Carg24447 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATCATCATCTCCCATTTATTAATCGGAAAAAAAAAATCTCCCCTCCACAACCGAGCGGAAATAACAGAGACGCCGTGCTCCGCCCTTACTCCGCCACTTCCGATCAAAAATGGTGATGTGGGTATTCGGGTACGGGTCTCTCATTTGGAAAACTGGCTTCCCCTACGACGAAAAGTTACCCGGCTGTATCAAAGGCTACCGCCGTGTCTTCTATCAAGGTCCCCATTCGACCGATTTCTCTCTGTTTTTTGGATTTCTTCTATATATATCTTTCTGTTTGATTTGTGCGTGTTTTTTGTTACTAGGGAGTACTGATCATAGAGGCACGCCTGAATATCCTGGAAGAACTGTGACATTGGAGCCTGCAGAAGGGGAAGTTTGTGTATGTTCTTGAAAACCCCACTTTAATTTCTCTGCACAAAAACCACTTTAGTTATGGATTGTGATTCTTGGTGTTCTGGGATTGATGAAAAGGTTTAGAGGTTATTGGTTTCAAACATTACAAGAAACCTTTTGGCTTTGACTATGATGTTCTTAATTCTGTGTCTTGTACTGTTTGTCATCGGCTTAATGTTGTGGTTTTGGAAGAGGGAATTGTTTCTTGAGCTTAATGTTTAGCTTTTTTGGCTTCAAAAGTTCATATTATTCTGGAATTTTAGCTGTTACTGATTGGATTCCCCCCCCCGCCCCCCCCCCTCCTTGATTAAGTGTATTGCCAAAGATGAATGTTGGGTTTAGTTTTGTAATTATGACTTGGCCTCTGTATTGTTTATGTATGGTGGAGTCTCCATTGTTTTGGGAAGGTTGGAATAAGTTGATATCATAGCTCTATAATTAGTGGAGTACTTAAGAGAAACATTGGCGTTGCTGATCTTTTGGGTGCAAAGTTGGTACCTGGCTGACACTGCTTTGGATTCTTGTTTATTCGGAGGAATATTAGCTTTAGGGGTTTGACGGTCGGAGATGGGAACGAAAGATTCTTTATAAGGGTGTGGAAACATCTCCTTAATAGACGTGTTTTAAAACCTTGAGAGGAAACTCGAAAGGGAAAACCCAAAGAGAACAATCTTTGCTAGCGGTGGGCTTGAGCTTTTACAAATGGTATCAAAGCCAGGCACCGGGAGGTGTGCCAGCGAGGATGCTAGGATGCTAGGCCCCAAAGGGGGTGGATTGTGAAATCCCACTTCGATTGGAGAGTAAGAGGACAATATGTGCTAGCGATGGGCTTGGGCTGTTACAAATGGTATCAAAGTTAGGCACTGGGTGGTATACCAACGAGGACGCTGGGCTCCCAAGGGAGGTGGATTGTGAGATCCCACATTGGTGGGAGAGGAGAACGAAACATTCCTTATAAGAGTGTGAAAACCTCTCCCTAACGGACGCCGTTTTAAAACCTTGAGGGGAAGTTCGAAAGGGAAAGCCCAAAGAGAACAACATGTACTAGCAGTGGGCTTGGGCTATTACGGTATTAGAGCCAGGCATCGAGCGGTGTGTCAACAAGGATGTTAGGCTCCCAAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGAAACGAAACATTCTTTATAAAGATGTGGAAACCTCTCCTTAATAGACACGTTTCTAAAGCGATGAGCTTGATCGTTACAAAACCTCTCACGAATTAGCGTGGTGGGTCATGAGCATATTTTAAGACGTCAAATTCCACTATACTCAAGGGGGTATGTTCATGTTATAAAATTATACTTTGGATTAACAAAGCTATTAAAGTGAGGCTAATTCATTCAACTTTTGTGGCCAAAGTGGGGCGTTGCATACAAGATCACCAGAAAAGAGGATAGAGAGACTGCACTAAATGTAAGTTCTTCAACTCTTTTCTATCTATAGACGTTATGTTATTTATTAATTTTCATCTTTGATTGATCTGCATTGGGTAGCTCGATCGTTCATCGACCGACATTGTTCATCGATGTAACGACTTTCTTGACGATTTTTCTTCTGTTTTTGTCATGTGTTCCATAGCATTTAGAAGTGAGAGAGAAACAATATGACAAAAAAGAATATGTGGACTTTTTCAATGTAAGTTTCAGTTCATCCAAGGCTGAAGTATCTTAAGCGTTCTTGATATACTTGCTGCTGTTACCTTATTGAAAGCTGCTCAACTTTTTAGGACCCCATGGCTATCACCCCTGTTGTTTCTGGAGTAATGGTGTAAGTAGCAGTATTCAACAATGTATATTTACCCTTGCTTTCTAGAGAATGATATGAGCAGCGAGTTCTATGCCACAGATATATTGCATCTCCAGACAAGAAGCTAAACAAGAATTACCTTGGCCCTGCCTCGCTCGAGGAGATTGCTAAGTATGTGTTCGATTTCGATAATGATATTTACACTTCTTGACGCTTGTTGAGACTTAAAATGATTAGTAGAATTGTTAAGTGTATCACATAGATTACCAACCAGTCTATAATGAAAAACGTGTGAGATCCCACGTTGGTTGGAGAGGGGAATAAAGCATTCCTTATAAGGGTGTGAAAATCTCTCCCTAGTAGACGCGTTTTAAAATTGTGAGGTTGATGATAATATGTAACAGGCCAAAGCGGACAATATTTGCTAGTGGTAGGCTTGGGCTGTTACAAATGGTCTTTGAGCCAGTCACCGTGACACGCTGACCCCCAAGGGAGGTGGATTGTGAGATCCCACATTGGTTGGGTAAGGGAACGAAACATTCCTTATAAGGGTGTGGAAGCCTCTCCCTAGCAGACGCGTTTTAAAACCGTGAGGCTAACGGTGATACGTAATGGGTCAAAGAAGATAATATCTGCTAGCGATGGACTTGGGTTGTTACAAATGGTATCGAAGTCAGTCATTGGGAAGTGTGCCAGCAAGACATTGGGCCTCCAAGGGAAGTGGAATGTGAGATCCCACGTTGGTTGGAGAGGGGAACAAAACATTCCTTACAAGGGTGTGGAAACCTCTCCCTAACAGACGCATTTTAAAACCTTGAGGCTGACGGCGATATGTAATGGGCTAAAGCAAATAATATCCGCTAGCAGTGAGCATGGGCTATTACAAAACCGTAAAACCAACCAACATGAAGAAAACAGAAAACACCCGAACTGAACCGATCAAACTGTCGGGTTTGAGATGATTTGGCTACCTTCTTAAGGTGATTCAGCTTAAGTTCAATTTGACAGCATCAAAACTGCATGAATGTGCAGGCAGATAGTTGATGCGCAAGGGCCCTCAGGACCCAACAAGGACTACCTTTTTCAACTTGAAAAGGCTCTTCTTGAGTTTGGTAAGTTCCTGCTACTCTATAACATGTAGAATTTAGATCCAACTTGGCTTTTTCTCTTGTTTTGTGCTTAAATGTTCTTGCTGTTCAACCATTCTTTGCTCAGGATGGGAAGATAAACATGTCATGGATCTTGCAAATGAAGTCAGAACCCTTCTTTCTGACGGGGAGCACACTGATACTTAGCTTCCAACCTCGACGAAAAGCTTTTCGAGCTCGATGATTTGTCGAGGCTTTCTAAAAGAGATTTGTAAGTCAAAGTCAAAAGTCAAAATCTAGTCTTTCGTCTCGTATTTTATCATTACTTAGATTTATATCGAACACTACCATTAAAAATTTTGACAGCTAAGAGAAAAAAGGTAGGAAACGAGAAATTGAAACGTTTTTACTCTCTCTTCTAGTTGTCGGAAACTTTTTTCTTAATTTACAGAATATTTACATGTTAATCTTTATTGTTTAATTCGTCGAACCATTGGTCTGATTAATGAAATCAACTCGTTTAACATGTTTCTCTTATTGTTTGTCTTGTTTATTGTCGGCCATAAGTATTTATTGGAATCATTCAAAATGCGTGATCGTAAATGACTTTATGGTAATTATACATTGTGTGATCAGACAATTAGCTACCAAGATCATCGAAAGTGGGTGATCCTAAATGACTTCATGGTAATTACATATTTTGTGATCAGACAATTAGTCATCAAGAATTATCTAAAGTGGGTAATCGTAAATGACTTTATGGTAAATTCACGTTGTGTGATTAGGTAATTAGCTACAAGGGTCACTAGAAGAAGATTACGATTCCTACTCTGATTTATGGGTTTAGGTCAGATTAATAAGTCGATTTCACAACGTGTATATATAATTTTTCTTTGGGAAGGGGAGGACGCTAGCCCCCAGAAGGGATGGATTATGATAAGTGTGTGAAAACCTCTTCTCAATAGATGTATTTTAAAACCGTGAACCGTGAGGCTTACGGTGATACCAAACAGACTAAAGCTTGAACTTTTACGAATTATCTTGAACTTTTACGAATTATCATGCCCAAAAGAAATCGAAGAATCAAAGACTTGAACATAATTAAATGAGGAAAAAAAAATTACCAGCATGAACAAAAATCCACCTAGAAATGGATTTATTTCAAATTTGCCAAAATTAGA