLRFHSDYSSALVFFNWVKNGLGLRPTTQNYCIVIHILACSKKFPQ 121

Query: 148 AMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESF 207
           AMK L ELIEL +D  S  +D+F NLV+CTE CNW+PVIF+MLIKAYVK  MI + + + 
Sbjct: 122 AMKLLWELIELVRD-VSPKDDIFQNLVVCTEDCNWDPVIFDMLIKAYVKAGMIGDGFSTM 181

Query: 208 KKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRV 267
           KK +++GF+PSVIACNC+LNGL K+ C  QCWE+YEEMGRIG+H N YTFNIL  VLC+ 
Sbjct: 182 KKAIRVGFIPSVIACNCLLNGLVKLNCIDQCWEVYEEMGRIGIHPNVYTFNILINVLCKD 241

Query: 268 GDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSY 327
           GDV+KVN FLEKMEEEGFDPD+VTYNTLI+SYCR+GRL+DAFYLY+IM+RRGVMPD+VSY
Sbjct: 242 GDVDKVNAFLEKMEEEGFDPDIVTYNTLISSYCRKGRLEDAFYLYKIMYRRGVMPDMVSY 301

Query: 328 TSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTR 387
           T+LMNGLCK G+VREAHQ+FHRMIDR LDPD V YNTLI+ YC +G++QE+RSLLH+M R
Sbjct: 302 TALMNGLCKQGKVREAHQIFHRMIDRGLDPDTVSYNTLISGYCHEGKMQESRSLLHEMIR 361

Query: 388 IGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFA 447
            GICPD FTCRI++EGYG+ G+L+SALNLVVEL++    ++ ++YDYL+V+LC E RPFA
Sbjct: 362 NGICPDDFTCRIVIEGYGKEGKLLSALNLVVELQRFQVSISRDVYDYLVVALCQELRPFA 421

Query: 448 AKSVLERIIKDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLIS 507
           AKS+LER  KDG  P   IYNKLIES C    V+EALLLK+EM+++N K  + +Y+ LI 
Sbjct: 422 AKSLLERSSKDGHLPGLDIYNKLIESLCENLYVAEALLLKAEMIRKNIKPDLFTYRTLIC 481

Query: 508 CLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFF 567
           CLC INR+V+GE LM EM ESG+ P+ +ICR LI GYCKE +V KAE+LL  FAK+F+ F
Sbjct: 482 CLCHINRTVEGESLMKEMAESGLAPNLEICRSLIKGYCKERDVDKAETLLGLFAKEFQVF 541

Query: 568 DTESFNALVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSARLDKRRVQ 627
           D+ES+N LV+   + G+  +L++LQDRM+KVGF PNSLT +YVIHGLW++AR DK +++
Sbjct: 542 DSESYNTLVEVFCEDGDMAKLLELQDRMMKVGFAPNSLTFKYVIHGLWRTARPDKNKLR 599

BLAST of CmoCh04G028180 vs. TrEMBL
Match: W9SPY3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020550 PE=4 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 3.3e-218
Identity = 368/621 (59.26%), Postives = 482/621 (77.62%), Query Frame = 1

Query: 7   SNLTKLSKP-FVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIV 66
           SN+  L K  F   +S   S+ SS+SSS+ L +IP S  K  +NPLY+ LP  QNP NIV
Sbjct: 47  SNVNSLRKSNFSSSSSSSSSSSSSSSSSSSLITIPDSNPKPALNPLYNLLPPTQNPHNIV 106

Query: 67  ELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGI 126
            L+ S L+   T+LSLLQ+DIK LLP+LG  E+S+++LRCQSN  S L FFNWVK DLG+
Sbjct: 107 NLICSSLRHETTHLSLLQNDIKTLLPYLGPNEISRVLLRCQSNHSSALTFFNWVKNDLGL 166

Query: 127 TLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPV 186
             ++QNYC+++HILAWSR+FS AMK L+ELIE+S       +D+F  L+   E CNW+PV
Sbjct: 167 RPTTQNYCIVVHILAWSRKFSPAMKLLTELIEVSP-----KDDIFQILISSAEDCNWDPV 226

Query: 187 IFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEM 246
           +F+MLIKAYVK  MI+E + +F+K++++GF PSVI+CNC+L+GLA +     CW +YEEM
Sbjct: 227 VFDMLIKAYVKSGMIREGFSTFRKIIEVGFFPSVISCNCLLHGLANLNYIENCWRVYEEM 286

Query: 247 GRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRL 306
           GRIGVH N YTFNILT VLC+ GDV+KVN F+EKMEEEGFDPDVVTYNTLIN+YC+RG+L
Sbjct: 287 GRIGVHPNGYTFNILTRVLCKDGDVDKVNVFIEKMEEEGFDPDVVTYNTLINTYCKRGKL 346

Query: 307 DDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTL 366
           +DAFYLY+IM+RR VMPDLV+YT+LMNGLC+ GRV+EAHQLF+ M+ R L+PDV+ YNT+
Sbjct: 347 EDAFYLYKIMYRRNVMPDLVTYTALMNGLCRQGRVKEAHQLFNGMVHRGLNPDVLSYNTI 406

Query: 367 INAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGT 426
           I+ Y  +G+++E RSLL++M   GICPDSFTCRI+VEGY + G+LISA+NLVVEL++ G 
Sbjct: 407 ISGYSNEGKMRECRSLLYEMIGSGICPDSFTCRILVEGYQKEGKLISAVNLVVELKRFGV 466

Query: 427 IVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNVSEALL 486
            V+ +IY YL+V+LC  + PFAAKS+LER+ +DG+ P+  IYN+LIES C+ +   EAL+
Sbjct: 467 SVSSDIYGYLMVALCRANHPFAAKSLLERVSRDGYVPDIVIYNELIESLCKCNYAEEALV 526

