CmoCh04G021940 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G021940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	hydroxyproline-rich glycoprotein family protein
Location	Cmo_Chr04 : 16255535 .. 16255951 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCCTTTCAATTCTCTCCTCTTTCTCGCCCTCCTCCTTCTAATCTCCCCCTCCTCCTCCTCCGCCGCCGTTCGCCGCCTCGACGACACCCCCGCCGACCCCACCGTCAAGTGCTCCCCATGTGAACAAAACCCCCCATCTCCTCCTCCTCCACCGGTCTACCCCTCCCCTCCGCCGCCCTCTCCTCCACCGCCGGACGTTGTCATCTACTACTCTCCTCCTCCCCCCCCTAAGAAGGATCACAAGAACGACGACTGCCCACCGCCGCCGGCTCCCAACTTCATGTACATAACCGGCCCTCCCGGCGACCTCTACCCCATCGACCAAAGTTATAACGCTGCCTCCCGGAGACTCGTCTCCACCGCAGCCTCCGCCGTGGTTGGGTTGGCTGTTGCTGGGGTTCTGATGATGTAA

mRNA sequence

ATGCTTCCTTTCAATTCTCTCCTCTTTCTCGCCCTCCTCCTTCTAATCTCCCCCTCCTCCTCCTCCGCCGCCGTTCGCCGCCTCGACGACACCCCCGCCGACCCCACCGTCAAGTGCTCCCCATGTGAACAAAACCCCCCATCTCCTCCTCCTCCACCGGTCTACCCCTCCCCTCCGCCGCCCTCTCCTCCACCGCCGGACGTTGTCATCTACTACTCTCCTCCTCCCCCCCCTAAGAAGGATCACAAGAACGACGACTGCCCACCGCCGCCGGCTCCCAACTTCATGTACATAACCGGCCCTCCCGGCGACCTCTACCCCATCGACCAAAGTTATAACGCTGCCTCCCGGAGACTCGTCTCCACCGCAGCCTCCGCCGTGGTTGGGTTGGCTGTTGCTGGGGTTCTGATGATGTAA

Coding sequence (CDS)

ATGCTTCCTTTCAATTCTCTCCTCTTTCTCGCCCTCCTCCTTCTAATCTCCCCCTCCTCCTCCTCCGCCGCCGTTCGCCGCCTCGACGACACCCCCGCCGACCCCACCGTCAAGTGCTCCCCATGTGAACAAAACCCCCCATCTCCTCCTCCTCCACCGGTCTACCCCTCCCCTCCGCCGCCCTCTCCTCCACCGCCGGACGTTGTCATCTACTACTCTCCTCCTCCCCCCCCTAAGAAGGATCACAAGAACGACGACTGCCCACCGCCGCCGGCTCCCAACTTCATGTACATAACCGGCCCTCCCGGCGACCTCTACCCCATCGACCAAAGTTATAACGCTGCCTCCCGGAGACTCGTCTCCACCGCAGCCTCCGCCGTGGTTGGGTTGGCTGTTGCTGGGGTTCTGATGATGTAA

Homology

[Close]

BLAST of CmoCh04G021940 vs. TrEMBL
Match: A0A0A0KPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571580 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.5e-40
Identity = 102/142 (71.83%), Postives = 116/142 (81.69%), Query Frame = 1


Query: 1   MLPFNSLLFLALLLLISPSSS--SAAVRRLDDT--PADPTVKCSPCEQNPPSPPPPPVYP 60
           MLP   LLFL  LLLISPSS+  S  VRRLDDT  P DP VKC+PCEQNPPSPPPP VYP
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYP 60

Query: 61  SPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAS 120
           SPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPP+P+FMYITGPPGDLYPIDQ YNAA 
Sbjct: 61  SPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDQGYNAAG 120

Query: 121 RRLVSTAASAVVGLAVAGVLMM 139
           RR    +A+ VVG+ +AG+L++
Sbjct: 121 RR----SAATVVGVVLAGLLLV 138

[Close]

BLAST of CmoCh04G021940 vs. TrEMBL
Match: B9HJA5_POPTR (Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0008s12800g PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.1e-17
Identity = 71/146 (48.63%), Postives = 90/146 (61.64%), Query Frame = 1


Query: 4   FNSLLFLALLLLISPSSSSAAVRRLDDT--PADPTVKCSPCEQNPPSPP-PPPVYPSPPP 63
           FNS + L+LLL +        +R+LD+T  P     KCSPC  +PP P  PP VYPSPPP
Sbjct: 8   FNSFMLLSLLLFVVAPVHGLNLRKLDETTVPGPTEEKCSPCNPSPPPPSLPPVVYPSPPP 67