TATCATCATCTCCCATTTATTAATCGGAAAAAAAAAATCTCCCCTCCACAACCGAGCGGAAATAACAGAGACGCCGTGCTCCGCCCTTACTCCGCCACTTCCGATCAAAAATGGTGATGTGGGTATTCGGGTACGGGTCTCTCATTTGGAAAACTGGCTTCCCCTACGACGAAAAGTTACCCGGCTGTATCAAAGGCTACCGCCGTGTCTTCTATCAAGGGAGTACTGATCATAGAGGCACGCCTGAATATCCTGGAAGAACTGTGACATTGGAGCCTGCAGAAGGGGAAGTTTGTTGGGGCGTTGCATACAAGATCACCAGAAAAGAGGATAGAGAGACTGCACTAAATCATTTAGAAGTGAGAGAGAAACAATATGACAAAAAAGAATATGTGGACTTTTTCAATGACCCCATGGCTATCACCCCTGTTGTTTCTGGAGTAATGGTATATATTGCATCTCCAGACAAGAAGCTAAACAAGAATTACCTTGGCCCTGCCTCGCTCGAGGAGATTGCTAAGCAGATAGTTGATGCGCAAGGGCCCTCAGGACCCAACAAGGACTACCTTTTTCAACTTGAAAAGGCTCTTCTTGAGTTTGGATGGGAAGATAAACATGTCATGGATCTTGCAAATGAAGTCAGAACCCTTCTTTCTGACGGGGAGCACACTGATACTTAGCTTCCAACCTCGACGAAAAGCTTTTCGAGCTCGATGATTTGTCGAGGCTTTCTAAAAGAGATTTGTAAGTCAAAGTCAAAAGTCAAAATCTAGTCTTTCGTCTCGTATTTTATCATTACTTAGATTTATATCGAACACTACCATTAAAAATTTTGACAGCTAAGAGAAAAAAGGTAGGAAACGAGAAATTGAAACGTTTTTACTCTCTCTTCTAGTTGTCGGAAACTTTTTTCTTAATTTACAGAATATTTACATGTTAATCTTTATTGTTTAATTCGTCGAACCATTGGTCTGATTAATGAAATCAACTCGTTTAACATGTTTCTCTTATTGTTTGTCTTGTTTATTGTCGGCCATAAGTATTTATTGGAATCATTCAAAATGCGTGATCGTAAATGACTTTATGGTAATTATACATTGTGTGATCAGACAATTAGCTACCAAGATCATCGAAAGTGGGTGATCCTAAATGACTTCATGGTAATTACATATTTTGTGATCAGACAATTAGTCATCAAGAATTATCTAAAGTGGGTAATCGTAAATGACTTTATGGTAAATTCACGTTGTGTGATTAGGTAATTAGCTACAAGGGTCACTAGAAGAAGATTACGATTCCTACTCTGATTTATGGGTTTAGGTCAGATTAATAAGTCGATTTCACAACGTGTATATATAATTTTTCTTTGGGAAGGGGAGGACGCTAGCCCCCAGAAGGGATGGATTATGATAAGTGTGTGAAAACCTCTTCTCAATAGATGTATTTTAAAACCGTGAACCGTGAGGCTTACGGTGATACCAAACAGACTAAAGCTTGAACTTTTACGAATTATCTTGAACTTTTACGAATTATCATGCCCAAAAGAAATCGAAGAATCAAAGACTTGAACATAATTAAATGAGGAAAAAAAAATTACCAGCATGAACAAAAATCCACCTAGAAATGGATTTATTTCAAATTTGCCAAAATTAGA ATGGTGATGTGGGTATTCGGGTACGGGTCTCTCATTTGGAAAACTGGCTTCCCCTACGACGAAAAGTTACCCGGCTGTATCAAAGGCTACCGCCGTGTCTTCTATCAAGGGAGTACTGATCATAGAGGCACGCCTGAATATCCTGGAAGAACTGTGACATTGGAGCCTGCAGAAGGGGAAGTTTGTTGGGGCGTTGCATACAAGATCACCAGAAAAGAGGATAGAGAGACTGCACTAAATCATTTAGAAGTGAGAGAGAAACAATATGACAAAAAAGAATATGTGGACTTTTTCAATGACCCCATGGCTATCACCCCTGTTGTTTCTGGAGTAATGGTATATATTGCATCTCCAGACAAGAAGCTAAACAAGAATTACCTTGGCCCTGCCTCGCTCGAGGAGATTGCTAAGCAGATAGTTGATGCGCAAGGGCCCTCAGGACCCAACAAGGACTACCTTTTTCAACTTGAAAAGGCTCTTCTTGAGTTTGGATGGGAAGATAAACATGTCATGGATCTTGCAAATGAAGTCAGAACCCTTCTTTCTGACGGGGAGCACACTGATACTTAG MVMWVFGYGSLIWKTGFPYDEKLPGCIKGYRRVFYQGSTDHRGTPEYPGRTVTLEPAEGEVCWGVAYKITRKEDRETALNHLEVREKQYDKKEYVDFFNDPMAITPVVSGVMVYIASPDKKLNKNYLGPASLEEIAKQIVDAQGPSGPNKDYLFQLEKALLEFGWEDKHVMDLANEVRTLLSDGEHTDT
BLAST of Carg24447 vs. NCBI nr
Match: XP_022958293.1 (gamma-glutamylcyclotransferase 2-3 [Cucurbita moschata]) HSP 1 Score: 398.7 bits (1023), Expect = 1.1e-107 Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = 0
BLAST of Carg24447 vs. NCBI nr
Match: XP_023527172.1 (gamma-glutamylcyclotransferase 2-3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 397.5 bits (1020), Expect = 2.5e-107 Identity = 187/189 (98.94%), Postives = 189/189 (100.00%), Query Frame = 0
BLAST of Carg24447 vs. NCBI nr
Match: XP_022991064.1 (gamma-glutamylcyclotransferase 2-3 [Cucurbita maxima]) HSP 1 Score: 392.1 bits (1006), Expect = 1.1e-105 Identity = 185/189 (97.88%), Postives = 187/189 (98.94%), Query Frame = 0
BLAST of Carg24447 vs. NCBI nr
Match: XP_022141370.1 (gamma-glutamylcyclotransferase 2-3 [Momordica charantia] >XP_022141371.1 gamma-glutamylcyclotransferase 2-3 [Momordica charantia]) HSP 1 Score: 364.8 bits (935), Expect = 1.8e-97 Identity = 167/186 (89.78%), Postives = 179/186 (96.24%), Query Frame = 0
BLAST of Carg24447 vs. NCBI nr
Match: XP_008466705.2 (PREDICTED: putative glutathione-specific gamma-glutamylcyclotransferase 2 [Cucumis melo]) HSP 1 Score: 357.1 bits (915), Expect = 3.8e-95 Identity = 163/187 (87.17%), Postives = 179/187 (95.72%), Query Frame = 0
BLAST of Carg24447 vs. TAIR10
Match: AT1G44790.1 (ChaC-like family protein) HSP 1 Score: 298.5 bits (763), Expect = 2.9e-81 Identity = 140/188 (74.47%), Postives = 160/188 (85.11%), Query Frame = 0
BLAST of Carg24447 vs. TAIR10
Match: AT4G31290.1 (ChaC-like family protein) HSP 1 Score: 211.1 bits (536), Expect = 6.1e-55 Identity = 100/184 (54.35%), Postives = 133/184 (72.28%), Query Frame = 0
BLAST of Carg24447 vs. TAIR10
Match: AT5G26220.1 (ChaC-like family protein) HSP 1 Score: 207.6 bits (527), Expect = 6.7e-54 Identity = 98/182 (53.85%), Postives = 131/182 (71.98%), Query Frame = 0
BLAST of Carg24447 vs. Swiss-Prot
Match: sp|Q84QC1|GCT23_ARATH (Gamma-glutamylcyclotransferase 2-3 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;3 PE=1 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 5.2e-80 Identity = 140/188 (74.47%), Postives = 160/188 (85.11%), Query Frame = 0
BLAST of Carg24447 vs. Swiss-Prot
Match: sp|Q84MC1|GCT22_ARATH (Gamma-glutamylcyclotransferase 2-2 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;2 PE=1 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.1e-53 Identity = 100/184 (54.35%), Postives = 133/184 (72.28%), Query Frame = 0
BLAST of Carg24447 vs. Swiss-Prot
Match: sp|Q8GY54|GCT21_ARATH (Gamma-glutamylcyclotransferase 2-1 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;1 PE=1 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.2e-52 Identity = 98/182 (53.85%), Postives = 131/182 (71.98%), Query Frame = 0
BLAST of Carg24447 vs. Swiss-Prot
Match: sp|Q5ZI66|CHAC2_CHICK (Putative glutathione-specific gamma-glutamylcyclotransferase 2 OS=Gallus gallus OX=9031 GN=chac2 PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 2.1e-36 Identity = 88/174 (50.57%), Postives = 112/174 (64.37%), Query Frame = 0
BLAST of Carg24447 vs. Swiss-Prot
Match: sp|Q5PPV4|CHAC2_XENLA (Putative glutathione-specific gamma-glutamylcyclotransferase 2 OS=Xenopus laevis OX=8355 GN=chac2 PE=2 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 7.9e-36 Identity = 91/181 (50.28%), Postives = 113/181 (62.43%), Query Frame = 0
BLAST of Carg24447 vs. TrEMBL
Match: tr|A0A1S3CS18|A0A1S3CS18_CUCME (Gamma-glutamylcyclotransferase OS=Cucumis melo OX=3656 GN=LOC103504050 PE=3 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 2.5e-95 Identity = 163/187 (87.17%), Postives = 179/187 (95.72%), Query Frame = 0
BLAST of Carg24447 vs. TrEMBL
Match: tr|A0A0A0LLS5|A0A0A0LLS5_CUCSA (Gamma-glutamylcyclotransferase OS=Cucumis sativus OX=3659 GN=Csa_2G232470 PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 5.6e-95 Identity = 165/188 (87.77%), Postives = 179/188 (95.21%), Query Frame = 0
BLAST of Carg24447 vs. TrEMBL
Match: tr|A0A2I4ES04|A0A2I4ES04_9ROSI (Gamma-glutamylcyclotransferase OS=Juglans regia OX=51240 GN=LOC108992156 PE=3 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 6.8e-85 Identity = 151/187 (80.75%), Postives = 168/187 (89.84%), Query Frame = 0
BLAST of Carg24447 vs. TrEMBL
Match: tr|A0A061FH77|A0A061FH77_THECC (Gamma-glutamylcyclotransferase OS=Theobroma cacao OX=3641 GN=TCM_035091 PE=3 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.2e-84 Identity = 148/185 (80.00%), Postives = 166/185 (89.73%), Query Frame = 0
BLAST of Carg24447 vs. TrEMBL
Match: tr|A0A1U8PVK6|A0A1U8PVK6_GOSHI (Gamma-glutamylcyclotransferase OS=Gossypium hirsutum OX=3635 GN=LOC107962505 PE=3 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.5e-84 Identity = 147/187 (78.61%), Postives = 167/187 (89.30%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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