CmoCh04G021950 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G021950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	EF hand calcium-binding family protein
Location	Cmo_Chr04 : 16276001 .. 16276423 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCAATTCTCGCGCTACCAGAGAGTGTTCAACAGTATAGACTCCGACGGCGACGGCAAGGTCTCCTCTCAAGATTTGCTTACCCGGTTCGCGGCGGTGACAGGGGAGGAGCTCACGGAGGAGGAGGCGGCAGCGGTGGTGGCGGCCTACGATTCCGACGACGACGGGCTATTGGAGATTGCGGAGTTTGAGAGGTTGGTGGAGGATGGGGATGGAGAGGGGAAGGAGATAAAGGAGGCTTTCAAGATGTATGAAATGGAGGGATTGGGTGTGATTACGGCGGTGAGCCTGCGGCGGATGCTGAGCCAGCTGGGGCAATCGAGGAGCATCGGGGATTGCAACAGAATGATCGCTAAGTTTGATGTCAATGGCGATGGAGTTCTCTGTTTTGATGAGTTCAGGATTATGATGTTGCTCTGA

mRNA sequence

ATGCCCCAATTCTCGCGCTACCAGAGAGTGTTCAACAGTATAGACTCCGACGGCGACGGCAAGGTCTCCTCTCAAGATTTGCTTACCCGGTTCGCGGCGGTGACAGGGGAGGAGCTCACGGAGGAGGAGGCGGCAGCGGTGGTGGCGGCCTACGATTCCGACGACGACGGGCTATTGGAGATTGCGGAGTTTGAGAGGTTGGTGGAGGATGGGGATGGAGAGGGGAAGGAGATAAAGGAGGCTTTCAAGATGTATGAAATGGAGGGATTGGGTGTGATTACGGCGGTGAGCCTGCGGCGGATGCTGAGCCAGCTGGGGCAATCGAGGAGCATCGGGGATTGCAACAGAATGATCGCTAAGTTTGATGTCAATGGCGATGGAGTTCTCTGTTTTGATGAGTTCAGGATTATGATGTTGCTCTGA

Coding sequence (CDS)

ATGCCCCAATTCTCGCGCTACCAGAGAGTGTTCAACAGTATAGACTCCGACGGCGACGGCAAGGTCTCCTCTCAAGATTTGCTTACCCGGTTCGCGGCGGTGACAGGGGAGGAGCTCACGGAGGAGGAGGCGGCAGCGGTGGTGGCGGCCTACGATTCCGACGACGACGGGCTATTGGAGATTGCGGAGTTTGAGAGGTTGGTGGAGGATGGGGATGGAGAGGGGAAGGAGATAAAGGAGGCTTTCAAGATGTATGAAATGGAGGGATTGGGTGTGATTACGGCGGTGAGCCTGCGGCGGATGCTGAGCCAGCTGGGGCAATCGAGGAGCATCGGGGATTGCAACAGAATGATCGCTAAGTTTGATGTCAATGGCGATGGAGTTCTCTGTTTTGATGAGTTCAGGATTATGATGTTGCTCTGA

Homology

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BLAST of CmoCh04G021950 vs. Swiss-Prot
Match: CML31_ORYSJ (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica GN=CML31 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-29
Identity = 70/135 (51.85%), Postives = 91/135 (67.41%), Query Frame = 1


Query: 10  VFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLEIAEFERLV- 69
           +F + D DGDG++S+ +L        GEE+++EEA  +VA+ D+D DGLL  AEF RLV 
Sbjct: 15  LFATFDHDGDGRISAAELRLCMKTTLGEEVSDEEAGQLVASVDADGDGLLCEAEFVRLVQ 74

Query: 70  -----EDGDGEGKEIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMIAKFDV 129
                E+ +  G  ++EAF MYEMEG G IT  SLRRML +LG  + I DC  MI +FD+
Sbjct: 75  AAEVEEEDERRGTGLREAFGMYEMEGEGCITPTSLRRMLRRLGSDQDIDDCRAMICRFDL 134

Query: 130 NGDGVLCFDEFRIMM 139
           NGDGVL FDEF+IMM
Sbjct: 135 NGDGVLSFDEFKIMM 149

[Close]

