CmoCh04G020920 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G020920
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Location	Cmo_Chr04 : 12944306 .. 12944713 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACTTTCATGGCCACTTTCATTTTCTTCCTCGCCCTAACCAACGCTCAAAACGCCCCCGGTGACTACCTCGCACTTCACAACCGAGCTCGAGCCCAGGTTGGCGTCGGACCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAACCGGGCCGTATGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGGCGCTGTATGATCATGCGTCGAATAAATGCATGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGCAAGGCTAATTCTTAG

mRNA sequence

ATGGCCACTTTCATGGCCACTTTCATTTTCTTCCTCGCCCTAACCAACGCTCAAAACGCCCCCGGTGACTACCTCGCACTTCACAACCGAGCTCGAGCCCAGGTTGGCGTCGGACCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAACCGGGCCGTATGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGGCGCTGTATGATCATGCGTCGAATAAATGCATGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGCAAGGCTAATTCTTAG

Coding sequence (CDS)

ATGGCCACTTTCATGGCCACTTTCATTTTCTTCCTCGCCCTAACCAACGCTCAAAACGCCCCCGGTGACTACCTCGCACTTCACAACCGAGCTCGAGCCCAGGTTGGCGTCGGACCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAACCGGGCCGTATGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGGCGCTGTATGATCATGCGTCGAATAAATGCATGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGCAAGGCTAATTCTTAG

Homology

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BLAST of CmoCh04G020920 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.7e-42
Identity = 82/132 (62.12%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 1   MATFMATFIFFLAL---TNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKR 60
           + T +A FI F  L   + AQN+P DYL  HN AR QVGVGPM W N +AAYAQ YA +R
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 61  KGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMV 120
            GDC MIHS GPYGEN+AA  +P+   A AVK+W +EK  YD+ SN C+GG CGHYTQ+V
Sbjct: 64  IGDCGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVV 123

Query: 121 WRSSVRLGCARV 130
           WR+SVRLGCARV
Sbjct: 124 WRNSVRLGCARV 134

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BLAST of CmoCh04G020920 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 7.2e-36
Identity = 71/131 (54.20%), Postives = 95/131 (72.52%), Query Frame = 1


Query: 1   MATFMATFIFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 60
           +  F+A     +  + AQ++P DYL +HN+AR  VGVGPMQW   VAAYA++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 61  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRS 120
           C +IHS GPYGEN+A G   + +G  AV +W +EKA Y++A+N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 121 SVRLGCARVPC 132
           SVRLGCA+V C
Sbjct: 130 SVRLGCAKVRC 138

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BLAST of CmoCh04G020920 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.1e-35
Identity = 74/133 (55.64%), Postives = 92/133 (69.17%), Query Frame = 1


Query: 4   FMATFIFFLAL--TNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDC 63
           F+A FI F+    + AQ    ++L  HN AR +VGVGPM W + +AAYAQ YA +R  DC
Sbjct: 6   FVACFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDC 65

Query: 64  AMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGE-CGHYTQMVWRS 123
            MIHS GPYGEN+AA  +P+   A AVK+W +EK  YD+ SN C  G+ CGHYTQ+VWR 
Sbjct: 66  GMIHSDGPYGENLAAA-FPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRK 125

Query: 124 SVRLGCARVPCKA 134
           SVRLGCARV C +
Sbjct: 126 SVRLGCARVRCNS 137

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BLAST of CmoCh04G020920 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-34
Identity = 70/131 (53.44%), Postives = 90/131 (68.70%), Query Frame = 1


Query: 5   MATFIFFLALTN---AQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDC 64
           ++T + FL +++   AQN+  DYL  HN ARA VGV P+ W + VAAYAQ YA +   DC
Sbjct: 15  VSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADC 74

Query: 65  AMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGE-CGHYTQMVWRS 124
            ++HS G YGEN+A G     T A AV++W +EK  YDH SN C  G+ CGHYTQ+VWR+
Sbjct: 75  NLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRN 134

Query: 125 SVRLGCARVPC 132
           SVR+GCARV C
Sbjct: 135 SVRVGCARVQC 145

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BLAST of CmoCh04G020920 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.3e-34
Identity = 70/131 (53.44%), Postives = 89/131 (67.94%), Query Frame = 1


Query: 5   MATFIFFLALTN---AQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDC 64
           ++T + FL +++   AQN+  DYL  HN ARA VGV P+ W N VAAYAQ Y  +   DC
Sbjct: 15  VSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADC 74

Query: 65  AMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGE-CGHYTQMVWRS 124
            ++HS G YGEN+A G     T A AV++W +EK  YDH SN C  G+ CGHYTQ+VWR+
Sbjct: 75  NLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRN 134

Query: 125 SVRLGCARVPC 132
           SVR+GCARV C
Sbjct: 135 SVRVGCARVKC 145

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BLAST of CmoCh04G020920 vs. TrEMBL
Match: A0A0A0LLX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.7e-55
Identity = 100/135 (74.07%), Postives = 112/135 (82.96%), Query Frame = 1


Query: 1   MATFMATFIFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 60
           MA F   F FF  LT+AQNAP DY++LHN+ARA VGVGPM W+NTVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPIFTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKND 60

Query: 61  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRS 120
           CA+IHSTGPYGENIA GYYPEFTGAD VK+W  EK LYD+ASN C GG+CGHYTQ+VWR+
Sbjct: 61  CALIHSTGPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPCKANS 136
           SV LGCARV CK  S
Sbjct: 121 SVHLGCARVACKGKS 135

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BLAST of CmoCh04G020920 vs. TrEMBL
Match: A0A0A0KHP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.6e-53
Identity = 94/127 (74.02%), Postives = 108/127 (85.04%), Query Frame = 1


Query: 9   IFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTG 68
           +F   LT+AQN+P DY++LHN+ARA VGVGPM W NTVAAYAQ+YA KRK DCA++HSTG
Sbjct: 1   MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 69  PYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRSSVRLGCAR 128
           PYGENIA G+YPEFTGAD VKLW  EK LYD+ASN C GG+CGHYTQ+VWR+SV LGCAR
Sbjct: 61  PYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCAR 120

Query: 129 VPCKANS 136
           VPCK  S
Sbjct: 121 VPCKGKS 127

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BLAST of CmoCh04G020920 vs. TrEMBL
Match: A0A0A0LSG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 7.7e-53
Identity = 96/135 (71.11%), Postives = 108/135 (80.00%), Query Frame = 1


Query: 1   MATFMATFIFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 60
           MA F  TF F   LT AQ +P DY++LHN+ARA V VGPM W+ TVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPTFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKND 60

Query: 61  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRS 120
           CA++HSTGPYGENIA GYYPEFTGAD VKLW  EK LYD+ASN C GG+CGHYTQ+VWR+
Sbjct: 61  CALVHSTGPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPCKANS 136
           SV LGCARV CK  S
Sbjct: 121 SVHLGCARVACKGKS 135

[Close]

BLAST of CmoCh04G020920 vs. TrEMBL
Match: G1FU08_9ROSI (Pathogenesis-related protein OS=Vitis quinquangularis GN=PR-1 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.0e-41
Identity = 79/115 (68.70%), Postives = 89/115 (77.39%), Query Frame = 1


Query: 17  AQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAA 76
           AQN+P DYL  HN ARAQVGVGPM W NTVAAYAQ YA++R GDC ++HS GPYGEN+A 
Sbjct: 24  AQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNYAKQRIGDCNLVHSGGPYGENLAR 83

Query: 77  GYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRSSVRLGCARVPC 132
           G  P  TG DAV LW  EK+ YDH SN C+GG+CGHYTQ+VW  SV LGCARV C
Sbjct: 84  G-SPSLTGTDAVNLWVGEKSNYDHNSNSCVGGQCGHYTQVVWSKSVHLGCARVQC 137