Query: 487 LKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYC 546
           LK +M++  FK ++ +Y+ L+ CLC  NRS +GE LM EMVESG+ PD  +CR L+NGYC
Sbjct: 527 LKVDMLRMGFKPNLVTYRALVDCLCRANRSEEGESLMKEMVESGLSPDLAMCRALVNGYC 586

Query: 547 KEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGFVPNSL 606
           KE  V KAESLL  FA +F+ FDTES+NALVK   + G+  +L+ LQDRM KVGF PNSL
Sbjct: 587 KEREVAKAESLLTFFATEFQVFDTESYNALVKVFSEHGDTGKLLDLQDRMQKVGFAPNSL 646

Query: 607 TCRYVIHGLWKSARLDKRRVQ 627
           TC+YVIH LW S R++K ++Q
Sbjct: 647 TCKYVIHVLWNSTRIEKGKLQ 662

BLAST of CmoCh04G028180 vs. TrEMBL
Match: A5B987_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038361 PE=4 SV=1)

HSP 1 Score: 761.5 bits (1965), Expect = 8.0e-217
Identity = 362/610 (59.34%), Postives = 478/610 (78.36%), Query Frame = 1

Query: 12  LSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIVELVSSH 71
           LS P +    IPK  +SS+SSS  L ++ +S+T  I N LYH LPQ QNP NIV L+ S+
Sbjct: 64  LSLPVLRFIFIPKFPYSSSSSS--LQTLNQSQTNSISNSLYHLLPQTQNPNNIVNLICSN 123

Query: 72  LKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGITLSSQN 131
           LK  N+NL+LL +++  LLPHLG +E+S+++LRCQS+  + L+FFNWVK DLG+  S+QN
Sbjct: 124 LKQHNSNLALLHTEVNALLPHLGAQEISRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQN 183

Query: 132 YCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLI 191
           YC+I+H LAWSR FS A+KFL EL+EL KD+  G EDVF NL+LCTE CNW+PV+F+ML+
Sbjct: 184 YCIIVHTLAWSRNFSQAIKFLCELVELVKDDLPG-EDVFKNLILCTEDCNWDPVVFDMLV 243

Query: 192 KAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVH 251
           KAY+++  ++E   SF++M+++GFVP+VI  N +LNGL K+    +CWE+YEEM R G+ 
Sbjct: 244 KAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIA 303

Query: 252 SNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYL 311
            N YTFNILT+VLC+ GD  KVN+FLEKMEEEGFDPD+VTYNTLINSYCR+GRLDDAFYL
Sbjct: 304 PNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYL 363

Query: 312 YRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCK 371
           Y+IM+RRGV+PDLVSYT+LMNGLCK GRVREAHQLFHRM+ R L PD+V YNTLI+ YCK
Sbjct: 364 YKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCK 423

Query: 372 DGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEI 431
           +G++QE+RSLLHDM   GI PDSFTC ++VEGYG+ G+ +SALNLVVEL++ G  ++ +I
Sbjct: 424 EGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDI 483

Query: 432 YDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMV 491
           Y YLIV+LC E+RPFAAK++LER+ +DG +    IYN+LI+SFC+   ++EALLLK EMV
Sbjct: 484 YSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMV 543

Query: 492 KRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVY 551
            +  K ++ +Y+ +  CL  ++RS++GE L+ EMV SG LPD +ICR L  GYC+E ++ 
Sbjct: 544 DKEIKPNLATYRAVXGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDID 603

Query: 552 KAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVI 611
           KAESLL   AK+F+  DTESFNAL++     G+    +++QD MLK+G +PN LTC+YVI
Sbjct: 604 KAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVI 663

Query: 612 HGLWKSARLD 622
            GLWK+ R+D
Sbjct: 664 DGLWKARRVD 670

BLAST of CmoCh04G028180 vs. TrEMBL
Match: A0A067LPH7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10269 PE=4 SV=1)

HSP 1 Score: 756.5 bits (1952), Expect = 2.6e-215
Identity = 370/613 (60.36%), Postives = 482/613 (78.63%), Query Frame = 1

Query: 13  SKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIVELVSSHL 72
           SKPF++   IP+S +S +SS   + S P S  K + NPLYH LP+ QNP NIV ++ S L
Sbjct: 23  SKPFLY-HFIPQSPYSFSSSDLDIISNPSS--KSLSNPLYHLLPRTQNPNNIVNIIYSFL 82

Query: 73  KTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNY 132
           K  NT L++LQ+DIK LL HLG  E+S+++LRCQS+ +S LAFFNWVK DL I  S+ NY
Sbjct: 83  KQDNTQLAILQNDIKGLLAHLGTNEISRVLLRCQSDSISALAFFNWVKNDLDIKPSTHNY 142

Query: 133 CLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIK 192
           CL++HILA SR+F  AMKFL+ELI L KD AS SEDVF +LVLC E CNW+PVIF+MLIK
Sbjct: 143 CLLVHILACSREFKQAMKFLTELIRLVKDCAS-SEDVFQSLVLCCEDCNWDPVIFDMLIK 202

Query: 193 AYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHS 252
           AYVK  +I+E + +F K+V++G+VPSV+ACN +LNGL K+ C   CW++Y EMG++G+H 
Sbjct: 203 AYVKEGLIKEGFSTFMKIVEVGYVPSVVACNSVLNGLLKLNCIDLCWQVYIEMGKVGIHP 262

Query: 253 NAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLY 312
           N+YTFNILT+V CR GDV KVN+FLEKMEEEGF+PD+VTYNTLI+ YCR+GRL+DAFYLY
Sbjct: 263 NSYTFNILTHVFCRDGDVTKVNDFLEKMEEEGFEPDIVTYNTLISCYCRKGRLNDAFYLY 322

