CmoCh04G027890 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G027890
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	BAG family molecular chaperone regulator 3
Location	Cmo_Chr04 : 20081022 .. 20082349 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGTAACATGGGCATTTGAAAACATTTTTAAAAAAAAATCTAAGAATTAAATAGAAAATATGATACTTTAATCAATTCTTCTTTTTTTTGCTCTTCGTTTGTCGTCACATGTGTTATCTCCCATTATATAATAACCTTCACCATCTCCATCCTTTTTGAGTTGAGAGCAAAAGGATAAAGAAGCAAAGATGATGAAGCTCAGGTCAAAGAGGTTCTGCAGAAGCTCCACTTTCAGGTTTGGAAGCTTTGTCAGCAGCTGCAACAACAAGATCAAAGTCGCCGATGACCACGACGAGGACGATGGCAGCCTGACGGAAATCAAGTGGGAGCTCCGGCCCGGAGGCATGCTGGTGCAGAGGAGAGAGATCGCCGGTGGATCCACTTTGACCGGAGAAGAAACAATCACTATTAGAGTCTCAACTGTCTCGCAATTCCATCACATTTCGGTCGAACCCACCTCAACTTTTGGTAAGTTTCAATTCCACGTTTAACTAATTTACGGAATGAACATGGATTTAGAAATACATTTTCACGGTTACGAGGCCTTTTGTGGTAGCTCAAAGCAAAGCCACAAAAGCTTATGTTTAAAGTTGACAATATCATACCCCAGTAGAGATACATAATTCCTAACCAACTCCGCTCTACTAAAAATCAAAACTTTCATGGAAAATTAGATGGGTTTTGTTTGAATTTCAATAAAAACCAAAACTTTGGTGGAAAATTTGATGGGTTTTGTTTGAATTTCAATAAAAATCAAAACTTTGTTGAAAAATTTGATGGGTTTTGTTTGAATTTCAATTTGGATTATAAAGTAATTGATGGGTTTAATTGTGTGATTTTGTCAGGGGAATTGAAGATGATTCTATCAATGGTGAGTGGGTTAGAACCAAGAGAGCAAAGATTGCTATTCAAAGGGAAAGAGAGAGAGGACGGTGAGTATCTACACATGGTTGGAGTGGGAGACAAAGACAAAGTTCTTCTTCTCCAAGATCCAGCGATCAAAGACAGGAAGCTTCATGGCTTGGCAGCAGGGCAGCCAATTAGTGTATAATAATAATACAATTAGCATTAATTAATCAAAAATCAAGCATGTTTTTGATACCACTAACCCTCAGGAAAATGCCAAACTGTTCGTCCTTGAAGGCCTTTTGTTTTGTTTTGTTTTGTAAGAATTGTGGTGGTTTTTCAGTATAATGTTTGAGCTTTAATACAAAATGGCTTGTCTGTAATGTGTTGATGCTTGTCTGAGTCATTATGTTTGTTGATTTTTGTATCCAAACAAAGATTGATTCTGAAAGAATGCATCTCCAGATCTCCTATACCCACC

mRNA sequence

GGTGTAACATGGGCATTTGAAAACATTTTTAAAAAAAAATCTAAGAATTAAATAGAAAATATGATACTTTAATCAATTCTTCTTTTTTTTGCTCTTCGTTTGTCGTCACATGTGTTATCTCCCATTATATAATAACCTTCACCATCTCCATCCTTTTTGAGTTGAGAGCAAAAGGATAAAGAAGCAAAGATGATGAAGCTCAGGTCAAAGAGGTTCTGCAGAAGCTCCACTTTCAGGTTTGGAAGCTTTGTCAGCAGCTGCAACAACAAGATCAAAGTCGCCGATGACCACGACGAGGACGATGGCAGCCTGACGGAAATCAAGTGGGAGCTCCGGCCCGGAGGCATGCTGGTGCAGAGGAGAGAGATCGCCGGTGGATCCACTTTGACCGGAGAAGAAACAATCACTATTAGAGTCTCAACTGTCTCGCAATTCCATCACATTTCGGTCGAACCCACCTCAACTTTTGGGGAATTGAAGATGATTCTATCAATGGTGAGTGGGTTAGAACCAAGAGAGCAAAGATTGCTATTCAAAGGGAAAGAGAGAGAGGACGGTGAGTATCTACACATGGTTGGAGTGGGAGACAAAGACAAAGTTCTTCTTCTCCAAGATCCAGCGATCAAAGACAGGAAGCTTCATGGCTTGGCAGCAGGGCAGCCAATTAGTGTATAATAATAATACAATTAGCATTAATTAATCAAAAATCAAGCATGTTTTTGATACCACTAACCCTCAGGAAAATGCCAAACTGTTCGTCCTTGAAGGCCTTTTGTTTTGTTTTGTTTTGTAAGAATTGTGGTGGTTTTTCAGTATAATGTTTGAGCTTTAATACAAAATGGCTTGTCTGTAATGTGTTGATGCTTGTCTGAGTCATTATGTTTGTTGATTTTTGTATCCAAACAAAGATTGATTCTGAAAGAATGCATCTCCAGATCTCCTATACCCACC

Coding sequence (CDS)

ATGATGAAGCTCAGGTCAAAGAGGTTCTGCAGAAGCTCCACTTTCAGGTTTGGAAGCTTTGTCAGCAGCTGCAACAACAAGATCAAAGTCGCCGATGACCACGACGAGGACGATGGCAGCCTGACGGAAATCAAGTGGGAGCTCCGGCCCGGAGGCATGCTGGTGCAGAGGAGAGAGATCGCCGGTGGATCCACTTTGACCGGAGAAGAAACAATCACTATTAGAGTCTCAACTGTCTCGCAATTCCATCACATTTCGGTCGAACCCACCTCAACTTTTGGGGAATTGAAGATGATTCTATCAATGGTGAGTGGGTTAGAACCAAGAGAGCAAAGATTGCTATTCAAAGGGAAAGAGAGAGAGGACGGTGAGTATCTACACATGGTTGGAGTGGGAGACAAAGACAAAGTTCTTCTTCTCCAAGATCCAGCGATCAAAGACAGGAAGCTTCATGGCTTGGCAGCAGGGCAGCCAATTAGTGTATAA

Homology

[Close]

BLAST of CmoCh04G027890 vs. Swiss-Prot
Match: BAG2_ARATH (BAG family molecular chaperone regulator 2 OS=Arabidopsis thaliana GN=BAG2 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.7e-15
Identity = 43/104 (41.35%), Postives = 67/104 (64.42%), Query Frame = 1


Query: 47  ELRPGGMLVQRREIAGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGL 106
           ELRPGGM+VQ+R     S   G   I +RV   S  H IS+   STFGELK ILS  +G+
Sbjct: 17  ELRPGGMVVQKRTDHSSSVPRG---IRVRVKYGSVHHEISINSQSTFGELKKILSGATGV 76

Query: 107 EPREQRLLFKGKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRKL 151
             ++ ++++K KER+   +L + GV D+ K++L++DP  ++++L
Sbjct: 77  HHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRL 117

[Close]

BLAST of CmoCh04G027890 vs. Swiss-Prot
Match: BAG3_ARATH (BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana GN=BAG3 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.2e-14
Identity = 40/112 (35.71%), Postives = 65/112 (58.04%), Query Frame = 1


Query: 39  GSLTEIKWELRPGGMLVQRREIAGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKM 98
           G  +  +WE RPGGM+VQRR               +RV   S +H I++   S+FGELK 
Sbjct: 15  GGTSGNEWESRPGGMVVQRRTDQNSDV---PRVFRVRVKYGSVYHEININSQSSFGELKK 74

Query: 99  ILSMVSGLEPREQRLLFKGKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRKL 151
           +LS   GL   + ++L+K KER+   +L + GV D+ K+++ +DP  ++++L
Sbjct: 75  MLSDQVGLHHEDMKVLYKDKERDSKMFLDLCGVKDRSKLVVKEDPISQEKRL 123

[Close]

BLAST of CmoCh04G027890 vs. Swiss-Prot
Match: BAG4_ARATH (BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana GN=BAG4 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.2e-14
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1


Query: 40  SLTEIKWELRPGGMLVQRREIAGGS-----------TLTGEETITIRVSTVSQFHHISVE 99
           S  E +WE+RPGGMLVQRR+ A  S           +    +TI I VS  S  H + + 
Sbjct: 5   STEESEWEVRPGGMLVQRRDDAASSDHKPLQDPDSASAAFAQTIRITVSHGSSHHDLHIS 64

Query: 100 PTSTFGELKMILSMVSGLEPREQRLLFKGKEREDGEYLHMVGVGDKDKVLLLQDPAIK 147
             +TFG++K  L   +GLE  E ++LF+G ER+D E L   GV D  K++++ +   K
Sbjct: 65  AHATFGDVKKALVQKTGLEASELKILFRGVERDDAEQLQAAGVKDASKLVVVVEDTNK 122

[Close]

BLAST of CmoCh04G027890 vs. Swiss-Prot
Match: BAG1_ARATH (BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana GN=BAG1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-13
Identity = 38/107 (35.51%), Postives = 69/107 (64.49%), Query Frame = 1


Query: 47  ELRPGGMLVQRR----EIAGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKMILSM 106
           E+RPGGMLVQ+R    +  G         I +R+   + +H I++ P ++FGELK +L+ 
Sbjct: 41  EIRPGGMLVQKRNPDLDPVGPPP---PPMIRVRIKYGAVYHEINISPQASFGELKKMLTG 100

Query: 107 VSGLEPREQRLLFKGKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRK 150
            +G+  ++Q+L++K KER+   +L + GV DK K++L++DP  ++++
Sbjct: 101 PTGIHHQDQKLMYKDKERDSKAFLDVSGVKDKSKMVLIEDPLSQEKR 144

[Close]

BLAST of CmoCh04G027890 vs. TrEMBL
Match: A0A0A0KNY5_CUCSA (Protein binding protein OS=Cucumis sativus GN=Csa_5G517800 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 3.9e-67
Identity = 140/166 (84.34%), Postives = 148/166 (89.16%), Query Frame = 1


Query: 1   MMKLRSKRFCRSSTFRFG--SFVSSCNNKIKVADDHDEDDGS--LTEIKWELRPGGMLVQ 60
           MMKLRSKRFCRSSTF+FG  SFV+SCNNKIKVADDH +D  S  LTEIKWELRPGGMLVQ
Sbjct: 2   MMKLRSKRFCRSSTFKFGITSFVTSCNNKIKVADDHHKDSSSAALTEIKWELRPGGMLVQ 61

Query: 61  RREIAGGSTLTGE-ETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGLEPREQRLLF 120
           RREIAG STL GE ETITIRVSTVSQFH ISV+PTSTFGELKMILSMV+GLE +EQRLLF
Sbjct: 62  RREIAGQSTLPGEDETITIRVSTVSQFHDISVQPTSTFGELKMILSMVTGLEAKEQRLLF 121

Query: 121 KGKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRKLHGLAAGQPISV 162
           KGKER+D EYLHMVGVG K KVLLLQDPAIK+RKLH LA  QPISV
Sbjct: 122 KGKERDDCEYLHMVGVGHKHKVLLLQDPAIKERKLHALATTQPISV 167

[Close]

BLAST of CmoCh04G027890 vs. TrEMBL
Match: B9SLT0_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0531000 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.2e-49
Identity = 105/159 (66.04%), Postives = 127/159 (79.87%), Query Frame = 1


Query: 1   MMKLRSKRFCRSSTFRFGSFVSSCNNKIKVADDHDEDDGSLTEIKWELRPGGMLVQRREI 60
           M+KLRSKRFCR S F+ G   ++ NN +K ++       + +EIKWELRPGGMLVQ+RE 
Sbjct: 1   MIKLRSKRFCRGS-FKLGGINNNSNNSVKGSEKGSCGSINNSEIKWELRPGGMLVQKRE- 60

Query: 61  AGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGLEPREQRLLFKGKER 120
            G S     E IT++VST+SQ+H IS+E TSTFGELKM+LS+V+GLEPREQRLLFKGKER
Sbjct: 61  CGDSV---GELITVKVSTLSQWHDISIEATSTFGELKMVLSLVTGLEPREQRLLFKGKER 120

Query: 121 EDGEYLHMVGVGDKDKVLLLQDPAIKDRKLHGLAAGQPI 160
           EDGEYLHM+GV DKDKV LL+DPAIK+RKLH +A GQPI
Sbjct: 121 EDGEYLHMLGVRDKDKVFLLEDPAIKERKLHSMAGGQPI 154

[Close]

BLAST of CmoCh04G027890 vs. TrEMBL
Match: A0A061EDX8_THECC (Binding protein, putative OS=Theobroma cacao GN=TCM_017044 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.0e-48
Identity = 107/159 (67.30%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 1   MMKLRSKRFCRSSTFRFGSFVSSCNNKIKVADDHDEDDGSLTEIKWELRPGGMLVQRREI 60
           M+KL+SKRFCR S F+FGS  +  +   KVA+   +  G+++EIKWELRPGGMLVQ+RE 
Sbjct: 1   MIKLKSKRFCRGS-FKFGSGGNGGSGNAKVAE---KVCGNMSEIKWELRPGGMLVQKRET 60

Query: 61  AGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGLEPREQRLLFKGKER 120
            G     GE  IT+RVSTVSQ+H IS+E TSTFG+LKMILS+V+ LEPREQRLLFKGKER
Sbjct: 61  GGS---VGEGVITVRVSTVSQWHDISIEATSTFGDLKMILSLVTSLEPREQRLLFKGKER 120

Query: 121 EDGEYLHMVGVGDKDKVLLLQDPAIKDRKLHGLAAGQPI 160
           ED EYLHMVGV DKDKVLLL+DPAIK+ KLH LA  Q I
Sbjct: 121 EDDEYLHMVGVRDKDKVLLLEDPAIKEMKLHKLAGSQQI 152

[Close]

BLAST of CmoCh04G027890 vs. TrEMBL
Match: A0A067E335_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031040mg PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.8e-48
Identity = 113/163 (69.33%), Postives = 125/163 (76.69%), Query Frame = 1


Query: 1   MMKLRSKRFCRSSTFRFG----SFVSSCNNKIKVADDHDEDDGSLTEIKWELRPGGMLVQ 60
           M+KLRSKRFCR S F+ G    +  SS NN  + A        S  EIKWELRPGGMLVQ
Sbjct: 1   MIKLRSKRFCRRS-FKLGGNGNNNGSSSNNVKEAAARGCGGINSSHEIKWELRPGGMLVQ 60

Query: 61  RREIAGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGLEPREQRLLFK 120
           +RE    S   GE +ITIRVSTVS++H IS++ TSTFGELKMILSMVSGLEPREQRLLFK
Sbjct: 61  KRE----SGCEGEGSITIRVSTVSKWHDISIKATSTFGELKMILSMVSGLEPREQRLLFK 120

Query: 121 GKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRKLHGLAAGQPI 160
           GKERED E+LHMVGV DKDKVLLL+DPAIKD KLHGL  GQPI
Sbjct: 121 GKEREDNEFLHMVGVRDKDKVLLLEDPAIKDMKLHGLRGGQPI 158

[Close]

BLAST of CmoCh04G027890 vs. TrEMBL
Match: V4TJ37_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016973mg PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.4e-47
Identity = 112/163 (68.71%), Postives = 125/163 (76.69%), Query Frame = 1


Query: 1   MMKLRSKRFCRSSTFRFG----SFVSSCNNKIKVADDHDEDDGSLTEIKWELRPGGMLVQ 60
           M+KLRSKRFCRSS F+ G    +  SS NN  + A        S  EIKWELRPGGMLVQ
Sbjct: 1   MIKLRSKRFCRSS-FKLGGNGNNNGSSSNNVKEAAARGCGGINSSHEIKWELRPGGMLVQ 60

Query: 61  RREIAGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGLEPREQRLLFK 120
           +RE    S   GE +ITIRVSTVS++H IS+E TSTF +LKMILSMVSGLEPREQRLLFK
Sbjct: 61  KRE----SGCEGEGSITIRVSTVSKWHDISIEATSTFEKLKMILSMVSGLEPREQRLLFK 120

Query: 121 GKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRKLHGLAAGQPI 160
           GKERED E+LHMVGV DKDKVLLL+DPAIK+ KLHGL  GQPI
Sbjct: 121 GKEREDNEFLHMVGVRDKDKVLLLEDPAIKEMKLHGLRGGQPI 158

[Close]

BLAST of CmoCh04G027890 vs. TAIR10
Match: AT5G14360.1 (AT5G14360.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 2.5e-41
Identity = 92/158 (58.23%), Postives = 112/158 (70.89%), Query Frame = 1


Query: 1   MMKLRSKRFCRSSTFRFGSFVSSCNNKIKVADDHDEDDG--------SLTEIKWELRPGG 60
           MMK ++KRF      RFG F    NNK    D   +  G        S  EIKWELRPGG
Sbjct: 1   MMKFKTKRF----GIRFG-FGKRINNKGTQQDQQQKGVGNNNNNSSCSNCEIKWELRPGG 60

Query: 61  MLVQRREIAGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGLEPREQR 120
           MLVQ+R+ +      GE+ I+IRVST + FH +S+E TSTFGELKM+LS+++GLEP++QR
Sbjct: 61  MLVQKRQES-----IGEDLISIRVSTFAHFHDLSIEATSTFGELKMVLSLLTGLEPKQQR 120

Query: 121 LLFKGKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRKL 151
           L+FKGKERED EYLHMVGVGDKDKVLLL+DP  KD+KL
Sbjct: 121 LVFKGKEREDHEYLHMVGVGDKDKVLLLEDPGFKDKKL 148

[Close]

BLAST of CmoCh04G027890 vs. TAIR10
Match: AT5G40630.1 (AT5G40630.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 138.3 bits (347), Expect = 4.2e-33
Identity = 80/161 (49.69%), Postives = 104/161 (64.60%), Query Frame = 1


Query: 1   MMKLRSKRFC---------RSSTFRFGSFVSSCNNKIKVADDHDEDDGSLTE--IKWELR 60
           M KL +KRFC           +  R  S  SS ++   ++        S     IKWE+R
Sbjct: 1   MGKLMAKRFCIGFGCGRIGTGNNKRSSSSSSSSSSFSSLSSSSSSSSSSCNNNNIKWEMR 60

Query: 61  PGGMLVQRREIAGGSTLTGEETITIRVSTVSQF-HHISVEPTSTFGELKMILSMVSGLEP 120
           PGGMLVQ+R     +    E+ I++RVSTVSQ  + IS++  STFGELKM++++VSG+E 
Sbjct: 61  PGGMLVQKRSEDSNT----EDLISLRVSTVSQLSYEISIDANSTFGELKMMIAIVSGIEA 120

Query: 121 REQRLLFKGKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRK 150
           +EQRLLF+GKERED EYLHM+GVGD DKV LLQDPA K+ K
Sbjct: 121 KEQRLLFRGKEREDREYLHMIGVGDGDKVFLLQDPAFKELK 157

[Close]

BLAST of CmoCh04G027890 vs. TAIR10
Match: AT5G62100.1 (AT5G62100.1 BCL-2-associated athanogene 2)

HSP 1 Score: 84.0 bits (206), Expect = 9.5e-17
Identity = 43/104 (41.35%), Postives = 67/104 (64.42%), Query Frame = 1


Query: 47  ELRPGGMLVQRREIAGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGL 106
           ELRPGGM+VQ+R     S   G   I +RV   S  H IS+   STFGELK ILS  +G+
Sbjct: 17  ELRPGGMVVQKRTDHSSSVPRG---IRVRVKYGSVHHEISINSQSTFGELKKILSGATGV 76

Query: 107 EPREQRLLFKGKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRKL 151
             ++ ++++K KER+   +L + GV D+ K++L++DP  ++++L
Sbjct: 77  HHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRL 117

[Close]

BLAST of CmoCh04G027890 vs. TAIR10
Match: AT5G07220.1 (AT5G07220.1 BCL-2-associated athanogene 3)

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-15
Identity = 40/112 (35.71%), Postives = 65/112 (58.04%), Query Frame = 1


Query: 39  GSLTEIKWELRPGGMLVQRREIAGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKM 98
           G  +  +WE RPGGM+VQRR               +RV   S +H I++   S+FGELK 
Sbjct: 15  GGTSGNEWESRPGGMVVQRRTDQNSDV---PRVFRVRVKYGSVYHEININSQSSFGELKK 74

Query: 99  ILSMVSGLEPREQRLLFKGKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRKL 151
           +LS   GL   + ++L+K KER+   +L + GV D+ K+++ +DP  ++++L
Sbjct: 75  MLSDQVGLHHEDMKVLYKDKERDSKMFLDLCGVKDRSKLVVKEDPISQEKRL 123

[Close]

BLAST of CmoCh04G027890 vs. TAIR10
Match: AT3G51780.1 (AT3G51780.1 BCL-2-associated athanogene 4)

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-15
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1


Query: 40  SLTEIKWELRPGGMLVQRREIAGGS-----------TLTGEETITIRVSTVSQFHHISVE 99
           S  E +WE+RPGGMLVQRR+ A  S           +    +TI I VS  S  H + + 
Sbjct: 5   STEESEWEVRPGGMLVQRRDDAASSDHKPLQDPDSASAAFAQTIRITVSHGSSHHDLHIS 64