Query: 64  PSPPPPDVVIY-------YSPPPPPKKDHKNDDCPPPPAPNF--MYITGPPGDLYPIDQS 123
           PSPPPP  V+Y         PPP PKK     +CPPPPAP+   +YITGPPG+LYP+D+ 
Sbjct: 68  PSPPPPSPVLYPPPPPAPVLPPPTPKKPPSGYNCPPPPAPSKYDLYITGPPGELYPVDKD 127

Query: 124 YNAASRRLVSTAASAVVGLAVAGVLM 138
            NAASR  VS     ++G  + G+L+
Sbjct: 128 VNAASRHAVS--LQVLIGCGLIGLLV 151

[Close]

BLAST of CmoCh04G021940 vs. TrEMBL
Match: A0A0S3T313_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G061900 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-13
Identity = 58/118 (49.15%), Postives = 79/118 (66.95%), Query Frame = 1


Query: 8   LFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCE----QNPP-----SPPPPPVYPSP 67
           L L L+ + +P +   + R+LD+T  +   KCSPCE     +PP     SPPPP +YPSP
Sbjct: 16  LILVLICVTTPINGEES-RKLDET-TNGNEKCSPCEGGSTPSPPIIEYLSPPPPIIYPSP 75

Query: 68  PPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAS 117
           PPPSPPPP   +Y SPPPP  K   +  CPPPP+  ++Y+TGPPGDLYP+D++++ AS
Sbjct: 76  PPPSPPPP--YLYSSPPPPSPKKPPSSYCPPPPSSAYLYMTGPPGDLYPVDENFSGAS 129

[Close]

BLAST of CmoCh04G021940 vs. TrEMBL
Match: A0A0L9UT96_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g108500 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-13
Identity = 58/118 (49.15%), Postives = 79/118 (66.95%), Query Frame = 1


Query: 8   LFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCE----QNPP-----SPPPPPVYPSP 67
           L L L+ + +P +   + R+LD+T  +   KCSPCE     +PP     SPPPP +YPSP
Sbjct: 16  LILVLICVTTPINGEES-RKLDET-TNGNEKCSPCEGGSTPSPPIIEYLSPPPPIIYPSP 75

Query: 68  PPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAS 117
           PPPSPPPP   +Y SPPPP  K   +  CPPPP+  ++Y+TGPPGDLYP+D++++ AS
Sbjct: 76  PPPSPPPP--YLYSSPPPPSPKKPPSSYCPPPPSSAYLYMTGPPGDLYPVDENFSGAS 129

[Close]

BLAST of CmoCh04G021940 vs. TrEMBL
Match: A0A0D3CCL8_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-12
Identity = 64/135 (47.41%), Postives = 88/135 (65.19%), Query Frame = 1


Query: 6   SLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSP-CEQNPPSPPPPPVYPSPPPPSPP 65
           +LL  ++++  S SS S   R+LD+   DP +KCSP C QNPP P PPP  PSPPPP+ P
Sbjct: 22  TLLTCSVIINASSSSESVNTRKLDEV--DP-IKCSPSCVQNPPPPSPPP--PSPPPPACP 81

Query: 66  PPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAASRRLVSTA- 125
           PP  +     PPPPKK   N  CPPPP  NF+YITGPPG+LYP+D+ + AA+ +  +   
Sbjct: 82  PPPAL-----PPPPKKVSPN--CPPPPPANFLYITGPPGNLYPVDEQFGAAAGKSSTVVK 141

Query: 126 ASAVVGLAVAGVLMM 139
            S ++G  + G+L++
Sbjct: 142 LSGLIGFGLMGLLVL 144

[Close]

BLAST of CmoCh04G021940 vs. TAIR10
Match: AT1G23040.1 (AT1G23040.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 74.7 bits (182), Expect = 4.9e-14
Identity = 68/138 (49.28%), Postives = 89/138 (64.49%), Query Frame = 1


Query: 6   SLLFLALLL---LISPSSSSAA---VRRLDDTPADPTVKCSP-CEQNPPSPPPPPVYPSP 65
           +++ +ALL    LI+ SSSS A    R+LD+   DP +KCSP C QNPP P PPP  PSP
Sbjct: 15  TVMMIALLTCPTLINGSSSSDASLEARKLDEV--DP-IKCSPSCIQNPPPPSPPP--PSP 74

Query: 66  PPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAASRR 125
           PPP+ PPP  +    PPPPPKK   +  CPPPP  NF+YITGPPG+LYP+D+ + AA+ +
Sbjct: 75  PPPACPPPPAL----PPPPPKK--VSSYCPPPPPANFLYITGPPGNLYPVDEQFGAAAGK 134