Query: 313 RIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKD 372
           RIM+RR V+PDLVSYT+LM+GLCK GR+R+AHQLFHRM+ R L+PD+V +NTLI  YCK+
Sbjct: 323 RIMYRRRVLPDLVSYTALMSGLCKEGRLRDAHQLFHRMVHRGLNPDIVSFNTLICGYCKE 382

Query: 373 GRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIY 432
           G+++E R LLH+M   GI PD+ TCR++VEGY + GR++SALNLVVEL + G  ++++IY
Sbjct: 383 GKIRELRLLLHEMIGSGIRPDNVTCRVLVEGYAKQGRIVSALNLVVELERFGVPISWDIY 442

Query: 433 DYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVK 492
           DYLIVSLC ED+PFAAK++LERI + G+ P A I N+LI+SFC+   V++ALLLK+EMV 
Sbjct: 443 DYLIVSLCKEDKPFAAKNLLERICQQGYVPGAEICNELIQSFCKSDCVADALLLKAEMVH 502

Query: 493 RNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYK 552
           RN K ++  YK L+ CLC ++R  + E LM EM++S +LPD +ICR L + YCKE +  K
Sbjct: 503 RNLKPNVTGYKALLCCLCRMSRRREVESLMEEMLQSDMLPDPEICRALTHMYCKERDFGK 562

Query: 553 AESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIH 612
           AESLL  FAK+F+ FDTES+N LVK   + G+ T+L+ LQDRMLKVG  PN LT +++IH
Sbjct: 563 AESLLEFFAKEFQIFDTESYNTLVKISCEDGDFTKLLYLQDRMLKVGVTPNGLTFKHMIH 622

Query: 613 GLWKSARLDKRRV 626
           GL KS  LDK ++
Sbjct: 623 GLSKSMSLDKDKL 631

BLAST of CmoCh04G028180 vs. TAIR10
Match: AT5G40400.1 (AT5G40400.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 609.0 bits (1569), Expect = 3.4e-174
Identity = 304/594 (51.18%), Postives = 420/594 (70.71%), Query Frame = 1

Query: 27  FSSASSSTFLPSIPRSET--KLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSL--L 86
           FSS SSS     +PR     K I+NPLY+ LPQ+QNP  IV+++ S L  S+ ++ L  L
Sbjct: 11  FSSYSSSI----VPRCSNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNL 70

Query: 87  QSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWS 146
           + ++K L+PHLG+ E+S+++LR QS+    + FF WVKFDLG   +  NYCL++HIL  S
Sbjct: 71  RDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSS 130

Query: 147 RQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQE 206
           ++F +AM+FL ELIEL+        DVF  LV  T+ CNW+PV+F+ML+K Y+K+ +++E
Sbjct: 131 KKFPLAMQFLCELIELTSKKEE--VDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEE 190

Query: 207 SYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILTY 266
            +  F++++  GF  SV+ CN +LNGL K+     CW++Y  M R+G+H N YTFNILT 
Sbjct: 191 GFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTN 250

Query: 267 VLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMP 326
           V C   +  +V++FLEKMEEEGF+PD+VTYNTL++SYCRRGRL +AFYLY+IM+RR V+P
Sbjct: 251 VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVP 310

Query: 327 DLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLL 386
           DLV+YTSL+ GLCK GRVREAHQ FHRM+DR + PD + YNTLI AYCK+G +Q+++ LL
Sbjct: 311 DLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLL 370

Query: 387 HDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLE 446
           H+M    + PD FTC+++VEG+ R GRL+SA+N VVELR+L   + +E+ D+LIVSLC E
Sbjct: 371 HEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQE 430

Query: 447 DRPFAAKSVLERII-KDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDS 506
            +PFAAK +L+RII ++G +     YN LIES  R   + EAL+LK ++  +N  L   +
Sbjct: 431 GKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKT 490

Query: 507 YKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFA 566
           Y+ LI CLC I R+ + E LM EM +S V PD  IC  L+ GYCKE +  KAE LL  FA
Sbjct: 491 YRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFA 550

Query: 567 KDFEFFDTESFNALVKFHRDFG-NETELMQLQDRMLKVGFVPNSLTCRYVIHGL 615
            +F  FD ES+N+LVK   + G    + ++LQ+RM ++GFVPN LTC+Y+I  L
Sbjct: 551 MEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598

BLAST of CmoCh04G028180 vs. TAIR10
Match: AT5G55840.1 (AT5G55840.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 241.1 bits (614), Expect = 1.8e-63
Identity = 151/507 (29.78%), Postives = 243/507 (47.93%), Query Frame = 1

Query: 113 LAFFNWVKFDLGITLSS--QNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVF 172
           L F  WV    G+      Q  C+  HIL  +R +  A   L EL  +S      S  VF
Sbjct: 94  LKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS----GKSSFVF 153

Query: 173 HNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLA 232
             L+     CN NP ++++LI+ Y++  MIQ+S E F+ M   GF PSV  CN IL  + 
Sbjct: 154 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 213

Query: 233 KMKCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVV 292
           K   D   W   +EM +  +  +  TFNIL  VLC  G   K +  ++KME+ G+ P +V
Sbjct: 214 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 273

Query: 293 TYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRM 352
           TYNT+++ YC++GR   A  L   M  +GV  D+ +Y  L++ LC+  R+ + + L   M
Sbjct: 274 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 333

Query: 353 IDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRL 412
             R + P+ V YNTLIN +  +G++  A  LL++M   G+ P+  T   +++G+   G  
Sbjct: 334 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 393

Query: 413 ISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKL 472
             AL +   +   G   +   Y  L+  LC       A+    R+ ++G       Y  +
Sbjct: 394 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 453

Query: 473 IESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGV 532
           I+  C+   + EA++L +EM K      I +Y  LI+  C + R    + ++  +   G+
Sbjct: 454 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 513

Query: 533 LPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQ 592
            P+  I   LI   C+ G + +A  +  +   +    D  +FN LV      G   E  +
Sbjct: 514 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 573

Query: 593 LQDRMLKVGFVPNSLTCRYVIHGLWKS 618
               M   G +PN+++   +I+G   S
Sbjct: 574 FMRCMTSDGILPNTVSFDCLINGYGNS 596

BLAST of CmoCh04G028180 vs. TAIR10
Match: AT1G09820.1 (AT1G09820.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 239.2 bits (609), Expect = 7.0e-63
Identity = 143/505 (28.32%), Postives = 256/505 (50.69%), Query Frame = 1

Query: 113 LAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHN 172
           L +++W+  +  I++S +    ++H LA ++++S    FL   +    D+   S  +FH 
Sbjct: 85  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHS--IFHA 144

Query: 173 LVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKM 232
           + +C   C  N +I +ML+ AY      +  +E+FK+    G+  S ++C  ++  L K 
Sbjct: 145 ISMCDNVCV-NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKE 204

Query: 233 KCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTY 292
              A    +Y+EM R  +  N +TFN++   LC+ G +NK  + +E M+  G  P+VV+Y
Sbjct: 205 NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSY 264

Query: 293 NTLINSYCR---RGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHR 352
           NTLI+ YC+    G++  A  + + M    V P+L ++  L++G  K   +  + ++F  
Sbjct: 265 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 324

Query: 353 MIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGR 412
           M+D+++ P+V+ YN+LIN  C  G++ EA S+   M   G+ P+  T   ++ G+ +   
Sbjct: 325 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 384

Query: 413 LISALNLVVELRKLGTIVTYEIYDYLIVSLC---LEDRPFAAKSVLERIIKDGFQPNACI 472
           L  AL++   ++  G + T  +Y+ LI + C     D  FA K  +ER   +G  P+   
Sbjct: 385 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER---EGIVPDVGT 444

Query: 473 YNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMV 532
           YN LI   CR  N+  A  L  ++  +     + ++  L+   C    S     L+ EM 
Sbjct: 445 YNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMS 504

Query: 533 ESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEF-FDTESFNALVKFHRDFGNE 592
           + G+ P H    +++ GYCKEGN+  A ++     K+     +  S+N L++ +   G  
Sbjct: 505 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 564

Query: 593 TELMQLQDRMLKVGFVPNSLTCRYV 611
            +   L + ML+ G VPN +T   V
Sbjct: 565 EDANMLLNEMLEKGLVPNRITYEIV 582

BLAST of CmoCh04G028180 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 239.2 bits (609), Expect = 7.0e-63
Identity = 151/525 (28.76%), Postives = 261/525 (49.71%), Query Frame = 1

Query: 99  SKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIEL 158
           S ++L+ Q++   +L F NW       TL  +  C+ +HIL   + +  A     ++   
Sbjct: 52  SNLLLKSQNDQALILKFLNWANPHQFFTLRCK--CITLHILTKFKLYKTAQILAEDVAAK 111

Query: 159 SKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPS 218
           + D+   S  VF +L    + C     +F++++K+Y ++ +I ++          GF+P 
Sbjct: 112 TLDDEYASL-VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPG 171

Query: 219 VIACNCILNGLAKMKCDAQCWE-LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFL 278
           V++ N +L+   + K +    E +++EM    V  N +T+NIL    C  G+++      
Sbjct: 172 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 231

Query: 279 EKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKL 338
           +KME +G  P+VVTYNTLI+ YC+  ++DD F L R M  +G+ P+L+SY  ++NGLC+ 
Sbjct: 232 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 291

Query: 339 GRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTC 398
           GR++E   +   M  R    D V YNTLI  YCK+G   +A  +  +M R G+ P   T 
Sbjct: 292 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 351

Query: 399 RIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIK 458
             ++    + G +  A+  + ++R  G       Y  L+     +     A  VL  +  
Sbjct: 352 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 411

Query: 459 DGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVD 518
           +GF P+   YN LI   C    + +A+ +  +M ++     + SY  ++S  C   RS D
Sbjct: 412 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC---RSYD 471

Query: 519 -GEGLMV--EMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNA 578
             E L V  EMVE G+ PD      LI G+C++    +A  L     +     D  ++ A
Sbjct: 472 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 531

Query: 579 LVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSAR 620
           L+  +   G+  + +QL + M++ G +P+ +T   +I+GL K +R
Sbjct: 532 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570

BLAST of CmoCh04G028180 vs. TAIR10
Match: AT5G01110.1 (AT5G01110.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 235.7 bits (600), Expect = 7.7e-62
Identity = 162/598 (27.09%), Postives = 277/598 (46.32%), Query Frame = 1

Query: 23  PKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSLL 82
           P  N +++SS  F PS   S +    +        + +   +VE +   LK  N N    
Sbjct: 20  PLKNLTTSSSPVFEPSSSSSSSSSSAS-------FSVSDSFLVEKICFSLKQGNNN---- 79

Query: 83  QSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDL-GITLSSQNYCLIIHILAW 142
              ++  L  L    V +++ RC+++      F + + F       +S +   +IHIL  
Sbjct: 80  ---VRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVR 139

Query: 143 SRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQ 202
           S + S A   L  +I  S        ++ ++L     +C  N  +F++LI+ YV+   ++
Sbjct: 140 SGRLSDAQSCLLRMIRRS---GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLR 199

Query: 203 ESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILT 262
           E++E+F  +   GF  S+ ACN ++  L ++      W +Y+E+ R GV  N YT NI+ 
Sbjct: 200 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 259

Query: 263 YVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVM 322
             LC+ G + KV  FL +++E+G  PD+VTYNTLI++Y  +G +++AF L   M  +G  
Sbjct: 260 NALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 319

Query: 323 PDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSL 382
           P + +Y +++NGLCK G+   A ++F  M+   L PD   Y +L+   CK G + E   +
Sbjct: 320 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 379

Query: 383 LHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCL 442
             DM    + PD      M+  + R G L  AL     +++ G I    IY  LI   C 
Sbjct: 380 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 439

Query: 443 EDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDS 502
           +     A ++   +++ G   +   YN ++   C+   + EA  L +EM +R   L  DS
Sbjct: 440 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER--ALFPDS 499

Query: 503 Y--KPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVS 562
           Y    LI   C +    +   L  +M E  +  D      L++G+ K G++  A+ +   
Sbjct: 500 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 559

Query: 563 FAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKS 618
                      S++ LV      G+  E  ++ D M+     P  + C  +I G  +S
Sbjct: 560 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598

BLAST of CmoCh04G028180 vs. NCBI nr
Match: gi|778703656|ref|XP_004142850.2| (PREDICTED: pentatricopeptide repeat-containing protein At5g40400 [Cucumis sativus])

HSP 1 Score: 1029.2 bits (2660), Expect = 3.0e-297
Identity = 507/633 (80.09%), Postives = 561/633 (88.63%), Query Frame = 1

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSS-------TFLPSIPRSETKLIVNPLYH 60
           M R  ASNL KL++ F F  S  KS  SS+SSS       TFL SIP SE KLIVNPLYH
Sbjct: 1   MLRTTASNLPKLAQSFFFHTSFSKSTLSSSSSSSSSSSSSTFLQSIPESEAKLIVNPLYH 60

Query: 61  FLPQNQNPFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVL 120
           FLPQNQNPFNIVELVSSHLKT+N  L+LLQS IKEL+PHLGHR++SKI+LRCQSNFVS L
Sbjct: 61  FLPQNQNPFNIVELVSSHLKTNNPRLALLQSHIKELIPHLGHRQISKILLRCQSNFVSAL 120

Query: 121 AFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNL 180
           AFFNWVK+DL I LSS NYCLIIHILAWSRQF +AMKFLSELIELSKD  S SEDVF NL
Sbjct: 121 AFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKD-VSSSEDVFQNL 180

Query: 181 VLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMK 240
           VLCTEHCNWNPVIFEMLIKAYVK+ +I ESY SFKKMVK+GFVP+VIACNCILNGLAKMK
Sbjct: 181 VLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMK 240

Query: 241 CDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYN 300
            DAQCWELYEEMGRIGVHSNAYTFNILTYVLCR GDVNK+N FLEKMEEEGFDPDVVTYN
Sbjct: 241 SDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYN 300

Query: 301 TLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDR 360
           TLI+SY RRGRL+DAFYLY+IM+RRGVMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR
Sbjct: 301 TLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDR 360

Query: 361 ELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISA 420
            +DPDVVLYNTLI AYCKDG LQEARSLLH+M  IGI PDSFTCRI+VEGYGR GRLISA
Sbjct: 361 GMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISA 420

Query: 421 LNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIES 480
           LNLVVE++KLG  V ++IY YLI+SLC EDRPFAAKS+LERI++D FQP++ IYNKLIES
Sbjct: 421 LNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIES 480

Query: 481 FCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPD 540
           FCR +NVSEALLLK EM+ RN+K + D+YK LI C+C INRSVDGEGLMVEMVES V+PD
Sbjct: 481 FCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPD 540

Query: 541 HQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQD 600
           H+ICR L+NGYCKEGN  KAESLLVSFAKDF+FFD+ESFN+LVK +RD GNET+LM+LQD
Sbjct: 541 HEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQD 600

Query: 601 RMLKVGFVPNSLTCRYVIHGLWKSARLDKRRVQ 627
           RMLK GF+PNSLTCRY+IHG+WKS RL+K+RVQ
Sbjct: 601 RMLKAGFLPNSLTCRYIIHGIWKSMRLNKQRVQ 632

BLAST of CmoCh04G028180 vs. NCBI nr
Match: gi|659117805|ref|XP_008458797.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g40400 [Cucumis melo])

HSP 1 Score: 1016.9 bits (2628), Expect = 1.5e-293
Identity = 499/627 (79.59%), Postives = 556/627 (88.68%), Query Frame = 1

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
           M R  ASNL KLS+ F FL+S  KS  SS+SSSTFL SIP SE K IVNPLYHFLPQNQN
Sbjct: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
           PFNIVELVS HLKT+N  L+LLQ++IK L+P+LGH ++SKI+LRCQSNFVS LAFFNWVK
Sbjct: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120

Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
           +DL I L+S NYCLIIHILAWSRQF +AMK LSELIELSKD  S SEDVF NLVLCTEHC
Sbjct: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKD-VSSSEDVFQNLVLCTEHC 180

Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
           NWNPVIFEMLIKAYVK+ +I ESY SFKKMVK+GFVPSVIACNCIL+GLAKMK D QCWE
Sbjct: 181 NWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPSVIACNCILHGLAKMKSDGQCWE 240

Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
           LYEEMGRIGVHSNAYTFNILTYVLCR GDVNK+NEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYC 300

Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
           RRGRLDDAFYLYRIM+RR VMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR +DPDVV
Sbjct: 301 RRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVV 360

Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
            YNTLI AYCKDG LQEARSLLHDM  IGI PD+FTCRI+VEGYGR GRLISALNLVVE+
Sbjct: 361 SYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEI 420

Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
           +KLG  + ++IY YLI+SLC EDRPFAAKS+LERI++D FQP++ IYNKLIESFCR +NV
Sbjct: 421 QKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 480

Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
           SEALLLKSEM+ RNFK +I +YK LI C+C INRSVDGEGLM EMVES VLPDH+ICR L
Sbjct: 481 SEALLLKSEMINRNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRAL 540

Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
           +NGYCKEGN  KAESLLVSFAKDF+FFD+ESFN+LVK + D GNET+LM+LQ RMLK GF
Sbjct: 541 VNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGF 600

Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQA 628
           +PN+LTC+Y+IHGLWK  RL+++RVQA
Sbjct: 601 LPNNLTCQYIIHGLWKFTRLNEQRVQA 626

BLAST of CmoCh04G028180 vs. NCBI nr
Match: gi|645249013|ref|XP_008230554.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g40400 [Prunus mume])

HSP 1 Score: 805.8 bits (2080), Expect = 5.3e-230
Identity = 386/620 (62.26%), Postives = 496/620 (80.00%), Query Frame = 1

Query: 6   ASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIV 65
           ++N    +KP + +  I K +  S+SSS+ L +IP S +  + NPLYHFLPQ QNP NIV
Sbjct: 15  SANSPYYTKPLLNINFILKISALSSSSSSALQTIPDSHSISVSNPLYHFLPQTQNPNNIV 74

Query: 66  ELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGI 125
            L+ S LK  N +L+LLQ+DIKELLPHLG +E+S+++LR QS++ S L FFNWVK  LG+
Sbjct: 75  NLICSSLKQGNAHLALLQNDIKELLPHLGAQEISRVLLRFQSDYSSALVFFNWVKNGLGL 134

Query: 126 TLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPV 185
             ++QNYC++IHILA S++F  AMK L ELIEL +D  S  +D+F NLV+CTE CNW+PV
Sbjct: 135 RPTTQNYCIVIHILACSKKFPQAMKLLWELIELVRD-VSPKDDIFQNLVVCTEDCNWDPV 194

Query: 186 IFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEM 245
           IF+MLIKAYVK  MI + + + KK +++GF+PSVIACNC+LNGL K+ C  QCWE++EEM
Sbjct: 195 IFDMLIKAYVKAGMIGDGFSTLKKTIRVGFIPSVIACNCLLNGLVKLNCIDQCWEVHEEM 254

Query: 246 GRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRL 305
           GRIG+H N YTFNIL  VLC+ GDV+KVN FLEKMEEEGFDPD+VTYNTLI+SYCR+GRL
Sbjct: 255 GRIGIHPNVYTFNILINVLCKDGDVDKVNAFLEKMEEEGFDPDIVTYNTLISSYCRKGRL 314

Query: 306 DDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTL 365
           +DAFYLY+IM+RRGVMPD+VSYT+LMNGLCK G+VREAHQ+FHRMIDR LDPD V YNTL
Sbjct: 315 EDAFYLYKIMYRRGVMPDMVSYTALMNGLCKQGKVREAHQIFHRMIDRGLDPDTVSYNTL 374

Query: 366 INAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGT 425
           I+ YC +G++QE+RSLLH+M R GICPD FTCRI++EGYG+ G+L+SALNLVVEL++   
Sbjct: 375 ISGYCHEGKMQESRSLLHEMIRNGICPDDFTCRIVIEGYGKEGKLLSALNLVVELQRFQV 434

Query: 426 IVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNVSEALL 485
            +++++YDYLIV+LC E RPFAAKS+LER  KDG  P   IYNKLIES C    V+EALL
Sbjct: 435 SISHDVYDYLIVALCQELRPFAAKSLLERSSKDGHLPGLDIYNKLIESLCENLYVAEALL 494

Query: 486 LKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYC 545
           LK+EMV++N K  + +Y+ LI CLC I+R+ +GE LM EM ESG+ P+ +ICR LI GYC
Sbjct: 495 LKAEMVRKNIKPDLITYRTLICCLCHISRTAEGESLMEEMAESGLAPNLEICRSLIKGYC 554

Query: 546 KEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGFVPNSL 605
           KE ++ KAE+LL  FAK+F+ FD+ES+N LVK   + G+  +L++LQDRM+KVGF PNSL
Sbjct: 555 KERDIDKAETLLGLFAKEFQVFDSESYNTLVKVFCEDGDMAKLLELQDRMMKVGFAPNSL 614

Query: 606 TCRYVIHGLWKSARLDKRRV 626
           T +YVIHGLW++AR DK ++
Sbjct: 615 TFKYVIHGLWRTARPDKDKL 633

BLAST of CmoCh04G028180 vs. NCBI nr
Match: gi|595948704|ref|XP_007216273.1| (hypothetical protein PRUPE_ppa017372mg, partial [Prunus persica])

HSP 1 Score: 804.7 bits (2077), Expect = 1.2e-229
Identity = 382/599 (63.77%), Postives = 485/599 (80.97%), Query Frame = 1

Query: 28  SSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSLLQSDIK 87
           SS+SSS+ L +IP S +  + NPLYHFLPQ QNP NIV L+ S LK  N +LSLLQ+DIK
Sbjct: 2   SSSSSSSALQTIPDSHSISVSNPLYHFLPQTQNPNNIVNLICSSLKQGNAHLSLLQNDIK 61

Query: 88  ELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSM 147
           EL PHLG +E+S+++LR  S++ S L FFNWVK  LG+  ++QNYC++IHILA S++F  
Sbjct: 62  ELFPHLGAQEISRVLLRFHSDYSSALVFFNWVKNGLGLRPTTQNYCIVIHILACSKKFPQ 121

Query: 148 AMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESF 207
           AMK L ELIEL +D  S  +D+F NLV+CTE CNW+PVIF+MLIKAYVK  MI + + + 
Sbjct: 122 AMKLLWELIELVRD-VSPKDDIFQNLVVCTEDCNWDPVIFDMLIKAYVKAGMIGDGFSTM 181

Query: 208 KKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRV 267
           KK +++GF+PSVIACNC+LNGL K+ C  QCWE+YEEMGRIG+H N YTFNIL  VLC+ 
Sbjct: 182 KKAIRVGFIPSVIACNCLLNGLVKLNCIDQCWEVYEEMGRIGIHPNVYTFNILINVLCKD 241