Query: 100 PTSTFGELKMILSMVSGLEPREQRLLFKGKEREDGEYLHMVGVGDKDKVLLLQDPAIK 147
             +TFG++K  L   +GLE  E ++LF+G ER+D E L   GV D  K++++ +   K
Sbjct: 65  AHATFGDVKKALVQKTGLEASELKILFRGVERDDAEQLQAAGVKDASKLVVVVEDTNK 122

[Close]

BLAST of CmoCh04G027890 vs. NCBI nr
Match: gi|449450038|ref|XP_004142771.1| (PREDICTED: BAG family molecular chaperone regulator 2-like [Cucumis sativus])

HSP 1 Score: 262.3 bits (669), Expect = 5.5e-67
Identity = 140/166 (84.34%), Postives = 148/166 (89.16%), Query Frame = 1


Query: 1   MMKLRSKRFCRSSTFRFG--SFVSSCNNKIKVADDHDEDDGS--LTEIKWELRPGGMLVQ 60
           MMKLRSKRFCRSSTF+FG  SFV+SCNNKIKVADDH +D  S  LTEIKWELRPGGMLVQ
Sbjct: 2   MMKLRSKRFCRSSTFKFGITSFVTSCNNKIKVADDHHKDSSSAALTEIKWELRPGGMLVQ 61

Query: 61  RREIAGGSTLTGE-ETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGLEPREQRLLF 120
           RREIAG STL GE ETITIRVSTVSQFH ISV+PTSTFGELKMILSMV+GLE +EQRLLF
Sbjct: 62  RREIAGQSTLPGEDETITIRVSTVSQFHDISVQPTSTFGELKMILSMVTGLEAKEQRLLF 121

Query: 121 KGKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRKLHGLAAGQPISV 162
           KGKER+D EYLHMVGVG K KVLLLQDPAIK+RKLH LA  QPISV
Sbjct: 122 KGKERDDCEYLHMVGVGHKHKVLLLQDPAIKERKLHALATTQPISV 167

[Close]

BLAST of CmoCh04G027890 vs. NCBI nr
Match: gi|659117910|ref|XP_008458851.1| (PREDICTED: BAG family molecular chaperone regulator 2-like [Cucumis melo])

HSP 1 Score: 258.5 bits (659), Expect = 8.0e-66
Identity = 137/166 (82.53%), Postives = 147/166 (88.55%), Query Frame = 1


Query: 1   MMKLRSKRFCRSSTFRFGSFVSSCNNKIKVADDHDEDDGS----LTEIKWELRPGGMLVQ 60
           MMKLRSK+FCRSSTF+FG FV+SCNNKIKVADDH +D  +    LTEIKWELRPGGMLVQ
Sbjct: 2   MMKLRSKKFCRSSTFKFG-FVTSCNNKIKVADDHHKDSAAAAATLTEIKWELRPGGMLVQ 61

Query: 61  RREIAGGSTLTGE-ETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGLEPREQRLLF 120
           RREIAG STL GE ETITIRVSTVSQFH ISV+PTSTFGELKMILSMV+GLE +EQRLLF
Sbjct: 62  RREIAGQSTLAGEDETITIRVSTVSQFHDISVQPTSTFGELKMILSMVTGLEAKEQRLLF 121

Query: 121 KGKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRKLHGLAAGQPISV 162
           KGKER+D EYLHMVGVG K KVLLLQDPAIK+RKLH LA  QPISV
Sbjct: 122 KGKERDDCEYLHMVGVGHKHKVLLLQDPAIKERKLHALATTQPISV 166

[Close]

BLAST of CmoCh04G027890 vs. NCBI nr
Match: gi|255572016|ref|XP_002526949.1| (PREDICTED: BAG family molecular chaperone regulator 2 [Ricinus communis])

HSP 1 Score: 201.8 bits (512), Expect = 8.9e-49
Identity = 105/159 (66.04%), Postives = 127/159 (79.87%), Query Frame = 1


Query: 1   MMKLRSKRFCRSSTFRFGSFVSSCNNKIKVADDHDEDDGSLTEIKWELRPGGMLVQRREI 60
           M+KLRSKRFCR S F+ G   ++ NN +K ++       + +EIKWELRPGGMLVQ+RE 
Sbjct: 1   MIKLRSKRFCRGS-FKLGGINNNSNNSVKGSEKGSCGSINNSEIKWELRPGGMLVQKRE- 60