BLAST of CmoCh04G021950 vs. Swiss-Prot
Match: CML23_ORYSJ (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica GN=CML23 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-28
Identity = 68/144 (47.22%), Postives = 94/144 (65.28%), Query Frame = 1


Query: 7   YQRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLEIAEFER 66
           ++RVF S D DGDGK+S+ +L     A  GE++ +EE  A++A  D+D DGLL+  EF R
Sbjct: 7   FRRVFGSFDQDGDGKISATELRLCVKASLGEDMPDEEVQALMALADTDGDGLLDEEEFVR 66

Query: 67  LVEDGDGEGKE-----------IKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCN 126
           LV + + +G E           ++EAF MYEMEG G IT +SL+ MLS+LG    + +C 
Sbjct: 67  LVTEMEADGDEEEDDDDETCRCLREAFAMYEMEGRGCITPLSLKLMLSKLGTHLDVAECQ 126

Query: 127 RMIAKFDVNGDGVLCFDEFRIMML 140
            MI +FD+NGDGVL FDEF+ MM+
Sbjct: 127 AMICRFDMNGDGVLTFDEFKTMMM 150

[Close]

BLAST of CmoCh04G021950 vs. Swiss-Prot
Match: CML19_ORYSJ (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica GN=CML19 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.0e-28
Identity = 68/139 (48.92%), Postives = 99/139 (71.22%), Query Frame = 1


Query: 5   SRYQRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLEIAEF 64
           + ++RVF++ D D DGK+S+ +L     A  GE+++ EEA A+V++ D+DDDGLL+  EF
Sbjct: 6   AEFRRVFSAFDRDADGKISAAELRLCMKAALGEDMSAEEAEALVSSADTDDDGLLDEEEF 65

Query: 65  ERL---VEDGDGEGK--EIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMIA 124
            +L   +E GD E +   + EAF+MYEMEG G IT  SL+RMLS+LG  + I +C  MI 
Sbjct: 66  TKLAVQLEMGDEEERCRGLMEAFRMYEMEGEGRITPASLKRMLSKLGSHQGIEECQTMIC 125

Query: 125 KFDVNGDGVLCFDEFRIMM 139
           +FD++GDGV+ F+EF+IMM
Sbjct: 126 RFDLDGDGVISFEEFKIMM 144

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BLAST of CmoCh04G021950 vs. Swiss-Prot
Match: CML25_ORYSJ (Probable calcium-binding protein CML25/26 OS=Oryza sativa subsp. japonica GN=CML25 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-25
Identity = 72/141 (51.06%), Postives = 92/141 (65.25%), Query Frame = 1


Query: 10  VFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLEIAEFER--- 69
           VF + D DGDGKVS+ +L    AA  GEE++EEEAAA++A  D+D DGLL+  EF R   
Sbjct: 8   VFAAFDKDGDGKVSASELRGCMAAALGEEVSEEEAAAILATADTDGDGLLDHHEFMRLSA 67

Query: 70  ---LVEDGDGEGKEIKEAFKMY-EMEGLGVITAVSLRRMLSQLG---QSRSIGDCNRMIA 129
              L E  +   + ++EAF MY E E   VIT  SLRRML +LG   Q   + +C  MI 
Sbjct: 68  AHQLQEPAEESLRCLREAFDMYAEEEETAVITPASLRRMLRRLGSEHQRLEMEECRAMIC 127

Query: 130 KFDVNGDGVLCFDEFRIMMLL 141
           +FD+NGDGVL FDEFR+MML+
Sbjct: 128 RFDLNGDGVLSFDEFRVMMLM 148

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BLAST of CmoCh04G021950 vs. Swiss-Prot
Match: CML38_ARATH (Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-23
Identity = 61/133 (45.86%), Postives = 90/133 (67.67%), Query Frame = 1


Query: 8   QRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLEIAEFERL 67
           + VF+ +D++ DG++S ++L   F  + GE+L++EEA A V   D+D DG+L+  EF +L
Sbjct: 45  EAVFSYMDANRDGRISPEELQKSFMTL-GEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQL 104

Query: 68  VEDGDGEGK--EIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMIAKFDVNG 127
           ++  D E K  E+K AF++Y  EG   IT  SL+ ML +LG+SR+  DC  MI+ FD+N 
Sbjct: 105 IKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164

Query: 128 DGVLCFDEFRIMM 139
           DGVL FDEF +MM
Sbjct: 165 DGVLSFDEFALMM 176

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BLAST of CmoCh04G021950 vs. TrEMBL
Match: A0A0A0KPM3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571560 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-42
Identity = 97/145 (66.90%), Postives = 116/145 (80.00%), Query Frame = 1


Query: 1   MPQFSRYQRV-FNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLL 60
           M + S Y  + F +ID+D DGKVS  DLLTR  A+TG+ LTE EAA+ VAA+DSD DGLL
Sbjct: 1   MDKLSPYHTLLFYNIDTDSDGKVSPHDLLTRLPALTGQVLTEAEAASAVAAFDSDGDGLL 60

Query: 61  EIAEFERLVED----GDGEGKEIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCN 120
            + EF RLVE     GD + +E++EAF+MYEMEGLGVIT VSLRRMLS+LG+SRS+GDC 
Sbjct: 61  GMEEFGRLVEGVVVGGDDDDREVREAFQMYEMEGLGVITPVSLRRMLSRLGESRSVGDCK 120

Query: 121 RMIAKFDVNGDGVLCFDEFRIMMLL 141
           RMIAKFD++GDGVLCFDEFR MMLL
Sbjct: 121 RMIAKFDLDGDGVLCFDEFRGMMLL 145

[Close]

BLAST of CmoCh04G021950 vs. TrEMBL
Match: A0A0A0L8P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G588520 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.0e-32
Identity = 77/134 (57.46%), Postives = 99/134 (73.88%), Query Frame = 1


Query: 7   YQRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLEIAEFER 66
           Y+RVF   DSDGDGK+S  +L    A V+GE+L+  EA   VA +DSD DG L+  +F R
Sbjct: 7   YKRVFEHFDSDGDGKISPSELRECIAVVSGEKLSVLEAQEAVAEFDSDGDGQLKEEDFVR 66

Query: 67  LVEDGDGEG--KEIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMIAKFDVN 126
            V+ G  E   KE++EAFKMYEM+G G+ITA SLRRML +LG+++S+ DC  MIAKFD++
Sbjct: 67  FVDGGGEEERVKELREAFKMYEMKGSGLITAESLRRMLRKLGETKSLRDCTAMIAKFDID 126

Query: 127 GDGVLCFDEFRIMM 139
           GDGVL FDEFR+MM
Sbjct: 127 GDGVLSFDEFRVMM 140

[Close]

BLAST of CmoCh04G021950 vs. TrEMBL
Match: A0A0R0EWC3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G088200 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.0e-31
Identity = 79/141 (56.03%), Postives = 104/141 (73.76%), Query Frame = 1


Query: 1   MPQFSRYQRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLE 60
           M + S+Y+R+FN  D +GDGK+S+ +L     A+ GE L+E++A A VA  DSD DGL+ 
Sbjct: 1   MDKLSQYERLFNQFDENGDGKISASELWQCVEAMGGE-LSEKDAEAAVALMDSDGDGLVG 60

Query: 61  IAEFERLVEDGDGEGKE--IKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMI 120
             +F R VE G  E KE  +KEAFKMYEM+G G IT  SL+RMLS+LG+SRSI +C  MI
Sbjct: 61  FDDFLRFVEGGKEEEKEDGLKEAFKMYEMDGSGCITPRSLKRMLSRLGESRSIDECKVMI 120

Query: 121 AKFDVNGDGVLCFDEFRIMML 140
           A+FD++GDGVL FDEF++MML
Sbjct: 121 ARFDLDGDGVLTFDEFKVMML 140

[Close]

BLAST of CmoCh04G021950 vs. TrEMBL
Match: A0A0S3T8H0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G080300 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-31
Identity = 77/141 (54.61%), Postives = 104/141 (73.76%), Query Frame = 1


Query: 1   MPQFSRYQRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLE 60
           M + S+Y RVFN  D +GDG++S+ +L     A+ G+ ++  EA A+V   DSD+DGL+ 
Sbjct: 2   MEKVSQYVRVFNHFDENGDGRISASELRQCVEAIGGK-VSWAEAEALVEVLDSDNDGLVG 61

Query: 61  IAEFERLVEDGDGEGK--EIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMI 120
           + +F R VE+G+ E K  E+KEAFKMYEMEG G ITA SL+RML +LG+ +SI +C  MI
Sbjct: 62  LDDFVRFVEEGEEEEKVKELKEAFKMYEMEGCGCITAKSLKRMLGRLGECKSIDECETMI 121

Query: 121 AKFDVNGDGVLCFDEFRIMML 140
           A+FD+NGDGVL FDEFR+MML
Sbjct: 122 ARFDLNGDGVLSFDEFRVMML 141

[Close]

BLAST of CmoCh04G021950 vs. TrEMBL
Match: A0A0L9VMF1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g213800 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-31
Identity = 77/141 (54.61%), Postives = 104/141 (73.76%), Query Frame = 1


Query: 1   MPQFSRYQRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLE 60
           M + S+Y RVFN  D +GDG++S+ +L     A+ G+ ++  EA A+V   DSD+DGL+ 
Sbjct: 2   MEKVSQYVRVFNHFDENGDGRISASELRQCVEAIGGK-VSWAEAEALVEVLDSDNDGLVG 61

Query: 61  IAEFERLVEDGDGEGK--EIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMI 120
           + +F R VE+G+ E K  E+KEAFKMYEMEG G ITA SL+RML +LG+ +SI +C  MI
Sbjct: 62  LDDFVRFVEEGEEEEKVKELKEAFKMYEMEGCGCITAKSLKRMLGRLGECKSIDECETMI 121

Query: 121 AKFDVNGDGVLCFDEFRIMML 140
           A+FD+NGDGVL FDEFR+MML
Sbjct: 122 ARFDLNGDGVLSFDEFRVMML 141

[Close]

BLAST of CmoCh04G021950 vs. TAIR10
Match: AT1G76650.1 (AT1G76650.1 calmodulin-like 38)

HSP 1 Score: 110.5 bits (275), Expect = 8.2e-25
Identity = 61/133 (45.86%), Postives = 90/133 (67.67%), Query Frame = 1


Query: 8   QRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLEIAEFERL 67
           + VF+ +D++ DG++S ++L   F  + GE+L++EEA A V   D+D DG+L+  EF +L
Sbjct: 45  EAVFSYMDANRDGRISPEELQKSFMTL-GEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQL 104

Query: 68  VEDGDGEGK--EIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMIAKFDVNG 127
           ++  D E K  E+K AF++Y  EG   IT  SL+ ML +LG+SR+  DC  MI+ FD+N 
Sbjct: 105 IKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164

Query: 128 DGVLCFDEFRIMM 139
           DGVL FDEF +MM
Sbjct: 165 DGVLSFDEFALMM 176

[Close]

BLAST of CmoCh04G021950 vs. TAIR10
Match: AT1G76640.1 (AT1G76640.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-22
Identity = 59/136 (43.38%), Postives = 88/136 (64.71%), Query Frame = 1


Query: 8   QRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLEIAEFERL 67
           + VF  +D++ DG++S+++L   F  + GE++++EEA A V   D D DG+L+I EF  L
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTL-GEQMSDEEAEAAVKLSDIDGDGMLDINEFALL 83

Query: 68  VEDGDG-----EGKEIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMIAKFD 127
           ++  D      + ++I EAF+MY  +G   IT  SL+ ML +LG+SR+  DC  MI  FD
Sbjct: 84  IKGNDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFD 143

Query: 128 VNGDGVLCFDEFRIMM 139
           +N DGVL FDEF +MM
Sbjct: 144 LNADGVLSFDEFALMM 158

[Close]

BLAST of CmoCh04G021950 vs. TAIR10
Match: AT5G42380.1 (AT5G42380.1 calmodulin like 37)

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-22
Identity = 62/133 (46.62%), Postives = 83/133 (62.41%), Query Frame = 1


Query: 10  VFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLEIAEFERLVE 69
           VF+ +D++ DGK+S ++L +   ++ G  L+  E   VV   D D DG ++  EF +L+E
Sbjct: 53  VFDYMDANSDGKISGEELQS-CVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLME 112

Query: 70  DGDGEG----KEIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMIAKFDVNG 129
             DG      KE+KEAF MY MEG   ITA SLRR LS+LG+S ++  C  MI  FD N 
Sbjct: 113 GEDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQND 172

Query: 130 DGVLCFDEFRIMM 139
           DGVL FDEF +MM
Sbjct: 173 DGVLSFDEFVLMM 184

[Close]

BLAST of CmoCh04G021950 vs. TAIR10
Match: AT3G50770.1 (AT3G50770.1 calmodulin-like 41)

HSP 1 Score: 95.9 bits (237), Expect = 2.1e-20
Identity = 61/140 (43.57%), Postives = 90/140 (64.29%), Query Frame = 1


Query: 8   QRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLEIAEFERL 67
           ++VF+  DSDGDGK+S+ +L   F +V GE ++ E A   +   D+D DG L   +F  L
Sbjct: 66  RQVFSHFDSDGDGKISAFELRHYFGSV-GEYISHEAAQEAINEVDTDADGSLGFEDFVGL 125

Query: 68  VE------DG--DGEGKEIKEAFKMYEME-GLGVITAVSLRRMLSQLGQSRSIGDCNRMI 127
           +       DG  DG+G E+K AF+M+E+E G G IT   L++ML +LG+SR+ G+C  MI
Sbjct: 126 MTRRDLYGDGEVDGDG-ELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMI 185

Query: 128 AKFDVNGDGVLCFDEFRIMM 139
             +D++G+G+L F EFR MM
Sbjct: 186 KFYDIDGNGILDFHEFRQMM 203

[Close]

BLAST of CmoCh04G021950 vs. TAIR10
Match: AT3G01830.1 (AT3G01830.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 94.7 bits (234), Expect = 4.7e-20
Identity = 61/137 (44.53%), Postives = 85/137 (62.04%), Query Frame = 1


Query: 7   YQRVFNSIDSDGDGKVSSQDLLTRFAAVTGEE--LTEEEAAAVVAAYDSDDDGLLEIAEF 66
           YQRVF+  D    GKVS   +     A+   +  + ++E        +S DD  LE+ +F
Sbjct: 12  YQRVFSCFDKSHQGKVSVSTIERCVDAIKSGKRAVVDQEDTTNPNPEESTDDKSLELEDF 71

Query: 67  ERLVEDGDGEGKE--IKEAFKMYE-MEGLGVITAVSLRRMLSQLGQSRSIGDCNRMIAKF 126
            +LVE+G+   KE  +KEAFK+YE  EG   IT  SL+RMLS LG+S+S+ DC  MI++F
Sbjct: 72  VKLVEEGEEADKEKDLKEAFKLYEESEG---ITPKSLKRMLSLLGESKSLKDCEVMISQF 131

Query: 127 DVNGDGVLCFDEFRIMM 139
           D+N DG++ FDEFR MM
Sbjct: 132 DINRDGIINFDEFRAMM 145

[Close]

BLAST of CmoCh04G021950 vs. NCBI nr
Match: gi|449465527|ref|XP_004150479.1| (PREDICTED: probable calcium-binding protein CML31 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 5.4e-42
Identity = 97/145 (66.90%), Postives = 116/145 (80.00%), Query Frame = 1


Query: 1   MPQFSRYQRV-FNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLL 60
           M + S Y  + F +ID+D DGKVS  DLLTR  A+TG+ LTE EAA+ VAA+DSD DGLL
Sbjct: 1   MDKLSPYHTLLFYNIDTDSDGKVSPHDLLTRLPALTGQVLTEAEAASAVAAFDSDGDGLL 60

Query: 61  EIAEFERLVED----GDGEGKEIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCN 120
            + EF RLVE     GD + +E++EAF+MYEMEGLGVIT VSLRRMLS+LG+SRS+GDC 
Sbjct: 61  GMEEFGRLVEGVVVGGDDDDREVREAFQMYEMEGLGVITPVSLRRMLSRLGESRSVGDCK 120

Query: 121 RMIAKFDVNGDGVLCFDEFRIMMLL 141
           RMIAKFD++GDGVLCFDEFR MMLL
Sbjct: 121 RMIAKFDLDGDGVLCFDEFRGMMLL 145

[Close]

BLAST of CmoCh04G021950 vs. NCBI nr
Match: gi|659074611|ref|XP_008437697.1| (PREDICTED: probable calcium-binding protein CML31 [Cucumis melo])

HSP 1 Score: 178.3 bits (451), Expect = 9.1e-42
Identity = 96/144 (66.67%), Postives = 115/144 (79.86%), Query Frame = 1


Query: 1   MPQFSRYQRV-FNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLL 60
           M + S Y  + F +ID+D DGKVS  DL TR  A+TG +LTE EAA+ VAAYDSD DGLL
Sbjct: 1   MDKLSPYHTLLFYTIDTDSDGKVSPHDLFTRLPALTGLDLTEAEAASAVAAYDSDGDGLL 60

Query: 61  EIAEFERLV---EDGDGEGKEIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNR 120
            + EF RLV   +D D + +E++EAF+MYEMEGLGVIT VSLRRMLS+LG+SRS+GDC R
Sbjct: 61  GMEEFGRLVKGVDDNDDDDREVREAFQMYEMEGLGVITPVSLRRMLSRLGESRSVGDCKR 120

Query: 121 MIAKFDVNGDGVLCFDEFRIMMLL 141
           MIAKFD++GDGVLCFDEFR MMLL
Sbjct: 121 MIAKFDLDGDGVLCFDEFRGMMLL 144

[Close]

BLAST of CmoCh04G021950 vs. NCBI nr
Match: gi|659098329|ref|XP_008450085.1| (PREDICTED: putative calcium-binding protein CML19 [Cucumis melo])

HSP 1 Score: 146.7 bits (369), Expect = 2.9e-32
Identity = 79/134 (58.96%), Postives = 99/134 (73.88%), Query Frame = 1


Query: 7   YQRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLEIAEFER 66
           Y+RVF   DSDGDGK+S  +L    A V+GE+L+  EA   VA +DSD DG LE  +F R
Sbjct: 7   YKRVFEHFDSDGDGKISPSELRECIAVVSGEKLSVVEAQEAVAEFDSDGDGQLEEEDFMR 66

Query: 67  LVEDGDGEGK--EIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMIAKFDVN 126
            V+ G  E K  E++EAFKMYEMEG G+ITA SLRRML ++G++RS+ DC  MIAKFDV+
Sbjct: 67  FVDGGGKEEKVKELREAFKMYEMEGSGLITAESLRRMLRKMGETRSLRDCMAMIAKFDVD 126

Query: 127 GDGVLCFDEFRIMM 139
           GDGVL FDEF++MM
Sbjct: 127 GDGVLNFDEFKVMM 140

[Close]

BLAST of CmoCh04G021950 vs. NCBI nr
Match: gi|1021528673|ref|XP_016207777.1| (PREDICTED: calcium-binding protein CML39 [Arachis ipaensis])

HSP 1 Score: 145.6 bits (366), Expect = 6.6e-32
Identity = 80/141 (56.74%), Postives = 102/141 (72.34%), Query Frame = 1


Query: 1   MPQFSRYQRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLE 60
           M + S+Y+RVFN  D +GDGK+S+ +L     AV GE L+ EEA   V   D D DGLL 
Sbjct: 3   MDKLSQYERVFNHFDENGDGKISASELKQCVEAVGGE-LSTEEAEVAVTLLDLDGDGLLG 62

Query: 61  IAEFERLVEDGDGEGK--EIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMI 120
           + +F R VE G+ E K  +++EAFKMYEM+G G IT  SL+RMLS+LG+SRSI DC  MI
Sbjct: 63  LDDFVRFVEGGEEEEKVNDLREAFKMYEMDGSGCITPKSLKRMLSRLGESRSIDDCKFMI 122

Query: 121 AKFDVNGDGVLCFDEFRIMML 140
           ++FD+NGDGVL FDEFR+MML
Sbjct: 123 SRFDLNGDGVLNFDEFRVMML 142

[Close]

BLAST of CmoCh04G021950 vs. NCBI nr
Match: gi|449455952|ref|XP_004145714.1| (PREDICTED: putative calcium-binding protein CML19 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 8.6e-32
Identity = 77/134 (57.46%), Postives = 99/134 (73.88%), Query Frame = 1


Query: 7   YQRVFNSIDSDGDGKVSSQDLLTRFAAVTGEELTEEEAAAVVAAYDSDDDGLLEIAEFER 66
           Y+RVF   DSDGDGK+S  +L    A V+GE+L+  EA   VA +DSD DG L+  +F R
Sbjct: 7   YKRVFEHFDSDGDGKISPSELRECIAVVSGEKLSVLEAQEAVAEFDSDGDGQLKEEDFVR 66

Query: 67  LVEDGDGEG--KEIKEAFKMYEMEGLGVITAVSLRRMLSQLGQSRSIGDCNRMIAKFDVN 126
            V+ G  E   KE++EAFKMYEM+G G+ITA SLRRML +LG+++S+ DC  MIAKFD++
Sbjct: 67  FVDGGGEEERVKELREAFKMYEMKGSGLITAESLRRMLRKLGETKSLRDCTAMIAKFDID 126

Query: 127 GDGVLCFDEFRIMM 139
           GDGVL FDEFR+MM
Sbjct: 127 GDGVLSFDEFRVMM 140

The following BLAST results are available for this feature:

BLAST of CmoCh04G021950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CML31_ORYSJ	5.2e-29	51.85	Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica GN=CML31 ...	[more]
CML23_ORYSJ	1.2e-28	47.22	Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica GN=CML23 ...	[more]
CML19_ORYSJ	2.0e-28	48.92	Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica GN=CML19 ...	[more]
CML25_ORYSJ	1.6e-25	51.06	Probable calcium-binding protein CML25/26 OS=Oryza sativa subsp. japonica GN=CML...	[more]
CML38_ARATH	1.5e-23	45.86	Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1	[more]

BLAST of CmoCh04G021950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPM3_CUCSA	3.7e-42	66.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571560 PE=4 SV=1	[more]
A0A0A0L8P1_CUCSA	6.0e-32	57.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G588520 PE=4 SV=1	[more]
A0A0R0EWC3_SOYBN	1.0e-31	56.03	Uncharacterized protein OS=Glycine max GN=GLYMA_19G088200 PE=4 SV=1	[more]
A0A0S3T8H0_PHAAN	1.7e-31	54.61	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G080300 PE=...	[more]
A0A0L9VMF1_PHAAN	1.7e-31	54.61	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g213800 PE=4 SV=1	[more]

BLAST of CmoCh04G021950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76650.1	8.2e-25	45.86	calmodulin-like 38	[more]
AT1G76640.1	1.3e-22	43.38	Calcium-binding EF-hand family protein	[more]
AT5G42380.1	1.7e-22	46.62	calmodulin like 37	[more]
AT3G50770.1	2.1e-20	43.57	calmodulin-like 41	[more]
AT3G01830.1	4.7e-20	44.53	Calcium-binding EF-hand family protein	[more]

BLAST of CmoCh04G021950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465527\|ref\|XP_004150479.1\|	5.4e-42	66.90	PREDICTED: probable calcium-binding protein CML31 [Cucumis sativus]	[more]
gi\|659074611\|ref\|XP_008437697.1\|	9.1e-42	66.67	PREDICTED: probable calcium-binding protein CML31 [Cucumis melo]	[more]
gi\|659098329\|ref\|XP_008450085.1\|	2.9e-32	58.96	PREDICTED: putative calcium-binding protein CML19 [Cucumis melo]	[more]
gi\|1021528673\|ref\|XP_016207777.1\|	6.6e-32	56.74	PREDICTED: calcium-binding protein CML39 [Arachis ipaensis]	[more]
gi\|449455952\|ref\|XP_004145714.1\|	8.6e-32	57.46	PREDICTED: putative calcium-binding protein CML19 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0071229	cellular response to acid chemical
biological_process	GO:0071310	cellular response to organic substance
biological_process	GO:1901701	cellular response to oxygen-containing compound
biological_process	GO:0098542	defense response to other organism
biological_process	GO:0045087	innate immune response
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0031347	regulation of defense response
biological_process	GO:0007165	signal transduction
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0030001	metal ion transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021950.1	CmoCh04G021950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF00036	EF-hand_1	coord: 114..138 score: 7.
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 5..68 score: 4.3
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 43..71 score: 68.0coord: 6..34 score: 0.13coord: 113..140 score: 0.4coord: 77..105 score:
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 2..37 score: 10.385coord: 39..74 score: 9.994coord: 109..140 score: 10.748coord: 76..108 score: 7
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 3..139 score: 4.7
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 3..139 score: 1.74
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 52..64 score: -coord: 122..134 score: -coord: 15..27 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 6..138 score: 1.4
None	No IPR available	PANTHER	PTHR10891:SF622	CALCIUM-BINDING PROTEIN CML37-RELATED	coord: 6..138 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G021950	Cucsa.280520	Cucumber (Gy14) v1	cgycmoB0777
CmoCh04G021950	CmaCh04G020930	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G021950	Csa5G571560	Cucumber (Chinese Long) v2	cmocuB742
CmoCh04G021950	MELO3C005319	Melon (DHL92) v3.5.1	cmomeB627
CmoCh04G021950	CSPI05G19750	Wild cucumber (PI 183967)	cmocpiB750
CmoCh04G021950	Lsi09G006460	Bottle gourd (USVL1VR-Ls)	cmolsiB610
CmoCh04G021950	Cp4.1LG00g02950	Cucurbita pepo (Zucchini)	cmocpeB645
CmoCh04G021950	MELO3C005319.2	Melon (DHL92) v3.6.1	cmomedB716
CmoCh04G021950	CsaV3_5G028160	Cucumber (Chinese Long) v3	cmocucB0855
CmoCh04G021950	CsaV3_5G028580	Cucumber (Chinese Long) v3	cmocucB0878
CmoCh04G021950	Bhi12G000763	Wax gourd	cmowgoB0824
CmoCh04G021950	CsGy5G018760	Cucumber (Gy14) v2	cgybcmoB633
CmoCh04G021950	CsGy5G019250	Cucumber (Gy14) v2	cgybcmoB655
CmoCh04G021950	Carg26040	Silver-seed gourd	carcmoB0580

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G021950	Cucumber (Gy14) v2	cgybcmoB637
CmoCh04G021950	Melon (DHL92) v3.6.1	cmomedB744
CmoCh04G021950	Silver-seed gourd	carcmoB0271
CmoCh04G021950	Silver-seed gourd	carcmoB1137
CmoCh04G021950	Silver-seed gourd	carcmoB1413
CmoCh04G021950	Cucumber (Chinese Long) v3	cmocucB0858
CmoCh04G021950	Watermelon (97103) v2	cmowmbB676
CmoCh04G021950	Watermelon (97103) v2	cmowmbB740
CmoCh04G021950	Wax gourd	cmowgoB0909
CmoCh04G021950	Cucurbita moschata (Rifu)	cmocmoB344
CmoCh04G021950	Cucurbita moschata (Rifu)	cmocmoB254
CmoCh04G021950	Cucurbita moschata (Rifu)	cmocmoB469
CmoCh04G021950	Cucumber (Gy14) v1	cgycmoB0800
CmoCh04G021950	Cucurbita maxima (Rimu)	cmacmoB301
CmoCh04G021950	Cucurbita maxima (Rimu)	cmacmoB426
CmoCh04G021950	Cucurbita maxima (Rimu)	cmacmoB742
CmoCh04G021950	Wild cucumber (PI 183967)	cmocpiB733
CmoCh04G021950	Cucumber (Chinese Long) v2	cmocuB724
CmoCh04G021950	Melon (DHL92) v3.5.1	cmomeB654
CmoCh04G021950	Watermelon (Charleston Gray)	cmowcgB636
CmoCh04G021950	Watermelon (Charleston Gray)	cmowcgB666
CmoCh04G021950	Watermelon (97103) v1	cmowmB705
CmoCh04G021950	Watermelon (97103) v1	cmowmB706
CmoCh04G021950	Cucurbita pepo (Zucchini)	cmocpeB650
CmoCh04G021950	Cucurbita pepo (Zucchini)	cmocpeB663
CmoCh04G021950	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G021950	Cucurbita pepo (Zucchini)	cmocpeB691
CmoCh04G021950	Bottle gourd (USVL1VR-Ls)	cmolsiB677