[Close]

BLAST of CmoCh04G020920 vs. TrEMBL
Match: A9CSN7_9ROSI (Putative pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=Tam-PR1 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.0e-41
Identity = 78/115 (67.83%), Postives = 91/115 (79.13%), Query Frame = 1


Query: 17  AQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAA 76
           AQN+P DYL  HN ARAQVGVGPM W NTVAAYAQ YA +R GDC ++HS GPYGEN+A 
Sbjct: 24  AQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNYANQRIGDCNLVHSGGPYGENLAW 83

Query: 77  GYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRSSVRLGCARVPC 132
           G  P  TG DAV +W  EK+ YD+ SN C+GG+CGHYTQ+VWR+SVRLGCAR+ C
Sbjct: 84  G-SPSLTGTDAVNMWVGEKSNYDYNSNSCVGGQCGHYTQVVWRNSVRLGCARIQC 137

[Close]

BLAST of CmoCh04G020920 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 151.8 bits (382), Expect = 3.1e-37
Identity = 74/138 (53.62%), Postives = 90/138 (65.22%), Query Frame = 1


Query: 1   MATFMATFIFFLAL------TNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYA 60
           M TF   F+  +A+      TNAQN P DYL  HN ARAQVGV  + W  T+AAYA  Y+
Sbjct: 1   MNTFKTPFLVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYS 60

Query: 61  EKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGG-ECGHY 120
             RK DC ++HS GPYGEN+A G    F+   AVKLW +EK  Y +A N C GG +C HY
Sbjct: 61  NFRKADCNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHY 120

Query: 121 TQMVWRSSVRLGCARVPC 132
           TQ+VWR SV++GCARV C
Sbjct: 121 TQVVWRDSVKIGCARVQC 138

[Close]

BLAST of CmoCh04G020920 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 151.4 bits (381), Expect = 4.1e-37
Identity = 71/131 (54.20%), Postives = 95/131 (72.52%), Query Frame = 1


Query: 1   MATFMATFIFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 60
           +  F+A     +  + AQ++P DYL +HN+AR  VGVGPMQW   VAAYA++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 61  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRS 120
           C +IHS GPYGEN+A G   + +G  AV +W +EKA Y++A+N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 121 SVRLGCARVPC 132
           SVRLGCA+V C
Sbjct: 130 SVRLGCAKVRC 138

[Close]

BLAST of CmoCh04G020920 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.0e-35
Identity = 70/125 (56.00%), Postives = 90/125 (72.00%), Query Frame = 1


Query: 8   FIFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHST 67
           F+  +    AQ++P D+LA+HNRARA+VGVGP++W   VAAYA+ YA +RKGDCAM HS+
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 68  GPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKC-MGGECGHYTQMVWRSSVRLGC 127
           G YGENIA       TG  AV +W +E+  YD+ SN C    +CGHYTQ+VWR+S RLGC
Sbjct: 77  GSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGC 136

Query: 128 ARVPC 132
           A+V C
Sbjct: 137 AKVRC 140

[Close]

BLAST of CmoCh04G020920 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-35
Identity = 66/115 (57.39%), Postives = 86/115 (74.78%), Query Frame = 1


Query: 17  AQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAA 76
           AQ++  DY+  HN+AR+Q+GVGPMQW   +AAYA+ YA + KGDC ++HS GPYGEN+A 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 77  GYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRSSVRLGCARVPC 132
               + +G  AV LW NEKA Y++ +N C  G CGHYTQ+VWR+SVRLGCA+V C
Sbjct: 86  S-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSVRLGCAKVRC 138

[Close]

BLAST of CmoCh04G020920 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 142.9 bits (359), Expect = 1.4e-34
Identity = 69/121 (57.02%), Postives = 83/121 (68.60%), Query Frame = 1


Query: 13  ALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGE 72
           A  N    P + L +HN+ARA VGVGPM W+ T+A YAQ+YA +R  DCAM HS GP+GE
Sbjct: 34  ANANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGE 93

Query: 73  NIAAGYYPEFTGADAVKLWANEKALYDHASNKCMG-GECGHYTQMVWRSSVRLGCARVPC 132
           N+AAG +   +G  A + W  EK  YD+ SN C G G CGHYTQ+VWR SVRLGCA V C
Sbjct: 94  NLAAG-WGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRC 153

[Close]

BLAST of CmoCh04G020920 vs. NCBI nr
Match: gi|700207816|gb|KGN62935.1| (hypothetical protein Csa_2G381130 [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 2.4e-55
Identity = 100/135 (74.07%), Postives = 112/135 (82.96%), Query Frame = 1


Query: 1   MATFMATFIFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 60
           MA F   F FF  LT+AQNAP DY++LHN+ARA VGVGPM W+NTVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPIFTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKND 60

Query: 61  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRS 120
           CA+IHSTGPYGENIA GYYPEFTGAD VK+W  EK LYD+ASN C GG+CGHYTQ+VWR+
Sbjct: 61  CALIHSTGPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPCKANS 136
           SV LGCARV CK  S
Sbjct: 121 SVHLGCARVACKGKS 135

[Close]

BLAST of CmoCh04G020920 vs. NCBI nr
Match: gi|778722387|ref|XP_011658476.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 4.1e-55
Identity = 98/135 (72.59%), Postives = 112/135 (82.96%), Query Frame = 1


Query: 1   MATFMATFIFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 60
           MA    TF+F   LT+AQN+P DY++LHN+ARA VGVGPM W NTVAAYAQ+YA KRK D
Sbjct: 1   MAILFPTFMFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKND 60

Query: 61  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRS 120
           CA++HSTGPYGENIA G+YPEFTGAD VKLW  EK LYD+ASN C GG+CGHYTQ+VWR+
Sbjct: 61  CALVHSTGPYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPCKANS 136
           SV LGCARVPCK  S
Sbjct: 121 SVHLGCARVPCKGKS 135

[Close]

BLAST of CmoCh04G020920 vs. NCBI nr
Match: gi|700193135|gb|KGN48339.1| (hypothetical protein Csa_6G483242 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 2.2e-53
Identity = 94/127 (74.02%), Postives = 108/127 (85.04%), Query Frame = 1


Query: 9   IFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTG 68
           +F   LT+AQN+P DY++LHN+ARA VGVGPM W NTVAAYAQ+YA KRK DCA++HSTG
Sbjct: 1   MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 69  PYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRSSVRLGCAR 128
           PYGENIA G+YPEFTGAD VKLW  EK LYD+ASN C GG+CGHYTQ+VWR+SV LGCAR
Sbjct: 61  PYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCAR 120

Query: 129 VPCKANS 136
           VPCK  S
Sbjct: 121 VPCKGKS 127

[Close]

BLAST of CmoCh04G020920 vs. NCBI nr
Match: gi|659109009|ref|XP_008454501.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 216.1 bits (549), Expect = 3.8e-53
Identity = 96/135 (71.11%), Postives = 113/135 (83.70%), Query Frame = 1


Query: 1   MATFMATFIFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 60
           MA F A+F+F   LT+AQN+P DY+ALHN+ARA VGVGPM W++T+AAYA+AYA +R  D
Sbjct: 1   MAIFFASFMFLFFLTHAQNSPQDYIALHNKARAAVGVGPMTWNSTLAAYAEAYANQRIKD 60

Query: 61  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRS 120
           CA++HS GPYGENIA GYYPEFTGAD VKLW  EK LYD+ASN C GG+CGHYTQ+VWR+
Sbjct: 61  CALVHSKGPYGENIAVGYYPEFTGADGVKLWVAEKRLYDYASNSCKGGDCGHYTQLVWRT 120

Query: 121 SVRLGCARVPCKANS 136
           SVRLGCARV CK  S
Sbjct: 121 SVRLGCARVACKGKS 135

[Close]

BLAST of CmoCh04G020920 vs. NCBI nr
Match: gi|700207817|gb|KGN62936.1| (hypothetical protein Csa_2G381380 [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-52
Identity = 96/135 (71.11%), Postives = 108/135 (80.00%), Query Frame = 1


Query: 1   MATFMATFIFFLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 60
           MA F  TF F   LT AQ +P DY++LHN+ARA V VGPM W+ TVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPTFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKND 60

Query: 61  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKALYDHASNKCMGGECGHYTQMVWRS 120
           CA++HSTGPYGENIA GYYPEFTGAD VKLW  EK LYD+ASN C GG+CGHYTQ+VWR+
Sbjct: 61  CALVHSTGPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPCKANS 136
           SV LGCARV CK  S
Sbjct: 121 SVHLGCARVACKGKS 135

The following BLAST results are available for this feature:

BLAST of CmoCh04G020920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	6.7e-42	62.12	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1_ARATH	7.2e-36	54.20	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]
PR1A_SOLLC	2.1e-35	55.64	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1	[more]
PR1A_TOBAC	1.8e-34	53.44	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR1B_TOBAC	2.3e-34	53.44	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]

BLAST of CmoCh04G020920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLX7_CUCSA	1.7e-55	74.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1	[more]
A0A0A0KHP4_CUCSA	1.6e-53	74.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1	[more]
A0A0A0LSG5_CUCSA	7.7e-53	71.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1	[more]
G1FU08_9ROSI	3.0e-41	68.70	Pathogenesis-related protein OS=Vitis quinquangularis GN=PR-1 PE=2 SV=1	[more]
A9CSN7_9ROSI	3.0e-41	67.83	Putative pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=Tam-PR1 PE=2...	[more]

BLAST of CmoCh04G020920 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50060.1	3.1e-37	53.62	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	4.1e-37	54.20	pathogenesis-related gene 1	[more]
AT4G33720.1	1.0e-35	56.00	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14580.1	1.7e-35	57.39	basic pathogenesis-related protein 1	[more]
AT2G19990.1	1.4e-34	57.02	pathogenesis-related protein-1-like	[more]

BLAST of CmoCh04G020920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207816\|gb\|KGN62935.1\|	2.4e-55	74.07	hypothetical protein Csa_2G381130 [Cucumis sativus]	[more]
gi\|778722387\|ref\|XP_011658476.1\|	4.1e-55	72.59	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|700193135\|gb\|KGN48339.1\|	2.2e-53	74.02	hypothetical protein Csa_6G483242 [Cucumis sativus]	[more]
gi\|659109009\|ref\|XP_008454501.1\|	3.8e-53	71.11	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|700207817\|gb\|KGN62936.1\|	1.1e-52	71.11	hypothetical protein Csa_2G381380 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR002413	V5_allergen
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050896	response to stimulus
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G020920.1	CmoCh04G020920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 110..126 score: 1.3E-11coord: 87..100 score: 1.3E-11coord: 40..58 score: 1.3
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..132 score: 1.3
IPR002413	Ves allergen	PRINTS	PR00838	V5ALLERGEN	coord: 109..128 score: 6.5E-7coord: 85..100 score: 6.5E-7coord: 40..58 score: 6.
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 23..133 score: 6.0
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 25..134 score: 6.6
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 19..135 score: 1.3
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 12..133 score: 4.32
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 111..121 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..132 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G020920	CmaCh04G020300	Cucurbita maxima (Rimu)	cmacmoB741
CmoCh04G020920	Cp4.1LG01g17570	Cucurbita pepo (Zucchini)	cmocpeB680
CmoCh04G020920	Cp4.1LG01g17800	Cucurbita pepo (Zucchini)	cmocpeB685

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G020920	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G020920	Cucurbita pepo (Zucchini)	cmocpeB682