Query: 61  AGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGLEPREQRLLFKGKER 120
            G S     E IT++VST+SQ+H IS+E TSTFGELKM+LS+V+GLEPREQRLLFKGKER
Sbjct: 61  CGDSV---GELITVKVSTLSQWHDISIEATSTFGELKMVLSLVTGLEPREQRLLFKGKER 120

Query: 121 EDGEYLHMVGVGDKDKVLLLQDPAIKDRKLHGLAAGQPI 160
           EDGEYLHM+GV DKDKV LL+DPAIK+RKLH +A GQPI
Sbjct: 121 EDGEYLHMLGVRDKDKVFLLEDPAIKERKLHSMAGGQPI 154

[Close]

BLAST of CmoCh04G027890 vs. NCBI nr
Match: gi|590646685|ref|XP_007031691.1| (Binding protein, putative [Theobroma cacao])

HSP 1 Score: 199.1 bits (505), Expect = 5.8e-48
Identity = 107/159 (67.30%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 1   MMKLRSKRFCRSSTFRFGSFVSSCNNKIKVADDHDEDDGSLTEIKWELRPGGMLVQRREI 60
           M+KL+SKRFCR S F+FGS  +  +   KVA+   +  G+++EIKWELRPGGMLVQ+RE 
Sbjct: 1   MIKLKSKRFCRGS-FKFGSGGNGGSGNAKVAE---KVCGNMSEIKWELRPGGMLVQKRET 60

Query: 61  AGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGLEPREQRLLFKGKER 120
            G     GE  IT+RVSTVSQ+H IS+E TSTFG+LKMILS+V+ LEPREQRLLFKGKER
Sbjct: 61  GGS---VGEGVITVRVSTVSQWHDISIEATSTFGDLKMILSLVTSLEPREQRLLFKGKER 120

Query: 121 EDGEYLHMVGVGDKDKVLLLQDPAIKDRKLHGLAAGQPI 160
           ED EYLHMVGV DKDKVLLL+DPAIK+ KLH LA  Q I
Sbjct: 121 EDDEYLHMVGVRDKDKVLLLEDPAIKEMKLHKLAGSQQI 152

[Close]

BLAST of CmoCh04G027890 vs. NCBI nr
Match: gi|641826442|gb|KDO45662.1| (hypothetical protein CISIN_1g031040mg [Citrus sinensis])

HSP 1 Score: 198.4 bits (503), Expect = 9.8e-48
Identity = 113/163 (69.33%), Postives = 125/163 (76.69%), Query Frame = 1


Query: 1   MMKLRSKRFCRSSTFRFG----SFVSSCNNKIKVADDHDEDDGSLTEIKWELRPGGMLVQ 60
           M+KLRSKRFCR S F+ G    +  SS NN  + A        S  EIKWELRPGGMLVQ
Sbjct: 1   MIKLRSKRFCRRS-FKLGGNGNNNGSSSNNVKEAAARGCGGINSSHEIKWELRPGGMLVQ 60

Query: 61  RREIAGGSTLTGEETITIRVSTVSQFHHISVEPTSTFGELKMILSMVSGLEPREQRLLFK 120
           +RE    S   GE +ITIRVSTVS++H IS++ TSTFGELKMILSMVSGLEPREQRLLFK
Sbjct: 61  KRE----SGCEGEGSITIRVSTVSKWHDISIKATSTFGELKMILSMVSGLEPREQRLLFK 120

Query: 121 GKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRKLHGLAAGQPI 160
           GKERED E+LHMVGV DKDKVLLL+DPAIKD KLHGL  GQPI
Sbjct: 121 GKEREDNEFLHMVGVRDKDKVLLLEDPAIKDMKLHGLRGGQPI 158

The following BLAST results are available for this feature:

BLAST of CmoCh04G027890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BAG2_ARATH	1.7e-15	41.35	BAG family molecular chaperone regulator 2 OS=Arabidopsis thaliana GN=BAG2 PE=1 ...	[more]
BAG3_ARATH	4.2e-14	35.71	BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana GN=BAG3 PE=1 ...	[more]
BAG4_ARATH	4.2e-14	38.14	BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana GN=BAG4 PE=1 ...	[more]
BAG1_ARATH	2.7e-13	35.51	BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana GN=BAG1 PE=1 ...	[more]

