CmoCh04G020940 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G020940
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
LocationCmo_Chr04 : 12950807 .. 12951151 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTTTCATGTTCCTCCTCGCCCTAACCAATGCTCAAAACACCCCTGGTGACTATCTCGCGCTTCACAACCGCGCTCGAGCCCAGGTCGGCGTCGGCCTCATGCAATGGAGCAATACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACTGTGGTGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGTGA

mRNA sequence

ATGGCCGCTTTCATGTTCCTCCTCGCCCTAACCAATGCTCAAAACACCCCTGGTGACTATCTCGCGCTTCACAACCGCGCTCGAGCCCAGGTCGGCGTCGGCCTCATGCAATGGAGCAATACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACTGTGGTGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGTGA

Coding sequence (CDS)

ATGGCCGCTTTCATGTTCCTCCTCGCCCTAACCAATGCTCAAAACACCCCTGGTGACTATCTCGCGCTTCACAACCGCGCTCGAGCCCAGGTCGGCGTCGGCCTCATGCAATGGAGCAATACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACTGTGGTGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGTGA
Homology
[Close]
BLAST of CmoCh04G020940 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 8.8e-35
Identity = 67/111 (60.36%), Postives = 79/111 (71.17%), Query Frame = 1 

Query: 4   FMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHST 63
           F  L+  + AQN+P DYL  HN AR QVGVG M W N +AAYAQ YA +R GDC MIHS 
Sbjct: 14  FAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSH 73

Query: 64  GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GPYGEN+AA  +P+     AVK+W +EK  YD+ SN CVGG CGHYTQ+VW
Sbjct: 74  GPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVW 123

[Close]
BLAST of CmoCh04G020940 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.7e-28
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 1 

Query: 7   LLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPY 66
           L+  + AQ++P DYL +HN+AR  VGVG MQW   VAAYA++YAE+ +G+C +IHS GPY
Sbjct: 20  LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 79

Query: 67  GENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GEN+A G   + + V AV +W +EK  Y++A+N C  G CGHYTQ+VW
Sbjct: 80  GENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVW 125

[Close]
BLAST of CmoCh04G020940 vs. Swiss-Prot
Match: PR04_SOLLC (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.0e-27
Identity = 60/103 (58.25%), Postives = 76/103 (73.79%), Query Frame = 1 

Query: 13  AQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAA 72
           AQN+P DYLA+HN ARAQVGVG M W   +A+ AQ YA  R GDC +IHS    GEN+A 
Sbjct: 24  AQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAK 83

Query: 73  GYYPEFTVVDAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 115
           G   +FT   AV+LW +E+P Y++A+N+CVGG+ CGHYTQ+VW
Sbjct: 84  G-GGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVW 123

[Close]
BLAST of CmoCh04G020940 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.2e-27
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 1 

Query: 11  TNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENI 70
           + AQ    ++L  HN AR +VGVG M W + +AAYAQ YA +R  DC MIHS GPYGEN+
Sbjct: 19  SQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENL 78

Query: 71  AAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 115
           AA  +P+     AVK+W +EK  YD+ SN C  G+ CGHYTQ+VW
Sbjct: 79  AAA-FPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVW 122

[Close]
BLAST of CmoCh04G020940 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.8e-27
Identity = 56/112 (50.00%), Postives = 71/112 (63.39%), Query Frame = 1 

Query: 4   FMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHST 63
           F+ +   ++AQN+  DYL  HN ARA VGV  + W N VAAYAQ Y  +   DC ++HS 
Sbjct: 21  FLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSH 80

Query: 64  GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 115
           G YGEN+A G     T   AV++W +EK  YDH SN C  G+ CGHYTQ+VW
Sbjct: 81  GQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

[Close]
BLAST of CmoCh04G020940 vs. TrEMBL
Match: A0A0A0KHP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 5.5e-44
Identity = 80/110 (72.73%), Postives = 92/110 (83.64%), Query Frame = 1 

Query: 5   MFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTG 64
           MFL  LT+AQN+P DY++LHN+ARA VGVG M W NTVAAYAQ+YA KRK DCA++HSTG
Sbjct: 1   MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 65  PYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           PYGENIA G+YPEFT  D VKLW  EK LYD+ASN C GG+CGHYTQ+VW
Sbjct: 61  PYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVW 110

[Close]
BLAST of CmoCh04G020940 vs. TrEMBL
Match: A0A0A0LLX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 9.4e-44
Identity = 80/111 (72.07%), Postives = 91/111 (81.98%), Query Frame = 1 

Query: 4   FMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHST 63
           F F   LT+AQN P DY++LHN+ARA VGVG M W+NTVAAYAQ+YA KRK DCA+IHST
Sbjct: 8   FTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKNDCALIHST 67

Query: 64  GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GPYGENIA GYYPEFT  D VK+W  EK LYD+ASN C GG+CGHYTQ+VW
Sbjct: 68  GPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKGGDCGHYTQVVW 118

[Close]
BLAST of CmoCh04G020940 vs. TrEMBL
Match: A0A0A0LSG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 5.2e-42
Identity = 78/111 (70.27%), Postives = 89/111 (80.18%), Query Frame = 1 

Query: 4   FMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHST 63
           F FL  LT AQ +P DY++LHN+ARA V VG M W+ TVAAYAQ+YA KRK DCA++HST
Sbjct: 8   FTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKNDCALVHST 67

Query: 64  GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GPYGENIA GYYPEFT  D VKLW  EK LYD+ASN C GG+CGHYTQ+VW
Sbjct: 68  GPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVW 118

[Close]
BLAST of CmoCh04G020940 vs. TrEMBL
Match: G1FU08_9ROSI (Pathogenesis-related protein OS=Vitis quinquangularis GN=PR-1 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.0e-34
Identity = 69/102 (67.65%), Postives = 77/102 (75.49%), Query Frame = 1 

Query: 13  AQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAA 72
           AQN+P DYL  HN ARAQVGVG M W NTVAAYAQ YA++R GDC ++HS GPYGEN+A 
Sbjct: 24  AQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNYAKQRIGDCNLVHSGGPYGENLAR 83

Query: 73  GYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           G  P  T  DAV LW  EK  YDH SN CVGG+CGHYTQ+VW
Sbjct: 84  G-SPSLTGTDAVNLWVGEKSNYDHNSNSCVGGQCGHYTQVVW 124

[Close]
BLAST of CmoCh04G020940 vs. TrEMBL
Match: E2GEV9_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-33
Identity = 68/102 (66.67%), Postives = 78/102 (76.47%), Query Frame = 1 

Query: 13  AQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAA 72
           AQN+P DY+  HN ARAQVGVG M W+NTVAAYAQ YA +R GDC ++HS GPYGENIA 
Sbjct: 25  AQNSPQDYVDAHNAARAQVGVGPMTWNNTVAAYAQNYANQRIGDCNLVHSGGPYGENIAW 84

Query: 73  GYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           G  P  T  DAV +W  EKP YD+ SN CVGG+CGHYTQ+VW
Sbjct: 85  G-SPSLTGTDAVNMWVGEKPNYDYNSNSCVGGKCGHYTQVVW 125

[Close]
BLAST of CmoCh04G020940 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-34
Identity = 65/115 (56.52%), Postives = 79/115 (68.70%), Query Frame = 1 

Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           + A  FL+  TNAQNTP DYL  HN ARAQVGV  + W  T+AAYA  Y+  RK DC ++
Sbjct: 11  IVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLV 70

Query: 61  HSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGG-ECGHYTQMVW 115
           HS GPYGEN+A G    F+ + AVKLW +EKP Y +A N C GG +C HYTQ+VW
Sbjct: 71  HSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVW 125

[Close]
BLAST of CmoCh04G020940 vs. TAIR10
Match: AT1G50050.1 (AT1G50050.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 125.9 bits (315), Expect = 1.5e-29
Identity = 63/116 (54.31%), Postives = 75/116 (64.66%), Query Frame = 1 

Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           + A  FL+  TNAQN   DYL  HN ARAQVGV  + W   VAAYA  YA  RK DC++ 
Sbjct: 11  IVAISFLVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCSLT 70

Query: 61  HST-GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGG-ECGHYTQMVW 115
            ST G YGEN+A G    FT V AV LW NEKP Y++ +N C+G  +C HYTQ+VW
Sbjct: 71  PSTGGSYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQVVW 126

[Close]
BLAST of CmoCh04G020940 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 125.9 bits (315), Expect = 1.5e-29
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 1 

Query: 7   LLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPY 66
           L+  + AQ++P DYL +HN+AR  VGVG MQW   VAAYA++YAE+ +G+C +IHS GPY
Sbjct: 20  LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 79

Query: 67  GENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GEN+A G   + + V AV +W +EK  Y++A+N C  G CGHYTQ+VW
Sbjct: 80  GENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVW 125

[Close]
BLAST of CmoCh04G020940 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 125.2 bits (313), Expect = 2.6e-29
Identity = 61/112 (54.46%), Postives = 79/112 (70.54%), Query Frame = 1 

Query: 4   FMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHST 63
           F+ L+    AQ++P D+LA+HNRARA+VGVG ++W   VAAYA+ YA +RKGDCAM HS+
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 64  GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCV-GGECGHYTQMVW 115
           G YGENIA       T V AV +W +E+  YD+ SN C    +CGHYTQ+VW
Sbjct: 77  GSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVW 127

[Close]
BLAST of CmoCh04G020940 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 118.6 bits (296), Expect = 2.5e-27
Identity = 55/108 (50.93%), Postives = 74/108 (68.52%), Query Frame = 1 

Query: 7   LLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPY 66
           L+    AQ++  DY+  HN+AR+Q+GVG MQW   +AAYA+ YA + KGDC ++HS GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 67  GENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GEN+A     + + V AV LW NEK  Y++ +N C  G CGHYTQ+VW
Sbjct: 80  GENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVW 125

[Close]
BLAST of CmoCh04G020940 vs. NCBI nr
Match: gi|778722387|ref|XP_011658476.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 81/111 (72.97%), Postives = 93/111 (83.78%), Query Frame = 1 

Query: 4   FMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHST 63
           FMFL  LT+AQN+P DY++LHN+ARA VGVG M W NTVAAYAQ+YA KRK DCA++HST
Sbjct: 8   FMFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHST 67

Query: 64  GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GPYGENIA G+YPEFT  D VKLW  EK LYD+ASN C GG+CGHYTQ+VW
Sbjct: 68  GPYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVW 118

[Close]
BLAST of CmoCh04G020940 vs. NCBI nr
Match: gi|700193135|gb|KGN48339.1| (hypothetical protein Csa_6G483242 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 7.9e-44
Identity = 80/110 (72.73%), Postives = 92/110 (83.64%), Query Frame = 1 

Query: 5   MFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTG 64
           MFL  LT+AQN+P DY++LHN+ARA VGVG M W NTVAAYAQ+YA KRK DCA++HSTG
Sbjct: 1   MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 65  PYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           PYGENIA G+YPEFT  D VKLW  EK LYD+ASN C GG+CGHYTQ+VW
Sbjct: 61  PYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVW 110

[Close]
BLAST of CmoCh04G020940 vs. NCBI nr
Match: gi|700207816|gb|KGN62935.1| (hypothetical protein Csa_2G381130 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 80/111 (72.07%), Postives = 91/111 (81.98%), Query Frame = 1 

Query: 4   FMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHST 63
           F F   LT+AQN P DY++LHN+ARA VGVG M W+NTVAAYAQ+YA KRK DCA+IHST
Sbjct: 8   FTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKNDCALIHST 67

Query: 64  GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GPYGENIA GYYPEFT  D VK+W  EK LYD+ASN C GG+CGHYTQ+VW
Sbjct: 68  GPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKGGDCGHYTQVVW 118

[Close]
BLAST of CmoCh04G020940 vs. NCBI nr
Match: gi|659109009|ref|XP_008454501.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-42
Identity = 79/113 (69.91%), Postives = 94/113 (83.19%), Query Frame = 1 

Query: 2   AAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIH 61
           A+FMFL  LT+AQN+P DY+ALHN+ARA VGVG M W++T+AAYA+AYA +R  DCA++H
Sbjct: 6   ASFMFLFFLTHAQNSPQDYIALHNKARAAVGVGPMTWNSTLAAYAEAYANQRIKDCALVH 65

Query: 62  STGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           S GPYGENIA GYYPEFT  D VKLW  EK LYD+ASN C GG+CGHYTQ+VW
Sbjct: 66  SKGPYGENIAVGYYPEFTGADGVKLWVAEKRLYDYASNSCKGGDCGHYTQLVW 118

[Close]
BLAST of CmoCh04G020940 vs. NCBI nr
Match: gi|700207817|gb|KGN62936.1| (hypothetical protein Csa_2G381380 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 7.4e-42
Identity = 78/111 (70.27%), Postives = 89/111 (80.18%), Query Frame = 1 

Query: 4   FMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHST 63
           F FL  LT AQ +P DY++LHN+ARA V VG M W+ TVAAYAQ+YA KRK DCA++HST
Sbjct: 8   FTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKNDCALVHST 67

Query: 64  GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GPYGENIA GYYPEFT  D VKLW  EK LYD+ASN C GG+CGHYTQ+VW
Sbjct: 68  GPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVW 118

The following BLAST results are available for this feature:
BLAST of CmoCh04G020940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRB1_TOBAC8.8e-3560.36Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1[more]
PR1_ARATH2.7e-2853.70Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1[more]
PR04_SOLLC4.0e-2758.25Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1[more]
PR1A_SOLLC5.2e-2753.33Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1[more]
PR1B_TOBAC6.8e-2750.00Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1[more]
BLAST of CmoCh04G020940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHP4_CUCSA5.5e-4472.73Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1[more]
A0A0A0LLX7_CUCSA9.4e-4472.07Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1[more]
A0A0A0LSG5_CUCSA5.2e-4270.27Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1[more]
G1FU08_9ROSI3.0e-3467.65Pathogenesis-related protein OS=Vitis quinquangularis GN=PR-1 PE=2 SV=1[more]
E2GEV9_9ROSI1.2e-3366.67Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1[more]
BLAST of CmoCh04G020940 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G50060.12.1e-3456.52 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT1G50050.11.5e-2954.31 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G14610.11.5e-2953.70 pathogenesis-related gene 1[more]
AT4G33720.12.6e-2954.46 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G14580.12.5e-2750.93 basic pathogenesis-related protein 1[more]
BLAST of CmoCh04G020940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778722387|ref|XP_011658476.1|1.6e-4472.97PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus][more]
gi|700193135|gb|KGN48339.1|7.9e-4472.73hypothetical protein Csa_6G483242 [Cucumis sativus][more]
gi|700207816|gb|KGN62935.1|1.4e-4372.07hypothetical protein Csa_2G381130 [Cucumis sativus][more]
gi|659109009|ref|XP_008454501.1|2.0e-4269.91PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo][more]
gi|700207817|gb|KGN62936.1|7.4e-4270.27hypothetical protein Csa_2G381380 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR002413V5_allergen
IPR014044CAP_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G020940.1CmoCh04G020940.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 83..96
score: 1.6E-8coord: 36..54
score: 1.6E-8coord: 106..114
score: 1.
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 1..114
score: 4.7
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 81..96
score: 6.2E-5coord: 36..54
score: 6.2E-5coord: 105..114
score: 6.
IPR014044CAP domainGENE3DG3DSA:3.40.33.10coord: 18..114
score: 2.9
IPR014044CAP domainPFAMPF00188CAPcoord: 21..114
score: 8.3
IPR014044CAP domainSMARTSM00198SCP_3coord: 15..114
score: 1.6
IPR014044CAP domainunknownSSF55797PR-1-likecoord: 10..114
score: 1.83
NoneNo IPR availablePANTHERPTHR10334:SF223F2J10.6 PROTEIN-RELATEDcoord: 1..114
score: 4.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G020940CmaCh04G020170Cucurbita maxima (Rimu)cmacmoB741
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G020940Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G020940Cucurbita pepo (Zucchini)cmocpeB680
CmoCh04G020940Cucurbita pepo (Zucchini)cmocpeB682
CmoCh04G020940Cucurbita pepo (Zucchini)cmocpeB685