Query: 126 LVSTAASAVVGLAVAGVL 137
             S     + GL   G++
Sbjct: 135 --SFMVVKLSGLIAFGIM 139

[Close]

BLAST of CmoCh04G021940 vs. TAIR10
Match: AT1G70990.1 (AT1G70990.1 proline-rich family protein)

HSP 1 Score: 65.9 bits (159), Expect = 2.3e-11
Identity = 60/137 (43.80%), Postives = 83/137 (60.58%), Query Frame = 1


Query: 6   SLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPPPS--- 65
           +++FL   ++I+ S SS   R+L++ P    +KC+PC QN P P PPP  PSPPPPS   
Sbjct: 56  TVVFLTFPMIINASDSSTN-RKLEEDP----IKCTPCLQNIPPPSPPP--PSPPPPSQAC 115

Query: 66  PPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAA-SRRLVS 125
           PPPP       PP PPKK +    CPPPP+  ++Y+TGPPG+LYPIDQ + AA ++    
Sbjct: 116 PPPP------LPPSPPKKSY----CPPPPS-TYIYMTGPPGELYPIDQQFGAAVTKSFTV 174

Query: 126 TAASAVVGLAVAGVLMM 139
              S ++   V   LM+
Sbjct: 176 VKISGLIAFGVMSFLMI 174

[Close]

BLAST of CmoCh04G021940 vs. TAIR10
Match: AT1G02405.1 (AT1G02405.1 proline-rich family protein)

HSP 1 Score: 58.9 bits (141), Expect = 2.8e-09
Identity = 60/135 (44.44%), Postives = 79/135 (58.52%), Query Frame = 1


Query: 8   LFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQN----PPSPPPPPVYPSPPPPSP 67
           + +A+++L SP   +A     +D+ A+  V C PC QN    PPSPPPP   PSPPPPSP
Sbjct: 15  ILMAIVILASPIIINA-----EDSSAEVDVNCIPCLQNQPPPPPSPPPPSCTPSPPPPSP 74

Query: 68  PPP-DVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAASRRLVST 127
           PPP       SP PPP         PPPP PN+++ T PPGDLYPI+  Y AA    V+ 
Sbjct: 75  PPPKKSSCPPSPLPPP---------PPPPPPNYVF-TYPPGDLYPIENYYGAA----VAV 130

Query: 128 AASAVVGLAVAGVLM 138
            + +V+ L V GV++
Sbjct: 135 ESFSVMKLFVFGVMV 130

[Close]

BLAST of CmoCh04G021940 vs. NCBI nr
Match: gi|659072900|ref|XP_008467156.1| (PREDICTED: extensin-like [Cucumis melo])

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41
Identity = 105/142 (73.94%), Postives = 119/142 (83.80%), Query Frame = 1


Query: 1   MLPFNSLLFLALLLLISPSSS--SAAVRRLDDT--PADPTVKCSPCEQNPPSPPPPPVYP 60
           MLP   LLFL  LLLISPSS+  SA VRRLDDT  P DP VKC+PCEQNPPSPPPP VYP
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSATVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPLVYP 60

Query: 61  SPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAS 120
           SPPPPSPPPPDVV YYSPPPP KK+ KN +CPPPP+P+FMYITGPPGDLYPIDQ+YNAA 
Sbjct: 61  SPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPIDQNYNAAG 120

Query: 121 RRLVSTAASAVVGLAVAGVLMM 139
           RR   +AA+A VG+ +AG+L++
Sbjct: 121 RR---SAAAAAVGVVLAGLLLV 139

[Close]

BLAST of CmoCh04G021940 vs. NCBI nr
Match: gi|449465519|ref|XP_004150475.1| (PREDICTED: leucine-rich repeat extensin-like protein 6 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 6.5e-40
Identity = 102/142 (71.83%), Postives = 116/142 (81.69%), Query Frame = 1


Query: 1   MLPFNSLLFLALLLLISPSSS--SAAVRRLDDT--PADPTVKCSPCEQNPPSPPPPPVYP 60
           MLP   LLFL  LLLISPSS+  S  VRRLDDT  P DP VKC+PCEQNPPSPPPP VYP
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYP 60

Query: 61  SPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAS 120
           SPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPP+P+FMYITGPPGDLYPIDQ YNAA 
Sbjct: 61  SPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDQGYNAAG 120

Query: 121 RRLVSTAASAVVGLAVAGVLMM 139
           RR    +A+ VVG+ +AG+L++
Sbjct: 121 RR----SAATVVGVVLAGLLLV 138

[Close]

