CmaCh04G020300 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G020300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Location	Cma_Chr04 : 12944084 .. 12945412 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTTTCATTGCCACTTTCATGTTCCTCCTCGTCCTAACTAATGCTCAAAACGCCCCCGGTGACTACCTCGTGCTTCACAACCGCGCTCGAGCCCAGGTTGGCGTCGGCCCCATGCAATGGAGCAAAACTGTGGCCGCGTACGCTCAAGCCTATGCGAAAAAAAGAAAGGGTGACTCCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACCGGGGCAAATGCGGTGAAGTTATGGGCGAACGAGAAGCCGCTGTATGATCATGCGTCGAATAAATGCTTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTACGATCCTCCTGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTTCAAAGAGATTTGGTTTTAAAAATTTTATGAATGGTAATAAAGTTTGTGAGAGAATCATGAATTTATGAATTGAAATAAAGTTATGATATTGTCTATAATAGTATTATATTGTCCGGTTTAAGTTAACTCTTGTGACTTTGTTTTGACCTCCTTGAGTTAACTCTTGTGACTTGGTTTTGACCTCTTTGCTCGTAAACCCATGTTCATAGAGTCTCCCCTCTAATTAAGTACATCACAGAGCCACCCCTGAAGCTCGTAGATTTCTAGAACAACCTTCCGTTAATCGAGGCTCGACTACTTTCTTTGGAGCCATTAAACAAAATACACCCTTTGTTCGACACTTTTGACTACAAATTGGAGGCTAACAATTTCTTTGTTCGACATAGCTCAGTTAAGTTCATGGTCTGATAACCATGTTAAGAATCACGAATCTCTACAATGGTATATGATATTTGTCCACTTTAAACATGAGAAAATCTCATAGGTTTGCTTCAGGCTCCGGAAGATGTATTCTTTACTTATAAATCTACGATCATTTCCAAACAATCTTCAATACTAAGAACACCAGCCACCAGCCAATTCCTGTTCCAAGTCACCCGGAAGAAATGCCCTCAGCAGAGATGCGAAAAATCAGTCCACGATGTTTTCCGCCTCCAAATCGAGAGATGCACGGCGGCGTTTAACTCCACTGCACTATGAGACCCACATCGGAGACGAAGGCCCACTGCCGCAACCTAAACTTTGAAAAAAAACATACATATTCCTAAACTTTGAAAACAGTAGGATACGAAAATGTTTAACCATTTGTTATTTTAAAATGGTGTAATAAGTCTCCAAATTTTAAAAAATTAA

mRNA sequence

ATGGCTGTTTTCATTGCCACTTTCATGTTCCTCCTCGTCCTAACTAATGCTCAAAACGCCCCCGGTGACTACCTCGTGCTTCACAACCGCGCTCGAGCCCAGGTTGGCGTCGGCCCCATGCAATGGAGCAAAACTGTGGCCGCGTACGCTCAAGCCTATGCGAAAAAAAGAAAGGGTGACTCCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACCGGGGCAAATGCGGTGAAGTTATGGGCGAACGAGAAGCCGCTGTATGATCATGCGTCGAATAAATGCTTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGCAAGGCTAATTCTCATCTCCAAATTTTAAAAAATTAA

Coding sequence (CDS)

ATGGCTGTTTTCATTGCCACTTTCATGTTCCTCCTCGTCCTAACTAATGCTCAAAACGCCCCCGGTGACTACCTCGTGCTTCACAACCGCGCTCGAGCCCAGGTTGGCGTCGGCCCCATGCAATGGAGCAAAACTGTGGCCGCGTACGCTCAAGCCTATGCGAAAAAAAGAAAGGGTGACTCCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACCGGGGCAAATGCGGTGAAGTTATGGGCGAACGAGAAGCCGCTGTATGATCATGCGTCGAATAAATGCTTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGCAAGGCTAATTCTCATCTCCAAATTTTAAAAAATTAA

Protein sequence

MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRSSVRLGCARVPCKANSHLQILKN

Homology

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BLAST of CmaCh04G020300 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 8.7e-40
Identity = 80/129 (62.02%), Postives = 95/129 (73.64%), Query Frame = 1


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           +A FI TF  L+  + AQN+P DYL  HN AR QVGVGPM W   +AAYAQ YA +R GD
Sbjct: 8   VACFI-TFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGD 67

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
             MIHS GPYGEN+AA  +P+   A AVK+W +EK  YD+ SN C+GG CGHYTQ+VWR+
Sbjct: 68  CGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRN 127

Query: 121 SVRLGCARV 130
           SVRLGCARV
Sbjct: 128 SVRLGCARV 134

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BLAST of CmaCh04G020300 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.9e-35
Identity = 70/131 (53.44%), Postives = 98/131 (74.81%), Query Frame = 1


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           + VF+A    L++ + AQ++P DYL +HN+AR  VGVGPMQW + VAAYA++YA++ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
             +IHS GPYGEN+A G   + +G +AV +W +EK  Y++A+N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 121 SVRLGCARVPC 132
           SVRLGCA+V C
Sbjct: 130 SVRLGCAKVRC 138

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BLAST of CmaCh04G020300 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.2e-34
Identity = 71/135 (52.59%), Postives = 92/135 (68.15%), Query Frame = 1


Query: 2   AVFIATFMFLLVL--TNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKG 61
           ++F+A F+  ++   + AQ    ++L  HN AR +VGVGPM W   +AAYAQ YA +R  
Sbjct: 4   SIFVACFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRAD 63

Query: 62  DSAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGE-CGHYTQMVW 121
           D  MIHS GPYGEN+AA  +P+   A AVK+W +EK  YD+ SN C  G+ CGHYTQ+VW
Sbjct: 64  DCGMIHSDGPYGENLAAA-FPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVW 123

Query: 122 RSSVRLGCARVPCKA 134
           R SVRLGCARV C +
Sbjct: 124 RKSVRLGCARVRCNS 137

[Close]

BLAST of CmaCh04G020300 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.5e-33
Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 1


Query: 3   VFIATFMFLLVLTN---AQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKG 62
           + ++T +  LV+++   AQN+  DYL  HN ARA VGV P+ W   VAAYAQ YA +   
Sbjct: 13  LLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 72

Query: 63  DSAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGE-CGHYTQMVW 122
           D  ++HS G YGEN+A G     T A AV++W +EK  YDH SN C  G+ CGHYTQ+VW
Sbjct: 73  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

Query: 123 RSSVRLGCARVPCKANSHL 138
           R+SVR+GCARV C    ++
Sbjct: 133 RNSVRVGCARVQCNNGGYV 151

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BLAST of CmaCh04G020300 vs. Swiss-Prot
Match: PR04_SOLLC (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 7.9e-33
Identity = 68/116 (58.62%), Postives = 86/116 (74.14%), Query Frame = 1


Query: 17  AQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMIHSTGPYGENIAA 76
           AQN+P DYL +HN ARAQVGVGPM W   +A+ AQ YA  R GD  +IHS    GEN+A 
Sbjct: 24  AQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAK 83

Query: 77  GYYPEFTGANAVKLWANEKPLYDHASNKCLGGE-CGHYTQMVWRSSVRLGCARVPC 132
           G   +FTG  AV+LW +E+P Y++A+N+C+GG+ CGHYTQ+VWR+SVRLGC R  C
Sbjct: 84  G-GGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVWRNSVRLGCGRARC 136

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BLAST of CmaCh04G020300 vs. TrEMBL
Match: A0A0A0LSG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.4e-52
Identity = 96/139 (69.06%), Postives = 110/139 (79.14%), Query Frame = 1


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           MA+F  TF FL  LT AQ +P DY+ LHN+ARA V VGPM W+KTVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPTFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKND 60

