CmoCh04G024650 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGATGTGGGTATTCGGGTACGGGTCTCTCATTTGGAAAACTGGCTTCCCCTACGACGAAAAGTTACCCGGCTGTATCAAAGGCTACCGCCGTGTCTTCTATCAAGGTCCCCATTCGACCGATTTCTCTCTGTTTTTTGGATTTCTTCTATATATATCTTTCTGTTTGATTTGTGCGTGTTTTTTGTTACTAGGGAGTACTGATCATAGAGGCACGCCTGAATATCCTGGAAGAACTGTGACATTGGAGCCTGCAGAAGGGGAAGTTTGTGTATGTTCTTTAAAACCCCACTTTAATTTCTCTGCACAGAAACCACTTTAGTTATGGATTGTGATTCTTGGTGTTCTGGGATTGATGAAAAGGTTTAGAGGTTATTGGTTTCAAACATTACAAGAAACCTTTTGGCTTTGTCTATGATGTTCTTAATTCTGTCTCTTGTACTGTTTGTCATCGGCTTAATGTTGTGGTTTTGGAAGAGGGAATTGTTTCTTGAGCTTAATGTTTAGCTTTTTTGGCTTCAAAAGTTCATATTATTCTGGAATTTTAGCTGTTACTGATTGGATTCCCCCCCTCTCCTTGATTAAGTGTATTGCCAAAGATGAATGTTGGGTTTAGTTTTGTAATTATGACTTGGCCTCTGTATTGTTTATGTATGGTGGAGTCTCCATTGTTTTGGGAAGGTTGGAATAAGTTGATATCATAGCTCTATAATTAGTGGAGTACTTAAGAGAAACATTGGCGTTGCTGATCTTTTGGGTGCAAAGTTGGTACCTGGCTGACACTGCTTTGGATTCTTGTTTATTCGGAGGAATATTAGCTTTAGGGGTTTGACGGTCGGAGATGGGAACGAAAGATTCTTTATAAGGGTGTGGAAACATCTCCTTAATAGACGTATTTTAAAACCTTGAGAGGAAACTCGAAAGGGAAAACCCAAAGAGAACAATCTTTGCTAGCGGTGGGCTTGAGCTTTTACAAATGGTATCAAAGCCAGGCACCGGGAGGTGTGCCAGCGAGGATGCTAGGCCCCAAAGGGGGTGGATTGTGAAATCCCACTTCGATTGGAGAGTGGAACAAAACATTCTTATAAAGGTGTGGAAACCTCTTCCTAACAAACGCGTTTTAAAACCTTGAGGAGAAGCCCGAAAGGGAAAGTTCAAAGAGGACAATATGTGCTAGCGGTGGACTTGGGCTGTTACAAATGGTATCAAAGTCAGGCATTGGGTGGTATACCAACGAGGACGCTGGGCCCCCAAGGGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGAGAACGAAACATTCCTTATAAGAGTGTGGAAACCTCTCCCTAACAGACGCCGTTTTAAAATTTTGAGGGGAAGTCCGAAAGGGAAAGCCCAAAGAGAACAACATCTACTAGCAGTGGGCTTGGGCTGTTACGGTATCAGAGCCAGGCATCGAGTGGTGTGCCAGCAAGGATGCTAGGCTCCCAAAGGGGATGGATTGTGAGATCCCACATCGGTTGGAGAGAGAAACGAAACATTCTTTATAAAGATGTGGAAACCTCTCCCTAATAGACACGTTTCTAAAGCAGTGAGCTTGAGTTGTTACAAATCCTCTCAAGAATTAGTGTGGTGGGTCATTTTTAAGACGTCAAATTCCACTATACTCAAGGGGTATGTTCATGTTATAAAATTATACTTTGGATTAACAAAGCTATTAAAGTGAGGCTAATTCATTCAACTTTTGTGGCCAAAGTGGGGCGTTGCATACAAGATCACCAGAAAAGAGGATAAAGAGACTGCACTAAATGTAAGTTCTTCAACTCTTTTCTATCTATAGACGTTATGTTATTTAGTAATTTTCATCTTTGATTGATCTGCATTGGGTAGCTCGATCGTTCATCGACCGACATTGTTCATCGATGTAACGACTTTCTTGATGATTTTTCTTCTGTTTTTGTCATGTGTTCCATAGCATTTAGAAGTGAGAGAGAAACAATATGACAAAAAAGAATATGTGGACTTTTTCAATGTAAGTTTCAGTTCATCCAAGGCTGAAGTATCTTAAGCGTTCTTGATATACTTGCTGCTGTTACCTTATTGAAAGCTGCTCAACTTTTTAGGACCCCATGGCTATCACCCCTGTTGTTTCTGGAGTAATGGTGTAAGTAGCGGTATTCAACAATGTATATTTACACTTGCTTTCTAGAGAATGATATGAGCAGCGAGTTCTATGCCACAGATATATTGCATCTCCAGACAAGAAGCTAAACAAGAATTACCTTGGCCCTGCCTCGCTCGAGGAGATTGCTAAGTACGTGTTCGATTTCGATACAATGTTTACACTTCTCACGCTTATTGAGACTTAAAATGATTAGTAGAATTGTTAAGTGTATCACATAGATTCCCAACCAGCCTACAATGAAAAACGTGTGAGATCCCACGTTGGTTGGTGAGGGGAACGAAGCATTGCTTATAAGGGCGTGGAAACCTGTCTCTAGCATACGCGTTTTAAAATTGTGAGGCTGAGGGTGATACATAATGGGCCAAAGCGGACAATATTTGCTAGTGGTGGACTTGGACTGTTACAAATGGTATTAGAGTCAGTCACTGGGGGGTGTGCCAGCGAGGATGTTGGGCCCCGAAGGGGGGTGGATTGTGAGATCCCACATTTGTTGGAGAGGGGAACGTAGCATTTTTTATAAGGGTGTGAAAATCTCTCCCTAGTAGACGCGTTTTAAAATTGTGAGGTTGATGATAATATGTAACAGGCCAAAGCGGACAATATCTGCTAGCAGTAGGCTTGGACTGTTACAAATGGTATTAGAGCCAGTCACCGGGCAGTGTGCCAGCGAGGACGTTGGGCTTCCAGGGAGGTGGATTGTGAGATCCCACATCAATTAAAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAGTCTCTCCCTAGCAGACGCGTTTTAAAACCGTGAGGCTAACGGTGATACGTAACGGGTCAAAGAGGATAATATCTGCTAGCGATGGACATGGGTTGTTACAAATGGTATCAAAGTCAGTCATTAGGAAGTGTGCTAGCAAGGACATTGGGCCTCCAAGGGAGGTGGAATGTGAGATCCCACGTTGGTTGGAGAGGGGAACAAAGCATTCCTTACAAGGGTGTGGAAACCTTTCCCTAACAGACGCATTTTAAAACCTCGAGGCTGACGGCGATATGTAATGGGCTAAAGCAGACAATATCTGCTAGCAGGGAGCATGGGCTATTACAAAACCGCAAACCAACCAACACTGAACCGATTAAACTGTCGGTTCATTGGTGGTGGTTGGTGATCATTTAAGTTCAATTTGACAGCATCAGAACTGCATGAATGTGCAGGCAGATAGTTGATGCGCAAGGGCCCTCAGGACCCAACAAGGACTACCTTTTTCAACTTGAAAAGGCTCTTCTCGAGTTTGGTAAGTTCCTGCTACTCTATAACATGTAGAATTTAGATCCAACTTGGCTTTTTCTCTTGTTTTGTGCTTAAATGTTCTTGCTGTTCAACCATTCTTTGCTCAGGATGGGAAGATAAACATGTCATGGATCTTGCAAATGAAGTCAGAACCCTTCTTTCTGACGGGGAGCACACTGATACTTAG ATGGTGATGTGGGTATTCGGGTACGGGTCTCTCATTTGGAAAACTGGCTTCCCCTACGACGAAAAGTTACCCGGCTGTATCAAAGGCTACCGCCGTGTCTTCTATCAAGGTCCCCATTCGACCGATTTCTCTCTGTTTTTTGGATTTCTTCTATATATATCTTTCTGTTTGATTTGTGCGTGTTTTTTGTTACTAGGGAGTACTGATCATAGAGGCACGCCTGAATATCCTGGAAGAACTGTGACATTGGAGCCTGCAGAAGGGGAATGGGGCGTTGCATACAAGATCACCAGAAAAGAGGATAAAGAGACTGCACTAAATCATTTAGAAGTGAGAGAGAAACAATATGACAAAAAAGAATATGTGGACTTTTTCAATGACCCCATGGCTATCACCCCTGTTGTTTCTGGAGTAATGGTATATATTGCATCTCCAGACAAGAAGCTAAACAAGAATTACCTTGGCCCTGCCTCGCTCGAGGAGATTGCTAAGCAGATAGTTGATGCGCAAGGGCCCTCAGGACCCAACAAGGACTACCTTTTTCAACTTGAAAAGGCTCTTCTCGAGTTTGGATGGGAAGATAAACATGTCATGGATCTTGCAAATGAAGTCAGAACCCTTCTTTCTGACGGGGAGCACACTGATACTTAG ATGGTGATGTGGGTATTCGGGTACGGGTCTCTCATTTGGAAAACTGGCTTCCCCTACGACGAAAAGTTACCCGGCTGTATCAAAGGCTACCGCCGTGTCTTCTATCAAGGTCCCCATTCGACCGATTTCTCTCTGTTTTTTGGATTTCTTCTATATATATCTTTCTGTTTGATTTGTGCGTGTTTTTTGTTACTAGGGAGTACTGATCATAGAGGCACGCCTGAATATCCTGGAAGAACTGTGACATTGGAGCCTGCAGAAGGGGAATGGGGCGTTGCATACAAGATCACCAGAAAAGAGGATAAAGAGACTGCACTAAATCATTTAGAAGTGAGAGAGAAACAATATGACAAAAAAGAATATGTGGACTTTTTCAATGACCCCATGGCTATCACCCCTGTTGTTTCTGGAGTAATGGTATATATTGCATCTCCAGACAAGAAGCTAAACAAGAATTACCTTGGCCCTGCCTCGCTCGAGGAGATTGCTAAGCAGATAGTTGATGCGCAAGGGCCCTCAGGACCCAACAAGGACTACCTTTTTCAACTTGAAAAGGCTCTTCTCGAGTTTGGATGGGAAGATAAACATGTCATGGATCTTGCAAATGAAGTCAGAACCCTTCTTTCTGACGGGGAGCACACTGATACTTAG
BLAST of CmoCh04G024650 vs. Swiss-Prot
Match: GCT23_ARATH (Gamma-glutamylcyclotransferase 2-3 OS=Arabidopsis thaliana GN=GGCT2;3 PE=1 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 1.2e-72 Identity = 139/217 (64.06%), Postives = 158/217 (72.81%), Query Frame = 1
BLAST of CmoCh04G024650 vs. Swiss-Prot
Match: GCT22_ARATH (Gamma-glutamylcyclotransferase 2-2 OS=Arabidopsis thaliana GN=GGCT2;2 PE=1 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 6.5e-47 Identity = 101/213 (47.42%), Postives = 132/213 (61.97%), Query Frame = 1
BLAST of CmoCh04G024650 vs. Swiss-Prot
Match: GCT21_ARATH (Gamma-glutamylcyclotransferase 2-1 OS=Arabidopsis thaliana GN=GGCT2;1 PE=1 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 5.5e-46 Identity = 99/211 (46.92%), Postives = 130/211 (61.61%), Query Frame = 1
BLAST of CmoCh04G024650 vs. Swiss-Prot
Match: CHAC2_CHICK (Putative glutathione-specific gamma-glutamylcyclotransferase 2 OS=Gallus gallus GN=chac2 PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.7e-31 Identity = 85/202 (42.08%), Postives = 110/202 (54.46%), Query Frame = 1
BLAST of CmoCh04G024650 vs. Swiss-Prot
Match: CHAC2_XENLA (Putative glutathione-specific gamma-glutamylcyclotransferase 2 OS=Xenopus laevis GN=chac2 PE=2 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 5.0e-31 Identity = 88/209 (42.11%), Postives = 112/209 (53.59%), Query Frame = 1
BLAST of CmoCh04G024650 vs. TrEMBL
Match: A0A0A0LLS5_CUCSA (Glutathione-specific gamma-glutamylcyclotransferase OS=Cucumis sativus GN=Csa_2G232470 PE=3 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 6.9e-88 Identity = 164/217 (75.58%), Postives = 177/217 (81.57%), Query Frame = 1
BLAST of CmoCh04G024650 vs. TrEMBL
Match: A0A061FH77_THECC (Glutathione-specific gamma-glutamylcyclotransferase OS=Theobroma cacao GN=TCM_035091 PE=3 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.5e-77 Identity = 147/214 (68.69%), Postives = 164/214 (76.64%), Query Frame = 1
BLAST of CmoCh04G024650 vs. TrEMBL
Match: A0A0D2V5U6_GOSRA (Glutathione-specific gamma-glutamylcyclotransferase OS=Gossypium raimondii GN=B456_010G049400 PE=3 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 3.6e-76 Identity = 144/216 (66.67%), Postives = 163/216 (75.46%), Query Frame = 1
BLAST of CmoCh04G024650 vs. TrEMBL
Match: M5XF20_PRUPE (Glutathione-specific gamma-glutamylcyclotransferase OS=Prunus persica GN=PRUPE_ppa011984mg PE=3 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 3.9e-75 Identity = 146/217 (67.28%), Postives = 164/217 (75.58%), Query Frame = 1