BLAST of CmoCh04G027890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNY5_CUCSA	3.9e-67	84.34	Protein binding protein OS=Cucumis sativus GN=Csa_5G517800 PE=4 SV=1	[more]
B9SLT0_RICCO	6.2e-49	66.04	Protein binding protein, putative OS=Ricinus communis GN=RCOM_0531000 PE=4 SV=1	[more]
A0A061EDX8_THECC	4.0e-48	67.30	Binding protein, putative OS=Theobroma cacao GN=TCM_017044 PE=4 SV=1	[more]
A0A067E335_CITSI	6.8e-48	69.33	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031040mg PE=4 SV=1	[more]
V4TJ37_9ROSI	4.4e-47	68.71	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016973mg PE=4 SV=1	[more]

BLAST of CmoCh04G027890 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G14360.1	2.5e-41	58.23	Ubiquitin-like superfamily protein	[more]
AT5G40630.1	4.2e-33	49.69	Ubiquitin-like superfamily protein	[more]
AT5G62100.1	9.5e-17	41.35	BCL-2-associated athanogene 2	[more]
AT5G07220.1	2.3e-15	35.71	BCL-2-associated athanogene 3	[more]
AT3G51780.1	2.3e-15	38.14	BCL-2-associated athanogene 4	[more]

BLAST of CmoCh04G027890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450038\|ref\|XP_004142771.1\|	5.5e-67	84.34	PREDICTED: BAG family molecular chaperone regulator 2-like [Cucumis sativus]	[more]
gi\|659117910\|ref\|XP_008458851.1\|	8.0e-66	82.53	PREDICTED: BAG family molecular chaperone regulator 2-like [Cucumis melo]	[more]
gi\|255572016\|ref\|XP_002526949.1\|	8.9e-49	66.04	PREDICTED: BAG family molecular chaperone regulator 2 [Ricinus communis]	[more]
gi\|590646685\|ref\|XP_007031691.1\|	5.8e-48	67.30	Binding protein, putative [Theobroma cacao]	[more]
gi\|641826442\|gb\|KDO45662.1\|	9.8e-48	69.33	hypothetical protein CISIN_1g031040mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G027890.1	CmoCh04G027890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin domain	PFAM	PF00240	ubiquitin	coord: 72..141 score: 9.1
IPR000626	Ubiquitin domain	PROFILE	PS50053	UBIQUITIN_2	coord: 72..140 score: 14
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 67..144 score: 2.9
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 28..142 score: 4.2
None	No IPR available	PANTHER	PTHR10666:SF127	SUBFAMILY NOT NAMED	coord: 28..142 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G027890	Cucsa.011010	Cucumber (Gy14) v1	cgycmoB0544
CmoCh04G027890	CmaCh15G003750	Cucurbita maxima (Rimu)	cmacmoB308
CmoCh04G027890	CmaCh04G026620	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G027890	Cla004644	Watermelon (97103) v1	cmowmB646
CmoCh04G027890	Csa5G517800	Cucumber (Chinese Long) v2	cmocuB716
CmoCh04G027890	MELO3C021609	Melon (DHL92) v3.5.1	cmomeB624
CmoCh04G027890	ClCG09G019530	Watermelon (Charleston Gray)	cmowcgB608
CmoCh04G027890	CSPI05G17940	Wild cucumber (PI 183967)	cmocpiB724
CmoCh04G027890	Lsi02G016160	Bottle gourd (USVL1VR-Ls)	cmolsiB640
CmoCh04G027890	Cp4.1LG13g09280	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G027890	Cp4.1LG01g23800	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G027890	MELO3C021609.2	Melon (DHL92) v3.6.1	cmomedB713
CmoCh04G027890	CsaV3_5G026850	Cucumber (Chinese Long) v3	cmocucB0848
CmoCh04G027890	Cla97C09G180970	Watermelon (97103) v2	cmowmbB772
CmoCh04G027890	Bhi06G000506	Wax gourd	cmowgoB0836
CmoCh04G027890	CsGy5G017620	Cucumber (Gy14) v2	cgybcmoB626
CmoCh04G027890	Carg04482	Silver-seed gourd	carcmoB0940
CmoCh04G027890	Carg02337	Silver-seed gourd	carcmoB0370

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G027890	CmoCh15G003860	Cucurbita moschata (Rifu)	cmocmoB261

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G027890	Cucumber (Chinese Long) v3	cmocucB0869
CmoCh04G027890	Cucurbita pepo (Zucchini)	cmocpeB701
CmoCh04G027890	Melon (DHL92) v3.6.1	cmomedB730