Query: 268 GDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSY 327
           GDV+KVN FLEKMEEEGFDPD+VTYNTLI+SYCR+GRL+DAFYLY+IM+RRGVMPD+VSY
Sbjct: 242 GDVDKVNAFLEKMEEEGFDPDIVTYNTLISSYCRKGRLEDAFYLYKIMYRRGVMPDMVSY 301

Query: 328 TSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTR 387
           T+LMNGLCK G+VREAHQ+FHRMIDR LDPD V YNTLI+ YC +G++QE+RSLLH+M R
Sbjct: 302 TALMNGLCKQGKVREAHQIFHRMIDRGLDPDTVSYNTLISGYCHEGKMQESRSLLHEMIR 361

Query: 388 IGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFA 447
            GICPD FTCRI++EGYG+ G+L+SALNLVVEL++    ++ ++YDYL+V+LC E RPFA
Sbjct: 362 NGICPDDFTCRIVIEGYGKEGKLLSALNLVVELQRFQVSISRDVYDYLVVALCQELRPFA 421

Query: 448 AKSVLERIIKDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLIS 507
           AKS+LER  KDG  P   IYNKLIES C    V+EALLLK+EM+++N K  + +Y+ LI 
Sbjct: 422 AKSLLERSSKDGHLPGLDIYNKLIESLCENLYVAEALLLKAEMIRKNIKPDLFTYRTLIC 481

Query: 508 CLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFF 567
           CLC INR+V+GE LM EM ESG+ P+ +ICR LI GYCKE +V KAE+LL  FAK+F+ F
Sbjct: 482 CLCHINRTVEGESLMKEMAESGLAPNLEICRSLIKGYCKERDVDKAETLLGLFAKEFQVF 541

Query: 568 DTESFNALVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSARLDKRRVQ 627
           D+ES+N LV+   + G+  +L++LQDRM+KVGF PNSLT +YVIHGLW++AR DK +++
Sbjct: 542 DSESYNTLVEVFCEDGDMAKLLELQDRMMKVGFAPNSLTFKYVIHGLWRTARPDKNKLR 599

BLAST of CmoCh04G028180 vs. NCBI nr
Match: gi|694411514|ref|XP_009334116.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g40400 [Pyrus x bretschneideri])

HSP 1 Score: 777.7 bits (2007), Expect = 1.6e-221
Identity = 370/619 (59.77%), Postives = 480/619 (77.54%), Query Frame = 1

Query: 7   SNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIVE 66
           +N     KP   +   PK +  S+SSS+ L +IP S +K I NPLYHFLPQ QNP N V+
Sbjct: 17  TNSRSRRKPLSPINFSPKISAFSSSSSSALQTIPDSPSKPISNPLYHFLPQTQNPNNTVD 76

Query: 67  LVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGIT 126
           L+ S LK    +L+LLQ+DIK LLPHLG RE+S+++LR QS+  S +AFFNWVK DLG+ 
Sbjct: 77  LICSSLKQGKPHLALLQNDIKGLLPHLGAREISRVLLRFQSDHSSAIAFFNWVKNDLGLR 136

Query: 127 LSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVI 186
            S+QNYC+++HILA  ++F  AM  L ELI L   + S  +D+F +LV CTE CNW+PV+
Sbjct: 137 PSTQNYCIVVHILACCKKFPKAMNLLRELIVLLGRDVSPKDDIFQSLVSCTEDCNWDPVV 196

Query: 187 FEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMG 246
           F+MLIKAYVK  MI+    +F+K+V  GFVPSV++CNC+LNGL K+    QCW++YEEMG
Sbjct: 197 FDMLIKAYVKAGMIRGGLSTFRKIVNDGFVPSVVSCNCLLNGLVKLNRIDQCWDVYEEMG 256

Query: 247 RIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLD 306
           RIG+H N YTFNIL  VLC+ GDV KVN F+EKMEEEGFDPD+VTYNTLI+SYCR+GR++
Sbjct: 257 RIGIHPNVYTFNILINVLCKDGDVEKVNAFMEKMEEEGFDPDIVTYNTLISSYCRKGRME 316

Query: 307 DAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLI 366
           DAFYLY+IM+RRGV+PD+VSYT+LMNGLCK G+VREAHQ+FHRM+DR LD D V YNTLI
Sbjct: 317 DAFYLYKIMYRRGVVPDMVSYTALMNGLCKQGKVREAHQIFHRMVDRGLDQDAVTYNTLI 376

Query: 367 NAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTI 426
           + YC++G++QE R LLH+M R GICPD FTCR++VEGYG+ G+L+SALNLVVEL+K    
Sbjct: 377 SGYCREGKMQECRLLLHEMIRKGICPDDFTCRVVVEGYGKEGKLLSALNLVVELQKFQIS 436

Query: 427 VTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNVSEALLL 486
           +++ IYDYLIV+LC E+ PFAAKS+LER  +DG+ P    YN LIES C  H+ +EALLL
Sbjct: 437 ISHGIYDYLIVALCRENHPFAAKSLLERSSQDGYLPGLDTYNNLIESLCESHHATEALLL 496

Query: 487 KSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCK 546
           K+EM+ +N K ++ +Y+ LI CLC  NR+ +GE LM EM ESG+ PD +ICR LI GYC 
Sbjct: 497 KAEMICKNIKPNLTTYRTLICCLCQTNRTAEGESLMEEMTESGLAPDPEICRALIKGYCN 556

Query: 547 EGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGFVPNSLT 606
           E +V KAE+LL  FAK+F+ FD+ES+NALV+   + G+  +L++LQ+RM+K+GF PNSLT
Sbjct: 557 ERDVDKAEALLGFFAKEFQVFDSESYNALVQVLCEDGDMAKLLELQERMMKLGFAPNSLT 616

Query: 607 CRYVIHGLWKSARLDKRRV 626
            +YVIHGLWK+A  DK ++
Sbjct: 617 FKYVIHGLWKTATPDKEKL 635

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP409_ARATH6.0e-17351.18Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana GN... [more]
PP432_ARATH3.3e-6229.78Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN... [more]
PP407_ARATH1.2e-6128.76Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PPR27_ARATH1.2e-6128.32Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana GN... [more]
PP360_ARATH1.4e-6027.09Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0KSF1_CUCSA2.1e-29780.09Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523120 PE=4 SV=1[more]
M5WUJ9_PRUPE8.3e-23063.77Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017372mg PE=4 S... [more]
W9SPY3_9ROSA3.3e-21859.26Uncharacterized protein OS=Morus notabilis GN=L484_020550 PE=4 SV=1[more]
A5B987_VITVI8.0e-21759.34Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038361 PE=4 SV=1[more]
A0A067LPH7_JATCU2.6e-21560.36Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10269 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G40400.13.4e-17451.18 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G55840.11.8e-6329.78 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G09820.17.0e-6328.32 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G39710.17.0e-6328.76 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G01110.17.7e-6227.09 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778703656|ref|XP_004142850.2|3.0e-29780.09PREDICTED: pentatricopeptide repeat-containing protein At5g40400 [Cucumis sativu... [more]
gi|659117805|ref|XP_008458797.1|1.5e-29379.59PREDICTED: pentatricopeptide repeat-containing protein At5g40400 [Cucumis melo][more]
gi|645249013|ref|XP_008230554.1|5.3e-23062.26PREDICTED: pentatricopeptide repeat-containing protein At5g40400 [Prunus mume][more]
gi|595948704|ref|XP_007216273.1|1.2e-22963.77hypothetical protein PRUPE_ppa017372mg, partial [Prunus persica][more]
gi|694411514|ref|XP_009334116.1|1.6e-22159.77PREDICTED: pentatricopeptide repeat-containing protein At5g40400 [Pyrus x bretsc... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G028180.1CmoCh04G028180.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 539..557
score: 0.0041coord: 187..215
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 357..404
score: 9.3E-16coord: 217..266
score: 4.6E-9coord: 287..336
score: 2.6E-19coord: 462..510
score: 4.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 466..498
score: 2.3E-5coord: 185..219
score: 8.6E-4coord: 290..323
score: 1.0E-10coord: 255..289
score: 2.3E-6coord: 501..533
score: 0.0019coord: 325..359
score: 2.3E-10coord: 360..393
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 533..563
score: 7.267coord: 428..462
score: 7.837coord: 393..427
score: 8.802coord: 218..252
score: 8.188coord: 288..322
score: 14.535coord: 463..497
score: 9.876coord: 183..217
score: 10.501coord: 253..287
score: 11.4coord: 128..158
score: 5.645coord: 498..532
score: 8.736coord: 323..357
score: 13.439coord: 358..392
score: 13.855coord: 568..602
score: 8
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 291..385
score: 8.4E-12coord: 136..255
score: 8.4
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 11..70
score: 1.7E-252coord: 179..609
score: 1.7E-252coord: 106..158
score: 1.7E
NoneNo IPR availablePANTHERPTHR24015:SF657SUBFAMILY NOT NAMEDcoord: 179..609
score: 1.7E-252coord: 11..70
score: 1.7E-252coord: 106..158
score: 1.7E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 194..383
score: 3.1

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G028180Cucurbita moschata (Rifu)cmocmoB073
CmoCh04G028180Cucurbita moschata (Rifu)cmocmoB122
CmoCh04G028180Cucurbita moschata (Rifu)cmocmoB123
CmoCh04G028180Cucurbita moschata (Rifu)cmocmoB220
CmoCh04G028180Cucurbita moschata (Rifu)cmocmoB261
CmoCh04G028180Cucumber (Gy14) v1cgycmoB0939
CmoCh04G028180Cucurbita maxima (Rimu)cmacmoB157
CmoCh04G028180Cucurbita maxima (Rimu)cmacmoB266
CmoCh04G028180Cucurbita maxima (Rimu)cmacmoB308
CmoCh04G028180Wild cucumber (PI 183967)cmocpiB705
CmoCh04G028180Cucumber (Chinese Long) v2cmocuB695
CmoCh04G028180Melon (DHL92) v3.5.1cmomeB677
CmoCh04G028180Watermelon (Charleston Gray)cmowcgB611
CmoCh04G028180Watermelon (97103) v1cmowmB650
CmoCh04G028180Cucurbita pepo (Zucchini)cmocpeB657
CmoCh04G028180Cucurbita pepo (Zucchini)cmocpeB701
CmoCh04G028180Cucurbita pepo (Zucchini)cmocpeB704
CmoCh04G028180Bottle gourd (USVL1VR-Ls)cmolsiB641
CmoCh04G028180Bottle gourd (USVL1VR-Ls)cmolsiB647
CmoCh04G028180Bottle gourd (USVL1VR-Ls)cmolsiB688
CmoCh04G028180Cucumber (Gy14) v2cgybcmoB121
CmoCh04G028180Cucumber (Gy14) v2cgybcmoB122
CmoCh04G028180Cucumber (Gy14) v2cgybcmoB395
CmoCh04G028180Melon (DHL92) v3.6.1cmomedB713
CmoCh04G028180Melon (DHL92) v3.6.1cmomedB747
CmoCh04G028180Melon (DHL92) v3.6.1cmomedB766
CmoCh04G028180Silver-seed gourdcarcmoB0370
CmoCh04G028180Silver-seed gourdcarcmoB0501
CmoCh04G028180Silver-seed gourdcarcmoB0506
CmoCh04G028180Silver-seed gourdcarcmoB0593
CmoCh04G028180Cucumber (Chinese Long) v3cmocucB0801
CmoCh04G028180Cucumber (Chinese Long) v3cmocucB0802
CmoCh04G028180Cucumber (Chinese Long) v3cmocucB0824
CmoCh04G028180Watermelon (97103) v2cmowmbB685
CmoCh04G028180Wax gourdcmowgoB0812