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            A++HSTGPYGENIA GYYPEFTGA+ VKLW  EK LYD+ASN C GG+CGHYTQ+VWR+
Sbjct: 61  CALVHSTGPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPCKANSHLQI 140
           SV LGCARV CK  S   +
Sbjct: 121 SVHLGCARVACKGKSQFVV 139

[Close]

BLAST of CmaCh04G020300 vs. TrEMBL
Match: A0A0A0LLX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.4e-52
Identity = 96/135 (71.11%), Postives = 109/135 (80.74%), Query Frame = 1


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           MA+F   F F   LT+AQNAP DY+ LHN+ARA VGVGPM W+ TVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPIFTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKND 60

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            A+IHSTGPYGENIA GYYPEFTGA+ VK+W  EK LYD+ASN C GG+CGHYTQ+VWR+
Sbjct: 61  CALIHSTGPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPCKANS 136
           SV LGCARV CK  S
Sbjct: 121 SVHLGCARVACKGKS 135

[Close]

BLAST of CmaCh04G020300 vs. TrEMBL
Match: A0A0A0KHP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.0e-52
Identity = 94/131 (71.76%), Postives = 108/131 (82.44%), Query Frame = 1


Query: 9   MFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMIHSTG 68
           MFL VLT+AQN+P DY+ LHN+ARA VGVGPM W  TVAAYAQ+YA KRK D A++HSTG
Sbjct: 1   MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 69  PYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRSSVRLGCAR 128
           PYGENIA G+YPEFTGA+ VKLW  EK LYD+ASN C GG+CGHYTQ+VWR+SV LGCAR
Sbjct: 61  PYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCAR 120

Query: 129 VPCKANSHLQI 140
           VPCK  S   +
Sbjct: 121 VPCKGKSQFVV 131

[Close]

BLAST of CmaCh04G020300 vs. TrEMBL
Match: E2GEV9_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.0e-39
Identity = 77/115 (66.96%), Postives = 90/115 (78.26%), Query Frame = 1


Query: 17  AQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMIHSTGPYGENIAA 76
           AQN+P DY+  HN ARAQVGVGPM W+ TVAAYAQ YA +R GD  ++HS GPYGENIA 
Sbjct: 25  AQNSPQDYVDAHNAARAQVGVGPMTWNNTVAAYAQNYANQRIGDCNLVHSGGPYGENIAW 84

Query: 77  GYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRSSVRLGCARVPC 132
           G  P  TG +AV +W  EKP YD+ SN C+GG+CGHYTQ+VWR+SVRLGCARV C
Sbjct: 85  G-SPSLTGTDAVNMWVGEKPNYDYNSNSCVGGKCGHYTQVVWRNSVRLGCARVQC 138

[Close]

BLAST of CmaCh04G020300 vs. TrEMBL
Match: G1FU08_9ROSI (Pathogenesis-related protein OS=Vitis quinquangularis GN=PR-1 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.7e-39
Identity = 77/115 (66.96%), Postives = 86/115 (74.78%), Query Frame = 1


Query: 17  AQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMIHSTGPYGENIAA 76
           AQN+P DYL  HN ARAQVGVGPM W  TVAAYAQ YAK+R GD  ++HS GPYGEN+A 
Sbjct: 24  AQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNYAKQRIGDCNLVHSGGPYGENLAR 83

Query: 77  GYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRSSVRLGCARVPC 132
           G  P  TG +AV LW  EK  YDH SN C+GG+CGHYTQ+VW  SV LGCARV C
Sbjct: 84  G-SPSLTGTDAVNLWVGEKSNYDHNSNSCVGGQCGHYTQVVWSKSVHLGCARVQC 137

[Close]

BLAST of CmaCh04G020300 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 153.7 bits (387), Expect = 8.6e-38
Identity = 73/128 (57.03%), Postives = 88/128 (68.75%), Query Frame = 1


Query: 5   IATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMI 64
           I    FL+V TNAQN P DYL  HN ARAQVGV  + W  T+AAYA  Y+  RK D  ++
Sbjct: 11  IVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLV 70

Query: 65  HSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGG-ECGHYTQMVWRSSVR 124
           HS GPYGEN+A G    F+  +AVKLW +EKP Y +A N C GG +C HYTQ+VWR SV+
Sbjct: 71  HSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVK 130

Query: 125 LGCARVPC 132
           +GCARV C
Sbjct: 131 IGCARVQC 138

[Close]

BLAST of CmaCh04G020300 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 148.7 bits (374), Expect = 2.8e-36
Identity = 70/131 (53.44%), Postives = 98/131 (74.81%), Query Frame = 1


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           + VF+A    L++ + AQ++P DYL +HN+AR  VGVGPMQW + VAAYA++YA++ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
             +IHS GPYGEN+A G   + +G +AV +W +EK  Y++A+N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 121 SVRLGCARVPC 132
           SVRLGCA+V C
Sbjct: 130 SVRLGCAKVRC 138

[Close]

BLAST of CmaCh04G020300 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 144.1 bits (362), Expect = 6.8e-35
Identity = 71/128 (55.47%), Postives = 92/128 (71.88%), Query Frame = 1


Query: 5   IATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMI 64
           I  F+ L+V   AQ++P D+L +HNRARA+VGVGP++W + VAAYA+ YA +RKGD AM 
Sbjct: 14  ITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMK 73

Query: 65  HSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCL-GGECGHYTQMVWRSSVR 124
           HS+G YGENIA       TG  AV +W +E+  YD+ SN C    +CGHYTQ+VWR+S R
Sbjct: 74  HSSGSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSER 133

Query: 125 LGCARVPC 132
           LGCA+V C
Sbjct: 134 LGCAKVRC 140

[Close]

BLAST of CmaCh04G020300 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 142.9 bits (359), Expect = 1.5e-34
Identity = 68/126 (53.97%), Postives = 88/126 (69.84%), Query Frame = 1


Query: 16  NAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMIHSTGPYGENIA 75
           N    P + LV+HN+ARA VGVGPM W++T+A YAQ+YA +R  D AM HS GP+GEN+A
Sbjct: 37  NGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLA 96

Query: 76  AGYYPEFTGANAVKLWANEKPLYDHASNKCLG-GECGHYTQMVWRSSVRLGCARVPCKAN 135
           AG +   +G  A + W  EK  YD+ SN C G G CGHYTQ+VWR SVRLGCA V CK +
Sbjct: 97  AG-WGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKND 156

Query: 136 SHLQIL 141
            ++ ++
Sbjct: 157 EYIWVI 161

[Close]

BLAST of CmaCh04G020300 vs. TAIR10
Match: AT1G50050.1 (AT1G50050.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 141.0 bits (354), Expect = 5.8e-34
Identity = 71/131 (54.20%), Postives = 87/131 (66.41%), Query Frame = 1


Query: 3   VFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSA 62
           + I    FL++ TNAQNA  DYL  HN ARAQVGV  + W   VAAYA  YA  RK D +
Sbjct: 9   LIIVAISFLVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCS 68

Query: 63  MIHST-GPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGG-ECGHYTQMVWRS 122
           +  ST G YGEN+A G    FTG  AV LW NEKP Y++ +N C+G  +C HYTQ+VW +
Sbjct: 69  LTPSTGGSYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQVVWSN 128

Query: 123 SVRLGCARVPC 132
           SV++GCARV C
Sbjct: 129 SVKIGCARVLC 139

[Close]

BLAST of CmaCh04G020300 vs. NCBI nr
Match: gi|778722387|ref|XP_011658476.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 3.6e-54
Identity = 98/139 (70.50%), Postives = 113/139 (81.29%), Query Frame = 1


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           MA+   TFMFL VLT+AQN+P DY+ LHN+ARA VGVGPM W  TVAAYAQ+YA KRK D
Sbjct: 1   MAILFPTFMFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKND 60

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            A++HSTGPYGENIA G+YPEFTGA+ VKLW  EK LYD+ASN C GG+CGHYTQ+VWR+
Sbjct: 61  CALVHSTGPYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPCKANSHLQI 140
           SV LGCARVPCK  S   +
Sbjct: 121 SVHLGCARVPCKGKSQFVV 139

[Close]

BLAST of CmaCh04G020300 vs. NCBI nr
Match: gi|700207817|gb|KGN62936.1| (hypothetical protein Csa_2G381380 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 3.4e-52
Identity = 96/139 (69.06%), Postives = 110/139 (79.14%), Query Frame = 1


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           MA+F  TF FL  LT AQ +P DY+ LHN+ARA V VGPM W+KTVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPTFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKND 60

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            A++HSTGPYGENIA GYYPEFTGA+ VKLW  EK LYD+ASN C GG+CGHYTQ+VWR+
Sbjct: 61  CALVHSTGPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPCKANSHLQI 140
           SV LGCARV CK  S   +
Sbjct: 121 SVHLGCARVACKGKSQFVV 139

[Close]

BLAST of CmaCh04G020300 vs. NCBI nr
Match: gi|659109009|ref|XP_008454501.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 3.4e-52
Identity = 95/139 (68.35%), Postives = 113/139 (81.29%), Query Frame = 1


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           MA+F A+FMFL  LT+AQN+P DY+ LHN+ARA VGVGPM W+ T+AAYA+AYA +R  D
Sbjct: 1   MAIFFASFMFLFFLTHAQNSPQDYIALHNKARAAVGVGPMTWNSTLAAYAEAYANQRIKD 60

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            A++HS GPYGENIA GYYPEFTGA+ VKLW  EK LYD+ASN C GG+CGHYTQ+VWR+
Sbjct: 61  CALVHSKGPYGENIAVGYYPEFTGADGVKLWVAEKRLYDYASNSCKGGDCGHYTQLVWRT 120

Query: 121 SVRLGCARVPCKANSHLQI 140
           SVRLGCARV CK  S   +
Sbjct: 121 SVRLGCARVACKGKSQFVV 139

[Close]

BLAST of CmaCh04G020300 vs. NCBI nr
Match: gi|700207816|gb|KGN62935.1| (hypothetical protein Csa_2G381130 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 3.4e-52
Identity = 96/135 (71.11%), Postives = 109/135 (80.74%), Query Frame = 1


Query: 1   MAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGD 60
           MA+F   F F   LT+AQNAP DY+ LHN+ARA VGVGPM W+ TVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPIFTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKND 60

Query: 61  SAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRS 120
            A+IHSTGPYGENIA GYYPEFTGA+ VK+W  EK LYD+ASN C GG+CGHYTQ+VWR+
Sbjct: 61  CALIHSTGPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPCKANS 136
           SV LGCARV CK  S
Sbjct: 121 SVHLGCARVACKGKS 135

[Close]

BLAST of CmaCh04G020300 vs. NCBI nr
Match: gi|700193135|gb|KGN48339.1| (hypothetical protein Csa_6G483242 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 5.8e-52
Identity = 94/131 (71.76%), Postives = 108/131 (82.44%), Query Frame = 1


Query: 9   MFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQAYAKKRKGDSAMIHSTG 68
           MFL VLT+AQN+P DY+ LHN+ARA VGVGPM W  TVAAYAQ+YA KRK D A++HSTG
Sbjct: 1   MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 69  PYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGHYTQMVWRSSVRLGCAR 128
           PYGENIA G+YPEFTGA+ VKLW  EK LYD+ASN C GG+CGHYTQ+VWR+SV LGCAR
Sbjct: 61  PYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCAR 120

Query: 129 VPCKANSHLQI 140
           VPCK  S   +
Sbjct: 121 VPCKGKSQFVV 131

The following BLAST results are available for this feature:

BLAST of CmaCh04G020300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	8.7e-40	62.02	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1_ARATH	4.9e-35	53.44	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]
PR1A_SOLLC	4.2e-34	52.59	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1	[more]
PR1A_TOBAC	3.5e-33	49.64	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR04_SOLLC	7.9e-33	58.62	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1	[more]

BLAST of CmaCh04G020300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSG5_CUCSA	2.4e-52	69.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1	[more]
A0A0A0LLX7_CUCSA	2.4e-52	71.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1	[more]
A0A0A0KHP4_CUCSA	4.0e-52	71.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1	[more]
E2GEV9_9ROSI	3.0e-39	66.96	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]
G1FU08_9ROSI	6.7e-39	66.96	Pathogenesis-related protein OS=Vitis quinquangularis GN=PR-1 PE=2 SV=1	[more]

BLAST of CmaCh04G020300 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50060.1	8.6e-38	57.03	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	2.8e-36	53.44	pathogenesis-related gene 1	[more]
AT4G33720.1	6.8e-35	55.47	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G19990.1	1.5e-34	53.97	pathogenesis-related protein-1-like	[more]
AT1G50050.1	5.8e-34	54.20	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]

BLAST of CmaCh04G020300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722387\|ref\|XP_011658476.1\|	3.6e-54	70.50	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|700207817\|gb\|KGN62936.1\|	3.4e-52	69.06	hypothetical protein Csa_2G381380 [Cucumis sativus]	[more]
gi\|659109009\|ref\|XP_008454501.1\|	3.4e-52	68.35	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|700207816\|gb\|KGN62935.1\|	3.4e-52	71.11	hypothetical protein Csa_2G381130 [Cucumis sativus]	[more]
gi\|700193135\|gb\|KGN48339.1\|	5.8e-52	71.76	hypothetical protein Csa_6G483242 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR002413	V5_allergen
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050896	response to stimulus
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020300.1	CmaCh04G020300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 40..58 score: 2.1E-11coord: 110..126 score: 2.1E-11coord: 87..100 score: 2.1
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 3..132 score: 2.5
IPR002413	Ves allergen	PRINTS	PR00838	V5ALLERGEN	coord: 40..58 score: 8.6E-7coord: 109..128 score: 8.6E-7coord: 85..100 score: 8.
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 23..134 score: 1.5
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 27..135 score: 3.5
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 19..142 score: 1.4
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 12..135 score: 5.89
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 111..121 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 3..132 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G020300	CmoCh04G020920	Cucurbita moschata (Rifu)	cmacmoB741
CmaCh04G020300	Cp4.1LG01g17570	Cucurbita pepo (Zucchini)	cmacpeB721

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G020300	Wax gourd	cmawgoB0908
CmaCh04G020300	Cucurbita moschata (Rifu)	cmacmoB698
CmaCh04G020300	Cucurbita moschata (Rifu)	cmacmoB729
CmaCh04G020300	Wild cucumber (PI 183967)	cmacpiB753
CmaCh04G020300	Cucumber (Chinese Long) v2	cmacuB744
CmaCh04G020300	Melon (DHL92) v3.5.1	cmameB632
CmaCh04G020300	Watermelon (Charleston Gray)	cmawcgB648
CmaCh04G020300	Watermelon (97103) v1	cmawmB674
CmaCh04G020300	Bottle gourd (USVL1VR-Ls)	cmalsiB623
CmaCh04G020300	Bottle gourd (USVL1VR-Ls)	cmalsiB683
CmaCh04G020300	Cucumber (Gy14) v2	cgybcmaB657
CmaCh04G020300	Cucumber (Gy14) v2	cgybcmaB663
CmaCh04G020300	Melon (DHL92) v3.6.1	cmamedB717
CmaCh04G020300	Melon (DHL92) v3.6.1	cmamedB747
CmaCh04G020300	Cucumber (Chinese Long) v3	cmacucB0877
CmaCh04G020300	Watermelon (97103) v2	cmawmbB750
CmaCh04G020300	Watermelon (97103) v2	cmawmbB768