BLAST of CmoCh04G021940 vs. NCBI nr
Match: gi|224099475|ref|XP_002311499.1| (hydroxyproline-rich glycoprotein [Populus trichocarpa])

HSP 1 Score: 96.3 bits (238), Expect = 4.5e-17
Identity = 71/146 (48.63%), Postives = 90/146 (61.64%), Query Frame = 1


Query: 4   FNSLLFLALLLLISPSSSSAAVRRLDDT--PADPTVKCSPCEQNPPSPP-PPPVYPSPPP 63
           FNS + L+LLL +        +R+LD+T  P     KCSPC  +PP P  PP VYPSPPP
Sbjct: 8   FNSFMLLSLLLFVVAPVHGLNLRKLDETTVPGPTEEKCSPCNPSPPPPSLPPVVYPSPPP 67

Query: 64  PSPPPPDVVIY-------YSPPPPPKKDHKNDDCPPPPAPNF--MYITGPPGDLYPIDQS 123
           PSPPPP  V+Y         PPP PKK     +CPPPPAP+   +YITGPPG+LYP+D+ 
Sbjct: 68  PSPPPPSPVLYPPPPPAPVLPPPTPKKPPSGYNCPPPPAPSKYDLYITGPPGELYPVDKD 127

Query: 124 YNAASRRLVSTAASAVVGLAVAGVLM 138
            NAASR  VS     ++G  + G+L+
Sbjct: 128 VNAASRHAVS--LQVLIGCGLIGLLV 151

[Close]

BLAST of CmoCh04G021940 vs. NCBI nr
Match: gi|923863894|ref|XP_013707451.1| (PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like [Brassica napus])

HSP 1 Score: 84.0 bits (206), Expect = 2.3e-13
Identity = 67/135 (49.63%), Postives = 88/135 (65.19%), Query Frame = 1


Query: 6   SLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSP-CEQNPPSPPPPPVYPSPPPPSPP 65
           +LL   +++  S  SSSA +R+LD+   DP +KCSP C QNPP P PPP   SPPPPSPP
Sbjct: 22  TLLTRPIIINASSDSSSANMRKLDEV--DP-IKCSPSCIQNPPPPSPPP---SPPPPSPP 81

Query: 66  PPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAASRRLVSTAA 125
           PP      + PPPPKK   N  CPPPP  NF+YITGPPG+LYP+D+ + AA+ +  +   
Sbjct: 82  PPACPPPPALPPPPKKVSPN--CPPPPPANFLYITGPPGNLYPVDEQFGAAAGKSFTVVK 141

Query: 126 SA-VVGLAVAGVLMM 139
            A ++G  V  VL++
Sbjct: 142 LAGLIGFGVLWVLVL 148

[Close]

BLAST of CmoCh04G021940 vs. NCBI nr
Match: gi|743784728|ref|XP_011023219.1| (PREDICTED: leucine-rich repeat extensin-like protein 6 [Populus euphratica])

HSP 1 Score: 83.6 bits (205), Expect = 3.0e-13
Identity = 68/149 (45.64%), Postives = 88/149 (59.06%), Query Frame = 1


Query: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDDT--PADPTVKCSPCEQNPPSPP-PPPVYPS 60
           M  FNS + L+LLL +        +R+LD+T  P     KCSPC  +PP P  PP VYPS
Sbjct: 5   MSSFNSFMLLSLLLFVVAPVHGLNLRKLDETTVPGPTEEKCSPCNPSPPPPSLPPVVYPS 64

Query: 61  --PPPPSPPPPDVVIYYSP-----PPPPKKDHKNDDCPPPPAPN--FMYITGPPGDLYPI 120
             PPPPSPPPP  V+Y  P     PPP  K   +  CPPPP P+   +YITGPPG++YP+
Sbjct: 65  PPPPPPSPPPPPPVLYPPPPAPVRPPPTPKKPPSGYCPPPPPPSKYDLYITGPPGEVYPV 124

Query: 121 DQSYNAASRRLVSTAASAVVGLAVAGVLM 138
           D+  NAASR  VS     ++G  + G+ +
Sbjct: 125 DKDVNAASRHAVS--LQVLIGCGLIGLFV 151

The following BLAST results are available for this feature:

BLAST of CmoCh04G021940 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G021940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPJ1_CUCSA	4.5e-40	71.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571580 PE=4 SV=1	[more]
B9HJA5_POPTR	3.1e-17	48.63	Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0008s12800g PE=...	[more]
A0A0S3T313_PHAAN	2.1e-13	49.15	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G061900 PE=...	[more]
A0A0L9UT96_PHAAN	2.1e-13	49.15	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g108500 PE=4 SV=1	[more]
A0A0D3CCL8_BRAOL	1.0e-12	47.41	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]

BLAST of CmoCh04G021940 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23040.1	4.9e-14	49.28	hydroxyproline-rich glycoprotein family protein	[more]
AT1G70990.1	2.3e-11	43.80	proline-rich family protein	[more]
AT1G02405.1	2.8e-09	44.44	proline-rich family protein	[more]

BLAST of CmoCh04G021940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072900\|ref\|XP_008467156.1\|	1.5e-41	73.94	PREDICTED: extensin-like [Cucumis melo]	[more]
gi\|449465519\|ref\|XP_004150475.1\|	6.5e-40	71.83	PREDICTED: leucine-rich repeat extensin-like protein 6 [Cucumis sativus]	[more]
gi\|224099475\|ref\|XP_002311499.1\|	4.5e-17	48.63	hydroxyproline-rich glycoprotein [Populus trichocarpa]	[more]
gi\|923863894\|ref\|XP_013707451.1\|	2.3e-13	49.63	PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like [Brass...	[more]
gi\|743784728\|ref\|XP_011023219.1\|	3.0e-13	45.64	PREDICTED: leucine-rich repeat extensin-like protein 6 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021940.1	CmoCh04G021940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35094	FAMILY NOT NAMED	coord: 7..138 score: 5.2
None	No IPR available	PANTHER	PTHR35094:SF1	SUBFAMILY NOT NAMED	coord: 7..138 score: 5.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G021940	CsaV3_5G028600	Cucumber (Chinese Long) v3	cmocucB0878
CmoCh04G021940	Carg26356	Silver-seed gourd	carcmoB0271
CmoCh04G021940	Carg27267	Silver-seed gourd	carcmoB0452

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G021940	Cucumber (Chinese Long) v3	cmocucB0858
CmoCh04G021940	Watermelon (97103) v2	cmowmbB676
CmoCh04G021940	Watermelon (97103) v2	cmowmbB740
CmoCh04G021940	Wax gourd	cmowgoB0824
CmoCh04G021940	Wax gourd	cmowgoB0909
CmoCh04G021940	Cucurbita moschata (Rifu)	cmocmoB344
CmoCh04G021940	Cucurbita moschata (Rifu)	cmocmoB254
CmoCh04G021940	Cucurbita moschata (Rifu)	cmocmoB469
CmoCh04G021940	Cucumber (Gy14) v1	cgycmoB0777
CmoCh04G021940	Cucumber (Gy14) v1	cgycmoB0800
CmoCh04G021940	Cucurbita maxima (Rimu)	cmacmoB301
CmoCh04G021940	Cucurbita maxima (Rimu)	cmacmoB426
CmoCh04G021940	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G021940	Cucurbita maxima (Rimu)	cmacmoB742
CmoCh04G021940	Wild cucumber (PI 183967)	cmocpiB733
CmoCh04G021940	Wild cucumber (PI 183967)	cmocpiB750
CmoCh04G021940	Cucumber (Chinese Long) v2	cmocuB724
CmoCh04G021940	Cucumber (Chinese Long) v2	cmocuB742
CmoCh04G021940	Melon (DHL92) v3.5.1	cmomeB627
CmoCh04G021940	Melon (DHL92) v3.5.1	cmomeB654
CmoCh04G021940	Watermelon (Charleston Gray)	cmowcgB636
CmoCh04G021940	Watermelon (Charleston Gray)	cmowcgB666
CmoCh04G021940	Watermelon (97103) v1	cmowmB705
CmoCh04G021940	Watermelon (97103) v1	cmowmB706
CmoCh04G021940	Cucurbita pepo (Zucchini)	cmocpeB645
CmoCh04G021940	Cucurbita pepo (Zucchini)	cmocpeB650
CmoCh04G021940	Cucurbita pepo (Zucchini)	cmocpeB663
CmoCh04G021940	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G021940	Cucurbita pepo (Zucchini)	cmocpeB691
CmoCh04G021940	Bottle gourd (USVL1VR-Ls)	cmolsiB610
CmoCh04G021940	Bottle gourd (USVL1VR-Ls)	cmolsiB677
CmoCh04G021940	Cucumber (Gy14) v2	cgybcmoB637
CmoCh04G021940	Cucumber (Gy14) v2	cgybcmoB655
CmoCh04G021940	Melon (DHL92) v3.6.1	cmomedB716
CmoCh04G021940	Melon (DHL92) v3.6.1	cmomedB744
CmoCh04G021940	Silver-seed gourd	carcmoB1137
CmoCh04G021940	Silver-seed gourd	carcmoB1413