BLAST of CmoCh04G024650 vs. TrEMBL
Match: E0CR82_VITVI (Glutathione-specific gamma-glutamylcyclotransferase OS=Vitis vinifera GN=VIT_18s0001g03150 PE=3 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 5.2e-75 Identity = 143/216 (66.20%), Postives = 167/216 (77.31%), Query Frame = 1
BLAST of CmoCh04G024650 vs. TAIR10
Match: AT1G44790.1 (AT1G44790.1 ChaC-like family protein) HSP 1 Score: 274.2 bits (700), Expect = 6.7e-74 Identity = 139/217 (64.06%), Postives = 158/217 (72.81%), Query Frame = 1
BLAST of CmoCh04G024650 vs. TAIR10
Match: AT4G31290.1 (AT4G31290.1 ChaC-like family protein) HSP 1 Score: 188.7 bits (478), Expect = 3.7e-48 Identity = 101/213 (47.42%), Postives = 132/213 (61.97%), Query Frame = 1
BLAST of CmoCh04G024650 vs. TAIR10
Match: AT5G26220.1 (AT5G26220.1 ChaC-like family protein) HSP 1 Score: 185.7 bits (470), Expect = 3.1e-47 Identity = 99/211 (46.92%), Postives = 130/211 (61.61%), Query Frame = 1
BLAST of CmoCh04G024650 vs. NCBI nr
Match: gi|659133385|ref|XP_008466705.1| (PREDICTED: cation transport regulator-like protein 2 [Cucumis melo]) HSP 1 Score: 332.8 bits (852), Expect = 4.5e-88 Identity = 162/216 (75.00%), Postives = 177/216 (81.94%), Query Frame = 1
BLAST of CmoCh04G024650 vs. NCBI nr
Match: gi|449455246|ref|XP_004145364.1| (PREDICTED: putative glutathione-specific gamma-glutamylcyclotransferase 2 [Cucumis sativus]) HSP 1 Score: 331.6 bits (849), Expect = 1.0e-87 Identity = 164/217 (75.58%), Postives = 177/217 (81.57%), Query Frame = 1
BLAST of CmoCh04G024650 vs. NCBI nr
Match: gi|590598887|ref|XP_007019028.1| (ChaC-like family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 297.4 bits (760), Expect = 2.1e-77 Identity = 147/214 (68.69%), Postives = 164/214 (76.64%), Query Frame = 1
BLAST of CmoCh04G024650 vs. NCBI nr
Match: gi|1009136720|ref|XP_015885675.1| (PREDICTED: putative glutathione-specific gamma-glutamylcyclotransferase 2 [Ziziphus jujuba]) HSP 1 Score: 295.8 bits (756), Expect = 6.1e-77 Identity = 149/218 (68.35%), Postives = 167/218 (76.61%), Query Frame = 1
BLAST of CmoCh04G024650 vs. NCBI nr
Match: gi|823235033|ref|XP_012450149.1| (PREDICTED: putative glutathione-specific gamma-glutamylcyclotransferase 2 isoform X1 [Gossypium raimondii]) HSP 1 Score: 292.7 bits (748), Expect = 5.1e-76 Identity = 144/216 (66.67%), Postives = 163/216 (75.46%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |