CmoCh04G024590 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCAGGCTCGGTCGGTGCAGTGGCCGAGCTCCAACCGAAGAGGGTTCAGTCGGAGGATTACGGTGTTTCTCCGCGATCAGATTTGCGTAAACAGATAGAGAGATGCGAGGAACTGGTGGACCTCTTCTCTGCATAGGCGATCTTCTGTGCGATGTCGGAGAAGAAGAAGCAGGAGAAGGAAAGGGATCTAATGAAACCCCTAAATCAGTAATATCATCAACTTCTTCCTCTGCTTCTGTTTCCACTCTTCCGCTCGTATCAGAAACCCCCGATCTCCCCAAACTCTTTCAGGTTCCCTGCTTATCTTTCGATTTTTGATTTTTCGCTTTCTTTTCTGGTTGTCCTGTAAGTCATTGAGTACTCTGATAATTGATGCTTCGATTACGGTTTCGTACGCTTTGAATGCAGATTATTGTATCGCGAATGTGATTTTTGAGGATTGCGAATATTTTGTAATGAGCTTGATGTTTATTTCATATTCTAATCTTCTTTTGCTTCAGGAAAATTACGACCAATTGAACAAATCATTCGATGATAATGACCACTCTTGGACAGCTTTGACGTTGAAGGTAGGGCGTTTCTTGTGTTTGACAATCAATTTGAATGATTCAGTGATATGAACTTTACTTTCTAACAATTTACAACCTCATTTCCTTTGATTTTGAAATACCGCTTCGTGTTTGTGCAAAGAAATTAGCATTATACTATCCAGCAAATTGGCTTCTATTTCCTTGTGACTTCATTTTTGGGGCATTTTCAGATGTGCAGTGCTCTTGATACTGCTAGTAAACTGGTTGAATCAACCAACTCAAATTCGAGATTTTTGTTGGAGAAGATTGTGGAGCTTGAACAGGTTTTGGAAAAGGGGGATTCTACAAGAGAGGCGGCCATGGCCATCCAAACCAGTTTTAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAGTCAAGGTTAGCATAAGCTTATACATTTAAGGGGTTTCTCATGTTTGTTGATGCATTATGGAAATCTTCTCTTGAGAAATACTCGTTTGAGCAGTTGCCATATTCATTGCTTTGATTCATGCAGTTTGA CCAGGCTCGGTCGGTGCAGTGGCCGAGCTCCAACCGAAGAGGGTTCAGTCGGAGGATTACGGTGTTTCTCCGCGATCAGATTTGCGTAAACAGATAGAGAGATGCGAGGAACTGGTGGACCTCTTCTCTGCATAGGCGATCTTCTGTGCGATGTCGGAGAAGAAGAAGCAGGAGAAGGAAAGGGATCTAATGAAACCCCTAAATCAGTAATATCATCAACTTCTTCCTCTGCTTCTGTTTCCACTCTTCCGCTCGTATCAGAAACCCCCGATCTCCCCAAACTCTTTCAGGAAAATTACGACCAATTGAACAAATCATTCGATGATAATGACCACTCTTGGACAGCTTTGACGTTGAAGATGTGCAGTGCTCTTGATACTGCTAGTAAACTGGTTGAATCAACCAACTCAAATTCGAGATTTTTGTTGGAGAAGATTGTGGAGCTTGAACAGGTTTTGGAAAAGGGGGATTCTACAAGAGAGGCGGCCATGGCCATCCAAACCAGTTTTAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAGTCAAGTTGCCATATTCATTGCTTTGATTCATGCAGTTTGA ATGCGAGGAACTGGTGGACCTCTTCTCTGCATAGGCGATCTTCTGTGCGATGTCGGAGAAGAAGAAGCAGGAGAAGGAAAGGGATCTAATGAAACCCCTAAATCAGTAATATCATCAACTTCTTCCTCTGCTTCTGTTTCCACTCTTCCGCTCGTATCAGAAACCCCCGATCTCCCCAAACTCTTTCAGGAAAATTACGACCAATTGAACAAATCATTCGATGATAATGACCACTCTTGGACAGCTTTGACGTTGAAGATGTGCAGTGCTCTTGATACTGCTAGTAAACTGGTTGAATCAACCAACTCAAATTCGAGATTTTTGTTGGAGAAGATTGTGGAGCTTGAACAGGTTTTGGAAAAGGGGGATTCTACAAGAGAGGCGGCCATGGCCATCCAAACCAGTTTTAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAGTCAAGTTGCCATATTCATTGCTTTGATTCATGCAGTTTGA
BLAST of CmoCh04G024590 vs. TrEMBL
Match: A0A0A0K969_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G040570 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 1.7e-59 Identity = 126/151 (83.44%), Postives = 138/151 (91.39%), Query Frame = 1
BLAST of CmoCh04G024590 vs. TrEMBL
Match: A0A067GLZ3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031692mg PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.3e-27 Identity = 76/148 (51.35%), Postives = 96/148 (64.86%), Query Frame = 1
BLAST of CmoCh04G024590 vs. TrEMBL
Match: G7K8T8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_5g058660 PE=4 SV=2) HSP 1 Score: 129.8 bits (325), Expect = 3.0e-27 Identity = 79/147 (53.74%), Postives = 99/147 (67.35%), Query Frame = 1
BLAST of CmoCh04G024590 vs. TrEMBL
Match: E0CR94_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g03330 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.9e-27 Identity = 74/139 (53.24%), Postives = 93/139 (66.91%), Query Frame = 1
BLAST of CmoCh04G024590 vs. TrEMBL
Match: V4T2M5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002759mg PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.9e-27 Identity = 76/148 (51.35%), Postives = 96/148 (64.86%), Query Frame = 1
BLAST of CmoCh04G024590 vs. TAIR10
Match: AT4G08240.2 (AT4G08240.2 unknown protein) HSP 1 Score: 119.4 bits (298), Expect = 2.0e-27 Identity = 65/139 (46.76%), Postives = 93/139 (66.91%), Query Frame = 1
BLAST of CmoCh04G024590 vs. NCBI nr
Match: gi|659089752|ref|XP_008445673.1| (PREDICTED: uncharacterized protein LOC103488633 isoform X2 [Cucumis melo]) HSP 1 Score: 240.4 bits (612), Expect = 2.3e-60 Identity = 128/152 (84.21%), Postives = 140/152 (92.11%), Query Frame = 1
BLAST of CmoCh04G024590 vs. NCBI nr
Match: gi|659089759|ref|XP_008445677.1| (PREDICTED: uncharacterized protein LOC103488633 isoform X5 [Cucumis melo]) HSP 1 Score: 240.4 bits (612), Expect = 2.3e-60 Identity = 128/152 (84.21%), Postives = 140/152 (92.11%), Query Frame = 1
BLAST of CmoCh04G024590 vs. NCBI nr
Match: gi|659089750|ref|XP_008445672.1| (PREDICTED: uncharacterized protein LOC103488633 isoform X1 [Cucumis melo]) HSP 1 Score: 239.2 bits (609), Expect = 5.0e-60 Identity = 127/151 (84.11%), Postives = 139/151 (92.05%), Query Frame = 1
BLAST of CmoCh04G024590 vs. NCBI nr
Match: gi|659089754|ref|XP_008445675.1| (PREDICTED: uncharacterized protein LOC103488633 isoform X3 [Cucumis melo]) HSP 1 Score: 239.2 bits (609), Expect = 5.0e-60 Identity = 127/151 (84.11%), Postives = 139/151 (92.05%), Query Frame = 1
BLAST of CmoCh04G024590 vs. NCBI nr
Match: gi|659089757|ref|XP_008445676.1| (PREDICTED: uncharacterized protein LOC103488633 isoform X4 [Cucumis melo]) HSP 1 Score: 239.2 bits (609), Expect = 5.0e-60 Identity = 127/151 (84.11%), Postives = 139/151 (92.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |